Rmu_sc0003033.1_g000059

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003033.1
OG0000087
Physical Location & Seq
Forward (+)
247685 .. 250685
3001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003033.1_g000059.1.cds

Sequence Viewer

Length: 2109 bp
atgtacagcttcgatacccgatggggtagaagatttgagcctctgtggtacccgatggggtcatcgttgcgtgtcggccacgtgggcagaccaagttgtgcaataaatgcccgtctcttcctctgccgaggcttcgagaaatgggaggacgcatgggacacgtgtagcgatcctacggcagaggtcgcttcggttccgacggtcctgatgcatatagcaagatttgaggtccccggtaccatagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcctctgccaggcgagctgaaatggacatcgaccggtacctaggccgggtagaacaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccatccccgagggcattccgaagccgaggtacacacttgaggacgggaccgtatgcgatgaacctgggagaagcatgacgatgaaggagatggtagacatgcggctgaagtggggaataccggacgcagtagagcttaggcctcttagggatggggaactggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaaggcatgatggccatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcggtccaccgggtactgtattctaggaagcggtcttgtgcgggtacgtcctatacgctatccgaagtagaaaagaagaggatagcctgggtatatgccgtgtggtcagagaaagagaggagctcttataggttcatccggcactcaatactttttaggctagggttagggtggctccccgtgaaagccccgaagaggaaaccccggaaaggcaaggaggaagacaggatggatgatgctcagttaatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagcgtcgaaaggcacgagtcggtccattgaggagaccttgttggagattaccgatgagggatacggtgaacctgatcccgacgcccctgttacccgcgccgcgcagccctccatggccgatgtccttacgatagctgacaccggggtgggtaaagtaccggcctcagtgcccctttcctctcgttccactgggagcgacgaggtattgctcgagggtgagaagaagagatcccacaagcaccggcatcgaaccaataaggaggtgacgtacactggccgggatgtccagggtaccggtgtaaagaggcagaagaaagatcacccgggaccagggccgtcgccctctcttggcttgttatctcccgccgttccggtaatccccaagaagcccatcaagcagctgctgaatgaatacggggttgccgatgaaaaattcgtgcgggccatgcttggggatctgaaggacattgacctcgaccgggttcgagccaaagataatactcccccggagaaccgccgtctcgcccgggagtcaatgatgcgggcactcttcaatgtttacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaacctctccgagcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactctttgagggctgagatggccacctctaagcagcggattgcggagcttgagggtgaggttgccgaggcgcgggaggaggtcaagaacgcccgggactccgaaacaaaggctgcagagtcttccgtctcatggaaggagaaggctgactctctggaggatcaccttcccacggagaggcacgaggccttggaggagtacaagtcctcggatgagcttatcgctatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggaggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaaaaaagagcgggaggcggcgggcaagtctggtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

