FvH4_6g16061

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000087
Physical Location & Seq
Reverse (-)
10102224 .. 10104398
2175 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g16061.t1

Sequence Viewer

Length: 1230 bp
ATGGCCTCTCGGGCTTCTTCTCCCTTTGAGTCTTCTTGCTCGAGTCCTGACCACACAGATGTTCCCACTCAAGACAATGGCGCGGGGGTAGTTTTTGAGGCTATACCCATCACCCGGGCCCTACACCGATTGGAGGATGGTAGGGTCTGTGACGAACCGGCGTGTAGCTTCACGCCTAAGGATATTAGACGTTTTAGAGAGGAGTGGGACATTCCCTCAGACCTACCACTGCGCGGATTACGTCCCGGAGAATTAGCCTGCGCTCCTCGAGATAATTTCATCGCAGTGCATGACAATATGTTTAGGAACGGAGGTGGACCTGGACACGCACTGGAAGTCCCGGATTCTGCCTACGGGACAACGGCTCCTCCGCCGCCGCCGCCTCCTCTAGGAAGCTCCAATGTGGTTGTGAATCTGGGCGAGAAGAAGAAGCGCCACCACAACCACTCGAAGAAGAAAGACCAGGCTGTTCTGGATTCCCAGGTGACCTTCACCGGGAAGGATGTCTCCAGGGACCTTGCCCCAAACCCGAAGAGACATAAGTTGGCATCCAGAGGTTCTACTCCCTCACTGTCCCTGCTGGCCCCTCCCCTTCCTACCATCACGAAGACCCCAATCAGGCAAGTCCTTGATGAATACGGGTGCGCGAACGAGAAGTTCATGCGCGCCATGATCCGGGACCTTAAGGGTATTGACCTCGACCGAGTGAGGTTTAAGGAAGGGTCTCCCTCCGAGTCTCGACAGATTGCTCGAGAGCATCTGATGAAGACTCTCTACACGGTGTACTCTATCGAGGCCAGCGAGGATATCCTTGAACTCAAGGAGCAAGTGGCCAAGCTGAACGGTCACGAAGTGAAACACAAGGCTAACCGAGTCCCAGAGCTTGAAGCCGAGGTTGAGTCTCTGCACTTGGCGGTCGAGAAGCTTCGAGTAGGAGCCGCTGCCGGATTACAAGAATCTCAAAAGCTGAAAGATCTTCTGAAAGCTGCCTGGGATAGTGTCATCACACAGAAGTTCACGGAGTGGAGTGAGTATGGATACCTGGACAAGCCCCGGATGATGGCTGATCTGCTCGCCTCAAAGGCAAAGGCTAAGGCTCAGGACTCCCAGCCCGTCCCCACGGAGGGTCCTCCCGAGACTAATCTTGAGACTATTGGAGATGAGGAGATTGTGTCCGAGAGCGAGGATGAAGAAGAGCTTGGTGACCCAGCCGAGAAGGACCAGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

410

Amino Acids

45.08

Weight (kDa)

5.51

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 4 cut(s) 83, 234, 647, 666
AciI CCGC 8 cut(s) 83, 234, 371, 374, 377, 380, 914, 939
AclWI GGATC 1 cut(s) 667
AcoI YGGCCR 1 cut(s) 831
AdeI CACNNNGTG 2 cut(s) 853, 1023
AfaI GTAC 1 cut(s) 785
AflII CTTAAG 1 cut(s) 683
AgsI TTSAA 2 cut(s) 815, 887
AjnI CCWGG 7 cut(s) 319, 462, 480, 509, 989, 1041, 1221
AjuI GAANNNNNNNTTGG 2 cut(s) 1182, 1214
AluBI AGCT 8 cut(s) 168, 396, 838, 883, 925, 967, 986, 1198
AluI AGCT 8 cut(s) 168, 396, 838, 883, 925, 967, 986, 1198
Alw26I GTCTC 7 cut(s) 511, 529, 729, 741, 906, 1130, 1142
AlwI GGATC 1 cut(s) 667
Ama87I CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
