Rmu_sc0005664.1_g000033

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005664.1
OG0000087
Physical Location & Seq
Forward (+)
116859 .. 120727
3869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005664.1_g000033.1.cds

Sequence Viewer

Length: 1266 bp
atgaatgacaacaagctgatggatatgcttatgagccaaggagaggatgctcttcacattgacgtcgacctgccgtcaaaggctacgggtcgctcgattgaagaataccttcttgagatatctgacgaagggtacgggaaccctgatcctgaagcccatgttatccaggagaatcctacggctggggatgtaattgccattgccgagcctggaagagggaaggccccggtgtctggctccctctcatcccactccacagggtcaaccggtaaggaggaggccctgctcccaggaacgagacctaagaggcagaagaaaagtcattctggactggagccgtcactgtcccatgggctgttatccccggctataccactagtccctaagaagcccatcaagcagctgctggacgagtacggggtttgtgatgagaagttcttgcgctctatgctttcccatttgaaggacatagacctcgatcggagcaattctaataaaaatggtaaacaaggaaaacctaattcaaaggaaaccgcggaagccatgctgttactatgcctcaactccatgtacgcccaacctcaactaatttcgcctgtaaactgggcatttgaaacagaagggcccaggggaaaagtattggaaaacacgttagttaaccagtgccacaaaggcggacgggcttcggtgatcccatcacctcgccacaaaaggcggaagatcaatgctagcaatgataatagtcacccaaaagaggagcgggactccttgaagaggaagttagagtccttaactccgaaggtgactgagctggaggcatcgaagaaaaagatctcggagctagaaagagaacttaccagggtaaagactgagatagggagtgcccgggactccatgaaagaggctgaagaatctgctgagtcatggaaggcaagagcgaaggagctagaagagcgccttcccctagaaaagcaaaaggctgttgctgatttccggggctcccaagatgttgtggacatgatgctcgctgcccaagacaaggcagtaattacgaagtacaaggagtgggtagcagccgggtacttagatgaagccaaattcaggcgaggactgcttgagaaaaagaagaaggaacatgaggcaaaagagagggaacatgctagacccgagggaggtgcgactggtagccgagctggtgctcaagatttggaggtttgccctccggggcctttttttgtttacccattttttgaacagtggccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

421

Amino Acids

46.73

Weight (kDa)

