Rmu_sc0000744.1_g000078

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000744.1
OG0000087
Physical Location & Seq
Reverse (-)
270444 .. 272853
2410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000744.1_g000078.1.cds

Sequence Viewer

Length: 2166 bp
atggtcttggttttgcatgaatttctgggtatttctgggttttgggttgaatttctgggttttggcttgaatttctgggttttggctaggctaacccttgtgcttctggttccagatatagcgagatttgaggtccccggtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgtcaggcaagctgaagtggatatcgaccggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtggatctgcggaggccccgatagtcacagtggccattcccgagggcataccgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgcgacttaggtgggggatacaggacacggtggatcttaggcctctcagggatggagagatgaccgcgaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctaccgctaccccggtgcctgcagtatctgctgcggatgctgaacctgtccccggggcaactgaccccgaatgccattcgccaaatatacagtatgatggctatgtgggacttgtgccaacaagggttgccttccataaacgaattccgtgctgtacatcgggtactgtactcaaggaagcaatcttgtgcgggtacggttacatttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaagtcgtatagtcaaatacgaagtagaaaggaagaggatagcccgggtatatgctgtttggtcagagaaagagaggagctcttgtagattcatccgacactctatactttataggctagggctagggtggctccctgtgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacagaatggatgatgcccaattgatggatatgctgatgggccagggggaagacgcccttcatatcgatgtcgacctagggtcgaaaggtacaagtcggtcaattgaagaaacccttcttgagatcaccgatgagggatatggtgaacctgaccctgtcgctcccgtgacccacgtcgtgcagccctccatggccgacgttattacgatagatgacaccgggacgggaaaggtaccggcccccgtgcccatttcctctcgttccactgggagcgatgaagcattgcttcctggcgagaagaagagatcccataggcaccagcatcggactgataaggaggtgacgtacactggccgggatgttcaagggtttggtgcgaagaggcagaagaaagatcacccaggaccagagtcgtcgccttttcttggcttgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgctttgtgacctgaaggatattgacctcgaccgggttcgggccaaggataatactccccaggagaatcgccgtcttgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctaaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagttggagaaggaacggaactcattgaaggctgagatggccgccgctaagcagctgatcgcggagcttgagggtgaagtctcggaggcgcgggaagaggtaaaaaacgcccgggactccaagaaaaaatctgcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggtcgtggaggagtacaagtcctcggaagagctcatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaggagtgggtggcggccggatatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagacggggaggcggcggccaagtctggtgccggtgggtcccagagtaccggtggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

721

Amino Acids

80.31

Weight (kDa)

5.97

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1705
