Rmu_sc0000177.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000177.1
OG0000087
Physical Location & Seq
Reverse (-)
8553 .. 11522
2970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000177.1_g000003.1.cds

Sequence Viewer

Length: 1569 bp
atggccgtcccttcgccttccaaggcttcgagaaatgggggaatgtgtgggacacgtgtagcgatcctatggctgagggcttttcgaagctcagaagacttggaagatttgcagcgaggagaaagggagagccaagggagaagtgtgcgtgcctatggagtgatagatcgaccgtctgccgaaggaaagggagaagacgccatccacatcaacgtcgacctagggtcgaagggtacgagtcggtcaattgaagaaacccttctggagatcaccgacgagggatatggtgaacctgaccccgacgcgcccgtgacccacgtcgcgcagccctccatggcctatgttataatgatagatgacaccgggatgggaaagtaccggccccggtgcctatctcctctcgttccactgggagcgatgaggctctactccccggtgagaagaagagatcataggctagggagaagacgccatccacatcaacgtcgacctagggtcgaagggtacgagtcgccctccatggcctatgttataatgatagatgacaccgggatgggaaaagtaccggccccggtgcctatctcctctcgttccactgggagccatgaggctctactccccggtgagaagaagagatgccataggcaccggcatcgaaccgataagaaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcaccttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgacgaaaagttcgtgtggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgggccaaggataatactccccaggagaatcaccgtcttgcccgggaatcaatgatgcgggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggacgcattgagggcggagctggccgcctctaagcagcggatcgcggggcttgagggcgaagttgctgagcaccgtcttgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgatgccagcgaggaggatactcatctgaatgaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggacgcattgagggcggagctggccgcctctaagcagcggatcgcggggcttgagggcgaagttgctgaggcccgggaagaggagaaggcaaaccaccaggaggattgcctgcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatctctatgatggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggtcggatacttagatgaagataaattcatgaggggtcttctggagaaaaagaagaaggatcgggaggcggcggccaagtttggtgccggtgggtcgcagagtaccggtggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

522

Amino Acids

58.23

Weight (kDa)

8.4

Isoelectric Point (pI)

49.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 347, 533
AarI CACCTGC 1 cut(s) 1165
Acc36I ACCTGC 1 cut(s) 1165
AccB1I GGYRCC 4 cut(s) 387, 574, 645, 1529
AccBSI CCGCTC 2 cut(s) 994, 1219
AccI GTMKAC 2 cut(s) 216, 487
AccII CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
AclWI GGATC 5 cut(s) 58, 870, 1043, 1268, 1512
AcoI YGGCCR 5 cut(s) 3, 682, 1017, 1242, 1518
AcsI RAATTY 1 cut(s) 1469
AcuI CTGAAG 1 cut(s) 887
AcvI CACGTG 1 cut(s) 56