AoxI GGCC 5 cut(s) 3, 117, 582, 795, 831
ApaI GGGCCC 1 cut(s) 121
ApeKI GCWGC 2 cut(s) 941, 986
AspLEI GCGC 7 cut(s) 83, 234, 263, 435, 647, 666, 668
AspS9I GGNCC 8 cut(s) 117, 118, 317, 514, 583, 679, 1127, 1219
AsuC2I CCSGG 7 cut(s) 115, 116, 246, 341, 496, 677, 1054
AsuHPI GGTGA 4 cut(s) 103, 484, 496, 1214
AvaI CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
AvaII GGWCC 5 cut(s) 317, 514, 679, 1127, 1219
AxyI CCTNAGG 1 cut(s) 177
BaeGI GKGCMC 1 cut(s) 121
BalI TGGCCA 1 cut(s) 833
BanII GRGCYC 1 cut(s) 121
BarI GAAGNNNNNNTAC 2 cut(s) 758, 790
BbsI GAAGAC 3 cut(s) 24, 614, 773
BbvI GCAGC 2 cut(s) 928, 973
BccI CCATC 4 cut(s) 116, 131, 608, 1054
BceAI ACGGC 1 cut(s) 378
BciT130I CCWGG 7 cut(s) 321, 464, 482, 511, 991, 1043, 1223
BciVI GTATCC 1 cut(s) 1031
BcnI CCSGG 7 cut(s) 115, 116, 246, 341, 496, 677, 1054
BcoDI GTCTC 7 cut(s) 511, 529, 729, 741, 906, 1130, 1142
BfaI CTAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 436
BfrI CTTAAG 1 cut(s) 683
BfuI GTATCC 1 cut(s) 1031
BglI GCCNNNNNGGC 2 cut(s) 11, 1082
BglII AGATCT 1 cut(s) 973
BisI GCNGC 6 cut(s) 374, 377, 380, 939, 942, 987
BlsI GCNGC 6 cut(s) 375, 378, 381, 940, 943, 988
Bme18I GGWCC 5 cut(s) 317, 514, 679, 1127, 1219
BmeT110I CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
BmgT120I GGNCC 8 cut(s) 117, 118, 317, 514, 583, 679, 1127, 1219
BmiI GGNNCC 7 cut(s) 119, 366, 515, 585, 680, 937, 1128
BmsI GCATC 2 cut(s) 557, 766
BpiI GAAGAC 3 cut(s) 24, 614, 773
BpmI CTGGAG 1 cut(s) 493
Bpu10I CCTNAGC 2 cut(s) 1092, 1098
BpuEI CTTGAG 3 cut(s) 54, 803, 1166
BpuMI CCSGG 7 cut(s) 115, 116, 246, 341, 496, 677, 1054
BsaI GGTCTC 1 cut(s) 729
BsaJI CCNNGG 7 cut(s) 114, 480, 510, 891, 990, 1052, 1119
BsaXI ACNNNNNCTCC 6 cut(s) 349, 352, 379, 382, 1157, 1187
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 336
Bse21I CCTNAGG 1 cut(s) 177
BseBI CCWGG 7 cut(s) 321, 464, 482, 511, 991, 1043, 1223
BseDI CCNNGG 7 cut(s) 114, 480, 510, 891, 990, 1052, 1119
BseGI GGATG 5 cut(s) 142, 508, 548, 1062, 1192
BseMII CTCAG 2 cut(s) 231, 1112
BseNI ACTGG 1 cut(s) 336
BsePI GCGCGC 1 cut(s) 664
BseRI GAGGAG 5 cut(s) 215, 255, 357, 375, 1178
BseSI GKGCMC 1 cut(s) 121
BseXI GCAGC 2 cut(s) 928, 973
BseYI CCCAGC 2 cut(s) 1107, 1207
