Rmu_sc0007920.1_g000017

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007920.1
OG0000087
Physical Location & Seq
Forward (+)
39611 .. 42926
3316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007920.1_g000017.1.cds

Sequence Viewer

Length: 1605 bp
atgcgtgaaaaagaagctcagaagacttggaagatttgcagcgaggagaaagggagagccaagggagaagtgtgcgtgcctttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccactctagctgaagtggatatcgaccggtacctaggccgagtagatcaattagcagagaacacgggatcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtggatctgcggaggccccggtagtcacagtggccattaccgagggcataccgaagccgaggtatacacttgcggatgggaccgcctctcagggatggagagatggccgcgaatcctaccccggggtgggtggcgctgcacgagaatcagctccaccaagggtcatcgctaccgctgccccggtgcctacaatatttgctgcggatgctgaacctgtccccggggcagctgaccccgaatgccattcgccaaatatacagtatgatggctatgtgggctttgtgccaataagggtggccttccataaacgaattccgcgcgaaacccttctggagatcaccgatgagggatatggtgaacctgaccccgacgctccagtgacccacgtcgtgcagccctccatggccgacgttatcacgatagatgacaccgggacgggaaaggtaccggcccccgtgcccatttcctctcgttccactgggagcgatgaggcattgcttcctggtgagaagaagagatcccataggcaccggcatcgaagtgataaggaggtgacgtacactggccgagatgttcaaggttttggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttcgcttggcttgttatctcccgccagtccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgaagaaaagttcgtgcggtccatgcttggtgacctgaaggatattgacctcgaccgggttcgggccaaggataatacgccccaagaggatcgccgtcttgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggaaagaaggccaagctggagaatgagcgggactcattgaaggctgagatggccgccgctaagcagcggatctcggagcttgagggtgaagtctctgaggcgcgggaagaggtaaaaaatgcccgggactccgagaaaaaagctgcagagtctgccatgtcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatcgttatgctggctgctgcccaagataaggctgttatcatgaaattcaaggagtgggtggcaaccgaatatttagatgaagctaaattcaggcggggtctcctggagaaaaaaaagaaagatcgggaggcggcggccaagtctggtgccggtgggtcccagagtaccggtggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

534

Amino Acids

58.54

Weight (kDa)

5.64

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1144
Acc36I ACCTGC 1 cut(s) 1144
Acc65I GGTACC 2 cut(s) 156, 685
AccB1I GGYRCC 5 cut(s) 156, 424, 685, 768, 1565
AccB7I CCANNNNNTGG 1 cut(s) 1332
AccBSI CCGCTC 2 cut(s) 1198, 1597
AccI GTMKAC 1 cut(s) 305
AccII CGCG 5 cut(s) 351, 559, 561, 1273, 1373
AclWI GGATC 8 cut(s) 126, 189, 202, 253, 753, 1050, 1247, 1368
AcoI YGGCCR 6 cut(s) 273, 346, 645, 805, 1221, 1554
AcsI RAATTY 3 cut(s) 552, 1463, 1505
AcuI CTGAAG 3 cut(s) 159, 1010, 1145
AcyI GRCGYC 1 cut(s) 1101