702

Amino Acids

78.34

Weight (kDa)

5.63

Isoelectric Point (pI)

45.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1648
AatII GACGTC 1 cut(s) 1029
Acc36I ACCTGC 1 cut(s) 1648
Acc65I GGTACC 4 cut(s) 48, 236, 330, 1325
AccB1I GGYRCC 5 cut(s) 48, 236, 330, 1325, 2069
AccBSI CCGCTC 2 cut(s) 1702, 2047
AccI GTMKAC 2 cut(s) 555, 1029
AccII CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
AclWI GGATC 7 cut(s) 164, 289, 439, 1103, 1257, 1497, 1872
AcoI YGGCCR 7 cut(s) 76, 459, 621, 684, 1149, 1309, 1725
AcsI RAATTY 2 cut(s) 1466, 2009
AcuI CTGAAG 3 cut(s) 587, 1514, 1649
AcvI CACGTG 2 cut(s) 82, 162
AcyI GRCGYC 3 cut(s) 1026, 1116, 1605
AflIII ACRYGT 2 cut(s) 159, 161
AgeI ACCGGT 2 cut(s) 327, 1328
AgsI TTSAA 1 cut(s) 1588
AhdI GACNNNNNGTC 1 cut(s) 1036
AjnI CCWGG 8 cut(s) 263, 302, 523, 821, 999, 1320, 1363, 2025
AleI CACNNNNGTG 1 cut(s) 1178
AloI GAACNNNNNNTCC 2 cut(s) 353, 385
Alw21I GWGCWC 1 cut(s) 860
Alw26I GTCTC 6 cut(s) 119, 1061, 1559, 1837, 2027, 2085
AlwI GGATC 7 cut(s) 164, 289, 439, 1103, 1257, 1497, 1872
AlwNI CAGNNNCTG 1 cut(s) 1438
Ama87I CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
ApeKI GCWGC 8 cut(s) 652, 1138, 1432, 1435, 1738, 1817, 1937, 1940
ApoI RAATTY 2 cut(s) 1466, 2009
AsiGI ACCGGT 2 cut(s) 327, 1328
Asp718I GGTACC 4 cut(s) 48, 236, 330, 1325
AspA2I CCTAGG 1 cut(s) 334
AspLEI GCGC 5 cut(s) 652, 737, 1133, 1138, 1777
AsuHPI GGTGA 8 cut(s) 428, 1112, 1262, 1309, 1346, 1672, 1772, 1859
AvaI CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
AvaII GGWCC 8 cut(s) 202, 229, 369, 507, 694, 739, 1056, 1361
AvrII CCTAGG 1 cut(s) 334
BaeGI GKGCMC 2 cut(s) 1206, 1582
BaeI ACNNNNGTAYC 4 cut(s) 228, 261, 1317, 1350
BalI TGGCCA 3 cut(s) 461, 686, 1727
BanI GGYRCC 5 cut(s) 48, 236, 330, 1325, 2069
BanII GRGCYC 1 cut(s) 860
BarI GAAGNNNNNNTAC 2 cut(s) 473, 505
BauI CACGAG 3 cut(s) 656, 1048, 1886
BbrPI CACGTG 2 cut(s) 82, 162
BbsI GAAGAC 2 cut(s) 963, 1818
Bbv12I GWGCWC 1 cut(s) 860
BbvI GCAGC 8 cut(s) 639, 1150, 1422, 1444, 1750, 1804, 1924, 1927
BceAI ACGGC 5 cut(s) 192, 818, 1354, 1385, 1536
BcgI CGANNNNNNTGC 2 cut(s) 1262, 1296
BciT130I CCWGG 8 cut(s) 265, 304, 525, 823, 1001, 1322, 1365, 2027
BciVI GTATCC 2 cut(s) 268, 1088
BcoDI GTCTC 6 cut(s) 119, 1061, 1559, 1837, 2027, 2085
BfaI CTAG 4 cut(s) 335, 759, 896, 1034
BfmI CTRYAG 1 cut(s) 1818
BfoI RGCGCY 1 cut(s) 653