Acc36I ACCTGC 1 cut(s) 1705
Acc65I GGTACC 2 cut(s) 140, 1246
AccB1I GGYRCC 5 cut(s) 140, 591, 1246, 1329, 2126
AccB7I CCANNNNNTGG 1 cut(s) 1039
AccBSI CCGCTC 1 cut(s) 2158
AccI GTMKAC 2 cut(s) 383, 1086
AccII CGCG 4 cut(s) 518, 1805, 1834, 1934
AclWI GGATC 7 cut(s) 193, 267, 280, 331, 492, 1314, 1929
AcoI YGGCCR 6 cut(s) 351, 1206, 1366, 1782, 2043, 2115
AcsI RAATTY 6 cut(s) 20, 50, 70, 719, 2024, 2066
AcuI CTGAAG 2 cut(s) 237, 1571
AcyI GRCGYC 2 cut(s) 1068, 1662
AdeI CACNNNGTG 1 cut(s) 1192
AgeI ACCGGT 2 cut(s) 231, 2147
AgsI TTSAA 7 cut(s) 50, 70, 1121, 1379, 1645, 1771, 2029
AhdI GACNNNNNGTC 1 cut(s) 1093
AhlI ACTAGT 1 cut(s) 805
AjiI CACGTC 1 cut(s) 1189
AjnI CCWGG 7 cut(s) 167, 1056, 1303, 1414, 1596, 1914, 2082
AjuI GAANNNNNNNTTGG 2 cut(s) 1730, 1762
AloI GAACNNNNNNTCC 2 cut(s) 257, 289
AluBI AGCT 8 cut(s) 215, 559, 915, 1492, 1798, 1810, 1978, 2063
AluI AGCT 8 cut(s) 215, 559, 915, 1492, 1798, 1810, 1978, 2063
Alw21I GWGCWC 2 cut(s) 917, 1980
Alw26I GTCTC 2 cut(s) 1828, 2084
AlwI GGATC 7 cut(s) 193, 267, 280, 331, 492, 1314, 1929
AlwNI CAGNNNCTG 3 cut(s) 604, 1495, 1883
Ama87I CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
ApeKI GCWGC 8 cut(s) 544, 607, 1195, 1489, 1492, 1795, 1994, 1997
ApoI RAATTY 6 cut(s) 20, 50, 70, 719, 2024, 2066
AsiGI ACCGGT 2 cut(s) 231, 2147
Asp700I GAANNNNTTC 1 cut(s) 1128
Asp718I GGTACC 2 cut(s) 140, 1246
AspA2I CCTAGG 1 cut(s) 1090
AspLEI GCGC 3 cut(s) 544, 982, 1834
AspS9I GGNCC 9 cut(s) 133, 334, 399, 1054, 1252, 1418, 1533, 1578, 2136
AsuHPI GGTGA 6 cut(s) 1132, 1169, 1366, 1403, 1729, 1829
AvaI CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
AvaII GGWCC 5 cut(s) 133, 399, 1418, 1533, 2136
AvrII CCTAGG 1 cut(s) 1090
BaeGI GKGCMC 2 cut(s) 1263, 1639
BaeI ACNNNNGTAYC 2 cut(s) 132, 165
BalI TGGCCA 1 cut(s) 353
BamHI GGATCC 1 cut(s) 272
BanI GGYRCC 5 cut(s) 140, 591, 1246, 1329, 2126
BanII GRGCYC 2 cut(s) 917, 1980
BauI CACGAG 2 cut(s) 548, 1943
BbsI GAAGAC 2 cut(s) 192, 1071
Bbv12I GWGCWC 2 cut(s) 917, 1980
BbvI GCAGC 8 cut(s) 531, 594, 1207, 1479, 1501, 1807, 1981, 1984
BccI CCATC 8 cut(s) 148, 389, 497, 667, 1033, 1045, 1490, 1774
BceAI ACGGC 2 cut(s) 1593, 1871
BcgI CGANNNNNNTGC 4 cut(s) 707, 741, 1319, 1353
BciT130I CCWGG 7 cut(s) 169, 1058, 1305, 1416, 1598, 1916, 2084
BciVI GTATCC 2 cut(s) 172, 462
BcoDI GTCTC 2 cut(s) 1828, 2084
BcuI ACTAGT 1 cut(s) 805
BfaI CTAG 6 cut(s) 87, 789, 806, 953, 959, 1091