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 4 cut(s) 83, 234, 647, 666
Bsh1285I CGRYCG 2 cut(s) 703, 918
BshFI GGCC 5 cut(s) 5, 119, 584, 797, 833
BsiEI CGRYCG 2 cut(s) 703, 918
BsiHKCI CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
BsiSI CCGG 8 cut(s) 115, 158, 246, 341, 495, 676, 945, 1054
BslFI GGGAC 9 cut(s) 221, 228, 323, 370, 527, 559, 692, 860, 1100
BsmAI GTCTC 7 cut(s) 511, 529, 729, 741, 906, 1130, 1142
BsmFI GGGAC 9 cut(s) 221, 228, 323, 370, 527, 559, 692, 860, 1100
BsnI GGCC 5 cut(s) 5, 119, 584, 797, 833
Bso31I GGTCTC 1 cut(s) 729
BsoBI CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
Bsp120I GGGCCC 1 cut(s) 117
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 3 cut(s) 672, 973, 1066
BspACI CCGC 8 cut(s) 83, 234, 371, 374, 377, 380, 914, 939
BspANI GGCC 5 cut(s) 5, 119, 584, 797, 833
BspCNI CTCAG 2 cut(s) 230, 1111
BspFNI CGCG 4 cut(s) 83, 234, 647, 666
BspLI GGNNCC 7 cut(s) 119, 366, 515, 585, 680, 937, 1128
BspPI GGATC 1 cut(s) 667
BspQI GCTCTTC 1 cut(s) 1188
BspTI CTTAAG 1 cut(s) 683
BspTNI GGTCTC 1 cut(s) 729
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 1 cut(s) 336
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 7 cut(s) 114, 480, 510, 891, 990, 1052, 1119
BssHII GCGCGC 1 cut(s) 664
BssMI GATC 3 cut(s) 672, 973, 1066
Bst2UI CCWGG 7 cut(s) 321, 464, 482, 511, 991, 1043, 1223
Bst4CI ACNGT 3 cut(s) 573, 781, 845
Bst6I CTCTTC 2 cut(s) 527, 1188
BstAFI CTTAAG 1 cut(s) 683
BstC8I GCNNGC 5 cut(s) 259, 582, 666, 799, 1074
BstDEI CTNAG 5 cut(s) 177, 217, 1092, 1098, 1227
BstDSI CCRYGG 1 cut(s) 1119
BstEII GGTNACC 2 cut(s) 484, 1202
BstENI CCTNNNNNAGG 1 cut(s) 387
BstF5I GGATG 5 cut(s) 142, 508, 548, 1062, 1192
BstFNI CGCG 4 cut(s) 83, 234, 647, 666
BstH2I RGCGCY 1 cut(s) 436
BstHHI GCGC 7 cut(s) 83, 234, 263, 435, 647, 666, 668
BstKTI GATC 3 cut(s) 675, 976, 1069
BstMAI GTCTC 7 cut(s) 511, 529, 729, 741, 906, 1130, 1142
BstMBI GATC 3 cut(s) 672, 973, 1066
BstMCI CGRYCG 2 cut(s) 703, 918
BstMWI GCNNNNNNNGC 3 cut(s) 11, 379, 1082
BstNI CCWGG 7 cut(s) 321, 464, 482, 511, 991, 1043, 1223
BstPI GGTNACC 2 cut(s) 484, 1202
BstSLI GKGCMC 1 cut(s) 121
BstUI CGCG 4 cut(s) 83, 234, 647, 666
BstV1I GCAGC 2 cut(s) 928, 973
BstV2I GAAGAC 3 cut(s) 24, 614, 773