AcyI GRCGYC 2 cut(s) 198, 469
AfiI CCNNNNNNNGG 9 cut(s) 755, 858, 886, 892, 1300, 1321, 1336, 1341, 1411
AflIII ACRYGT 2 cut(s) 53, 55
AgeI ACCGGT 1 cut(s) 1550
AgsI TTSAA 3 cut(s) 251, 1105, 1432
AhdI GACNNNNNGTC 2 cut(s) 223, 494
AjiI CACGTC 1 cut(s) 319
AjnI CCWGG 2 cut(s) 912, 1317
AluBI AGCT 7 cut(s) 90, 808, 982, 1015, 1207, 1240, 1381
AluI AGCT 7 cut(s) 90, 808, 982, 1015, 1207, 1240, 1381
Alw21I GWGCWC 2 cut(s) 1068, 1383
AlwI GGATC 5 cut(s) 58, 870, 1043, 1268, 1512
AlwNI CAGNNNCTG 1 cut(s) 811
Ama87I CYCGRG 4 cut(s) 730, 933, 1077, 1293
ApeKI GCWGC 8 cut(s) 112, 325, 805, 808, 1030, 1255, 1397, 1400
ApoI RAATTY 1 cut(s) 1469
ArsI GACNNNNNNTTYG 2 cut(s) 824, 856
AsiGI ACCGGT 1 cut(s) 1550
Asp700I GAANNNNTTC 1 cut(s) 258
AspA2I CCTAGG 2 cut(s) 220, 491
AspLEI GCGC 2 cut(s) 307, 325
AspS9I GGNCC 6 cut(s) 381, 568, 734, 849, 894, 1291
AsuII TTCGAA 1 cut(s) 85
AvaI CYCGRG 4 cut(s) 730, 933, 1077, 1293
AvaII GGWCC 2 cut(s) 734, 849
AvrII CCTAGG 2 cut(s) 220, 491
BaeGI GKGCMC 1 cut(s) 1099
BanI GGYRCC 4 cut(s) 387, 574, 645, 1529
BanII GRGCYC 1 cut(s) 1383
BarI GAAGNNNNNNTAC 2 cut(s) 659, 691
BauI CACGAG 1 cut(s) 1346
BbrPI CACGTG 1 cut(s) 56
BbsI GAAGAC 4 cut(s) 102, 201, 472, 1475
Bbv12I GWGCWC 2 cut(s) 1068, 1383
BbvCI CCTCAGC 2 cut(s) 74, 1287
BbvI GCAGC 8 cut(s) 124, 337, 795, 817, 1042, 1267, 1384, 1387
BccI CCATC 6 cut(s) 209, 361, 480, 547, 806, 1387
BceAI ACGGC 1 cut(s) 1337
BcgI CGANNNNNNTGC 2 cut(s) 635, 669
BciT130I CCWGG 2 cut(s) 914, 1319
BciVI GTATCC 2 cut(s) 1129, 1445
BfaI CTAG 3 cut(s) 221, 458, 492
BfuAI ACCTGC 1 cut(s) 1165
BfuI GTATCC 2 cut(s) 1129, 1445
BlnI CCTAGG 2 cut(s) 220, 491
BlpI GCTNAGC 1 cut(s) 1062
Bme18I GGWCC 2 cut(s) 734, 849
BmeRI GACNNNNNGTC 2 cut(s) 223, 494
BmeT110I CYCGRG 4 cut(s) 730, 933, 1077, 1293
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 6 cut(s) 381, 568, 734, 849, 894, 1291
BmiI GGNNCC 8 cut(s) 383, 389, 570, 576, 602, 647, 735, 1531
BmrI ACTGGG 2 cut(s) 419, 606
BmsI GCATC 5 cut(s) 626, 661, 936, 1080, 1111
BmuI ACTGGG 2 cut(s) 419, 606
BoxI GACNNNNGTC 2 cut(s) 317, 739
BpiI GAAGAC 4 cut(s) 102, 201, 472, 1475
BplI GAGNNNNNCTC 4 cut(s) 500, 532, 1370, 1402
BpmI CTGGAG 4 cut(s) 284, 1004, 1229, 1508
Bpu10I CCTNAGC 2 cut(s) 74, 1287
Bpu1102I GCTNAGC 1 cut(s) 1062
Bpu14I TTCGAA 1 cut(s) 85
BpuEI CTTGAG 2 cut(s) 1067, 1292
BsaAI YACGTR 1 cut(s) 56