BfuAI ACCTGC 1 cut(s) 1648
BfuI GTATCC 2 cut(s) 268, 1088
BglI GCCNNNNNGGC 1 cut(s) 84
BlnI CCTAGG 1 cut(s) 334
Bme18I GGWCC 8 cut(s) 202, 229, 369, 507, 694, 739, 1056, 1361
BmeRI GACNNNNNGTC 1 cut(s) 1036
BmeT110I CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
BmrI ACTGGG 2 cut(s) 387, 1233
BmsI GCATC 5 cut(s) 198, 961, 1000, 1288, 1563
BmuI ACTGGG 2 cut(s) 387, 1233
BpiI GAAGAC 2 cut(s) 963, 1818
BplI GAGNNNNNCTC 4 cut(s) 842, 874, 1691, 1723
BpmI CTGGAG 3 cut(s) 1712, 1880, 2048
Bpu10I CCTNAGC 1 cut(s) 596
BpuEI CTTGAG 2 cut(s) 518, 1775
BsaAI YACGTR 2 cut(s) 82, 162
BsaBI GATNNNNATC 2 cut(s) 1623, 2097
BsaHI GRCGYC 3 cut(s) 1026, 1116, 1605
BsaI GGTCTC 3 cut(s) 1061, 2027, 2085
BsaWI WCCGGW 4 cut(s) 327, 580, 1328, 1405
BsaXI ACNNNNNCTCC 8 cut(s) 1058, 1088, 1286, 1316, 1892, 1922, 1976, 2006
Bse118I RCCGGY 5 cut(s) 327, 1192, 1275, 1328, 2072
Bse1I ACTGG 5 cut(s) 292, 382, 624, 1228, 1312
Bse8I GATNNNNATC 2 cut(s) 1623, 2097
BseBI CCWGG 8 cut(s) 265, 304, 525, 823, 1001, 1322, 1365, 2027
BseGI GGATG 8 cut(s) 255, 462, 616, 870, 969, 973, 1321, 1921
BseJI GATNNNNATC 2 cut(s) 1623, 2097
BseMII CTCAG 4 cut(s) 989, 1212, 1710, 2096
BseNI ACTGG 5 cut(s) 292, 382, 624, 1228, 1312
BseRI GAGGAG 5 cut(s) 868, 1079, 1649, 1796, 1913
BseSI GKGCMC 2 cut(s) 1206, 1582
BseXI GCAGC 8 cut(s) 639, 1150, 1422, 1444, 1750, 1804, 1924, 1927
BsgI GTGCAG 2 cut(s) 638, 1001
Bsh1236I CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
Bsh1285I CGRYCG 2 cut(s) 328, 1513
BshNI GGYRCC 5 cut(s) 48, 236, 330, 1325, 2069
BshTI ACCGGT 2 cut(s) 327, 1328
BsiEI CGRYCG 2 cut(s) 328, 1513
BsiHKAI GWGCWC 1 cut(s) 860
BsiHKCI CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
BslFI GGGAC 7 cut(s) 170, 215, 520, 707, 1374, 1718, 1814
BsmAI GTCTC 6 cut(s) 119, 1061, 1559, 1837, 2027, 2085
BsmBI CGTCTC 3 cut(s) 119, 1559, 1837
BsmFI GGGAC 7 cut(s) 170, 215, 520, 707, 1374, 1718, 1814
BsmI GAATGC 1 cut(s) 474
Bso31I GGTCTC 3 cut(s) 1061, 2027, 2085
BsoBI CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
Bsp1286I GDGCHC 3 cut(s) 860, 1206, 1582
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
Bsp19I CCATGG 1 cut(s) 1146
BspCNI CTCAG 4 cut(s) 988, 1211, 1711, 2095
BspFNI CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
BspHI TCATGA 1 cut(s) 1962
BspMAI CTGCAG 1 cut(s) 1822
BspMI ACCTGC 1 cut(s) 1648
