Rmu_sc0007415.1_g000040

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007415.1
OG0000087
Physical Location & Seq
Forward (+)
192216 .. 194051
1836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007415.1_g000040.1.cds

Sequence Viewer

Length: 1560 bp
atgttgaacctgtcaccggggcagctgacccagaatgcttggagacaaattttgagtatgatggccatgtgggacttgtgcctgcaagggtggcccaccatcaatgaattccgagctgtgtaccgggtcctatactcgaggaaacaatcctgtcaagggatcgtgacatttgcctcccgggactacgagcccctagtcaccgatatgcccacctctcagagtaagaggtggaggaataaggtgtttcttgctagaggacgttggcagattaagaataagaaatggaacctaacgggtacgtttcaggccatcggggaccagtcttactctttatccgaggttgagagaaaacagatagcccgggtatacgctgtatgggttgaagaagaaagaatgaaagtgtcgaagaggaaaccccggaagggcaaggaagacgacaagatgaacaataacgcactcatggacatgcttatgaaccaaggagaagatgccctgcacattgatgtcgatctctcgtcaaaggctacgggccgcttacatgacgaacttctccttgagatagatgacgatgggtacggtcatcctgatcctaaggcccccgttacccagagtgaccagcttcttgccggggacattgtcactattactgataccggaagaggaaaggcgccggtgtctggctctatatcctctctttcttccgggtcaacagggagcgaggaaggtttgctacctggcgagaagaaaaggcaccataggcatcaccatcggagagggaacaaggaggatgtcacctacagtggtagggacgttaaggggacggagcccaagaggcaaaagagaaatcctccgagaccggaagcgtccccatcgcttgggctcttgtctcctgccattccaatagtcccgaagaaacccatcaagcaattgctgagagagtacggggttgctgataaaaaattcatgcgctctatgctcgccgatttgaaggatatagacctcgatcgggcactgttcaacgtgtacgcgattgatgcgagcaaggaagatacgcacttgaaggaggaggttagcagtttctccaggcaagtgaagtatcttcaaggggagaagggcaagctggagaaggagtgggactccttgaagaagaaaatagagtccttatctcctatggtgatcgagctgaaggcagtgaagcagcggatcgcggagctcgaatgtgagttgtctggggtaatggatgaggtgaagagtgccttggactctgagaaggaagctgcaaaatctgccacgtcatggaaggcgagagcagagagcctggaggagcgccttcctgcagaaaggcaagaggccgttgccgagtacaagggctctcaagagcttatgaacatgctcctcactgcccaagacaaagccgttatcaccaagtataaagagtttgttgcggccaggtatatggatgacgccaagttcaggcgggaacttcttgaaaaaaaagaagaaagagtaggaggctgcatcccggggagatgcaggtggttcgcgaagtaccggggctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

519

Amino Acids

59.09

Weight (kDa)

9.2

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1524
Acc36I ACCTGC 1 cut(s) 1524
AccB1I GGYRCC 2 cut(s) 667, 750
AccB7I CCANNNNNTGG 2 cut(s) 875, 1296
AccI GTMKAC 1 cut(s) 366
AccII CGCG 3 cut(s) 1028, 1208, 1544
AciI CCGC 5 cut(s) 532, 1201, 1208, 1445, 1477
AclWI GGATC 3 cut(s) 167, 581, 1211
AcoI YGGCCR 2 cut(s) 63, 1446
AcsI RAATTY 3 cut(s) 48, 107, 959
AcuI CTGAAG 1 cut(s) 1205
AcyI GRCGYC 2 cut(s) 668, 1464
AfaI GTAC 7 cut(s) 122, 298, 575, 941, 1025, 1364, 1550
AfiI CCNNNNNNNGG 8 cut(s) 16, 156, 422, 677, 875, 1006, 1296, 1473
AflIII ACRYGT 1 cut(s) 1020