BfmI CTRYAG 2 cut(s) 596, 1875
BfoI RGCGCY 2 cut(s) 545, 983
BfuAI ACCTGC 1 cut(s) 1705
BfuI GTATCC 2 cut(s) 172, 462
BlnI CCTAGG 1 cut(s) 1090
BlpI GCTNAGC 1 cut(s) 1791
Bme18I GGWCC 5 cut(s) 133, 399, 1418, 1533, 2136
BmeRI GACNNNNNGTC 1 cut(s) 1093
BmeT110I CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
BmgBI CACGTC 1 cut(s) 1189
BmgT120I GGNCC 9 cut(s) 133, 334, 399, 1054, 1252, 1418, 1533, 1578, 2136
BmrI ACTGGG 2 cut(s) 291, 1290
BmsI GCATC 4 cut(s) 603, 1018, 1345, 1620
BmuI ACTGGG 2 cut(s) 291, 1290
BoxI GACNNNNGTC 2 cut(s) 1187, 1423
BpiI GAAGAC 2 cut(s) 192, 1071
BplI GAGNNNNNCTC 2 cut(s) 899, 931
BpmI CTGGAG 2 cut(s) 1937, 2105
Bpu1102I GCTNAGC 1 cut(s) 1791
BpuEI CTTGAG 3 cut(s) 733, 1154, 1832
Bsa29I ATCGAT 1 cut(s) 1080
BsaBI GATNNNNATC 1 cut(s) 1680
BsaHI GRCGYC 2 cut(s) 1068, 1662
BsaI GGTCTC 1 cut(s) 2084
BsaWI WCCGGW 3 cut(s) 231, 1462, 2147
BsaXI ACNNNNNCTCC 6 cut(s) 904, 934, 1343, 1373, 1949, 1979
Bse118I RCCGGY 4 cut(s) 231, 1249, 2129, 2147
Bse1I ACTGG 4 cut(s) 196, 286, 1285, 1369
Bse3DI GCAATG 1 cut(s) 1295
Bse8I GATNNNNATC 1 cut(s) 1680
BseBI CCWGG 7 cut(s) 169, 1058, 1305, 1416, 1598, 1916, 2084
BseCI ATCGAT 1 cut(s) 1080
BseGI GGATG 7 cut(s) 159, 400, 508, 618, 927, 1030, 1378
BseJI GATNNNNATC 1 cut(s) 1680
BseMI GCAATG 1 cut(s) 1295
BseMII CTCAG 3 cut(s) 511, 1487, 1767
BseNI ACTGG 4 cut(s) 196, 286, 1285, 1369
BseRI GAGGAG 5 cut(s) 320, 925, 1025, 1706, 1970
BseSI GKGCMC 2 cut(s) 1263, 1639
BseX3I CGGCCG 1 cut(s) 2043
BseXI GCAGC 8 cut(s) 531, 594, 1207, 1479, 1501, 1807, 1981, 1984
BsgI GTGCAG 2 cut(s) 530, 1214
Bsh1236I CGCG 4 cut(s) 518, 1805, 1834, 1934
Bsh1285I CGRYCG 3 cut(s) 232, 1570, 2046
BshNI GGYRCC 5 cut(s) 140, 591, 1246, 1329, 2126
BshTI ACCGGT 2 cut(s) 231, 2147
BshVI ATCGAT 1 cut(s) 1080
BsiEI CGRYCG 3 cut(s) 232, 1570, 2046
BsiHKAI GWGCWC 2 cut(s) 917, 1980
BsiHKCI CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
BslFI GGGAC 7 cut(s) 119, 412, 610, 698, 1249, 1871, 2122
BsmAI GTCTC 2 cut(s) 1828, 2084
BsmFI GGGAC 7 cut(s) 119, 412, 610, 698, 1249, 1871, 2122
BsmI GAATGC 1 cut(s) 652
Bso31I GGTCTC 1 cut(s) 2084
BsoBI CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
Bsp1286I GDGCHC 4 cut(s) 917, 1263, 1639, 1980
Bsp1407I TGTACA 1 cut(s) 730
Bsp1720I GCTNAGC 1 cut(s) 1791
Bsp19I CCATGG 1 cut(s) 1203
BspCNI CTCAG 3 cut(s) 510, 1488, 1768
BspDI ATCGAT 1 cut(s) 1080
BspFNI CGCG 4 cut(s) 518, 1805, 1834, 1934
BspHI TCATGA 1 cut(s) 2019
