Rmu_sc0011375.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011375.1
OG0000087
Physical Location & Seq
Reverse (-)
18292 .. 19371
1080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011375.1_g000004.1.cds

Sequence Viewer

Length: 657 bp
atgcttggggatctaaaggatattgacctcgaccgggttcgggccaaggataatactccccaggagaatcgccgtcttgcccgggagtcaatgatgcgggcactcttcaatgtgtacgccattgatgccagcgaggaggatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctagagaaggaacgggactcattgagggctgaaatggccgcggctaagcagcggatcgcggagcttgagggtgaagttgctgaggcgcgggaagaggtaaaaaactcccgggactccgagaaaaaggctgcagagtctgccgtttcatggaaggagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcagaagagctcatctctatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggctgccggatatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaggcggcggccaagtttggtgtcggatggatccagtccccggggctctgggtagacttgcttcatgacccagtccctcaactttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

218

Amino Acids

24.83

Weight (kDa)

5.47

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 169
AccI GTMKAC 1 cut(s) 624
AccII CGCG 4 cut(s) 251, 269, 298, 398
AclWI GGATC 5 cut(s) 18, 272, 393, 595, 608
AcoI YGGCCR 2 cut(s) 246, 579
AcsI RAATTY 1 cut(s) 530
AcuI CTGAAG 1 cut(s) 170
AfaI GTAC 2 cut(s) 116, 425
AfiI CCNNNNNNNGG 8 cut(s) 34, 40, 357, 382, 397, 402, 472, 610
AgsI TTSAA 2 cut(s) 109, 493
AjnI CCWGG 3 cut(s) 60, 378, 546
AluBI AGCT 4 cut(s) 211, 274, 442, 527
AluI AGCT 4 cut(s) 211, 274, 442, 527
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 1 cut(s) 548
AlwI GGATC 5 cut(s) 18, 272, 393, 595, 608
AlwNI CAGNNNCTG 1 cut(s) 347
Ama87I CYCGRG 3 cut(s) 81, 318, 610
AoxI GGCC 5 cut(s) 42, 204, 246, 411, 579
ApeKI GCWGC 5 cut(s) 259, 338, 458, 461, 506
ApoI RAATTY 1 cut(s) 530
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 1 cut(s) 42
AsuC2I CCSGG 8 cut(s) 35, 82, 83, 175, 319, 320, 611, 612
AsuHPI GGTGA 2 cut(s) 193, 293
AvaI CYCGRG 3 cut(s) 81, 318, 610
BaeGI GKGCMC 1 cut(s) 103
BamHI GGATCC 1 cut(s) 600
BanII GRGCYC 2 cut(s) 444, 618
BarI GAAGNNNNNNTAC 2 cut(s) 615, 647
BauI CACGAG 1 cut(s) 407
Bbv12I GWGCWC 1 cut(s) 444
BbvCI CCTCAGC 1 cut(s) 291
BbvI GCAGC 5 cut(s) 271, 325, 445, 448, 493
BccI CCATC 1 cut(s) 591
BceAI ACGGC 3 cut(s) 57, 335, 398
BciT130I CCWGG 3 cut(s) 62, 380, 548
BciVI GTATCC 1 cut(s) 133
BcnI CCSGG 8 cut(s) 35, 82, 83, 175, 319, 320, 611, 612
BcoDI GTCTC 1 cut(s) 548
BfaI CTAG 1 cut(s) 212
BfmI CTRYAG 1 cut(s) 339
BfuAI ACCTGC 1 cut(s) 169
BfuI GTATCC 1 cut(s) 133
BisI GCNGC 9 cut(s) 249, 252, 260, 339, 459, 462, 507, 576, 579
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 9 cut(s) 250, 253, 261, 340, 460, 463, 508, 577, 580