AdeI CACNNNGTG 1 cut(s) 631
AfaI GTAC 8 cut(s) 127, 158, 687, 800, 944, 1091, 1400, 1585
AgeI ACCGGT 2 cut(s) 153, 1586
AgsI TTSAA 4 cut(s) 818, 1084, 1210, 1468
AjiI CACGTC 1 cut(s) 628
AjnI CCWGG 4 cut(s) 100, 742, 1353, 1521
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw21I GWGCWC 1 cut(s) 1419
Alw26I GTCTC 2 cut(s) 1267, 1523
AlwI GGATC 8 cut(s) 126, 189, 202, 253, 753, 1050, 1247, 1368
AlwNI CAGNNNCTG 2 cut(s) 934, 1322
Ama87I CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
ApoI RAATTY 3 cut(s) 552, 1463, 1505
AsiGI ACCGGT 2 cut(s) 153, 1586
Asp700I GAANNNNTTC 1 cut(s) 567
Asp718I GGTACC 2 cut(s) 156, 685
AspA2I CCTAGG 1 cut(s) 160
AspLEI GCGC 3 cut(s) 377, 561, 1273
AspS9I GGNCC 7 cut(s) 256, 321, 691, 857, 972, 1017, 1575
AsuHPI GGTGA 8 cut(s) 571, 608, 758, 805, 842, 995, 1168, 1268
AvaI CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
AvaII GGWCC 4 cut(s) 321, 857, 972, 1575
AvrII CCTAGG 1 cut(s) 160
BaeGI GKGCMC 2 cut(s) 702, 1078
BalI TGGCCA 1 cut(s) 275
BamHI GGATCC 1 cut(s) 194
BanI GGYRCC 5 cut(s) 156, 424, 685, 768, 1565
BanII GRGCYC 1 cut(s) 1419
BauI CACGAG 2 cut(s) 381, 1382
BbsI GAAGAC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 1419
BccI CCATC 7 cut(s) 81, 311, 330, 338, 500, 929, 1213
BceAI ACGGC 2 cut(s) 1032, 1373
BcgI CGANNNNNNTGC 2 cut(s) 758, 792
BciT130I CCWGG 4 cut(s) 102, 744, 1355, 1523
BciVI GTATCC 1 cut(s) 105
BcoDI GTCTC 2 cut(s) 1267, 1523
BfaI CTAG 2 cut(s) 134, 161
BfmI CTRYAG 1 cut(s) 1314
BfoI RGCGCY 1 cut(s) 378
BfuAI ACCTGC 1 cut(s) 1144
BfuI GTATCC 1 cut(s) 105
BlnI CCTAGG 1 cut(s) 160
BlpI GCTNAGC 1 cut(s) 1230
Bme18I GGWCC 4 cut(s) 321, 857, 972, 1575
BmeT110I CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
BmgBI CACGTC 1 cut(s) 628
BmgT120I GGNCC 7 cut(s) 256, 321, 691, 857, 972, 1017, 1575
BmrI ACTGGG 2 cut(s) 213, 729
BmsI GCATC 3 cut(s) 436, 784, 1059
BmuI ACTGGG 2 cut(s) 213, 729
BoxI GACNNNNGTC 2 cut(s) 626, 862
BpiI GAAGAC 1 cut(s) 29
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
BpmI CTGGAG 5 cut(s) 593, 600, 1208, 1376, 1544
Bpu1102I GCTNAGC 1 cut(s) 1230
BpuEI CTTGAG 1 cut(s) 1271
BsaBI GATNNNNATC 1 cut(s) 1119
BsaHI GRCGYC 1 cut(s) 1101
BsaI GGTCTC 1 cut(s) 1523
BsaWI WCCGGW 3 cut(s) 153, 901, 1586
BsaXI ACNNNNNCTCC 4 cut(s) 782, 812, 1388, 1418
Bse118I RCCGGY 5 cut(s) 153, 688, 771, 1568, 1586
Bse1I ACTGG 5 cut(s) 208, 617, 724, 808, 897
Bse3DI GCAATG 1 cut(s) 734
Bse8I GATNNNNATC 1 cut(s) 1119
