FvH4_6g25501

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000087
Physical Location & Seq
Reverse (-)
19438813 .. 19440083
1271 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g25501.t1

Sequence Viewer

Length: 1017 bp
ATGACAGATCCGGTGTGGGTGTCTAGCGAGGAGATTGTGGTTGTCTCTAGCTCGCCTGATCCTGATTCAGACACCTTGCACCGGTGGGAGGAGGAGTTGGATTATCTTATGGCGGAGGTTGCACTTGACTTAGGGGAGGGCATTCCTGTTACGGATGCAGGGTCTCATGTGTCCTTGTCTGACCCTCTATTGCAGGAGGTAGAAGAGTTTAGCATGGCGAGATCTTGGGAGGTGGACGACTTGTTCTGGGATCCTCCTGGCGAGAGTATGACGTTGTCAGAGTTAAAAGCTCTTAGGCAGAATTGGAGTATTCCCGATGAGGTCTTATTATGGCCTCTCGGCAAGGGCGTTAAGTTTTTTGACCCGCCGGACAACTTCACGCTGGTATACGAGTACCAGCTAAGATGCGGGTTGATGTTCCCGCTACCCCCTTTTGCGCAGTACACTTTAACGTGTCTGCATGTCGCCCCGGGGCAAGTCACCCCGAATATGTTGAGGCAAATATTGGGGATGGGGCTGGGGTTGCGTGAGGTTGAAGTCCCAAGGGAAATTCAAGATTCTAGTGGAAGACTTGCCCACCTCTACGAACGAGAGCTGGCGACAGAAGTGTTTTCTCGTCGGAGGGTAGTGGCAGGAGTGGCATGGACATCCCTTCCGGGTCCCGGGGCTTTCCAGAAAATAGTGCCCCAAGAGTATAAGTTAACCGAGTTGATGAAGCGTCGGATTCGCCAGGTGTTGTGGACATTTGAGTCTAGGAGCTCGTACCGGATATGCCGCCTTGGCATATATAGTCAGTTTGGTTACGCCTGGGTCCCGGTGATTATGCCTCGGGACGGTGGGTCGCAAAAGAAGGAAGGTCTGTACGACAAGGTTTCTGATGAGGATGTGTTGGATGGGTTGCATGCCGAGGCTGACCATGCCAAGCGGTACGATATCGATTTGGAGACTAGCGAAGGGAAGGAGGTGGAGCTGGACGAGGCTGAGGATGATTTTTTGAGGCTGAGGATGATTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

339

Amino Acids

38.58

Weight (kDa)