BmeT110I CYCGRG 3 cut(s) 81, 318, 610
BmgT120I GGNCC 1 cut(s) 42
BmiI GGNNCC 1 cut(s) 602
BmrI ACTGGG 1 cut(s) 635
BmsI GCATC 2 cut(s) 84, 115
BmuI ACTGGG 1 cut(s) 635
BplI GAGNNNNNCTC 2 cut(s) 431, 463
BpmI CTGGAG 2 cut(s) 401, 569
Bpu10I CCTNAGC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 296
BpuMI CCSGG 8 cut(s) 35, 82, 83, 175, 319, 320, 611, 612
BsaBI GATNNNNATC 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 548
BsaXI ACNNNNNCTCC 2 cut(s) 413, 443
Bsc4I CCNNNNNNNGG 8 cut(s) 34, 40, 357, 382, 397, 402, 472, 610
Bse1I ACTGG 2 cut(s) 604, 641
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 3 cut(s) 62, 380, 548
BseGI GGATG 1 cut(s) 602
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 8 cut(s) 34, 40, 357, 382, 397, 402, 472, 610
BseMII CTCAG 2 cut(s) 282, 447
BseNI ACTGG 2 cut(s) 604, 641
BseRI GAGGAG 3 cut(s) 149, 170, 434
BseSI GKGCMC 1 cut(s) 103
BseXI GCAGC 5 cut(s) 271, 325, 445, 448, 493
Bsh1236I CGCG 4 cut(s) 251, 269, 298, 398
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 5 cut(s) 44, 206, 248, 413, 581
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 1 cut(s) 444
BsiHKCI CYCGRG 3 cut(s) 81, 318, 610
BsiSI CCGG 6 cut(s) 34, 82, 174, 319, 510, 611
BslFI GGGAC 4 cut(s) 239, 335, 592, 629
BslI CCNNNNNNNGG 8 cut(s) 34, 40, 357, 382, 397, 402, 472, 610
BsmAI GTCTC 1 cut(s) 548
BsmFI GGGAC 4 cut(s) 239, 335, 592, 629
BsnI GGCC 5 cut(s) 44, 206, 248, 413, 581
Bso31I GGTCTC 1 cut(s) 548
BsoBI CYCGRG 3 cut(s) 81, 318, 610
Bsp1286I GDGCHC 3 cut(s) 103, 444, 618
Bsp143I GATC 5 cut(s) 10, 264, 385, 565, 600
Bsp1720I GCTNAGC 1 cut(s) 255
BspANI GGCC 5 cut(s) 44, 206, 248, 413, 581
BspCNI CTCAG 2 cut(s) 283, 446
BspFNI CGCG 4 cut(s) 251, 269, 298, 398
BspHI TCATGA 2 cut(s) 483, 634
BspLI GGNNCC 1 cut(s) 602
BspMAI CTGCAG 1 cut(s) 343
BspMI ACCTGC 1 cut(s) 169
BspPI GGATC 5 cut(s) 18, 272, 393, 595, 608
BspQI GCTCTTC 1 cut(s) 432
BspTNI GGTCTC 1 cut(s) 548
BsrI ACTGG 2 cut(s) 604, 641
BssMI GATC 5 cut(s) 10, 264, 385, 565, 600
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 45
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 3 cut(s) 62, 380, 548
Bst6I CTCTTC 3 cut(s) 110, 297, 432
BstAPI GCANNNNNTGC 1 cut(s) 347
BstC8I GCNNGC 3 cut(s) 99, 130, 456
BstDEI CTNAG 3 cut(s) 255, 291, 433
BstDSI CCRYGG 3 cut(s) 249, 396, 414
BstF5I GGATG 1 cut(s) 602
BstFNI CGCG 4 cut(s) 251, 269, 298, 398
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 5 cut(s) 13, 267, 388, 568, 603
BstMAI GTCTC 1 cut(s) 548
BstMBI GATC 5 cut(s) 10, 264, 385, 565, 600
BstMCI CGRYCG 1 cut(s) 34
BstMWI GCNNNNNNNGC 3 cut(s) 125, 245, 347
BstNI CCWGG 3 cut(s) 62, 380, 548