BsaBI GATNNNNATC 1 cut(s) 1140
BsaHI GRCGYC 2 cut(s) 198, 469
BsaWI WCCGGW 2 cut(s) 778, 1550
BsaXI ACNNNNNCTCC 2 cut(s) 1352, 1382
Bsc4I CCNNNNNNNGG 9 cut(s) 755, 858, 886, 892, 1300, 1321, 1336, 1341, 1411
Bse118I RCCGGY 5 cut(s) 378, 565, 648, 1532, 1550
Bse1I ACTGG 4 cut(s) 414, 601, 685, 706
Bse8I GATNNNNATC 1 cut(s) 1140
BseBI CCWGG 2 cut(s) 914, 1319
BseGI GGATG 5 cut(s) 201, 372, 472, 558, 694
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 9 cut(s) 755, 858, 886, 892, 1300, 1321, 1336, 1341, 1411
BseMII CTCAG 5 cut(s) 65, 105, 803, 1053, 1278
BseNI ACTGG 4 cut(s) 414, 601, 685, 706
BseRI GAGGAG 7 cut(s) 132, 387, 574, 1145, 1166, 1316, 1373
BseSI GKGCMC 1 cut(s) 1099
BseXI GCAGC 8 cut(s) 124, 337, 795, 817, 1042, 1267, 1384, 1387
Bsh1236I CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
Bsh1285I CGRYCG 3 cut(s) 173, 886, 1449
BshNI GGYRCC 4 cut(s) 387, 574, 645, 1529
BshTI ACCGGT 1 cut(s) 1550
BsiEI CGRYCG 3 cut(s) 173, 886, 1449
BsiHKAI GWGCWC 2 cut(s) 1068, 1383
BsiHKCI CYCGRG 4 cut(s) 730, 933, 1077, 1293
BslFI GGGAC 4 cut(s) 64, 747, 1010, 1235
BslI CCNNNNNNNGG 9 cut(s) 755, 858, 886, 892, 1300, 1321, 1336, 1341, 1411
BsmFI GGGAC 4 cut(s) 64, 747, 1010, 1235
BsoBI CYCGRG 4 cut(s) 730, 933, 1077, 1293
Bsp119I TTCGAA 1 cut(s) 85
Bsp1286I GDGCHC 3 cut(s) 1068, 1099, 1383
Bsp1720I GCTNAGC 1 cut(s) 1062
Bsp19I CCATGG 2 cut(s) 333, 519
BspCNI CTCAG 5 cut(s) 66, 104, 804, 1054, 1279
BspFNI CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
BspHI TCATGA 2 cut(s) 1422, 1473
BspLI GGNNCC 8 cut(s) 383, 389, 570, 576, 602, 647, 735, 1531
BspMI ACCTGC 1 cut(s) 1165
BspPI GGATC 5 cut(s) 58, 870, 1043, 1268, 1512
BspQI GCTCTTC 1 cut(s) 1371
BspT104I TTCGAA 1 cut(s) 85
BspT107I GGYRCC 4 cut(s) 387, 574, 645, 1529
BsrBI CCGCTC 2 cut(s) 994, 1219
BsrFI RCCGGY 5 cut(s) 378, 565, 648, 1532, 1550
BsrI ACTGG 4 cut(s) 414, 601, 685, 706
BssAI RCCGGY 5 cut(s) 378, 565, 648, 1532, 1550
BssNI GRCGYC 2 cut(s) 198, 469
BssSI CACGAG 1 cut(s) 1346
BssT1I CCWWGG 8 cut(s) 21, 133, 220, 333, 491, 519, 694, 897
Bst2BI CACGAG 1 cut(s) 1346
Bst2UI CCWGG 2 cut(s) 914, 1319
Bst4CI ACNGT 3 cut(s) 174, 926, 1070
Bst6I CTCTTC 6 cut(s) 439, 626, 704, 1106, 1293, 1371
BstACI GRCGYC 2 cut(s) 198, 469
BstBAI YACGTR 1 cut(s) 56
BstBI TTCGAA 1 cut(s) 85
BstC8I GCNNGC 7 cut(s) 150, 1017, 1095, 1126, 1242, 1331, 1335