AgsI TTSAA 8 cut(s) 7, 383, 988, 1018, 1060, 1103, 1144, 1490
AjiI CACGTC 1 cut(s) 1293
AjnI CCWGG 4 cut(s) 733, 1082, 1317, 1448
AjuI GAANNNNNNNTTGG 2 cut(s) 1241, 1273
AluBI AGCT 8 cut(s) 25, 116, 619, 1120, 1183, 1213, 1277, 1381
AluI AGCT 8 cut(s) 25, 116, 619, 1120, 1183, 1213, 1277, 1381
Alw21I GWGCWC 1 cut(s) 1215
Alw26I GTCTC 3 cut(s) 37, 847, 891
AlwI GGATC 3 cut(s) 167, 581, 1211
Ama87I CYCGRG 4 cut(s) 136, 177, 360, 1522
AoxI GGCC 7 cut(s) 63, 92, 306, 529, 594, 1350, 1446
ApeKI GCWGC 4 cut(s) 22, 1198, 1277, 1515
ApoI RAATTY 3 cut(s) 48, 107, 959
AspLEI GCGC 3 cut(s) 670, 969, 1329
AspS9I GGNCC 5 cut(s) 93, 127, 316, 529, 595
AsuHPI GGTGA 7 cut(s) 6, 190, 755, 784, 1186, 1258, 1414
AvaI CYCGRG 4 cut(s) 136, 177, 360, 1522
AvaII GGWCC 2 cut(s) 127, 316
AxyI CCTNAGG 1 cut(s) 591
BaeGI GKGCMC 1 cut(s) 1012
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 2 cut(s) 667, 750
BanII GRGCYC 5 cut(s) 192, 828, 882, 1215, 1373
BarI GAAGNNNNNNTAC 2 cut(s) 714, 746
BbsI GAAGAC 1 cut(s) 438
Bbv12I GWGCWC 1 cut(s) 1215
BbvI GCAGC 4 cut(s) 34, 1210, 1264, 1502
BccI CCATC 7 cut(s) 55, 107, 317, 563, 774, 877, 926
BceAI ACGGC 2 cut(s) 1337, 1400
BcgI CGANNNNNNTGC 4 cut(s) 749, 783, 1522, 1556
BciT130I CCWGG 4 cut(s) 735, 1084, 1319, 1450
BcoDI GTCTC 3 cut(s) 37, 847, 891
BfaI CTAG 2 cut(s) 194, 252
BfmI CTRYAG 2 cut(s) 796, 1335
BfoI RGCGCY 2 cut(s) 671, 1330
BfuAI ACCTGC 1 cut(s) 1524
BglI GCCNNNNNGGC 1 cut(s) 832
BisI GCNGC 6 cut(s) 23, 532, 1199, 1278, 1446, 1516
BlsI GCNGC 6 cut(s) 24, 533, 1200, 1279, 1447, 1517
Bme18I GGWCC 2 cut(s) 127, 316
BmeT110I CYCGRG 4 cut(s) 136, 177, 360, 1522
BmgBI CACGTC 1 cut(s) 1293
BmgT120I GGNCC 5 cut(s) 93, 127, 316, 529, 595
BmiI GGNNCC 7 cut(s) 128, 287, 317, 597, 669, 752, 825
BmsI GCATC 5 cut(s) 478, 769, 1024, 1520, 1527
BpiI GAAGAC 1 cut(s) 438
BplI GAGNNNNNCTC 4 cut(s) 832, 864, 1121, 1153
BpmI CTGGAG 3 cut(s) 1066, 1142, 1340
BpuEI CTTGAG 2 cut(s) 575, 1359
BsaBI GATNNNNATC 1 cut(s) 507
BsaHI GRCGYC 2 cut(s) 668, 1464
BsaI GGTCTC 1 cut(s) 847
BsaWI WCCGGW 2 cut(s) 653, 856
BsaXI ACNNNNNCTCC 2 cut(s) 1115, 1145
Bsc4I CCNNNNNNNGG 8 cut(s) 16, 156, 422, 677, 875, 1006, 1296, 1473
Bse118I RCCGGY 1 cut(s) 670
Bse1I ACTGG 1 cut(s) 319
Bse21I CCTNAGG 1 cut(s) 591
Bse8I GATNNNNATC 1 cut(s) 507
BseBI CCWGG 4 cut(s) 735, 1084, 1319, 1450
BseGI GGATG 5 cut(s) 580, 793, 1246, 1465, 1518
BseJI GATNNNNATC 1 cut(s) 507
BseLI CCNNNNNNNGG 8 cut(s) 16, 156, 422, 677, 875, 1006, 1296, 1473
BseMII CTCAG 3 cut(s) 230, 923, 1257
BseNI ACTGG 1 cut(s) 319