6.86

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
Acc36I ACCTGC 1 cut(s) 78
AccBSI CCGCTC 1 cut(s) 760
AccI GTMKAC 1 cut(s) 66
AccII CGCG 1 cut(s) 536
AciI CCGC 5 cut(s) 534, 536, 675, 715, 760
AclWI GGATC 2 cut(s) 140, 685
AcsI RAATTY 1 cut(s) 1097
AcuI CTGAAG 2 cut(s) 171, 927
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 5 cut(s) 134, 416, 572, 1058, 1082
AflIII ACRYGT 1 cut(s) 648
AgeI ACCGGT 1 cut(s) 266
AgsI TTSAA 6 cut(s) 101, 463, 525, 614, 772, 1253
AhdI GACNNNNNGTC 1 cut(s) 73
AhlI ACTAGT 1 cut(s) 376
AjnI CCWGG 5 cut(s) 165, 208, 289, 626, 857
AluBI AGCT 6 cut(s) 16, 403, 811, 841, 946, 1193
AluI AGCT 6 cut(s) 16, 403, 811, 841, 946, 1193
Alw21I GWGCWC 1 cut(s) 1201
Alw26I GTCTC 1 cut(s) 292
AlwI GGATC 2 cut(s) 140, 685
AlwNI CAGNNNCTG 1 cut(s) 406
Ama87I CYCGRG 2 cut(s) 885, 1166
AoxI GGCC 5 cut(s) 222, 279, 623, 1226, 1259
ApaI GGGCCC 1 cut(s) 627
ApeKI GCWGC 4 cut(s) 400, 403, 1028, 1073
ApoI RAATTY 1 cut(s) 1097
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 1 cut(s) 108
AspLEI GCGC 2 cut(s) 444, 957
AspS9I GGNCC 5 cut(s) 223, 280, 623, 624, 1226
AsuC2I CCSGG 7 cut(s) 227, 365, 886, 887, 995, 1078, 1224
AsuHPI GGTGA 4 cut(s) 690, 700, 737, 814
AsuNHI GCTAGC 1 cut(s) 728
AvaI CYCGRG 2 cut(s) 885, 1166
BaeGI GKGCMC 2 cut(s) 627, 886
BanII GRGCYC 2 cut(s) 627, 1001
Bbv12I GWGCWC 1 cut(s) 1201
BbvI GCAGC 4 cut(s) 390, 412, 1015, 1085
BccI CCATC 3 cut(s) 13, 401, 703
BceAI ACGGC 3 cut(s) 58, 195, 322
BcgI CGANNNNNNTGC 2 cut(s) 1157, 1191
BciT130I CCWGG 5 cut(s) 167, 210, 291, 628, 859
BcnI CCSGG 7 cut(s) 227, 365, 886, 887, 995, 1078, 1224
BcoDI GTCTC 1 cut(s) 292
BcuI ACTAGT 1 cut(s) 376
BfaI CTAG 6 cut(s) 377, 729, 842, 947, 965, 1161
BfoI RGCGCY 1 cut(s) 958
BfuAI ACCTGC 1 cut(s) 78
BglI GCCNNNNNGGC 1 cut(s) 672
BglII AGATCT 1 cut(s) 831
BisI GCNGC 4 cut(s) 401, 404, 1029, 1074
BlsI GCNGC 4 cut(s) 402, 405, 1030, 1075
BmeRI GACNNNNNGTC 1 cut(s) 73
BmeT110I CYCGRG 2 cut(s) 885, 1166
BmgT120I GGNCC 5 cut(s) 223, 280, 623, 624, 1226
BmiI GGNNCC 7 cut(s) 140, 225, 238, 336, 625, 1000, 1227
BmrI ACTGGG 1 cut(s) 613
BmsI GCATC 3 cut(s) 37, 827, 1011
BmtI GCTAGC 1 cut(s) 732
BmuI ACTGGG 1 cut(s) 613
BplI GAGNNNNNCTC 2 cut(s) 749, 781
BpmI CTGGAG 2 cut(s) 353, 833
BpuEI CTTGAG 3 cut(s) 134, 1136, 1185
BpuMI CCSGG 7 cut(s) 227, 365, 886, 887, 995, 1078, 1224
BsaHI GRCGYC 1 cut(s) 63
BsaI GGTCTC 1 cut(s) 292
BsaWI WCCGGW 1 cut(s) 266
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 4 cut(s) 336, 608, 661, 1186
Bse3DI GCAATG 2 cut(s) 198, 739
BseBI CCWGG 5 cut(s) 167, 210, 291, 628, 859
BseGI GGATG 3 cut(s) 52, 193, 245
BseMI GCAATG 2 cut(s) 198, 739
BseMII CTCAG 3 cut(s) 798, 861, 909
BseNI ACTGG 4 cut(s) 336, 608, 661, 1186
BseRI GAGGAG 2 cut(s) 290, 770
BseSI GKGCMC 2 cut(s) 627, 886
BseXI GCAGC 4 cut(s) 390, 412, 1015, 1085
BseYI CCCAGC 1 cut(s) 182
Bsh1236I CGCG 1 cut(s) 536
Bsh1285I CGRYCG 1 cut(s) 481