BstX2I RGATCY 1 cut(s) 973
BstYI RGATCY 1 cut(s) 973
Bsu36I CCTNAGG 1 cut(s) 177
BsuI GTATCC 1 cut(s) 1031
BsuRI GGCC 5 cut(s) 5, 119, 584, 797, 833
BtgI CCRYGG 1 cut(s) 1119
BtgZI GCGATG 1 cut(s) 265
BtsCI GGATG 5 cut(s) 142, 508, 548, 1062, 1192
BtsI GCAGTG 2 cut(s) 227, 291
BtsIMutI CAGTG 4 cut(s) 227, 291, 329, 569
Cac8I GCNNGC 5 cut(s) 259, 582, 666, 799, 1074
CfoI GCGC 7 cut(s) 83, 234, 263, 435, 647, 666, 668
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 8 cut(s) 117, 118, 317, 514, 583, 679, 1127, 1219
Cfr9I CCCGGG 1 cut(s) 114
Csp6I GTAC 1 cut(s) 784
CviAII CATG 3 cut(s) 290, 661, 670
CviQI GTAC 1 cut(s) 784
DdeI CTNAG 5 cut(s) 177, 217, 1092, 1098, 1227
DpnI GATC 3 cut(s) 674, 975, 1068
DpnII GATC 3 cut(s) 672, 973, 1066
DraIII CACNNNGTG 2 cut(s) 853, 1023
EaeI YGGCCR 1 cut(s) 831
Eam1104I CTCTTC 2 cut(s) 527, 1188
EarI CTCTTC 2 cut(s) 527, 1188
EciI GGCGGA 1 cut(s) 360
Eco24I GRGCYC 1 cut(s) 121
Eco31I GGTCTC 1 cut(s) 729
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 5 cut(s) 317, 514, 679, 1127, 1219
Eco81I CCTNAGG 1 cut(s) 177
Eco88I CYCGRG 6 cut(s) 9, 40, 114, 267, 750, 1133
Eco91I GGTNACC 2 cut(s) 484, 1202
EcoNI CCTNNNNNAGG 1 cut(s) 387
EcoO109I RGGNCCY 4 cut(s) 118, 514, 679, 1127
EcoO65I GGTNACC 2 cut(s) 484, 1202
EcoRII CCWGG 7 cut(s) 319, 462, 480, 509, 989, 1041, 1221
EcoRV GATATC 1 cut(s) 808
EcoT38I GRGCYC 1 cut(s) 121
FaeI CATG 3 cut(s) 293, 664, 673
FaiI YATR 7 cut(s) 104, 291, 299, 540, 662, 671, 1035
FalI AAGNNNNNCTT 2 cut(s) 1182, 1214
FaqI GGGAC 9 cut(s) 221, 228, 323, 370, 527, 559, 692, 860, 1100
FatI CATG 3 cut(s) 289, 660, 669
FauI CCCGC 1 cut(s) 76
Fnu4HI GCNGC 6 cut(s) 374, 377, 380, 939, 942, 987
FokI GGATG 5 cut(s) 149, 515, 535, 1069, 1199
FriOI GRGCYC 1 cut(s) 121
Fsp4HI GCNGC 6 cut(s) 374, 377, 380, 939, 942, 987
FspBI CTAG 1 cut(s) 389
GlaI GCGC 7 cut(s) 82, 233, 262, 434, 646, 665, 667
GluI GCNGC 6 cut(s) 374, 377, 380, 939, 942, 987
GsaI CCCAGC 2 cut(s) 1111, 1211
GsuI CTGGAG 1 cut(s) 493
HaeII RGCGCY 1 cut(s) 436
HaeIII GGCC 5 cut(s) 5, 119, 584, 797, 833
HapII CCGG 8 cut(s) 115, 158, 246, 341, 495, 676, 945, 1054
HhaI GCGC 7 cut(s) 83, 234, 263, 435, 647, 666, 668
Hin1II CATG 3 cut(s) 293, 664, 673