BseRI GAGGAG 3 cut(s) 1079, 1337, 1385
BseSI GKGCMC 1 cut(s) 1012
BseXI GCAGC 4 cut(s) 34, 1210, 1264, 1502
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 3 cut(s) 1028, 1208, 1544
Bsh1285I CGRYCG 1 cut(s) 1006
BshFI GGCC 7 cut(s) 65, 94, 308, 531, 596, 1352, 1448
BshNI GGYRCC 2 cut(s) 667, 750
BsiEI CGRYCG 1 cut(s) 1006
BsiHKAI GWGCWC 1 cut(s) 1215
BsiHKCI CYCGRG 4 cut(s) 136, 177, 360, 1522
BslFI GGGAC 9 cut(s) 86, 194, 329, 644, 821, 832, 850, 890, 1148
BslI CCNNNNNNNGG 8 cut(s) 16, 156, 422, 677, 875, 1006, 1296, 1473
BsmAI GTCTC 3 cut(s) 37, 847, 891
BsmFI GGGAC 9 cut(s) 86, 194, 329, 644, 821, 832, 850, 890, 1148
BsmI GAATGC 1 cut(s) 40
BsnI GGCC 7 cut(s) 65, 94, 308, 531, 596, 1352, 1448
Bso31I GGTCTC 1 cut(s) 847
BsoBI CYCGRG 4 cut(s) 136, 177, 360, 1522
Bsp1286I GDGCHC 6 cut(s) 192, 828, 882, 1012, 1215, 1373
Bsp143I GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
Bsp68I TCGCGA 1 cut(s) 1544
BspACI CCGC 5 cut(s) 532, 1201, 1208, 1445, 1477
BspANI GGCC 7 cut(s) 65, 94, 308, 531, 596, 1352, 1448
BspCNI CTCAG 3 cut(s) 229, 924, 1258
BspFNI CGCG 3 cut(s) 1028, 1208, 1544
BspLI GGNNCC 7 cut(s) 128, 287, 317, 597, 669, 752, 825
BspMAI CTGCAG 1 cut(s) 1339
BspMI ACCTGC 1 cut(s) 1524
BspPI GGATC 3 cut(s) 167, 581, 1211
BspT107I GGYRCC 2 cut(s) 667, 750
BspTNI GGTCTC 1 cut(s) 847
BsrFI RCCGGY 1 cut(s) 670
BsrI ACTGG 1 cut(s) 319
BssAI RCCGGY 1 cut(s) 670
BssMI GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
BssNAI GTATAC 1 cut(s) 367
BssNI GRCGYC 2 cut(s) 668, 1464
BssT1I CCWWGG 2 cut(s) 478, 1257
Bst1107I GTATAC 1 cut(s) 367
Bst2UI CCWGG 4 cut(s) 735, 1084, 1319, 1450
Bst4CI ACNGT 3 cut(s) 578, 800, 1014
Bst6I CTCTTC 3 cut(s) 401, 652, 1244
BstACI GRCGYC 2 cut(s) 668, 1464
BstAPI GCANNNNNTGC 1 cut(s) 1286
BstC8I GCNNGC 4 cut(s) 83, 978, 1039, 1118
BstDEI CTNAG 4 cut(s) 216, 591, 932, 1266
BstF5I GGATG 5 cut(s) 580, 793, 1246, 1465, 1518
BstFNI CGCG 3 cut(s) 1028, 1208, 1544
BstH2I RGCGCY 2 cut(s) 671, 1330
BstHHI GCGC 3 cut(s) 670, 969, 1329
BstKTI GATC 6 cut(s) 162, 511, 589, 1006, 1179, 1206
BstMAI GTCTC 3 cut(s) 37, 847, 891
BstMBI GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
BstMCI CGRYCG 1 cut(s) 1006
BstMWI GCNNNNNNNGC 6 cut(s) 91, 757, 832, 973, 1034, 1286
BstNI CCWGG 4 cut(s) 735, 1084, 1319, 1450
BstNSI RCATGY 2 cut(s) 469, 1393
BstSFI CTRYAG 2 cut(s) 796, 1335
BstSLI GKGCMC 1 cut(s) 1012
BstUI CGCG 3 cut(s) 1028, 1208, 1544
BstV1I GCAGC 4 cut(s) 34, 1210, 1264, 1502
BstV2I GAAGAC 1 cut(s) 438
BstXI CCANNNNNNTGG 1 cut(s) 1456