BshFI GGCC 5 cut(s) 224, 281, 625, 1228, 1261
BshTI ACCGGT 1 cut(s) 266
BsiEI CGRYCG 1 cut(s) 481
BsiHKAI GWGCWC 1 cut(s) 1201
BsiHKCI CYCGRG 2 cut(s) 885, 1166
BsiSI CCGG 7 cut(s) 227, 267, 365, 886, 994, 1077, 1223
BslFI GGGAC 4 cut(s) 331, 365, 776, 902
BsmAI GTCTC 1 cut(s) 292
BsmFI GGGAC 4 cut(s) 331, 365, 776, 902
BsnI GGCC 5 cut(s) 224, 281, 625, 1228, 1261
Bso31I GGTCTC 1 cut(s) 292
BsoBI CYCGRG 2 cut(s) 885, 1166
Bsp120I GGGCCC 1 cut(s) 623
Bsp1286I GDGCHC 4 cut(s) 627, 886, 1001, 1201
Bsp143I GATC 5 cut(s) 145, 478, 690, 720, 831
Bsp19I CCATGG 1 cut(s) 349
BspACI CCGC 5 cut(s) 534, 536, 675, 715, 760
BspANI GGCC 5 cut(s) 224, 281, 625, 1228, 1261
BspCNI CTCAG 3 cut(s) 799, 862, 910
BspFNI CGCG 1 cut(s) 536
BspLI GGNNCC 7 cut(s) 140, 225, 238, 336, 625, 1000, 1227
BspMI ACCTGC 1 cut(s) 78
BspOI GCTAGC 1 cut(s) 732
BspPI GGATC 2 cut(s) 140, 685
BspQI GCTCTTC 2 cut(s) 57, 945
BspTNI GGTCTC 1 cut(s) 292
BsrBI CCGCTC 1 cut(s) 760
BsrDI GCAATG 2 cut(s) 198, 739
BsrFI RCCGGY 1 cut(s) 266
BsrI ACTGG 4 cut(s) 336, 608, 661, 1186
BssAI RCCGGY 1 cut(s) 266
BssMI GATC 5 cut(s) 145, 478, 690, 720, 831
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 2 cut(s) 37, 349
Bst2UI CCWGG 5 cut(s) 167, 210, 291, 628, 859
Bst4CI ACNGT 2 cut(s) 345, 1257
Bst6I CTCTTC 4 cut(s) 57, 208, 767, 945
BstACI GRCGYC 1 cut(s) 63
BstC8I GCNNGC 2 cut(s) 730, 1026
BstDEI CTNAG 6 cut(s) 303, 384, 807, 870, 918, 1084
BstDSI CCRYGG 2 cut(s) 349, 534
BstENI CCTNNNNNAGG 2 cut(s) 213, 772
BstF5I GGATG 3 cut(s) 52, 193, 245
BstFNI CGCG 1 cut(s) 536
BstH2I RGCGCY 1 cut(s) 958
BstHHI GCGC 2 cut(s) 444, 957
BstKTI GATC 5 cut(s) 148, 481, 693, 723, 834
BstMAI GTCTC 1 cut(s) 292
BstMBI GATC 5 cut(s) 145, 478, 690, 720, 831
BstMCI CGRYCG 1 cut(s) 481
BstMWI GCNNNNNNNGC 5 cut(s) 397, 448, 672, 952, 1111
BstNI CCWGG 5 cut(s) 167, 210, 291, 628, 859
BstNSI RCATGY 1 cut(s) 1160
BstSLI GKGCMC 2 cut(s) 627, 886
BstUI CGCG 1 cut(s) 536
BstV1I GCAGC 4 cut(s) 390, 412, 1015, 1085
BstX2I RGATCY 1 cut(s) 831
BstYI RGATCY 1 cut(s) 831
BsuRI GGCC 5 cut(s) 224, 281, 625, 1228, 1261
BtgI CCRYGG 2 cut(s) 349, 534
BtsCI GGATG 3 cut(s) 52, 193, 245
BtsIMutI CAGTG 3 cut(s) 341, 668, 1262
BveI ACCTGC 1 cut(s) 78
Cac8I GCNNGC 2 cut(s) 730, 1026
CaiI CAGNNNCTG 1 cut(s) 406
CfoI GCGC 2 cut(s) 444, 957
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 5 cut(s) 223, 280, 623, 624, 1226
Cfr42I CCGCGG 1 cut(s) 537
Cfr9I CCCGGG 1 cut(s) 885
Csp6I GTAC 5 cut(s) 133, 415, 571, 1057, 1081
CspAI ACCGGT 1 cut(s) 266
CviAII CATG 9 cut(s) 158, 350, 544, 568, 895, 924, 1018, 1136, 1157
CviQI GTAC 5 cut(s) 133, 415, 571, 1057, 1081
DdeI CTNAG 6 cut(s) 303, 384, 807, 870, 918, 1084
DpnI GATC 5 cut(s) 147, 480, 692, 722, 833
DpnII GATC 5 cut(s) 145, 478, 690, 720, 831
DriI GACNNNNNGTC 1 cut(s) 73
Eam1104I CTCTTC 4 cut(s) 57, 208, 767, 945
Eam1105I GACNNNNNGTC 1 cut(s) 73
EarI CTCTTC 4 cut(s) 57, 208, 767, 945