Hin6I GCGC 7 cut(s) 81, 232, 261, 433, 645, 664, 666
HinP1I GCGC 7 cut(s) 81, 232, 261, 433, 645, 664, 666
HindIII AAGCTT 1 cut(s) 923
HpaII CCGG 8 cut(s) 115, 158, 246, 341, 495, 676, 945, 1054
HphI GGTGA 4 cut(s) 103, 484, 496, 1214
Hpy166II GTNNAC 3 cut(s) 317, 784, 1017
Hpy188I TCNGA 5 cut(s) 220, 733, 762, 981, 1177
Hpy8I GTNNAC 3 cut(s) 317, 784, 1017
HpyAV CCTTC 5 cut(s) 493, 499, 602, 713, 1210
HpyCH4III ACNGT 3 cut(s) 573, 781, 845
HpyCH4IV ACGT 2 cut(s) 190, 241
HpyCH4V TGCA 2 cut(s) 289, 907
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 379, 1082
HpyF3I CTNAG 5 cut(s) 177, 217, 1092, 1098, 1227
HpySE526I ACGT 2 cut(s) 190, 241
Hsp92II CATG 3 cut(s) 293, 664, 673
HspAI GCGC 7 cut(s) 81, 232, 261, 433, 645, 664, 666
Kzo9I GATC 3 cut(s) 672, 973, 1066
LguI GCTCTTC 1 cut(s) 1188
LmnI GCTCC 5 cut(s) 268, 370, 401, 823, 935
Lsp1109I GCAGC 2 cut(s) 928, 973
LweI GCATC 2 cut(s) 557, 766
MaeI CTAG 1 cut(s) 389
MaeII ACGT 2 cut(s) 190, 241
MaeIII GTNAC 4 cut(s) 149, 484, 845, 1202
MalI GATC 3 cut(s) 674, 975, 1068
MboI GATC 3 cut(s) 672, 973, 1066
MflI RGATCY 1 cut(s) 973
MhlI GDGCHC 1 cut(s) 121
MlsI TGGCCA 1 cut(s) 833
MluCI AATT 2 cut(s) 251, 274
MluNI TGGCCA 1 cut(s) 833
MlyI GAGTC 7 cut(s) 38, 52, 743, 763, 882, 908, 1097
Mox20I TGGCCA 1 cut(s) 833
MscI TGGCCA 1 cut(s) 833
MseI TTAA 2 cut(s) 684, 714
MslI CAYNNNNRTG 2 cut(s) 57, 284
Msp20I TGGCCA 1 cut(s) 833
MspA1I CMGCKG 1 cut(s) 941
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 8 cut(s) 115, 158, 246, 341, 495, 676, 945, 1054
MvaI CCWGG 7 cut(s) 321, 464, 482, 511, 991, 1043, 1223
MvnI CGCG 4 cut(s) 83, 234, 647, 666
MwoI GCNNNNNNNGC 3 cut(s) 11, 379, 1082
NciI CCSGG 7 cut(s) 115, 116, 246, 341, 496, 677, 1054
NdeII GATC 3 cut(s) 672, 973, 1066
NlaIII CATG 3 cut(s) 293, 664, 673
NlaIV GGNNCC 7 cut(s) 119, 366, 515, 585, 680, 937, 1128
NmeAIII GCCGAG 1 cut(s) 916
NmuCI GTSAC 4 cut(s) 149, 484, 845, 1202
PaeR7I CTCGAG 3 cut(s) 40, 267, 750
PauI GCGCGC 1 cut(s) 664
PciSI GCTCTTC 1 cut(s) 1188
PcsI WCGNNNNNNNCGW 1 cut(s) 798
PfeI GAWTC 4 cut(s) 344, 412, 476, 956
PfoI TCCNGGA 3 cut(s) 244, 339, 675
PkrI GCNGC 6 cut(s) 375, 378, 381, 940, 943, 988
PleI GAGTC 7 cut(s) 37, 51, 742, 763, 881, 907, 1097
PpsI GAGTC 7 cut(s) 37, 51, 742, 763, 881, 907, 1097