BstZ17I GTATAC 1 cut(s) 367
Bsu36I CCTNAGG 1 cut(s) 591
BsuRI GGCC 7 cut(s) 65, 94, 308, 531, 596, 1352, 1448
BtgZI GCGATG 1 cut(s) 855
BtrI CACGTC 1 cut(s) 1293
BtsCI GGATG 5 cut(s) 580, 793, 1246, 1465, 1518
BtsI GCAGTG 2 cut(s) 1197, 1398
BtsIMutI CAGTG 4 cut(s) 805, 1010, 1197, 1398
BtuMI TCGCGA 1 cut(s) 1544
BveI ACCTGC 1 cut(s) 1524
Cac8I GCNNGC 4 cut(s) 83, 978, 1039, 1118
CfoI GCGC 3 cut(s) 670, 969, 1329
Cfr10I RCCGGY 1 cut(s) 670
Cfr13I GGNCC 5 cut(s) 93, 127, 316, 529, 595
Cfr9I CCCGGG 3 cut(s) 177, 360, 1522
CseI GACGC 2 cut(s) 852, 1472
Csp6I GTAC 7 cut(s) 121, 297, 574, 940, 1024, 1363, 1549
CviAII CATG 7 cut(s) 67, 460, 466, 539, 964, 1296, 1390
CviQI GTAC 7 cut(s) 121, 297, 574, 940, 1024, 1363, 1549
DdeI CTNAG 4 cut(s) 216, 591, 932, 1266
DinI GGCGCC 1 cut(s) 669
DpnI GATC 6 cut(s) 161, 510, 588, 1005, 1178, 1205
DpnII GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
EaeI YGGCCR 2 cut(s) 63, 1446
Eam1104I CTCTTC 3 cut(s) 401, 652, 1244
EarI CTCTTC 3 cut(s) 401, 652, 1244
Ecl136II GAGCTC 1 cut(s) 1213
Eco130I CCWWGG 2 cut(s) 478, 1257
Eco24I GRGCYC 5 cut(s) 192, 828, 882, 1215, 1373
Eco31I GGTCTC 1 cut(s) 847
Eco47I GGWCC 2 cut(s) 127, 316
Eco53kI GAGCTC 1 cut(s) 1213
Eco57I CTGAAG 1 cut(s) 1205
Eco81I CCTNAGG 1 cut(s) 591
Eco88I CYCGRG 4 cut(s) 136, 177, 360, 1522
EcoICRI GAGCTC 1 cut(s) 1213
EcoO109I RGGNCCY 2 cut(s) 127, 595
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 4 cut(s) 733, 1082, 1317, 1448
EcoT14I CCWWGG 2 cut(s) 478, 1257
EcoT38I GRGCYC 5 cut(s) 192, 828, 882, 1215, 1373
EgeI GGCGCC 1 cut(s) 669
EheI GGCGCC 1 cut(s) 669
ErhI CCWWGG 2 cut(s) 478, 1257
FaeI CATG 7 cut(s) 70, 463, 469, 542, 967, 1299, 1393
FalI AAGNNNNNCTT 2 cut(s) 1241, 1273
FaqI GGGAC 9 cut(s) 86, 194, 329, 644, 821, 832, 850, 890, 1148
FatI CATG 7 cut(s) 66, 459, 465, 538, 963, 1295, 1389
FauI CCCGC 1 cut(s) 1470
FblI GTMKAC 1 cut(s) 366
Fnu4HI GCNGC 6 cut(s) 23, 532, 1199, 1278, 1446, 1516
FokI GGATG 5 cut(s) 567, 800, 1253, 1472, 1505
FriOI GRGCYC 5 cut(s) 192, 828, 882, 1215, 1373
Fsp4HI GCNGC 6 cut(s) 23, 532, 1199, 1278, 1446, 1516
FspBI CTAG 2 cut(s) 194, 252
GlaI GCGC 3 cut(s) 669, 968, 1328
GluI GCNGC 6 cut(s) 23, 532, 1199, 1278, 1446, 1516
GsuI CTGGAG 3 cut(s) 1066, 1142, 1340
HaeII RGCGCY 2 cut(s) 671, 1330
HaeIII GGCC 7 cut(s) 65, 94, 308, 531, 596, 1352, 1448
HgaI GACGC 2 cut(s) 852, 1472
HhaI GCGC 3 cut(s) 670, 969, 1329
Hin1I GRCGYC 2 cut(s) 668, 1464
Hin1II CATG 7 cut(s) 70, 463, 469, 542, 967, 1299, 1393
Hin6I GCGC 3 cut(s) 668, 967, 1327