BstDEI CTNAG 8 cut(s) 74, 91, 812, 1026, 1062, 1251, 1287, 1456
BstDSI CCRYGG 4 cut(s) 333, 519, 1335, 1353
BstF5I GGATG 5 cut(s) 201, 372, 472, 558, 694
BstFNI CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
BstHHI GCGC 2 cut(s) 307, 325
BstMCI CGRYCG 3 cut(s) 173, 886, 1449
BstMWI GCNNNNNNNGC 6 cut(s) 802, 1007, 1016, 1121, 1232, 1241
BstNI CCWGG 2 cut(s) 914, 1319
BstPAI GACNNNNGTC 2 cut(s) 317, 739
BstSLI GKGCMC 1 cut(s) 1099
BstUI CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
BstV1I GCAGC 8 cut(s) 124, 337, 795, 817, 1042, 1267, 1384, 1387
BstV2I GAAGAC 4 cut(s) 102, 201, 472, 1475
BstX2I RGATCY 1 cut(s) 862
BstXI CCANNNNNNTGG 1 cut(s) 701
BstYI RGATCY 1 cut(s) 862
BsuI GTATCC 2 cut(s) 1129, 1445
BtgI CCRYGG 4 cut(s) 333, 519, 1335, 1353
BtgZI GCGATG 1 cut(s) 431
BtrI CACGTC 1 cut(s) 319
BtsCI GGATG 5 cut(s) 201, 372, 472, 558, 694
BtsIMutI CAGTG 3 cut(s) 407, 594, 678
BveI ACCTGC 1 cut(s) 1165
Cac8I GCNNGC 7 cut(s) 150, 1017, 1095, 1126, 1242, 1331, 1335
CaiI CAGNNNCTG 1 cut(s) 811
CciI TCATGA 2 cut(s) 1422, 1473
CfoI GCGC 2 cut(s) 307, 325
Cfr10I RCCGGY 5 cut(s) 378, 565, 648, 1532, 1550
Cfr13I GGNCC 6 cut(s) 381, 568, 734, 849, 894, 1291
Cfr42I CCGCGG 1 cut(s) 1338
Cfr9I CCCGGG 4 cut(s) 730, 933, 1077, 1293
CseI GACGC 5 cut(s) 206, 311, 477, 1007, 1232
CspAI ACCGGT 1 cut(s) 1550
CviAII CATG 8 cut(s) 334, 520, 605, 853, 965, 1190, 1423, 1474
DdeI CTNAG 8 cut(s) 74, 91, 812, 1026, 1062, 1251, 1287, 1456
DriI GACNNNNNGTC 2 cut(s) 223, 494
EaeI YGGCCR 5 cut(s) 3, 682, 1017, 1242, 1518
Eam1104I CTCTTC 6 cut(s) 439, 626, 704, 1106, 1293, 1371
Eam1105I GACNNNNNGTC 2 cut(s) 223, 494
EarI CTCTTC 6 cut(s) 439, 626, 704, 1106, 1293, 1371
EciI GGCGGA 2 cut(s) 1025, 1250
Ecl136II GAGCTC 1 cut(s) 1381
Eco130I CCWWGG 8 cut(s) 21, 133, 220, 333, 491, 519, 694, 897
Eco24I GRGCYC 1 cut(s) 1383
Eco32I GATATC 1 cut(s) 874
Eco47I GGWCC 2 cut(s) 734, 849
Eco53kI GAGCTC 1 cut(s) 1381
Eco57I CTGAAG 1 cut(s) 887
Eco72I CACGTG 1 cut(s) 56
Eco88I CYCGRG 4 cut(s) 730, 933, 1077, 1293
EcoICRI GAGCTC 1 cut(s) 1381
EcoRII CCWGG 2 cut(s) 912, 1317
EcoRV GATATC 1 cut(s) 874
EcoT14I CCWWGG 8 cut(s) 21, 133, 220, 333, 491, 519, 694, 897
EcoT38I GRGCYC 1 cut(s) 1383
ErhI CCWWGG 8 cut(s) 21, 133, 220, 333, 491, 519, 694, 897
FaeI CATG 8 cut(s) 337, 523, 608, 856, 968, 1193, 1426, 1477
FalI AAGNNNNNCTT 2 cut(s) 243, 275