BspPI GGATC 7 cut(s) 164, 289, 439, 1103, 1257, 1497, 1872
BspT107I GGYRCC 5 cut(s) 48, 236, 330, 1325, 2069
BspTNI GGTCTC 3 cut(s) 1061, 2027, 2085
BsrBI CCGCTC 2 cut(s) 1702, 2047
BsrFI RCCGGY 5 cut(s) 327, 1192, 1275, 1328, 2072
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 5 cut(s) 292, 382, 624, 1228, 1312
BssAI RCCGGY 5 cut(s) 327, 1192, 1275, 1328, 2072
BssMI GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
BssNI GRCGYC 3 cut(s) 1026, 1116, 1605
BssSI CACGAG 3 cut(s) 656, 1048, 1886
BssT1I CCWWGG 4 cut(s) 334, 673, 1146, 1893
Bst2BI CACGAG 3 cut(s) 656, 1048, 1886
Bst2UI CCWGG 8 cut(s) 265, 304, 525, 823, 1001, 1322, 1365, 2027
Bst4CI ACNGT 5 cut(s) 202, 457, 511, 753, 1100
Bst6I CTCTTC 5 cut(s) 122, 806, 923, 1253, 1589
BstACI GRCGYC 3 cut(s) 1026, 1116, 1605
BstAPI GCANNNNNTGC 2 cut(s) 107, 632
BstAUI TGTACA 1 cut(s) 3
BstBAI YACGTR 2 cut(s) 82, 162
BstC8I GCNNGC 7 cut(s) 309, 704, 1476, 1578, 1609, 1935, 2059
BstDEI CTNAG 8 cut(s) 596, 605, 975, 1198, 1719, 1734, 1996, 2082
BstDSI CCRYGG 2 cut(s) 1146, 1875
BstENI CCTNNNNNAGG 1 cut(s) 301
BstF5I GGATG 8 cut(s) 255, 462, 616, 870, 969, 973, 1321, 1921
BstFNI CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
BstH2I RGCGCY 1 cut(s) 653
BstHHI GCGC 5 cut(s) 652, 737, 1133, 1138, 1777
BstKTI GATC 9 cut(s) 172, 284, 434, 1111, 1265, 1354, 1492, 1867, 2101
BstMAI GTCTC 6 cut(s) 119, 1061, 1559, 1837, 2027, 2085
BstMBI GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
BstMCI CGRYCG 2 cut(s) 328, 1513
BstNI CCWGG 8 cut(s) 265, 304, 525, 823, 1001, 1322, 1365, 2027
BstNSI RCATGY 2 cut(s) 562, 991
BstSFI CTRYAG 1 cut(s) 1818
BstSLI GKGCMC 2 cut(s) 1206, 1582
BstUI CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
BstV1I GCAGC 8 cut(s) 639, 1150, 1422, 1444, 1750, 1804, 1924, 1927
BstV2I GAAGAC 2 cut(s) 963, 1818
BstX2I RGATCY 3 cut(s) 431, 1262, 1489
BstYI RGATCY 3 cut(s) 431, 1262, 1489
BsuI GTATCC 2 cut(s) 268, 1088
BtgI CCRYGG 2 cut(s) 1146, 1875
BtgZI GCGATG 1 cut(s) 531
BtsCI GGATG 8 cut(s) 255, 462, 616, 870, 969, 973, 1321, 1921
BtsIMutI CAGTG 4 cut(s) 462, 1206, 1221, 1305
BveI ACCTGC 1 cut(s) 1648
Cac8I GCNNGC 7 cut(s) 309, 704, 1476, 1578, 1609, 1935, 2059
CaiI CAGNNNCTG 1 cut(s) 1438
CciI TCATGA 1 cut(s) 1962
CfoI GCGC 5 cut(s) 652, 737, 1133, 1138, 1777
Cfr10I RCCGGY 5 cut(s) 327, 1192, 1275, 1328, 2072
Cfr9I CCCGGG 4 cut(s) 637, 1357, 1560, 1797