BseBI CCWGG 4 cut(s) 102, 744, 1355, 1523
BseGI GGATG 4 cut(s) 92, 322, 341, 451
BseJI GATNNNNATC 1 cut(s) 1119
BseMI GCAATG 1 cut(s) 734
BseMII CTCAG 5 cut(s) 32, 344, 926, 1206, 1257
BseNI ACTGG 5 cut(s) 208, 617, 724, 808, 897
BseRI GAGGAG 4 cut(s) 59, 242, 1145, 1409
BseSI GKGCMC 2 cut(s) 702, 1078
BsgI GTGCAG 2 cut(s) 363, 653
Bsh1236I CGCG 5 cut(s) 351, 559, 561, 1273, 1373
Bsh1285I CGRYCG 2 cut(s) 154, 1009
BshNI GGYRCC 5 cut(s) 156, 424, 685, 768, 1565
BshTI ACCGGT 2 cut(s) 153, 1586
BsiEI CGRYCG 2 cut(s) 154, 1009
BsiHKAI GWGCWC 1 cut(s) 1419
BsiHKCI CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
BslFI GGGAC 7 cut(s) 334, 443, 688, 870, 1214, 1310, 1561
BsmAI GTCTC 2 cut(s) 1267, 1523
BsmFI GGGAC 7 cut(s) 334, 443, 688, 870, 1214, 1310, 1561
BsmI GAATGC 1 cut(s) 485
Bso31I GGTCTC 1 cut(s) 1523
BsoBI CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
Bsp1286I GDGCHC 3 cut(s) 702, 1078, 1419
Bsp1720I GCTNAGC 1 cut(s) 1230
Bsp19I CCATGG 1 cut(s) 642
BspCNI CTCAG 5 cut(s) 31, 343, 927, 1207, 1258
BspFNI CGCG 5 cut(s) 351, 559, 561, 1273, 1373
BspHI TCATGA 1 cut(s) 1458
BspMAI CTGCAG 1 cut(s) 1318
BspMI ACCTGC 1 cut(s) 1144
BspPI GGATC 8 cut(s) 126, 189, 202, 253, 753, 1050, 1247, 1368
BspQI GCTCTTC 1 cut(s) 1407
BspT107I GGYRCC 5 cut(s) 156, 424, 685, 768, 1565
BspTNI GGTCTC 1 cut(s) 1523
BsrBI CCGCTC 2 cut(s) 1198, 1597
BsrDI GCAATG 1 cut(s) 734
BsrFI RCCGGY 5 cut(s) 153, 688, 771, 1568, 1586
BsrI ACTGG 5 cut(s) 208, 617, 724, 808, 897
BssAI RCCGGY 5 cut(s) 153, 688, 771, 1568, 1586
BssNAI GTATAC 1 cut(s) 306
BssNI GRCGYC 1 cut(s) 1101
BssSI CACGAG 2 cut(s) 381, 1382
BssT1I CCWWGG 5 cut(s) 60, 160, 398, 642, 1020
Bst1107I GTATAC 1 cut(s) 306
Bst2BI CACGAG 2 cut(s) 381, 1382
Bst2UI CCWGG 4 cut(s) 102, 744, 1355, 1523
Bst4CI ACNGT 2 cut(s) 271, 501
Bst6I CTCTTC 5 cut(s) 749, 827, 1085, 1272, 1407
BstACI GRCGYC 1 cut(s) 1101
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstC8I GCNNGC 5 cut(s) 77, 1074, 1105, 1431, 1595
BstDEI CTNAG 6 cut(s) 18, 330, 935, 1215, 1230, 1266
BstDSI CCRYGG 3 cut(s) 642, 1371, 1389
BstEII GGTNACC 1 cut(s) 983
BstF5I GGATG 4 cut(s) 92, 322, 341, 451
BstFNI CGCG 5 cut(s) 351, 559, 561, 1273, 1373
BstH2I RGCGCY 1 cut(s) 378
BstHHI GCGC 3 cut(s) 377, 561, 1273
BstMAI GTCTC 2 cut(s) 1267, 1523
BstMCI CGRYCG 2 cut(s) 154, 1009
BstMWI GCNNNNNNNGC 8 cut(s) 416, 446, 516, 925, 976, 1100, 1220, 1322