4.57

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 748
Acc16I TGCGCA 1 cut(s) 438
AccI GTMKAC 1 cut(s) 387
AciI CCGC 6 cut(s) 113, 365, 408, 422, 775, 925
AclWI GGATC 4 cut(s) 2, 53, 245, 258
AcsI RAATTY 1 cut(s) 549
AfaI GTAC 5 cut(s) 395, 443, 764, 863, 929
AfiI CCNNNNNNNGG 4 cut(s) 81, 88, 662, 833
AflIII ACRYGT 1 cut(s) 452
AgeI ACCGGT 1 cut(s) 81
AgsI TTSAA 2 cut(s) 536, 554
AhdI GACNNNNNGTC 1 cut(s) 838
AjnI CCWGG 3 cut(s) 256, 729, 806
AloI GAACNNNNNNTCC 2 cut(s) 227, 259
AluBI AGCT 6 cut(s) 51, 290, 400, 595, 759, 970
AluI AGCT 6 cut(s) 51, 290, 400, 595, 759, 970
Alw21I GWGCWC 1 cut(s) 761
Alw26I GTCTC 3 cut(s) 49, 168, 938
AlwI GGATC 4 cut(s) 2, 53, 245, 258
Ama87I CYCGRG 3 cut(s) 469, 662, 828
AoxI GGCC 1 cut(s) 332
ApoI RAATTY 1 cut(s) 549
AsiGI ACCGGT 1 cut(s) 81
AspLEI GCGC 1 cut(s) 439
AspS9I GGNCC 2 cut(s) 659, 811
AsuC2I CCSGG 6 cut(s) 470, 471, 657, 663, 664, 815
AsuHPI GGTGA 2 cut(s) 472, 829
AvaI CYCGRG 3 cut(s) 469, 662, 828
AvaII GGWCC 2 cut(s) 659, 811
BaeGI GKGCMC 1 cut(s) 687
BamHI GGATCC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 761
BbsI GAAGAC 1 cut(s) 574
Bbv12I GWGCWC 1 cut(s) 761
BbvCI CCTCAGC 2 cut(s) 981, 1001
BccI CCATC 2 cut(s) 505, 887
BciT130I CCWGG 3 cut(s) 258, 731, 808
BcnI CCSGG 6 cut(s) 470, 471, 657, 663, 664, 815
BcoDI GTCTC 3 cut(s) 49, 168, 938
BfaI CTAG 5 cut(s) 24, 48, 561, 753, 948
BglI GCCNNNNNGGC 1 cut(s) 780
BglII AGATCT 1 cut(s) 221
BisI GCNGC 1 cut(s) 775
BlsI GCNGC 1 cut(s) 776
Bme1390I CCNGG 9 cut(s) 258, 470, 471, 657, 663, 664, 731, 808, 815
Bme18I GGWCC 2 cut(s) 659, 811
BmeRI GACNNNNNGTC 1 cut(s) 838
BmeT110I CYCGRG 3 cut(s) 469, 662, 828
BmgT120I GGNCC 2 cut(s) 659, 811
BmiI GGNNCC 5 cut(s) 252, 660, 661, 812, 813
BmrFI CCNGG 9 cut(s) 258, 470, 471, 657, 663, 664, 731, 808, 815
BmsI GCATC 2 cut(s) 145, 395
BpiI GAAGAC 1 cut(s) 574
Bpu10I CCTNAGC 2 cut(s) 981, 1001
BpuMI CCSGG 6 cut(s) 470, 471, 657, 663, 664, 815
Bsa29I ATCGAT 1 cut(s) 936
BsaI GGTCTC 1 cut(s) 168
BsaWI WCCGGW 3 cut(s) 10, 81, 765
BsaXI ACNNNNNCTCC 2 cut(s) 80, 110
Bsc4I CCNNNNNNNGG 4 cut(s) 81, 88, 662, 833
Bse118I RCCGGY 1 cut(s) 81
BseBI CCWGG 3 cut(s) 258, 731, 808
BseCI ATCGAT 1 cut(s) 936
BseGI GGATG 7 cut(s) 160, 516, 647, 889, 898, 991, 1011
BseLI CCNNNNNNNGG 4 cut(s) 81, 88, 662, 833
BseMII CTCAG 2 cut(s) 972, 992
BseRI GAGGAG 3 cut(s) 44, 104, 107
BseSI GKGCMC 1 cut(s) 687
BseYI CCCAGC 1 cut(s) 517
BshFI GGCC 1 cut(s) 334
BshTI ACCGGT 1 cut(s) 81
BshVI ATCGAT 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 761