CseI GACGC 5 cut(s) 158, 593, 1026, 1124, 1613
CspAI ACCGGT 2 cut(s) 327, 1328
DdeI CTNAG 8 cut(s) 596, 605, 975, 1198, 1719, 1734, 1996, 2082
DpnI GATC 9 cut(s) 171, 283, 433, 1110, 1264, 1353, 1491, 1866, 2100
DpnII GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
DriI GACNNNNNGTC 1 cut(s) 1036
EaeI YGGCCR 7 cut(s) 76, 459, 621, 684, 1149, 1309, 1725
Eam1104I CTCTTC 5 cut(s) 122, 806, 923, 1253, 1589
Eam1105I GACNNNNNGTC 1 cut(s) 1036
EarI CTCTTC 5 cut(s) 122, 806, 923, 1253, 1589
Ecl136II GAGCTC 1 cut(s) 858
Eco130I CCWWGG 4 cut(s) 334, 673, 1146, 1893
Eco147I AGGCCT 2 cut(s) 601, 1892
Eco24I GRGCYC 1 cut(s) 860
Eco31I GGTCTC 3 cut(s) 1061, 2027, 2085
Eco47I GGWCC 8 cut(s) 202, 229, 369, 507, 694, 739, 1056, 1361
Eco53kI GAGCTC 1 cut(s) 858
Eco57I CTGAAG 3 cut(s) 587, 1514, 1649
Eco72I CACGTG 2 cut(s) 82, 162
Eco88I CYCGRG 6 cut(s) 467, 637, 1244, 1357, 1560, 1797
EcoICRI GAGCTC 1 cut(s) 858
EcoNI CCTNNNNNAGG 1 cut(s) 301
EcoO109I RGGNCCY 4 cut(s) 229, 369, 442, 694
EcoRII CCWGG 8 cut(s) 263, 302, 523, 821, 999, 1320, 1363, 2025
EcoT14I CCWWGG 4 cut(s) 334, 673, 1146, 1893
EcoT22I ATGCAT 1 cut(s) 213
EcoT38I GRGCYC 1 cut(s) 860
ErhI CCWWGG 4 cut(s) 334, 673, 1146, 1893
Esp3I CGTCTC 3 cut(s) 119, 1559, 1837
FaqI GGGAC 7 cut(s) 170, 215, 520, 707, 1374, 1718, 1814
FblI GTMKAC 2 cut(s) 555, 1029
FokI GGATG 8 cut(s) 262, 449, 623, 857, 976, 980, 1328, 1928
FriOI GRGCYC 1 cut(s) 860
FspBI CTAG 4 cut(s) 335, 759, 896, 1034
GlaI GCGC 5 cut(s) 651, 736, 1132, 1137, 1776
GsuI CTGGAG 3 cut(s) 1712, 1880, 2048
HaeII RGCGCY 1 cut(s) 653
HgaI GACGC 5 cut(s) 158, 593, 1026, 1124, 1613
HhaI GCGC 5 cut(s) 652, 737, 1133, 1138, 1777
Hin1I GRCGYC 3 cut(s) 1026, 1116, 1605
Hin6I GCGC 5 cut(s) 650, 735, 1131, 1136, 1775
HinP1I GCGC 5 cut(s) 650, 735, 1131, 1136, 1775
HincII GTYRAC 1 cut(s) 1030
HindII GTYRAC 1 cut(s) 1030
HinfI GANTC 9 cut(s) 254, 404, 661, 1051, 1565, 1706, 1802, 1823, 1853
HphI GGTGA 8 cut(s) 428, 1112, 1262, 1309, 1346, 1672, 1772, 1859
Hpy166II GTNNAC 7 cut(s) 492, 556, 742, 1030, 1103, 1305, 1594
Hpy188III TCNNGA 6 cut(s) 136, 205, 1112, 1789, 1859, 1963
Hpy8I GTNNAC 7 cut(s) 492, 556, 742, 1030, 1103, 1305, 1594
Hpy99I CGWCG 9 cut(s) 202, 289, 413, 1028, 1031, 1042, 1118, 1235, 1375
HpyAV CCTTC 9 cut(s) 538, 726, 1489, 1624, 1675, 1690, 1834, 1840, 1880
HpyCH4III ACNGT 5 cut(s) 202, 457, 511, 753, 1100