FaqI GGGAC 4 cut(s) 64, 747, 1010, 1235
FatI CATG 8 cut(s) 333, 519, 604, 852, 964, 1189, 1422, 1473
FauI CCCGC 8 cut(s) 778, 942, 987, 1033, 1086, 1212, 1258, 1342
FblI GTMKAC 2 cut(s) 216, 487
FokI GGATG 5 cut(s) 188, 379, 459, 565, 701
FriOI GRGCYC 1 cut(s) 1383
FspBI CTAG 3 cut(s) 221, 458, 492
GlaI GCGC 2 cut(s) 306, 324
GsuI CTGGAG 4 cut(s) 284, 1004, 1229, 1508
HgaI GACGC 5 cut(s) 206, 311, 477, 1007, 1232
HhaI GCGC 2 cut(s) 307, 325
Hin1I GRCGYC 2 cut(s) 198, 469
Hin1II CATG 8 cut(s) 337, 523, 608, 856, 968, 1193, 1426, 1477
Hin6I GCGC 2 cut(s) 305, 323
HinP1I GCGC 2 cut(s) 305, 323
HincII GTYRAC 2 cut(s) 217, 488
HindII GTYRAC 2 cut(s) 217, 488
HinfI GANTC 6 cut(s) 238, 509, 740, 919, 938, 1082
Hpy166II GTNNAC 5 cut(s) 217, 290, 488, 678, 1111
Hpy188I TCNGA 5 cut(s) 94, 867, 1146, 1375, 1451
Hpy188III TCNNGA 6 cut(s) 30, 263, 1423, 1474, 1487, 1508
Hpy8I GTNNAC 5 cut(s) 217, 290, 488, 678, 1111
Hpy99I CGWCG 6 cut(s) 218, 278, 305, 323, 489, 836
HpyCH4III ACNGT 3 cut(s) 174, 926, 1070
HpyCH4IV ACGT 5 cut(s) 55, 213, 318, 484, 674
HpyCH4V TGCA 1 cut(s) 112
HpyF10VI GCNNNNNNNGC 6 cut(s) 802, 1007, 1016, 1121, 1232, 1241
HpyF3I CTNAG 8 cut(s) 74, 91, 812, 1026, 1062, 1251, 1287, 1456
HpySE526I ACGT 5 cut(s) 55, 213, 318, 484, 674
Hsp92I GRCGYC 2 cut(s) 198, 469
Hsp92II CATG 8 cut(s) 337, 523, 608, 856, 968, 1193, 1426, 1477
HspAI GCGC 2 cut(s) 305, 323
KspI CCGCGG 1 cut(s) 1338
LguI GCTCTTC 1 cut(s) 1371
LmnI GCTCC 6 cut(s) 413, 600, 991, 1012, 1216, 1237
Lsp1109I GCAGC 8 cut(s) 124, 337, 795, 817, 1042, 1267, 1384, 1387
LweI GCATC 5 cut(s) 626, 661, 936, 1080, 1111
MaeI CTAG 3 cut(s) 221, 458, 492
MaeII ACGT 5 cut(s) 55, 213, 318, 484, 674
MaeIII GTNAC 3 cut(s) 310, 670, 744
MbiI CCGCTC 2 cut(s) 994, 1219
MfeI CAATTG 1 cut(s) 246
MflI RGATCY 1 cut(s) 862
MhlI GDGCHC 3 cut(s) 1068, 1099, 1383
MluCI AATT 2 cut(s) 246, 1469
MlyI GAGTC 3 cut(s) 247, 518, 749
MmeI TCCRAC 1 cut(s) 1429
MroXI GAANNNNTTC 1 cut(s) 258
MslI CAYNNNNRTG 4 cut(s) 365, 551, 1146, 1388
MspA1I CMGCKG 4 cut(s) 808, 1033, 1258, 1337
MunI CAATTG 1 cut(s) 246
MvaI CCWGG 2 cut(s) 914, 1319
MvnI CGCG 5 cut(s) 305, 323, 1040, 1265, 1337
MwoI GCNNNNNNNGC 6 cut(s) 802, 1007, 1016, 1121, 1232, 1241
NcoI CCATGG 2 cut(s) 333, 519
NlaIII CATG 8 cut(s) 337, 523, 608, 856, 968, 1193, 1426, 1477
NlaIV GGNNCC 8 cut(s) 383, 389, 570, 576, 602, 647, 735, 1531