BsiHKCI CYCGRG 3 cut(s) 469, 662, 828
BsiSI CCGG 8 cut(s) 11, 82, 368, 470, 656, 663, 766, 815
BslFI GGGAC 4 cut(s) 524, 645, 797, 845
BslI CCNNNNNNNGG 4 cut(s) 81, 88, 662, 833
BsmAI GTCTC 3 cut(s) 49, 168, 938
BsmFI GGGAC 4 cut(s) 524, 645, 797, 845
BsmI GAATGC 1 cut(s) 141
BsnI GGCC 1 cut(s) 334
Bso31I GGTCTC 1 cut(s) 168
BsoBI CYCGRG 3 cut(s) 469, 662, 828
Bsp1286I GDGCHC 2 cut(s) 687, 761
Bsp143I GATC 4 cut(s) 7, 58, 221, 250
BspACI CCGC 6 cut(s) 113, 365, 408, 422, 775, 925
BspANI GGCC 1 cut(s) 334
BspCNI CTCAG 2 cut(s) 973, 993
BspDI ATCGAT 1 cut(s) 936
BspLI GGNNCC 5 cut(s) 252, 660, 661, 812, 813
BspPI GGATC 4 cut(s) 2, 53, 245, 258
BspTNI GGTCTC 1 cut(s) 168
BsrFI RCCGGY 1 cut(s) 81
BssAI RCCGGY 1 cut(s) 81
BssMI GATC 4 cut(s) 7, 58, 221, 250
BssNAI GTATAC 1 cut(s) 388
BssT1I CCWWGG 2 cut(s) 542, 778
Bst1107I GTATAC 1 cut(s) 388
Bst2UI CCWGG 3 cut(s) 258, 731, 808
Bst4CI ACNGT 1 cut(s) 836
Bst6I CTCTTC 1 cut(s) 198
BstC8I GCNNGC 3 cut(s) 53, 597, 903
BstDEI CTNAG 5 cut(s) 130, 293, 401, 981, 1001
BstF5I GGATG 7 cut(s) 160, 516, 647, 889, 898, 991, 1011
BstHHI GCGC 1 cut(s) 439
BstKTI GATC 4 cut(s) 10, 61, 224, 253
BstMAI GTCTC 3 cut(s) 49, 168, 938
BstMBI GATC 4 cut(s) 7, 58, 221, 250
BstMWI GCNNNNNNNGC 5 cut(s) 119, 523, 638, 780, 917
BstNI CCWGG 3 cut(s) 258, 731, 808
BstNSI RCATGY 2 cut(s) 464, 905
BstSCI CCNGG 9 cut(s) 256, 468, 469, 655, 661, 662, 729, 806, 813
BstSLI GKGCMC 1 cut(s) 687
BstV2I GAAGAC 1 cut(s) 574
BstX2I RGATCY 3 cut(s) 7, 221, 250
BstYI RGATCY 3 cut(s) 7, 221, 250
BstZ17I GTATAC 1 cut(s) 388
Bsu15I ATCGAT 1 cut(s) 936
BsuRI GGCC 1 cut(s) 334
BsuTUI ATCGAT 1 cut(s) 936
BtsCI GGATG 7 cut(s) 160, 516, 647, 889, 898, 991, 1011
Cac8I GCNNGC 3 cut(s) 53, 597, 903
CfoI GCGC 1 cut(s) 439
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 2 cut(s) 659, 811
Cfr9I CCCGGG 2 cut(s) 469, 662
ClaI ATCGAT 1 cut(s) 936
CseI GACGC 1 cut(s) 707
Csp6I GTAC 5 cut(s) 394, 442, 763, 862, 928
CspAI ACCGGT 1 cut(s) 81
CviAII CATG 6 cut(s) 167, 214, 461, 642, 902, 917
CviQI GTAC 5 cut(s) 394, 442, 763, 862, 928
DdeI CTNAG 5 cut(s) 130, 293, 401, 981, 1001
DpnI GATC 4 cut(s) 9, 60, 223, 252
DpnII GATC 4 cut(s) 7, 58, 221, 250
DrdI GACNNNNNNGTC 1 cut(s) 748
DriI GACNNNNNGTC 1 cut(s) 838
DseDI GACNNNNNNGTC 1 cut(s) 748
Eam1104I CTCTTC 1 cut(s) 198
Eam1105I GACNNNNNGTC 1 cut(s) 838
EarI CTCTTC 1 cut(s) 198
EciI GGCGGA 1 cut(s) 128
Ecl136II GAGCTC 1 cut(s) 759
Eco130I CCWWGG 2 cut(s) 542, 778
Eco24I GRGCYC 1 cut(s) 761