BstNI CCWGG 4 cut(s) 102, 744, 1355, 1523
BstPAI GACNNNNGTC 2 cut(s) 626, 862
BstPI GGTNACC 1 cut(s) 983
BstSFI CTRYAG 1 cut(s) 1314
BstSLI GKGCMC 2 cut(s) 702, 1078
BstUI CGCG 5 cut(s) 351, 559, 561, 1273, 1373
BstV2I GAAGAC 1 cut(s) 29
BstX2I RGATCY 4 cut(s) 194, 245, 758, 1239
BstYI RGATCY 4 cut(s) 194, 245, 758, 1239
BstZ17I GTATAC 1 cut(s) 306
BsuI GTATCC 1 cut(s) 105
BtgI CCRYGG 3 cut(s) 642, 1371, 1389
BtgZI GCGATG 2 cut(s) 391, 741
BtrI CACGTC 1 cut(s) 628
BtsCI GGATG 4 cut(s) 92, 322, 341, 451
BtsIMutI CAGTG 4 cut(s) 276, 624, 717, 801
BveI ACCTGC 1 cut(s) 1144
Cac8I GCNNGC 5 cut(s) 77, 1074, 1105, 1431, 1595
CaiI CAGNNNCTG 2 cut(s) 934, 1322
CciI TCATGA 1 cut(s) 1458
CfoI GCGC 3 cut(s) 377, 561, 1273
Cfr10I RCCGGY 5 cut(s) 153, 688, 771, 1568, 1586
Cfr13I GGNCC 7 cut(s) 256, 321, 691, 857, 972, 1017, 1575
Cfr42I CCGCGG 1 cut(s) 1374
Cfr9I CCCGGG 5 cut(s) 362, 461, 853, 1056, 1293
CseI GACGC 2 cut(s) 620, 1109
Csp6I GTAC 8 cut(s) 126, 157, 686, 799, 943, 1090, 1399, 1584
CspAI ACCGGT 2 cut(s) 153, 1586
CspCI CAANNNNNGTGG 2 cut(s) 516, 551
CviAII CATG 6 cut(s) 643, 976, 1169, 1327, 1332, 1459
CviQI GTAC 8 cut(s) 126, 157, 686, 799, 943, 1090, 1399, 1584
DdeI CTNAG 6 cut(s) 18, 330, 935, 1215, 1230, 1266
DraIII CACNNNGTG 1 cut(s) 631
EaeI YGGCCR 6 cut(s) 273, 346, 645, 805, 1221, 1554
Eam1104I CTCTTC 5 cut(s) 749, 827, 1085, 1272, 1407
EarI CTCTTC 5 cut(s) 749, 827, 1085, 1272, 1407
Ecl136II GAGCTC 1 cut(s) 1417
Eco130I CCWWGG 5 cut(s) 60, 160, 398, 642, 1020
Eco24I GRGCYC 1 cut(s) 1419
Eco31I GGTCTC 1 cut(s) 1523
Eco32I GATATC 1 cut(s) 148
Eco47I GGWCC 4 cut(s) 321, 857, 972, 1575
Eco53kI GAGCTC 1 cut(s) 1417
Eco57I CTGAAG 3 cut(s) 159, 1010, 1145
Eco88I CYCGRG 5 cut(s) 362, 461, 853, 1056, 1293
Eco91I GGTNACC 1 cut(s) 983
EcoICRI GAGCTC 1 cut(s) 1417
EcoO109I RGGNCCY 2 cut(s) 256, 1575
EcoO65I GGTNACC 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 552
EcoRII CCWGG 4 cut(s) 100, 742, 1353, 1521
EcoRV GATATC 1 cut(s) 148
EcoT14I CCWWGG 5 cut(s) 60, 160, 398, 642, 1020
EcoT38I GRGCYC 1 cut(s) 1419
ErhI CCWWGG 5 cut(s) 60, 160, 398, 642, 1020
FaeI CATG 6 cut(s) 646, 979, 1172, 1330, 1335, 1462
FaqI GGGAC 7 cut(s) 334, 443, 688, 870, 1214, 1310, 1561
FatI CATG 6 cut(s) 642, 975, 1168, 1326, 1331, 1458
FauI CCCGC 6 cut(s) 901, 1065, 1191, 1266, 1378, 1506
FblI GTMKAC 1 cut(s) 305
FokI GGATG 4 cut(s) 99, 329, 348, 458
FriOI GRGCYC 1 cut(s) 1419
FspBI CTAG 2 cut(s) 134, 161