NmuCI GTSAC 3 cut(s) 310, 670, 744
NspV TTCGAA 1 cut(s) 85
PagI TCATGA 2 cut(s) 1422, 1473
PaqCI CACCTGC 1 cut(s) 1165
PciSI GCTCTTC 1 cut(s) 1371
PcsI WCGNNNNNNNCGW 4 cut(s) 233, 504, 828, 840
PdmI GAANNNNTTC 1 cut(s) 258
PfeI GAWTC 3 cut(s) 919, 938, 1082
PinAI ACCGGT 1 cut(s) 1550
PleI GAGTC 3 cut(s) 246, 517, 748
PmaCI CACGTG 1 cut(s) 56
PmlI CACGTG 1 cut(s) 56
PpsI GAGTC 3 cut(s) 246, 517, 748
Ppu21I YACGTR 1 cut(s) 56
PshAI GACNNNNGTC 2 cut(s) 317, 739
PsiI TTATAA 2 cut(s) 347, 533
Psp124BI GAGCTC 1 cut(s) 1383
Psp6I CCWGG 2 cut(s) 912, 1317
PspCI CACGTG 1 cut(s) 56
PspGI CCWGG 2 cut(s) 912, 1317
PspN4I GGNNCC 8 cut(s) 383, 389, 570, 576, 602, 647, 735, 1531
PspPI GGNCC 6 cut(s) 381, 568, 734, 849, 894, 1291
PstNI CAGNNNCTG 1 cut(s) 811
PsuI RGATCY 1 cut(s) 862
PvuII CAGCTG 1 cut(s) 808
RseI CAYNNNNRTG 4 cut(s) 365, 551, 1146, 1388
SacI GAGCTC 1 cut(s) 1383
SacII CCGCGG 1 cut(s) 1338
SalI GTCGAC 2 cut(s) 215, 486
SapI GCTCTTC 1 cut(s) 1371
Sau96I GGNCC 6 cut(s) 381, 568, 734, 849, 894, 1291
SchI GAGTC 3 cut(s) 247, 518, 749
SduI GDGCHC 3 cut(s) 1068, 1099, 1383
SfaNI GCATC 5 cut(s) 626, 661, 936, 1080, 1111
Sfr303I CCGCGG 1 cut(s) 1338
SfuI TTCGAA 1 cut(s) 85
SgrBI CCGCGG 1 cut(s) 1338
SinI GGWCC 2 cut(s) 734, 849
SmaI CCCGGG 4 cut(s) 732, 935, 1079, 1295
SmiMI CAYNNNNRTG 4 cut(s) 365, 551, 1146, 1388
SmlI CTYRAG 2 cut(s) 1046, 1271
SmoI CTYRAG 2 cut(s) 1046, 1271
Sse9I AATT 2 cut(s) 246, 1469
SspMI CTAG 3 cut(s) 221, 458, 492
SstI GAGCTC 1 cut(s) 1383
StyI CCWWGG 8 cut(s) 21, 133, 220, 333, 491, 519, 694, 897
TaaI ACNGT 3 cut(s) 174, 926, 1070
TaiI ACGT 5 cut(s) 58, 216, 321, 487, 677
TaqII GACCGA 1 cut(s) 231
TasI AATT 2 cut(s) 246, 1469
TatI WGTACW 1 cut(s) 1362
TauI GCSGC 4 cut(s) 1022, 1247, 1517, 1520
TfiI GAWTC 3 cut(s) 919, 938, 1082
TscAI CASTG 3 cut(s) 414, 601, 685
TseFI GTSAC 3 cut(s) 310, 670, 744
TseI GCWGC 8 cut(s) 112, 325, 805, 808, 1030, 1255, 1397, 1400
Tsp45I GTSAC 3 cut(s) 310, 670, 744
TspDTI ATGAA 5 cut(s) 953, 1178, 1439, 1462, 1476
TspMI CCCGGG 4 cut(s) 730, 933, 1077, 1293
TspRI CASTG 3 cut(s) 414, 601, 685
VpaK11BI GGWCC 2 cut(s) 734, 849
XapI RAATTY 1 cut(s) 1469
XmaI CCCGGG 4 cut(s) 730, 933, 1077, 1293
XmaJI CCTAGG 2 cut(s) 220, 491
XmiI GTMKAC 2 cut(s) 216, 487
XmnI GAANNNNTTC 1 cut(s) 258
XspI CTAG 3 cut(s) 221, 458, 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.