BstSFI CTRYAG 1 cut(s) 339
BstSLI GKGCMC 1 cut(s) 103
BstUI CGCG 4 cut(s) 251, 269, 298, 398
BstV1I GCAGC 5 cut(s) 271, 325, 445, 448, 493
BstX2I RGATCY 2 cut(s) 10, 600
BstYI RGATCY 2 cut(s) 10, 600
BsuI GTATCC 1 cut(s) 133
BsuRI GGCC 5 cut(s) 44, 206, 248, 413, 581
BtgI CCRYGG 3 cut(s) 249, 396, 414
BtsCI GGATG 1 cut(s) 602
BveI ACCTGC 1 cut(s) 169
Cac8I GCNNGC 3 cut(s) 99, 130, 456
CaiI CAGNNNCTG 1 cut(s) 347
CciI TCATGA 2 cut(s) 483, 634
CfoI GCGC 1 cut(s) 298
Cfr13I GGNCC 1 cut(s) 42
Cfr42I CCGCGG 2 cut(s) 252, 399
Cfr9I CCCGGG 3 cut(s) 81, 318, 610
Csp6I GTAC 2 cut(s) 115, 424
CviAII CATG 4 cut(s) 194, 357, 484, 635
CviQI GTAC 2 cut(s) 115, 424
DdeI CTNAG 3 cut(s) 255, 291, 433
DpnI GATC 5 cut(s) 12, 266, 387, 567, 602
DpnII GATC 5 cut(s) 10, 264, 385, 565, 600
EaeI YGGCCR 2 cut(s) 246, 579
Eam1104I CTCTTC 3 cut(s) 110, 297, 432
EarI CTCTTC 3 cut(s) 110, 297, 432
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 1 cut(s) 45
Eco24I GRGCYC 2 cut(s) 444, 618
Eco31I GGTCTC 1 cut(s) 548
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 1 cut(s) 170
Eco88I CYCGRG 3 cut(s) 81, 318, 610
EcoICRI GAGCTC 1 cut(s) 442
EcoRII CCWGG 3 cut(s) 60, 378, 546
EcoT14I CCWWGG 1 cut(s) 45
EcoT38I GRGCYC 2 cut(s) 444, 618
ErhI CCWWGG 1 cut(s) 45
FaeI CATG 4 cut(s) 197, 360, 487, 638
FaiI YATR 5 cut(s) 195, 358, 452, 485, 636
FaqI GGGAC 4 cut(s) 239, 335, 592, 629
FatI CATG 4 cut(s) 193, 356, 483, 634
FauI CCCGC 4 cut(s) 90, 291, 403, 531
FblI GTMKAC 1 cut(s) 624
Fnu4HI GCNGC 9 cut(s) 249, 252, 260, 339, 459, 462, 507, 576, 579
FokI GGATG 1 cut(s) 609
FriOI GRGCYC 2 cut(s) 444, 618
Fsp4HI GCNGC 9 cut(s) 249, 252, 260, 339, 459, 462, 507, 576, 579
FspBI CTAG 1 cut(s) 212
GlaI GCGC 1 cut(s) 297
GluI GCNGC 9 cut(s) 249, 252, 260, 339, 459, 462, 507, 576, 579
GsuI CTGGAG 2 cut(s) 401, 569
HaeIII GGCC 5 cut(s) 44, 206, 248, 413, 581
HapII CCGG 6 cut(s) 34, 82, 174, 319, 510, 611
HhaI GCGC 1 cut(s) 298
Hin1II CATG 4 cut(s) 197, 360, 487, 638
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HinfI GANTC 5 cut(s) 67, 86, 227, 323, 344
HpaII CCGG 6 cut(s) 34, 82, 174, 319, 510, 611
HphI GGTGA 2 cut(s) 193, 293
Hpy166II GTNNAC 2 cut(s) 115, 625
Hpy188I TCNGA 4 cut(s) 150, 328, 436, 596
Hpy188III TCNNGA 3 cut(s) 484, 569, 635
Hpy8I GTNNAC 2 cut(s) 115, 625
HpyAV CCTTC 6 cut(s) 145, 196, 211, 355, 361, 401
HpyCH4V TGCA 1 cut(s) 341
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 245, 347
HpyF3I CTNAG 3 cut(s) 255, 291, 433
Hsp92II CATG 4 cut(s) 197, 360, 487, 638
HspAI GCGC 1 cut(s) 296
KspI CCGCGG 2 cut(s) 252, 399
Kzo9I GATC 5 cut(s) 10, 264, 385, 565, 600
LguI GCTCTTC 1 cut(s) 432
LmnI GCTCC 1 cut(s) 271