HinP1I GCGC 3 cut(s) 668, 967, 1327
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HinfI GANTC 3 cut(s) 1136, 1157, 1262
HphI GGTGA 7 cut(s) 6, 190, 755, 784, 1186, 1258, 1414
Hpy166II GTNNAC 4 cut(s) 121, 367, 708, 1024
Hpy188I TCNGA 6 cut(s) 113, 219, 337, 771, 852, 1267
Hpy188III TCNNGA 6 cut(s) 163, 584, 907, 1376, 1487, 1543
Hpy8I GTNNAC 4 cut(s) 121, 367, 708, 1024
HpyCH4III ACNGT 3 cut(s) 578, 800, 1014
HpyCH4IV ACGT 5 cut(s) 259, 299, 810, 1020, 1292
HpyCH4V TGCA 6 cut(s) 85, 496, 1280, 1337, 1518, 1533
HpyF10VI GCNNNNNNNGC 6 cut(s) 91, 757, 832, 973, 1034, 1286
HpyF3I CTNAG 4 cut(s) 216, 591, 932, 1266
HpySE526I ACGT 5 cut(s) 259, 299, 810, 1020, 1292
Hsp92I GRCGYC 2 cut(s) 668, 1464
Hsp92II CATG 7 cut(s) 70, 463, 469, 542, 967, 1299, 1393
HspAI GCGC 3 cut(s) 668, 967, 1327
KasI GGCGCC 1 cut(s) 667
Kzo9I GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
LmnI GCTCC 5 cut(s) 714, 823, 1210, 1324, 1398
Lsp1109I GCAGC 4 cut(s) 34, 1210, 1264, 1502
LweI GCATC 5 cut(s) 478, 769, 1024, 1520, 1527
MaeI CTAG 2 cut(s) 194, 252
MaeII ACGT 5 cut(s) 259, 299, 810, 1020, 1292
MaeIII GTNAC 7 cut(s) 12, 163, 196, 601, 611, 637, 790
MalI GATC 6 cut(s) 161, 510, 588, 1005, 1178, 1205
MboI GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
MfeI CAATTG 1 cut(s) 926
MhlI GDGCHC 6 cut(s) 192, 828, 882, 1012, 1215, 1373
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 4 cut(s) 48, 107, 926, 959
MluNI TGGCCA 1 cut(s) 65
Mly113I GGCGCC 1 cut(s) 668
MlyI GAGTC 3 cut(s) 1130, 1166, 1256
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 2 cut(s) 270, 813
MslI CAYNNNNRTG 4 cut(s) 203, 464, 470, 501
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 2 cut(s) 25, 1201
MunI CAATTG 1 cut(s) 926
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 4 cut(s) 735, 1084, 1319, 1450
MvnI CGCG 3 cut(s) 1028, 1208, 1544
MwoI GCNNNNNNNGC 6 cut(s) 91, 757, 832, 973, 1034, 1286
NarI GGCGCC 1 cut(s) 668
NdeII GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
NlaIII CATG 7 cut(s) 70, 463, 469, 542, 967, 1299, 1393
NlaIV GGNNCC 7 cut(s) 128, 287, 317, 597, 669, 752, 825
NmeAIII GCCGAG 1 cut(s) 1384
NmuCI GTSAC 6 cut(s) 12, 163, 196, 611, 637, 790
NruI TCGCGA 1 cut(s) 1544
NspI RCATGY 2 cut(s) 469, 1393
PaeR7I CTCGAG 1 cut(s) 136
PaqCI CACCTGC 1 cut(s) 1524
PcsI WCGNNNNNNNCGW 1 cut(s) 1212
PctI GAATGC 1 cut(s) 40
PflFI GACNNNGTC 1 cut(s) 635
PflMI CCANNNNNTGG 2 cut(s) 875, 1296
PkrI GCNGC 6 cut(s) 24, 533, 1200, 1279, 1447, 1517
Ple19I CGATCG 1 cut(s) 1006
PleI GAGTC 3 cut(s) 1130, 1165, 1256