HpyCH4IV ACGT 5 cut(s) 81, 161, 782, 1026, 1301
HpyCH4V TGCA 5 cut(s) 101, 211, 655, 1018, 1820
HpyF3I CTNAG 8 cut(s) 596, 605, 975, 1198, 1719, 1734, 1996, 2082
HpySE526I ACGT 5 cut(s) 81, 161, 782, 1026, 1301
Hsp92I GRCGYC 3 cut(s) 1026, 1116, 1605
HspAI GCGC 5 cut(s) 650, 735, 1131, 1136, 1775
KpnI GGTACC 4 cut(s) 52, 240, 334, 1329
Kzo9I GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
LmnI GCTCC 6 cut(s) 672, 855, 915, 1227, 1699, 1750
Lsp1109I GCAGC 8 cut(s) 639, 1150, 1422, 1444, 1750, 1804, 1924, 1927
LweI GCATC 5 cut(s) 198, 961, 1000, 1288, 1563
MaeI CTAG 4 cut(s) 335, 759, 896, 1034
MaeII ACGT 5 cut(s) 81, 161, 782, 1026, 1301
MaeIII GTNAC 3 cut(s) 451, 1123, 1297
MalI GATC 9 cut(s) 171, 283, 433, 1110, 1264, 1353, 1491, 1866, 2100
MbiI CCGCTC 2 cut(s) 1702, 2047
MboI GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
MflI RGATCY 3 cut(s) 431, 1262, 1489
MhlI GDGCHC 3 cut(s) 860, 1206, 1582
MlsI TGGCCA 3 cut(s) 461, 686, 1727
MluCI AATT 3 cut(s) 350, 1466, 2009
MluNI TGGCCA 3 cut(s) 461, 686, 1727
MlyI GAGTC 7 cut(s) 413, 1060, 1574, 1700, 1796, 1832, 1847
MmeI TCCRAC 3 cut(s) 221, 432, 1056
Mox20I TGGCCA 3 cut(s) 461, 686, 1727
Mph1103I ATGCAT 1 cut(s) 213
MscI TGGCCA 3 cut(s) 461, 686, 1727
MseI TTAA 2 cut(s) 980, 1971
MslI CAYNNNNRTG 3 cut(s) 539, 992, 1178
Msp20I TGGCCA 3 cut(s) 461, 686, 1727
MspA1I CMGCKG 2 cut(s) 1435, 1741
MteI GCGCNGCGC 1 cut(s) 1134
Mva1269I GAATGC 1 cut(s) 474
MvaI CCWGG 8 cut(s) 265, 304, 525, 823, 1001, 1322, 1365, 2027
MvnI CGCG 5 cut(s) 735, 737, 1131, 1136, 1777
NcoI CCATGG 1 cut(s) 1146
NdeII GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
NmeAIII GCCGAG 3 cut(s) 152, 510, 1795
NmuCI GTSAC 1 cut(s) 1297
NsiI ATGCAT 1 cut(s) 213
NspI RCATGY 2 cut(s) 562, 991
OliI CACNNNNGTG 1 cut(s) 1178
PaeR7I CTCGAG 1 cut(s) 1244
PagI TCATGA 1 cut(s) 1962
PaqCI CACCTGC 1 cut(s) 1648
PceI AGGCCT 2 cut(s) 601, 1892
PcsI WCGNNNNNNNCGW 4 cut(s) 284, 371, 1046, 1455
PctI GAATGC 1 cut(s) 474
PfeI GAWTC 2 cut(s) 254, 661
PfoI TCCNGGA 1 cut(s) 2025
PinAI ACCGGT 2 cut(s) 327, 1328
PleI GAGTC 7 cut(s) 412, 1059, 1573, 1700, 1796, 1831, 1847
PmaCI CACGTG 2 cut(s) 82, 162
PmlI CACGTG 2 cut(s) 82, 162
PpsI GAGTC 7 cut(s) 412, 1059, 1573, 1700, 1796, 1831, 1847
Ppu21I YACGTR 2 cut(s) 82, 162
PpuMI RGGWCCY 3 cut(s) 229, 369, 694
Psp124BI GAGCTC 1 cut(s) 860