GlaI GCGC 3 cut(s) 376, 560, 1272
GsuI CTGGAG 5 cut(s) 593, 600, 1208, 1376, 1544
HaeII RGCGCY 1 cut(s) 378
HgaI GACGC 2 cut(s) 620, 1109
HhaI GCGC 3 cut(s) 377, 561, 1273
Hin1I GRCGYC 1 cut(s) 1101
Hin1II CATG 6 cut(s) 646, 979, 1172, 1330, 1335, 1462
Hin6I GCGC 3 cut(s) 375, 559, 1271
HinP1I GCGC 3 cut(s) 375, 559, 1271
HinfI GANTC 9 cut(s) 91, 230, 353, 386, 863, 1061, 1202, 1298, 1319
HphI GGTGA 8 cut(s) 571, 608, 758, 805, 842, 995, 1168, 1268
Hpy166II GTNNAC 4 cut(s) 306, 599, 801, 1090
Hpy188I TCNGA 9 cut(s) 21, 96, 217, 235, 1125, 1246, 1267, 1303, 1411
Hpy188III TCNNGA 4 cut(s) 572, 658, 1459, 1544
Hpy8I GTNNAC 4 cut(s) 306, 599, 801, 1090
Hpy99I CGWCG 6 cut(s) 126, 239, 614, 632, 653, 871
HpyCH4III ACNGT 2 cut(s) 271, 501
HpyCH4IV ACGT 3 cut(s) 627, 651, 797
HpyCH4V TGCA 4 cut(s) 39, 380, 634, 1316
HpyF10VI GCNNNNNNNGC 8 cut(s) 416, 446, 516, 925, 976, 1100, 1220, 1322
HpyF3I CTNAG 6 cut(s) 18, 330, 935, 1215, 1230, 1266
HpySE526I ACGT 3 cut(s) 627, 651, 797
Hsp92I GRCGYC 1 cut(s) 1101
Hsp92II CATG 6 cut(s) 646, 979, 1172, 1330, 1335, 1462
HspAI GCGC 3 cut(s) 375, 559, 1271
KflI GGGWCCC 1 cut(s) 1575
KpnI GGTACC 2 cut(s) 160, 689
KspI CCGCGG 1 cut(s) 1374
LguI GCTCTTC 1 cut(s) 1407
LmnI GCTCC 4 cut(s) 397, 619, 723, 1246
LweI GCATC 3 cut(s) 436, 784, 1059
MaeI CTAG 2 cut(s) 134, 161
MaeII ACGT 3 cut(s) 627, 651, 797
MaeIII GTNAC 4 cut(s) 265, 619, 793, 983
MbiI CCGCTC 2 cut(s) 1198, 1597
MflI RGATCY 4 cut(s) 194, 245, 758, 1239
MhlI GDGCHC 3 cut(s) 702, 1078, 1419
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 4 cut(s) 176, 552, 1463, 1505
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 5 cut(s) 239, 872, 1196, 1292, 1328
MmeI TCCRAC 1 cut(s) 258
Mox20I TGGCCA 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 567
MscI TGGCCA 1 cut(s) 275
MslI CAYNNNNRTG 2 cut(s) 780, 1424
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 5 cut(s) 416, 470, 931, 1237, 1373
Mva1269I GAATGC 1 cut(s) 485
MvaI CCWGG 4 cut(s) 102, 744, 1355, 1523
MvnI CGCG 5 cut(s) 351, 559, 561, 1273, 1373
MwoI GCNNNNNNNGC 8 cut(s) 416, 446, 516, 925, 976, 1100, 1220, 1322
NcoI CCATGG 1 cut(s) 642
NlaIII CATG 6 cut(s) 646, 979, 1172, 1330, 1335, 1462
NmeAIII GCCGAG 3 cut(s) 191, 324, 833
NmuCI GTSAC 4 cut(s) 265, 619, 793, 983
PagI TCATGA 1 cut(s) 1458
PaqCI CACCTGC 1 cut(s) 1144
PciSI GCTCTTC 1 cut(s) 1407
PcsI WCGNNNNNNNCGW 3 cut(s) 121, 197, 951
PctI GAATGC 1 cut(s) 485