Lsp1109I GCAGC 5 cut(s) 271, 325, 445, 448, 493
LweI GCATC 2 cut(s) 84, 115
MaeI CTAG 1 cut(s) 212
MalI GATC 5 cut(s) 12, 266, 387, 567, 602
MboI GATC 5 cut(s) 10, 264, 385, 565, 600
MboII GAAGA 5 cut(s) 97, 182, 314, 449, 571
MflI RGATCY 2 cut(s) 10, 600
MhlI GDGCHC 3 cut(s) 103, 444, 618
MluCI AATT 1 cut(s) 530
MlyI GAGTC 4 cut(s) 95, 221, 317, 353
MmeI TCCRAC 1 cut(s) 574
MseI TTAA 1 cut(s) 655
MslI CAYNNNNRTG 1 cut(s) 449
MspA1I CMGCKG 3 cut(s) 251, 262, 398
MspI CCGG 6 cut(s) 34, 82, 174, 319, 510, 611
MvaI CCWGG 3 cut(s) 62, 380, 548
MvnI CGCG 4 cut(s) 251, 269, 298, 398
MwoI GCNNNNNNNGC 3 cut(s) 125, 245, 347
NciI CCSGG 8 cut(s) 35, 82, 83, 175, 319, 320, 611, 612
NdeII GATC 5 cut(s) 10, 264, 385, 565, 600
NlaIII CATG 4 cut(s) 197, 360, 487, 638
NlaIV GGNNCC 1 cut(s) 602
PagI TCATGA 2 cut(s) 483, 634
PaqCI CACCTGC 1 cut(s) 169
PciSI GCTCTTC 1 cut(s) 432
PfeI GAWTC 1 cut(s) 67
PflFI GACNNNGTC 1 cut(s) 641
PfoI TCCNGGA 1 cut(s) 546
PkrI GCNGC 9 cut(s) 250, 253, 261, 340, 460, 463, 508, 577, 580
PleI GAGTC 4 cut(s) 94, 221, 317, 352
PpsI GAGTC 4 cut(s) 94, 221, 317, 352
Psp124BI GAGCTC 1 cut(s) 444
Psp6I CCWGG 3 cut(s) 60, 378, 546
PspGI CCWGG 3 cut(s) 60, 378, 546
PspN4I GGNNCC 1 cut(s) 602
PspPI GGNCC 1 cut(s) 42
PstI CTGCAG 1 cut(s) 343
PstNI CAGNNNCTG 1 cut(s) 347
PsuI RGATCY 2 cut(s) 10, 600
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 2 cut(s) 116, 425
RsaNI GTAC 2 cut(s) 115, 424
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 444
SacII CCGCGG 2 cut(s) 252, 399
SapI GCTCTTC 1 cut(s) 432
SaqAI TTAA 1 cut(s) 655
SatI GCNGC 9 cut(s) 249, 252, 260, 339, 459, 462, 507, 576, 579
Sau3AI GATC 5 cut(s) 10, 264, 385, 565, 600
Sau96I GGNCC 1 cut(s) 42
SchI GAGTC 4 cut(s) 95, 221, 317, 353
SduI GDGCHC 3 cut(s) 103, 444, 618
SetI ASST 9 cut(s) 30, 162, 183, 213, 276, 309, 381, 444, 529
SfaNI GCATC 2 cut(s) 84, 115
SfcI CTRYAG 1 cut(s) 339
Sfr303I CCGCGG 2 cut(s) 252, 399
SgrBI CCGCGG 2 cut(s) 252, 399
SmaI CCCGGG 3 cut(s) 83, 320, 612
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 1 cut(s) 275
SmoI CTYRAG 1 cut(s) 275
Sse9I AATT 1 cut(s) 530
SspMI CTAG 1 cut(s) 212
SstI GAGCTC 1 cut(s) 444
StyI CCWWGG 1 cut(s) 45
TaqI TCGA 1 cut(s) 30
TasI AATT 1 cut(s) 530
TatI WGTACW 1 cut(s) 423
TauI GCSGC 4 cut(s) 251, 254, 578, 581
TfiI GAWTC 1 cut(s) 67
Tru1I TTAA 1 cut(s) 655
Tru9I TTAA 1 cut(s) 655
TseI GCWGC 5 cut(s) 259, 338, 458, 461, 506
TspDTI ATGAA 5 cut(s) 182, 345, 500, 537, 623
TspMI CCCGGG 3 cut(s) 81, 318, 610
Tth111I GACNNNGTC 1 cut(s) 641
XapI RAATTY 1 cut(s) 530
XmaI CCCGGG 3 cut(s) 81, 318, 610
XmiI GTMKAC 1 cut(s) 624
XspI CTAG 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.