Psp5II RGGWCCY 3 cut(s) 229, 369, 694
Psp6I CCWGG 8 cut(s) 263, 302, 523, 821, 999, 1320, 1363, 2025
PspCI CACGTG 2 cut(s) 82, 162
PspGI CCWGG 8 cut(s) 263, 302, 523, 821, 999, 1320, 1363, 2025
PspPPI RGGWCCY 3 cut(s) 229, 369, 694
PspXI VCTCGAGB 1 cut(s) 1244
PstI CTGCAG 1 cut(s) 1822
PstNI CAGNNNCTG 1 cut(s) 1438
PsuI RGATCY 3 cut(s) 431, 1262, 1489
PvuII CAGCTG 1 cut(s) 1435
RseI CAYNNNNRTG 3 cut(s) 539, 992, 1178
SacI GAGCTC 1 cut(s) 860
SalI GTCGAC 1 cut(s) 1028
SaqAI TTAA 2 cut(s) 980, 1971
Sau3AI GATC 9 cut(s) 169, 281, 431, 1108, 1262, 1351, 1489, 1864, 2098
SchI GAGTC 7 cut(s) 413, 1060, 1574, 1700, 1796, 1832, 1847
SduI GDGCHC 3 cut(s) 860, 1206, 1582
SfaNI GCATC 5 cut(s) 198, 961, 1000, 1288, 1563
SfcI CTRYAG 1 cut(s) 1818
Sfr274I CTCGAG 1 cut(s) 1244
SinI GGWCC 8 cut(s) 202, 229, 369, 507, 694, 739, 1056, 1361
SlaI CTCGAG 1 cut(s) 1244
SmaI CCCGGG 4 cut(s) 639, 1359, 1562, 1799
SmiMI CAYNNNNRTG 3 cut(s) 539, 992, 1178
SmlI CTYRAG 3 cut(s) 497, 1244, 1754
SmoI CTYRAG 3 cut(s) 497, 1244, 1754
Sse9I AATT 3 cut(s) 350, 1466, 2009
SseBI AGGCCT 2 cut(s) 601, 1892
SspMI CTAG 4 cut(s) 335, 759, 896, 1034
SstI GAGCTC 1 cut(s) 860
StuI AGGCCT 2 cut(s) 601, 1892
StyI CCWWGG 4 cut(s) 334, 673, 1146, 1893
TaaI ACNGT 5 cut(s) 202, 457, 511, 753, 1100
TaiI ACGT 5 cut(s) 84, 164, 785, 1029, 1304
TaqII GACCGA 1 cut(s) 1044
TasI AATT 3 cut(s) 350, 1466, 2009
TatI WGTACW 2 cut(s) 3, 1902
TauI GCSGC 4 cut(s) 565, 626, 1136, 2057
TfiI GAWTC 2 cut(s) 254, 661
Tru1I TTAA 2 cut(s) 980, 1971
Tru9I TTAA 2 cut(s) 980, 1971
TscAI CASTG 4 cut(s) 462, 1206, 1228, 1312
TseFI GTSAC 1 cut(s) 1297
TseI GCWGC 8 cut(s) 652, 1138, 1432, 1435, 1738, 1817, 1937, 1940
Tsp45I GTSAC 1 cut(s) 1297
TspDTI ATGAA 8 cut(s) 534, 557, 859, 1458, 1476, 1661, 1979, 2016
TspGWI ACGGA 2 cut(s) 1819, 1892
TspMI CCCGGG 4 cut(s) 637, 1357, 1560, 1797
TspRI CASTG 4 cut(s) 462, 1206, 1228, 1312
VpaK11BI GGWCC 8 cut(s) 202, 229, 369, 507, 694, 739, 1056, 1361
XagI CCTNNNNNAGG 1 cut(s) 301
XapI RAATTY 2 cut(s) 1466, 2009
XceI RCATGY 2 cut(s) 562, 991
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XhoI CTCGAG 1 cut(s) 1244
XmaI CCCGGG 4 cut(s) 637, 1357, 1560, 1797
XmaJI CCTAGG 1 cut(s) 334
XmiI GTMKAC 2 cut(s) 555, 1029
XspI CTAG 4 cut(s) 335, 759, 896, 1034
ZraI GACGTC 1 cut(s) 1027
Zsp2I ATGCAT 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.