BspMAI CTGCAG 2 cut(s) 600, 1879
BspMI ACCTGC 1 cut(s) 1705
BspPI GGATC 7 cut(s) 193, 267, 280, 331, 492, 1314, 1929
BspQI GCTCTTC 1 cut(s) 1968
BspT107I GGYRCC 5 cut(s) 140, 591, 1246, 1329, 2126
BspTNI GGTCTC 1 cut(s) 2084
BsrBI CCGCTC 1 cut(s) 2158
BsrDI GCAATG 1 cut(s) 1295
BsrFI RCCGGY 4 cut(s) 231, 1249, 2129, 2147
BsrGI TGTACA 1 cut(s) 730
BsrI ACTGG 4 cut(s) 196, 286, 1285, 1369
BssAI RCCGGY 4 cut(s) 231, 1249, 2129, 2147
BssNAI GTATAC 1 cut(s) 384
BssNI GRCGYC 2 cut(s) 1068, 1662
BssSI CACGAG 2 cut(s) 548, 1943
BssT1I CCWWGG 4 cut(s) 565, 1090, 1203, 1581
Bst1107I GTATAC 1 cut(s) 384
Bst2BI CACGAG 2 cut(s) 548, 1943
Bst2UI CCWGG 7 cut(s) 169, 1058, 1305, 1416, 1598, 1916, 2084
Bst4CI ACNGT 7 cut(s) 145, 349, 403, 481, 668, 744, 775
Bst6I CTCTTC 7 cut(s) 863, 980, 1310, 1388, 1646, 1833, 1968
BstACI GRCGYC 2 cut(s) 1068, 1662
BstAPI GCANNNNNTGC 2 cut(s) 604, 1883
BstAUI TGTACA 1 cut(s) 730
BstC8I GCNNGC 6 cut(s) 213, 596, 1635, 1666, 1992, 2156
BstDEI CTNAG 7 cut(s) 238, 458, 488, 497, 1496, 1776, 1791
BstDSI CCRYGG 2 cut(s) 1203, 1932
BstF5I GGATG 7 cut(s) 159, 400, 508, 618, 927, 1030, 1378
BstFNI CGCG 4 cut(s) 518, 1805, 1834, 1934
BstH2I RGCGCY 2 cut(s) 545, 983
BstHHI GCGC 3 cut(s) 544, 982, 1834
BstMAI GTCTC 2 cut(s) 1828, 2084
BstMCI CGRYCG 3 cut(s) 232, 1570, 2046
BstNI CCWGG 7 cut(s) 169, 1058, 1305, 1416, 1598, 1916, 2084
BstNSI RCATGY 2 cut(s) 454, 820
BstPAI GACNNNNGTC 2 cut(s) 1187, 1423
BstSFI CTRYAG 2 cut(s) 596, 1875
BstSLI GKGCMC 2 cut(s) 1263, 1639
BstUI CGCG 4 cut(s) 518, 1805, 1834, 1934
BstV1I GCAGC 8 cut(s) 531, 594, 1207, 1479, 1501, 1807, 1981, 1984
BstV2I GAAGAC 2 cut(s) 192, 1071
BstX2I RGATCY 4 cut(s) 272, 323, 484, 1319
BstYI RGATCY 4 cut(s) 272, 323, 484, 1319
BstZ17I GTATAC 1 cut(s) 384
BstZI CGGCCG 1 cut(s) 2043
Bsu15I ATCGAT 1 cut(s) 1080
BsuI GTATCC 2 cut(s) 172, 462
BsuTUI ATCGAT 1 cut(s) 1080
BtgI CCRYGG 2 cut(s) 1203, 1932
BtgZI GCGATG 2 cut(s) 1302, 1966
BtrI CACGTC 1 cut(s) 1189
BtsCI GGATG 7 cut(s) 159, 400, 508, 618, 927, 1030, 1378
BtsIMutI CAGTG 3 cut(s) 354, 1278, 1362
BveI ACCTGC 1 cut(s) 1705
Cac8I GCNNGC 6 cut(s) 213, 596, 1635, 1666, 1992, 2156
CaiI CAGNNNCTG 3 cut(s) 604, 1495, 1883
CciI TCATGA 1 cut(s) 2019
CfoI GCGC 3 cut(s) 544, 982, 1834
Cfr10I RCCGGY 4 cut(s) 231, 1249, 2129, 2147
Cfr13I GGNCC 9 cut(s) 133, 334, 399, 1054, 1252, 1418, 1533, 1578, 2136
Cfr42I CCGCGG 1 cut(s) 1935
Cfr9I CCCGGG 6 cut(s) 416, 529, 628, 879, 1617, 1854