PluTI GGCGCC 1 cut(s) 671
PpsI GAGTC 3 cut(s) 1130, 1165, 1256
PpuMI RGGWCCY 1 cut(s) 127
Psp124BI GAGCTC 1 cut(s) 1215
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 4 cut(s) 733, 1082, 1317, 1448
PspGI CCWGG 4 cut(s) 733, 1082, 1317, 1448
PspN4I GGNNCC 7 cut(s) 128, 287, 317, 597, 669, 752, 825
PspPI GGNCC 5 cut(s) 93, 127, 316, 529, 595
PspPPI RGGWCCY 1 cut(s) 127
PspXI VCTCGAGB 1 cut(s) 136
PstI CTGCAG 1 cut(s) 1339
PsyI GACNNNGTC 1 cut(s) 635
PvuI CGATCG 1 cut(s) 1006
PvuII CAGCTG 1 cut(s) 25
RruI TCGCGA 1 cut(s) 1544
RsaI GTAC 7 cut(s) 122, 298, 575, 941, 1025, 1364, 1550
RsaNI GTAC 7 cut(s) 121, 297, 574, 940, 1024, 1363, 1549
RseI CAYNNNNRTG 4 cut(s) 203, 464, 470, 501
SacI GAGCTC 1 cut(s) 1215
SaqAI TTAA 2 cut(s) 270, 813
SatI GCNGC 6 cut(s) 23, 532, 1199, 1278, 1446, 1516
Sau3AI GATC 6 cut(s) 159, 508, 586, 1003, 1176, 1203
Sau96I GGNCC 5 cut(s) 93, 127, 316, 529, 595
SchI GAGTC 3 cut(s) 1130, 1166, 1256
SduI GDGCHC 6 cut(s) 192, 828, 882, 1012, 1215, 1373
SfaNI GCATC 5 cut(s) 478, 769, 1024, 1520, 1527
SfcI CTRYAG 2 cut(s) 796, 1335
SfoI GGCGCC 1 cut(s) 669
Sfr274I CTCGAG 1 cut(s) 136
SgrAI CRCCGGYG 1 cut(s) 670
SinI GGWCC 2 cut(s) 127, 316
SlaI CTCGAG 1 cut(s) 136
SmaI CCCGGG 3 cut(s) 179, 362, 1524
SmiMI CAYNNNNRTG 4 cut(s) 203, 464, 470, 501
SmlI CTYRAG 3 cut(s) 136, 554, 1374
SmoI CTYRAG 3 cut(s) 136, 554, 1374
Sse9I AATT 4 cut(s) 48, 107, 926, 959
SsiI CCGC 5 cut(s) 532, 1201, 1208, 1445, 1477
SspDI GGCGCC 1 cut(s) 667
SspMI CTAG 2 cut(s) 194, 252
SstI GAGCTC 1 cut(s) 1215
StyI CCWWGG 2 cut(s) 478, 1257
TaaI ACNGT 3 cut(s) 578, 800, 1014
TaiI ACGT 5 cut(s) 262, 302, 813, 1023, 1295
TaqI TCGA 6 cut(s) 137, 404, 507, 1002, 1179, 1215
TasI AATT 4 cut(s) 48, 107, 926, 959
TatI WGTACW 1 cut(s) 1362
TauI GCSGC 2 cut(s) 534, 1448
Tru1I TTAA 2 cut(s) 270, 813
Tru9I TTAA 2 cut(s) 270, 813
TscAI CASTG 4 cut(s) 805, 1017, 1197, 1405
TseFI GTSAC 6 cut(s) 12, 163, 196, 611, 637, 790
TseI GCWGC 4 cut(s) 22, 1198, 1277, 1515
Tsp45I GTSAC 6 cut(s) 12, 163, 196, 611, 637, 790
TspDTI ATGAA 6 cut(s) 120, 410, 458, 488, 952, 1400
TspGWI ACGGA 1 cut(s) 836
TspMI CCCGGG 3 cut(s) 177, 360, 1522
TspRI CASTG 4 cut(s) 805, 1017, 1197, 1405
Tth111I GACNNNGTC 1 cut(s) 635
Van91I CCANNNNNTGG 2 cut(s) 875, 1296
VpaK11BI GGWCC 2 cut(s) 127, 316
XapI RAATTY 3 cut(s) 48, 107, 959
XceI RCATGY 2 cut(s) 469, 1393
XhoI CTCGAG 1 cut(s) 136
XmaI CCCGGG 3 cut(s) 177, 360, 1522
XmiI GTMKAC 1 cut(s) 366
XspI CTAG 2 cut(s) 194, 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.