Eco31I GGTCTC 1 cut(s) 168
Eco32I GATATC 1 cut(s) 934
Eco47I GGWCC 2 cut(s) 659, 811
Eco53kI GAGCTC 1 cut(s) 759
Eco88I CYCGRG 3 cut(s) 469, 662, 828
EcoICRI GAGCTC 1 cut(s) 759
EcoO109I RGGNCCY 2 cut(s) 659, 811
EcoRII CCWGG 3 cut(s) 256, 729, 806
EcoRV GATATC 1 cut(s) 934
EcoT14I CCWWGG 2 cut(s) 542, 778
EcoT38I GRGCYC 1 cut(s) 761
ErhI CCWWGG 2 cut(s) 542, 778
FaeI CATG 6 cut(s) 170, 217, 464, 645, 905, 920
FaqI GGGAC 4 cut(s) 524, 645, 797, 845
FatI CATG 6 cut(s) 166, 213, 460, 641, 901, 916
FauI CCCGC 3 cut(s) 372, 401, 429
FblI GTMKAC 1 cut(s) 387
Fnu4HI GCNGC 1 cut(s) 775
FokI GGATG 6 cut(s) 167, 523, 634, 896, 905, 998
FriOI GRGCYC 1 cut(s) 761
Fsp4HI GCNGC 1 cut(s) 775
FspBI CTAG 5 cut(s) 24, 48, 561, 753, 948
FspI TGCGCA 1 cut(s) 438
GlaI GCGC 1 cut(s) 438
GluI GCNGC 1 cut(s) 775
GsaI CCCAGC 1 cut(s) 521
HaeIII GGCC 1 cut(s) 334
HapII CCGG 8 cut(s) 11, 82, 368, 470, 656, 663, 766, 815
HgaI GACGC 1 cut(s) 707
HhaI GCGC 1 cut(s) 439
Hin1II CATG 6 cut(s) 170, 217, 464, 645, 905, 920
Hin6I GCGC 1 cut(s) 437
HinP1I GCGC 1 cut(s) 437
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HinfI GANTC 4 cut(s) 65, 557, 724, 749
HpaI GTTAAC 1 cut(s) 702
HpaII CCGG 8 cut(s) 11, 82, 368, 470, 656, 663, 766, 815
HphI GGTGA 2 cut(s) 472, 829
Hpy166II GTNNAC 5 cut(s) 235, 388, 444, 702, 741
Hpy188I TCNGA 6 cut(s) 70, 181, 280, 621, 723, 877
Hpy188III TCNNGA 5 cut(s) 62, 314, 554, 673, 830
Hpy8I GTNNAC 5 cut(s) 235, 388, 444, 702, 741
Hpy99I CGWCG 2 cut(s) 621, 723
HpyAV CCTTC 5 cut(s) 662, 844, 848, 947, 952
HpyCH4III ACNGT 1 cut(s) 836
HpyCH4IV ACGT 2 cut(s) 272, 452
HpyCH4V TGCA 6 cut(s) 79, 122, 158, 193, 460, 901
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 523, 638, 780, 917
HpyF3I CTNAG 5 cut(s) 130, 293, 401, 981, 1001
HpySE526I ACGT 2 cut(s) 272, 452
Hsp92II CATG 6 cut(s) 170, 217, 464, 645, 905, 920
HspAI GCGC 1 cut(s) 437
KflI GGGWCCC 2 cut(s) 659, 811
KspAI GTTAAC 1 cut(s) 702
Kzo9I GATC 4 cut(s) 7, 58, 221, 250
LmnI GCTCC 2 cut(s) 756, 967
LweI GCATC 2 cut(s) 145, 395
MaeI CTAG 5 cut(s) 24, 48, 561, 753, 948
MaeII ACGT 2 cut(s) 272, 452
MaeIII GTNAC 3 cut(s) 148, 478, 800
MalI GATC 4 cut(s) 9, 60, 223, 252
MboI GATC 4 cut(s) 7, 58, 221, 250
MboII GAAGA 2 cut(s) 215, 579
MflI RGATCY 3 cut(s) 7, 221, 250
MhlI GDGCHC 2 cut(s) 687, 761
MluCI AATT 2 cut(s) 301, 549
MlyI GAGTC 1 cut(s) 758
MmeI TCCRAC 4 cut(s) 78, 599, 701, 870
MseI TTAA 4 cut(s) 284, 351, 449, 701
MspI CCGG 8 cut(s) 11, 82, 368, 470, 656, 663, 766, 815