EciI GGCGGA 2 cut(s) 690, 730
Eco130I CCWWGG 2 cut(s) 37, 349
Eco24I GRGCYC 2 cut(s) 627, 1001
Eco31I GGTCTC 1 cut(s) 292
Eco32I GATATC 1 cut(s) 120
Eco57I CTGAAG 2 cut(s) 171, 927
Eco88I CYCGRG 2 cut(s) 885, 1166
EcoNI CCTNNNNNAGG 2 cut(s) 213, 772
EcoO109I RGGNCCY 4 cut(s) 223, 280, 623, 1226
EcoRII CCWGG 5 cut(s) 165, 208, 289, 626, 857
EcoRV GATATC 1 cut(s) 120
EcoT14I CCWWGG 2 cut(s) 37, 349
EcoT38I GRGCYC 2 cut(s) 627, 1001
ErhI CCWWGG 2 cut(s) 37, 349
FaeI CATG 9 cut(s) 161, 353, 547, 571, 898, 927, 1021, 1139, 1160
FalI AAGNNNNNCTT 4 cut(s) 93, 125, 942, 974
FaqI GGGAC 4 cut(s) 331, 365, 776, 902
FatI CATG 9 cut(s) 157, 349, 543, 567, 894, 923, 1017, 1135, 1156
FauI CCCGC 1 cut(s) 753
FblI GTMKAC 1 cut(s) 66
Fnu4HI GCNGC 4 cut(s) 401, 404, 1029, 1074
FokI GGATG 3 cut(s) 59, 200, 232
FriOI GRGCYC 2 cut(s) 627, 1001
Fsp4HI GCNGC 4 cut(s) 401, 404, 1029, 1074
FspBI CTAG 6 cut(s) 377, 729, 842, 947, 965, 1161
GlaI GCGC 2 cut(s) 443, 956
GluI GCNGC 4 cut(s) 401, 404, 1029, 1074
GsaI CCCAGC 1 cut(s) 186
GsuI CTGGAG 2 cut(s) 353, 833
HaeII RGCGCY 1 cut(s) 958
HaeIII GGCC 5 cut(s) 224, 281, 625, 1228, 1261
HapII CCGG 7 cut(s) 227, 267, 365, 886, 994, 1077, 1223
HhaI GCGC 2 cut(s) 444, 957
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 9 cut(s) 161, 353, 547, 571, 898, 927, 1021, 1139, 1160
Hin6I GCGC 2 cut(s) 442, 955
HinP1I GCGC 2 cut(s) 442, 955
HincII GTYRAC 3 cut(s) 67, 264, 658
HindII GTYRAC 3 cut(s) 67, 264, 658
HinfI GANTC 6 cut(s) 172, 764, 785, 890, 911, 920
HpaI GTTAAC 1 cut(s) 658
HpaII CCGG 7 cut(s) 227, 267, 365, 886, 994, 1077, 1223
HphI GGTGA 4 cut(s) 690, 700, 737, 814
Hpy166II GTNNAC 7 cut(s) 67, 264, 506, 601, 658, 1015, 1240
Hpy188I TCNGA 4 cut(s) 124, 483, 798, 838
Hpy188III TCNNGA 4 cut(s) 113, 149, 327, 1202
Hpy8I GTNNAC 7 cut(s) 67, 264, 506, 601, 658, 1015, 1240
Hpy99I CGWCG 1 cut(s) 68
HpyCH4III ACNGT 2 cut(s) 345, 1257
HpyCH4IV ACGT 2 cut(s) 63, 650
HpyF10VI GCNNNNNNNGC 5 cut(s) 397, 448, 672, 952, 1111
HpyF3I CTNAG 6 cut(s) 303, 384, 807, 870, 918, 1084
HpySE526I ACGT 2 cut(s) 63, 650
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 9 cut(s) 161, 353, 547, 571, 898, 927, 1021, 1139, 1160
HspAI GCGC 2 cut(s) 442, 955
KspAI GTTAAC 1 cut(s) 658
KspI CCGCGG 1 cut(s) 537
Kzo9I GATC 5 cut(s) 145, 478, 690, 720, 831
LguI GCTCTTC 2 cut(s) 57, 945
LmnI GCTCC 8 cut(s) 242, 291, 334, 483, 757, 838, 943, 1004
Lsp1109I GCAGC 4 cut(s) 390, 412, 1015, 1085
LweI GCATC 3 cut(s) 37, 827, 1011
MaeI CTAG 6 cut(s) 377, 729, 842, 947, 965, 1161
MaeII ACGT 2 cut(s) 63, 650
MaeIII GTNAC 4 cut(s) 339, 549, 743, 802
MalI GATC 5 cut(s) 147, 480, 692, 722, 833
MbiI CCGCTC 1 cut(s) 760
MboI GATC 5 cut(s) 145, 478, 690, 720, 831
MflI RGATCY 1 cut(s) 831
MhlI GDGCHC 4 cut(s) 627, 886, 1001, 1201
MluCI AATT 6 cut(s) 192, 487, 520, 588, 1047, 1097
MlyI GAGTC 4 cut(s) 758, 794, 884, 929
MroXI GAANNNNTTC 1 cut(s) 108