PpuMI RGGWCCY 3 cut(s) 514, 679, 1127
Psp5II RGGWCCY 3 cut(s) 514, 679, 1127
Psp6I CCWGG 7 cut(s) 319, 462, 480, 509, 989, 1041, 1221
PspEI GGTNACC 2 cut(s) 484, 1202
PspFI CCCAGC 2 cut(s) 1107, 1207
PspGI CCWGG 7 cut(s) 319, 462, 480, 509, 989, 1041, 1221
PspN4I GGNNCC 7 cut(s) 119, 366, 515, 585, 680, 937, 1128
PspOMI GGGCCC 1 cut(s) 117
PspPI GGNCC 8 cut(s) 117, 118, 317, 514, 583, 679, 1127, 1219
PspPPI RGGWCCY 3 cut(s) 514, 679, 1127
PspXI VCTCGAGB 1 cut(s) 40
PsuI RGATCY 1 cut(s) 973
PteI GCGCGC 1 cut(s) 664
RsaI GTAC 1 cut(s) 785
RsaNI GTAC 1 cut(s) 784
RseI CAYNNNNRTG 2 cut(s) 57, 284
SapI GCTCTTC 1 cut(s) 1188
SaqAI TTAA 2 cut(s) 684, 714
SatI GCNGC 6 cut(s) 374, 377, 380, 939, 942, 987
Sau3AI GATC 3 cut(s) 672, 973, 1066
Sau96I GGNCC 8 cut(s) 117, 118, 317, 514, 583, 679, 1127, 1219
SchI GAGTC 7 cut(s) 38, 52, 743, 763, 882, 908, 1097
SduI GDGCHC 1 cut(s) 121
SfaNI GCATC 2 cut(s) 557, 766
Sfr274I CTCGAG 3 cut(s) 40, 267, 750
SinI GGWCC 5 cut(s) 317, 514, 679, 1127, 1219
SlaI CTCGAG 3 cut(s) 40, 267, 750
SmaI CCCGGG 1 cut(s) 116
SmiMI CAYNNNNRTG 2 cut(s) 57, 284
SmlI CTYRAG 7 cut(s) 40, 69, 267, 683, 750, 818, 1145
SmoI CTYRAG 7 cut(s) 40, 69, 267, 683, 750, 818, 1145
Sse9I AATT 2 cut(s) 251, 274
SsiI CCGC 8 cut(s) 83, 234, 371, 374, 377, 380, 914, 939
SspMI CTAG 1 cut(s) 389
TaaI ACNGT 3 cut(s) 573, 781, 845
TaiI ACGT 2 cut(s) 193, 244
TaqI TCGA 9 cut(s) 41, 268, 449, 699, 739, 751, 792, 918, 928
TaqII GACCGA 1 cut(s) 717
TasI AATT 2 cut(s) 251, 274
TatI WGTACW 1 cut(s) 783
TauI GCSGC 4 cut(s) 376, 379, 382, 941
TfiI GAWTC 4 cut(s) 344, 412, 476, 956
Tru1I TTAA 2 cut(s) 684, 714
Tru9I TTAA 2 cut(s) 684, 714
TscAI CASTG 4 cut(s) 234, 291, 336, 576
TseFI GTSAC 4 cut(s) 149, 484, 845, 1202
TseI GCWGC 2 cut(s) 941, 986
Tsp45I GTSAC 4 cut(s) 149, 484, 845, 1202
TspDTI ATGAA 5 cut(s) 268, 648, 649, 779, 1203
TspGWI ACGGA 3 cut(s) 324, 1034, 1136
TspMI CCCGGG 1 cut(s) 114
TspRI CASTG 4 cut(s) 234, 291, 336, 576
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 5 cut(s) 317, 514, 679, 1127, 1219
XagI CCTNNNNNAGG 1 cut(s) 387
XhoI CTCGAG 3 cut(s) 40, 267, 750
XmaI CCCGGG 1 cut(s) 114
XspI CTAG 1 cut(s) 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.