ClaI ATCGAT 1 cut(s) 1080
CseI GACGC 2 cut(s) 1076, 1670
CspAI ACCGGT 2 cut(s) 231, 2147
CviAII CATG 8 cut(s) 17, 451, 817, 1204, 1537, 1730, 1893, 2020
DdeI CTNAG 7 cut(s) 238, 458, 488, 497, 1496, 1776, 1791
DraIII CACNNNGTG 1 cut(s) 1192
DriI GACNNNNNGTC 1 cut(s) 1093
EaeI YGGCCR 6 cut(s) 351, 1206, 1366, 1782, 2043, 2115
EagI CGGCCG 1 cut(s) 2043
Eam1104I CTCTTC 7 cut(s) 863, 980, 1310, 1388, 1646, 1833, 1968
Eam1105I GACNNNNNGTC 1 cut(s) 1093
EarI CTCTTC 7 cut(s) 863, 980, 1310, 1388, 1646, 1833, 1968
Ecl136II GAGCTC 2 cut(s) 915, 1978
EclXI CGGCCG 1 cut(s) 2043
Eco130I CCWWGG 4 cut(s) 565, 1090, 1203, 1581
Eco147I AGGCCT 1 cut(s) 493
Eco24I GRGCYC 2 cut(s) 917, 1980
Eco31I GGTCTC 1 cut(s) 2084
Eco32I GATATC 1 cut(s) 226
Eco47I GGWCC 5 cut(s) 133, 399, 1418, 1533, 2136
Eco52I CGGCCG 1 cut(s) 2043
Eco53kI GAGCTC 2 cut(s) 915, 1978
Eco57I CTGAAG 2 cut(s) 237, 1571
Eco88I CYCGRG 7 cut(s) 359, 416, 529, 628, 879, 1617, 1854
EcoICRI GAGCTC 2 cut(s) 915, 1978
EcoO109I RGGNCCY 3 cut(s) 133, 334, 2136
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 7 cut(s) 167, 1056, 1303, 1414, 1596, 1914, 2082
EcoRV GATATC 1 cut(s) 226
EcoT14I CCWWGG 4 cut(s) 565, 1090, 1203, 1581
EcoT38I GRGCYC 2 cut(s) 917, 1980
ErhI CCWWGG 4 cut(s) 565, 1090, 1203, 1581
FaeI CATG 8 cut(s) 20, 454, 820, 1207, 1540, 1733, 1896, 2023
FalI AAGNNNNNCTT 6 cut(s) 1056, 1088, 1113, 1145, 1284, 1316
FaqI GGGAC 7 cut(s) 119, 412, 610, 698, 1249, 1871, 2122
FatI CATG 8 cut(s) 16, 450, 816, 1203, 1536, 1729, 1892, 2019
FauI CCCGC 6 cut(s) 760, 1462, 1626, 1827, 1939, 2067
FblI GTMKAC 2 cut(s) 383, 1086
FokI GGATG 7 cut(s) 166, 407, 515, 625, 914, 1037, 1385
FriOI GRGCYC 2 cut(s) 917, 1980
FspBI CTAG 6 cut(s) 87, 789, 806, 953, 959, 1091
GlaI GCGC 3 cut(s) 543, 981, 1833
GsuI CTGGAG 2 cut(s) 1937, 2105
HaeII RGCGCY 2 cut(s) 545, 983
HgaI GACGC 2 cut(s) 1076, 1670
HhaI GCGC 3 cut(s) 544, 982, 1834
Hin1I GRCGYC 2 cut(s) 1068, 1662
Hin1II CATG 8 cut(s) 20, 454, 820, 1207, 1540, 1733, 1896, 2023
Hin6I GCGC 3 cut(s) 542, 980, 1832
HinP1I GCGC 3 cut(s) 542, 980, 1832
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HphI GGTGA 6 cut(s) 1132, 1169, 1366, 1403, 1729, 1829
Hpy166II GTNNAC 5 cut(s) 384, 1087, 1160, 1362, 1651
Hpy188I TCNGA 8 cut(s) 163, 295, 313, 901, 932, 1341, 1828, 1972
Hpy188III TCNNGA 4 cut(s) 113, 359, 1133, 2020
Hpy8I GTNNAC 5 cut(s) 384, 1087, 1160, 1362, 1651
Hpy99I CGWCG 6 cut(s) 193, 317, 413, 1193, 1214, 1432