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 4 cut(s) 91, 353, 386, 1061
PflMI CCANNNNNTGG 1 cut(s) 1332
PfoI TCCNGGA 1 cut(s) 1521
PinAI ACCGGT 2 cut(s) 153, 1586
PleI GAGTC 5 cut(s) 238, 871, 1196, 1292, 1327
PpsI GAGTC 5 cut(s) 238, 871, 1196, 1292, 1327
PpuMI RGGWCCY 1 cut(s) 1575
PshAI GACNNNNGTC 2 cut(s) 626, 862
Psp124BI GAGCTC 1 cut(s) 1419
Psp5II RGGWCCY 1 cut(s) 1575
Psp6I CCWGG 4 cut(s) 100, 742, 1353, 1521
PspEI GGTNACC 1 cut(s) 983
PspGI CCWGG 4 cut(s) 100, 742, 1353, 1521
PspPI GGNCC 7 cut(s) 256, 321, 691, 857, 972, 1017, 1575
PspPPI RGGWCCY 1 cut(s) 1575
PstI CTGCAG 1 cut(s) 1318
PstNI CAGNNNCTG 2 cut(s) 934, 1322
PsuI RGATCY 4 cut(s) 194, 245, 758, 1239
PvuII CAGCTG 2 cut(s) 470, 931
RsaI GTAC 8 cut(s) 127, 158, 687, 800, 944, 1091, 1400, 1585
RsaNI GTAC 8 cut(s) 126, 157, 686, 799, 943, 1090, 1399, 1584
RseI CAYNNNNRTG 2 cut(s) 780, 1424
SacI GAGCTC 1 cut(s) 1419
SacII CCGCGG 1 cut(s) 1374
SapI GCTCTTC 1 cut(s) 1407
Sau96I GGNCC 7 cut(s) 256, 321, 691, 857, 972, 1017, 1575
SchI GAGTC 5 cut(s) 239, 872, 1196, 1292, 1328
SduI GDGCHC 3 cut(s) 702, 1078, 1419
SfaNI GCATC 3 cut(s) 436, 784, 1059
SfcI CTRYAG 1 cut(s) 1314
Sfr303I CCGCGG 1 cut(s) 1374
SgrBI CCGCGG 1 cut(s) 1374
SinI GGWCC 4 cut(s) 321, 857, 972, 1575
SmaI CCCGGG 5 cut(s) 364, 463, 855, 1058, 1295
SmiMI CAYNNNNRTG 2 cut(s) 780, 1424
SmlI CTYRAG 1 cut(s) 1250
SmoI CTYRAG 1 cut(s) 1250
Sse9I AATT 4 cut(s) 176, 552, 1463, 1505
SspI AATATT 2 cut(s) 435, 1490
SspMI CTAG 2 cut(s) 134, 161
SstI GAGCTC 1 cut(s) 1419
StyI CCWWGG 5 cut(s) 60, 160, 398, 642, 1020
TaaI ACNGT 2 cut(s) 271, 501
TaiI ACGT 3 cut(s) 630, 654, 800
TaqI TCGA 4 cut(s) 150, 200, 778, 1005
TasI AATT 4 cut(s) 176, 552, 1463, 1505
TatI WGTACW 1 cut(s) 1398
TauI GCSGC 5 cut(s) 351, 1226, 1229, 1553, 1556
TfiI GAWTC 4 cut(s) 91, 353, 386, 1061
TscAI CASTG 4 cut(s) 276, 624, 724, 808
TseFI GTSAC 4 cut(s) 265, 619, 793, 983
Tsp45I GTSAC 4 cut(s) 265, 619, 793, 983
TspDTI ATGAA 3 cut(s) 1157, 1475, 1512
TspMI CCCGGG 5 cut(s) 362, 461, 853, 1056, 1293
TspRI CASTG 4 cut(s) 276, 624, 724, 808
Van91I CCANNNNNTGG 1 cut(s) 1332
VpaK11BI GGWCC 4 cut(s) 321, 857, 972, 1575
XapI RAATTY 3 cut(s) 552, 1463, 1505
XcmI CCANNNNNNNNNTGG 1 cut(s) 1586
XmaI CCCGGG 5 cut(s) 362, 461, 853, 1056, 1293
XmaJI CCTAGG 1 cut(s) 160
XmiI GTMKAC 1 cut(s) 305
XmnI GAANNNNTTC 1 cut(s) 567
XspI CTAG 2 cut(s) 134, 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.