MseI TTAA 2 cut(s) 657, 791
MspA1I CMGCKG 2 cut(s) 403, 536
MspI CCGG 7 cut(s) 227, 267, 365, 886, 994, 1077, 1223
MvaI CCWGG 5 cut(s) 167, 210, 291, 628, 859
MvnI CGCG 1 cut(s) 536
MwoI GCNNNNNNNGC 5 cut(s) 397, 448, 672, 952, 1111
NciI CCSGG 7 cut(s) 227, 365, 886, 887, 995, 1078, 1224
NcoI CCATGG 1 cut(s) 349
NdeII GATC 5 cut(s) 145, 478, 690, 720, 831
NheI GCTAGC 1 cut(s) 728
NlaIII CATG 9 cut(s) 161, 353, 547, 571, 898, 927, 1021, 1139, 1160
NlaIV GGNNCC 7 cut(s) 140, 225, 238, 336, 625, 1000, 1227
NmeAIII GCCGAG 2 cut(s) 229, 1214
NmuCI GTSAC 3 cut(s) 339, 743, 802
NspI RCATGY 1 cut(s) 1160
PasI CCCWGGG 1 cut(s) 627
PciSI GCTCTTC 2 cut(s) 57, 945
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 2 cut(s) 172, 911
PfoI TCCNGGA 1 cut(s) 165
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 4 cut(s) 402, 405, 1030, 1075
Ple19I CGATCG 1 cut(s) 481
PleI GAGTC 4 cut(s) 758, 793, 884, 928
PpsI GAGTC 4 cut(s) 758, 793, 884, 928
Psp6I CCWGG 5 cut(s) 165, 208, 289, 626, 857
PspFI CCCAGC 1 cut(s) 182
PspGI CCWGG 5 cut(s) 165, 208, 289, 626, 857
PspN4I GGNNCC 7 cut(s) 140, 225, 238, 336, 625, 1000, 1227
PspOMI GGGCCC 1 cut(s) 623
PspPI GGNCC 5 cut(s) 223, 280, 623, 624, 1226
PstNI CAGNNNCTG 1 cut(s) 406
PsuI RGATCY 1 cut(s) 831
PvuI CGATCG 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 5 cut(s) 134, 416, 572, 1058, 1082
RsaNI GTAC 5 cut(s) 133, 415, 571, 1057, 1081
SacII CCGCGG 1 cut(s) 537
SalI GTCGAC 1 cut(s) 65
SapI GCTCTTC 2 cut(s) 57, 945
SaqAI TTAA 2 cut(s) 657, 791
SatI GCNGC 4 cut(s) 401, 404, 1029, 1074
Sau3AI GATC 5 cut(s) 145, 478, 690, 720, 831
Sau96I GGNCC 5 cut(s) 223, 280, 623, 624, 1226
SchI GAGTC 4 cut(s) 758, 794, 884, 929
SduI GDGCHC 4 cut(s) 627, 886, 1001, 1201
SfaNI GCATC 3 cut(s) 37, 827, 1011
Sfr303I CCGCGG 1 cut(s) 537
SgrBI CCGCGG 1 cut(s) 537
SmaI CCCGGG 1 cut(s) 887
SmlI CTYRAG 3 cut(s) 113, 1115, 1200
SmoI CTYRAG 3 cut(s) 113, 1115, 1200
SpeI ACTAGT 1 cut(s) 376
Sse9I AATT 6 cut(s) 192, 487, 520, 588, 1047, 1097
SsiI CCGC 5 cut(s) 534, 536, 675, 715, 760
SspMI CTAG 6 cut(s) 377, 729, 842, 947, 965, 1161
StyI CCWWGG 2 cut(s) 37, 349
TaaI ACNGT 2 cut(s) 345, 1257
TaiI ACGT 2 cut(s) 66, 653
TaqI TCGA 4 cut(s) 66, 95, 477, 821
TasI AATT 6 cut(s) 192, 487, 520, 588, 1047, 1097
TatI WGTACW 1 cut(s) 1056
TfiI GAWTC 2 cut(s) 172, 911
Tru1I TTAA 2 cut(s) 657, 791
Tru9I TTAA 2 cut(s) 657, 791
TscAI CASTG 3 cut(s) 348, 668, 1262
TseFI GTSAC 3 cut(s) 339, 743, 802
TseI GCWGC 4 cut(s) 400, 403, 1028, 1073
Tsp45I GTSAC 3 cut(s) 339, 743, 802
TspDTI ATGAA 3 cut(s) 17, 911, 1104
TspMI CCCGGG 1 cut(s) 885
TspRI CASTG 3 cut(s) 348, 668, 1262
XagI CCTNNNNNAGG 2 cut(s) 213, 772
XapI RAATTY 1 cut(s) 1097
XceI RCATGY 1 cut(s) 1160
XmaI CCCGGG 1 cut(s) 885
XmiI GTMKAC 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 6 cut(s) 377, 729, 842, 947, 965, 1161
ZraI GACGTC 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.