MspR9I CCNGG 9 cut(s) 258, 470, 471, 657, 663, 664, 731, 808, 815
Mva1269I GAATGC 1 cut(s) 141
MvaI CCWGG 3 cut(s) 258, 731, 808
MwoI GCNNNNNNNGC 5 cut(s) 119, 523, 638, 780, 917
NciI CCSGG 6 cut(s) 470, 471, 657, 663, 664, 815
NdeII GATC 4 cut(s) 7, 58, 221, 250
NlaIII CATG 6 cut(s) 170, 217, 464, 645, 905, 920
NlaIV GGNNCC 5 cut(s) 252, 660, 661, 812, 813
NmeAIII GCCGAG 2 cut(s) 318, 931
NmuCI GTSAC 1 cut(s) 478
NsbI TGCGCA 1 cut(s) 438
NspI RCATGY 2 cut(s) 464, 905
PaeI GCATGC 1 cut(s) 905
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PctI GAATGC 1 cut(s) 141
PfeI GAWTC 3 cut(s) 65, 557, 724
PflFI GACNNNGTC 1 cut(s) 274
PinAI ACCGGT 1 cut(s) 81
PkrI GCNGC 1 cut(s) 776
PleI GAGTC 1 cut(s) 757
PpsI GAGTC 1 cut(s) 757
PpuMI RGGWCCY 2 cut(s) 659, 811
Psp124BI GAGCTC 1 cut(s) 761
Psp5II RGGWCCY 2 cut(s) 659, 811
Psp6I CCWGG 3 cut(s) 256, 729, 806
PspFI CCCAGC 1 cut(s) 517
PspGI CCWGG 3 cut(s) 256, 729, 806
PspN4I GGNNCC 5 cut(s) 252, 660, 661, 812, 813
PspPI GGNCC 2 cut(s) 659, 811
PspPPI RGGWCCY 2 cut(s) 659, 811
PsuI RGATCY 3 cut(s) 7, 221, 250
PsyI GACNNNGTC 1 cut(s) 274
RsaI GTAC 5 cut(s) 395, 443, 764, 863, 929
RsaNI GTAC 5 cut(s) 394, 442, 763, 862, 928
SacI GAGCTC 1 cut(s) 761
SaqAI TTAA 4 cut(s) 284, 351, 449, 701
SatI GCNGC 1 cut(s) 775
Sau3AI GATC 4 cut(s) 7, 58, 221, 250
Sau96I GGNCC 2 cut(s) 659, 811
SchI GAGTC 1 cut(s) 758
ScrFI CCNGG 9 cut(s) 258, 470, 471, 657, 663, 664, 731, 808, 815
SduI GDGCHC 2 cut(s) 687, 761
SfaNI GCATC 2 cut(s) 145, 395
SgrAI CRCCGGYG 1 cut(s) 81
SinI GGWCC 2 cut(s) 659, 811
SmaI CCCGGG 2 cut(s) 471, 664
SphI GCATGC 1 cut(s) 905
Sse9I AATT 2 cut(s) 301, 549
SsiI CCGC 6 cut(s) 113, 365, 408, 422, 775, 925
SspI AATATT 1 cut(s) 504
SspMI CTAG 5 cut(s) 24, 48, 561, 753, 948
SstI GAGCTC 1 cut(s) 761
StyD4I CCNGG 9 cut(s) 256, 468, 469, 655, 661, 662, 729, 806, 813
StyI CCWWGG 2 cut(s) 542, 778
TaaI ACNGT 1 cut(s) 836
TaiI ACGT 2 cut(s) 275, 455
TaqI TCGA 1 cut(s) 936
TasI AATT 2 cut(s) 301, 549
TatI WGTACW 1 cut(s) 441
TauI GCSGC 1 cut(s) 777
TfiI GAWTC 3 cut(s) 65, 557, 724
Tru1I TTAA 4 cut(s) 284, 351, 449, 701
Tru9I TTAA 4 cut(s) 284, 351, 449, 701
TseFI GTSAC 1 cut(s) 478
Tsp45I GTSAC 1 cut(s) 478
TspDTI ATGAA 1 cut(s) 728
TspGWI ACGGA 1 cut(s) 167
TspMI CCCGGG 2 cut(s) 469, 662
Tth111I GACNNNGTC 1 cut(s) 274
VpaK11BI GGWCC 2 cut(s) 659, 811
XapI RAATTY 1 cut(s) 549
XceI RCATGY 2 cut(s) 464, 905
XmaI CCCGGG 2 cut(s) 469, 662
XmiI GTMKAC 1 cut(s) 387
XspI CTAG 5 cut(s) 24, 48, 561, 753, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.