HpyCH4III ACNGT 7 cut(s) 145, 349, 403, 481, 668, 744, 775
HpyCH4IV ACGT 3 cut(s) 1188, 1212, 1358
HpyCH4V TGCA 5 cut(s) 16, 547, 598, 1195, 1877
HpyF3I CTNAG 7 cut(s) 238, 458, 488, 497, 1496, 1776, 1791
HpySE526I ACGT 3 cut(s) 1188, 1212, 1358
Hsp92I GRCGYC 2 cut(s) 1068, 1662
Hsp92II CATG 8 cut(s) 20, 454, 820, 1207, 1540, 1733, 1896, 2023
HspAI GCGC 3 cut(s) 542, 980, 1832
KflI GGGWCCC 1 cut(s) 2136
KpnI GGTACC 2 cut(s) 144, 1250
KspI CCGCGG 1 cut(s) 1935
LguI GCTCTTC 1 cut(s) 1968
LmnI GCTCC 6 cut(s) 564, 912, 972, 1180, 1284, 1807
Lsp1109I GCAGC 8 cut(s) 531, 594, 1207, 1479, 1501, 1807, 1981, 1984
LweI GCATC 4 cut(s) 603, 1018, 1345, 1620
MaeI CTAG 6 cut(s) 87, 789, 806, 953, 959, 1091
MaeII ACGT 3 cut(s) 1188, 1212, 1358
MaeIII GTNAC 6 cut(s) 343, 775, 808, 1180, 1354, 1544
MbiI CCGCTC 1 cut(s) 2158
MfeI CAATTG 2 cut(s) 1034, 1116
MflI RGATCY 4 cut(s) 272, 323, 484, 1319
MhlI GDGCHC 4 cut(s) 917, 1263, 1639, 1980
MlsI TGGCCA 1 cut(s) 353
MluCI AATT 9 cut(s) 20, 50, 70, 254, 719, 1034, 1116, 2024, 2066
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 4 cut(s) 317, 1433, 1853, 1889
MmeI TCCRAC 3 cut(s) 336, 955, 1728
Mox20I TGGCCA 1 cut(s) 353
MroXI GAANNNNTTC 1 cut(s) 1128
MscI TGGCCA 1 cut(s) 353
MslI CAYNNNNRTG 3 cut(s) 449, 1080, 1985
Msp20I TGGCCA 1 cut(s) 353
MspA1I CMGCKG 3 cut(s) 1492, 1798, 1934
MunI CAATTG 2 cut(s) 1034, 1116
Mva1269I GAATGC 1 cut(s) 652
MvaI CCWGG 7 cut(s) 169, 1058, 1305, 1416, 1598, 1916, 2084
MvnI CGCG 4 cut(s) 518, 1805, 1834, 1934
NcoI CCATGG 1 cut(s) 1203
NlaIII CATG 8 cut(s) 20, 454, 820, 1207, 1540, 1733, 1896, 2023
NmeAIII GCCGAG 2 cut(s) 269, 402
NmuCI GTSAC 4 cut(s) 343, 1180, 1354, 1544
NspI RCATGY 2 cut(s) 454, 820
PagI TCATGA 1 cut(s) 2019
PaqCI CACCTGC 1 cut(s) 1705
PceI AGGCCT 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 1968
PcsI WCGNNNNNNNCGW 3 cut(s) 188, 275, 1512
PctI GAATGC 1 cut(s) 652
PdmI GAANNNNTTC 1 cut(s) 1128
PfeI GAWTC 6 cut(s) 158, 520, 553, 924, 1603, 1622
PflFI GACNNNGTC 1 cut(s) 1169
PflMI CCANNNNNTGG 1 cut(s) 1039
PfoI TCCNGGA 1 cut(s) 2082
PinAI ACCGGT 2 cut(s) 231, 2147
PleI GAGTC 4 cut(s) 316, 1432, 1853, 1888
PpsI GAGTC 4 cut(s) 316, 1432, 1853, 1888
PpuMI RGGWCCY 2 cut(s) 133, 2136
PshAI GACNNNNGTC 2 cut(s) 1187, 1423
Psp124BI GAGCTC 2 cut(s) 917, 1980
Psp5II RGGWCCY 2 cut(s) 133, 2136
Psp6I CCWGG 7 cut(s) 167, 1056, 1303, 1414, 1596, 1914, 2082
PspGI CCWGG 7 cut(s) 167, 1056, 1303, 1414, 1596, 1914, 2082
PspPI GGNCC 9 cut(s) 133, 334, 399, 1054, 1252, 1418, 1533, 1578, 2136
PspPPI RGGWCCY 2 cut(s) 133, 2136
PstI CTGCAG 2 cut(s) 600, 1879
PstNI CAGNNNCTG 3 cut(s) 604, 1495, 1883
PsuI RGATCY 4 cut(s) 272, 323, 484, 1319
PsyI GACNNNGTC 1 cut(s) 1169
PvuII CAGCTG 2 cut(s) 1492, 1798
RseI CAYNNNNRTG 3 cut(s) 449, 1080, 1985
SacI GAGCTC 2 cut(s) 917, 1980
SacII CCGCGG 1 cut(s) 1935
SalI GTCGAC 1 cut(s) 1085
SapI GCTCTTC 1 cut(s) 1968
Sau96I GGNCC 9 cut(s) 133, 334, 399, 1054, 1252, 1418, 1533, 1578, 2136
SchI GAGTC 4 cut(s) 317, 1433, 1853, 1889
SduI GDGCHC 4 cut(s) 917, 1263, 1639, 1980
SfaNI GCATC 4 cut(s) 603, 1018, 1345, 1620
SfcI CTRYAG 2 cut(s) 596, 1875
Sfr303I CCGCGG 1 cut(s) 1935
SgrBI CCGCGG 1 cut(s) 1935
SinI GGWCC 5 cut(s) 133, 399, 1418, 1533, 2136
SmaI CCCGGG 6 cut(s) 418, 531, 630, 881, 1619, 1856
SmiMI CAYNNNNRTG 3 cut(s) 449, 1080, 1985
SmlI CTYRAG 3 cut(s) 748, 1133, 1811
SmoI CTYRAG 3 cut(s) 748, 1133, 1811
SpeI ACTAGT 1 cut(s) 805
Sse9I AATT 9 cut(s) 20, 50, 70, 254, 719, 1034, 1116, 2024, 2066
SseBI AGGCCT 1 cut(s) 493
SspMI CTAG 6 cut(s) 87, 789, 806, 953, 959, 1091
SstI GAGCTC 2 cut(s) 917, 1980
StuI AGGCCT 1 cut(s) 493
StyI CCWWGG 4 cut(s) 565, 1090, 1203, 1581
TaaI ACNGT 7 cut(s) 145, 349, 403, 481, 668, 744, 775
TaiI ACGT 3 cut(s) 1191, 1215, 1361
TaqI TCGA 8 cut(s) 228, 278, 447, 827, 1080, 1086, 1097, 1566
TaqII GACCGA 1 cut(s) 1101
TasI AATT 9 cut(s) 20, 50, 70, 254, 719, 1034, 1116, 2024, 2066
TatI WGTACW 3 cut(s) 730, 744, 1959
TauI GCSGC 6 cut(s) 788, 1787, 1790, 2045, 2114, 2117
TfiI GAWTC 6 cut(s) 158, 520, 553, 924, 1603, 1622
TscAI CASTG 3 cut(s) 354, 1285, 1369
TseFI GTSAC 4 cut(s) 343, 1180, 1354, 1544
TseI GCWGC 8 cut(s) 544, 607, 1195, 1489, 1492, 1795, 1994, 1997
Tsp45I GTSAC 4 cut(s) 343, 1180, 1354, 1544
TspDTI ATGAA 9 cut(s) 33, 449, 916, 1064, 1305, 1533, 1718, 2036, 2073
TspGWI ACGGA 2 cut(s) 713, 1774
TspMI CCCGGG 6 cut(s) 416, 529, 628, 879, 1617, 1854
TspRI CASTG 3 cut(s) 354, 1285, 1369
Tth111I GACNNNGTC 1 cut(s) 1169
Van91I CCANNNNNTGG 1 cut(s) 1039
VpaK11BI GGWCC 5 cut(s) 133, 399, 1418, 1533, 2136
XapI RAATTY 6 cut(s) 20, 50, 70, 719, 2024, 2066
XceI RCATGY 2 cut(s) 454, 820
XcmI CCANNNNNNNNNTGG 1 cut(s) 2147
XmaI CCCGGG 6 cut(s) 416, 529, 628, 879, 1617, 1854
XmaJI CCTAGG 1 cut(s) 1090
XmiI GTMKAC 2 cut(s) 383, 1086
XmnI GAANNNNTTC 1 cut(s) 1128
XspI CTAG 6 cut(s) 87, 789, 806, 953, 959, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.