Rmu_sc0013224.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013224.1
OG0000087
Physical Location & Seq
Forward (+)
17390 .. 18408
1019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013224.1_g000005.1.cds

Sequence Viewer

Length: 954 bp
atgtctggctctatatcatctctgtatgccgggtcagccgggagtgaggaagctttgctacctggtgagaagaagaggcaccataggtaccgccatcggagtaggaacaaggaggacgttacttacactggtagggacgttaagggggcggagcctaagaggcaaaagaaaaatcctccaggactggaagcgtcgcagtcgctcgggctcttatcccctgcttttccactagtccccaagaagtctatcaagcaattgttgagcaagtacgaggtcgctgatgaaaagttcgtgctctctatgctcgccgatttgaaggatataaacctcgatcaggtacaggcaaaggacaataccccgcaagagaatggtcgcctcgcctgggaatcaatgatgcggtcactgttcaacgtgtacgcgattgatgctagagaggaagatacgtacttaaaggaggagggtagcagtctctccgggcaagtgaagtatcttcatagggagaagggcaagctggagaaggagtgggacctgttgaagaagaaggtagagtccttaactcccttggtgaccgagctggaggcagcgaagcaacggaacgcggagctcgaaggtgagttgtcctgggcgagggatgaggttaagagtgcccgagactccgagagggaacctgcagagtctgccaagtcatggaaagcgagagtagagagcctggaggagcgtcttcctatggaaaggcaagaggccgttgccgaatacaagggttcccaagagcttattaacatgttactgaaggctcaggacaaggccgtgatcatgaagtatagagagtgggtggcagccgggtacttagatgaagccaagtttaggtgggggctccttgagaagaggaagaaggagcaggaggcagctgccaaggagggtgtcggtggatctcagagtaccgctcatgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

317

Amino Acids

35.92

Weight (kDa)

7.75

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 676
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 2 cut(s) 78, 87
AccB7I CCANNNNNTGG 1 cut(s) 687
AccBSI CCGCTC 1 cut(s) 944
AccII CGCG 2 cut(s) 419, 599
AciI CCGC 6 cut(s) 91, 149, 359, 397, 599, 942
AclWI GGATC 1 cut(s) 937
AcuI CTGAAG 1 cut(s) 809
AfaI GTAC 7 cut(s) 89, 269, 339, 416, 446, 845, 940
AfiI CCNNNNNNNGG 5 cut(s) 334, 382, 627, 687, 864
AflIII ACRYGT 2 cut(s) 411, 780
AgsI TTSAA 3 cut(s) 316, 409, 535
AhlI ACTAGT 1 cut(s) 229
AjnI CCWGG 5 cut(s) 61, 178, 380, 620, 708
AluBI AGCT 6 cut(s) 53, 511, 574, 604, 772, 908
AluI AGCT 6 cut(s) 53, 511, 574, 604, 772, 908
Alw21I GWGCWC 2 cut(s) 297, 606
Alw26I GTCTC 2 cut(s) 473, 645
AlwI GGATC 1 cut(s) 937
AlwNI CAGNNNCTG 1 cut(s) 677
Ama87I CYCGRG 2 cut(s) 203, 648
AoxI GGCC 2 cut(s) 741, 804
ApeKI GCWGC 4 cut(s) 581, 836, 905, 908
Asp718I GGTACC 1 cut(s) 87
AspS9I GGNCC 1 cut(s) 526
AsuC2I CCSGG 4 cut(s) 31, 40, 475, 841
AsuHPI GGTGA 3 cut(s) 77, 577, 623
AvaI CYCGRG 2 cut(s) 203, 648
AvaII GGWCC 1 cut(s) 526
BaeGI GKGCMC 1 cut(s) 649
BanI GGYRCC 2 cut(s) 78, 87
BanII GRGCYC 3 cut(s) 210, 606, 876
BarI GAAGNNNNNNTAC 2 cut(s) 42, 74
BbsI GAAGAC 1 cut(s) 713
Bbv12I GWGCWC 2 cut(s) 297, 606
BbvI GCAGC 4 cut(s) 593, 848, 895, 917
BccI CCATC 1 cut(s) 102
BceAI ACGGC 2 cut(s) 728, 791
BciT130I CCWGG 5 cut(s) 63, 180, 382, 622, 710
BclI TGATCA 1 cut(s) 810
BcnI CCSGG 4 cut(s) 31, 40, 475, 841
BcoDI GTCTC 2 cut(s) 473, 645
BcuI ACTAGT 1 cut(s) 229
BfaI CTAG 2 cut(s) 230, 429
BfmI CTRYAG 1 cut(s) 669
BfuAI ACCTGC 1 cut(s) 676
BglI GCCNNNNNGGC 1 cut(s) 160
BisI GCNGC 4 cut(s) 582, 837, 906, 909
BlsI GCNGC 4 cut(s) 583, 838, 907, 910
Bme1390I CCNGG 9 cut(s) 31, 40, 63, 180, 382, 475, 622, 710, 841
Bme18I GGWCC 1 cut(s) 526
BmeT110I CYCGRG 2 cut(s) 203, 648
BmgT120I GGNCC 1 cut(s) 526
BmiI GGNNCC 7 cut(s) 80, 89, 153, 527, 666, 763, 875
BmrFI CCNGG 9 cut(s) 31, 40, 63, 180, 382, 475, 622, 710, 841
BmsI GCATC 2 cut(s) 384, 415
BpiI GAAGAC 1 cut(s) 713
BplI GAGNNNNNCTC 1 cut(s) 928
BpmI CTGGAG 4 cut(s) 162, 533, 596, 731
Bpu10I CCTNAGC 1 cut(s) 795
BpuEI CTTGAG 1 cut(s) 899
BpuMI CCSGG 4 cut(s) 31, 40, 475, 841
BsaAI YACGTR 1 cut(s) 444
BsaJI CCNNGG 4 cut(s) 381, 561, 621, 912
BsaXI ACNNNNNCTCC 2 cut(s) 506, 536
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 382, 627, 687, 864
Bse1I ACTGG 2 cut(s) 133, 189
BseBI CCWGG 5 cut(s) 63, 180, 382, 622, 710
BseDI CCNNGG 4 cut(s) 381, 561, 621, 912
BseGI GGATG 1 cut(s) 637
BseLI CCNNNNNNNGG 5 cut(s) 334, 382, 627, 687, 864
BseMII CTCAG 2 cut(s) 809, 947
BseNI ACTGG 2 cut(s) 133, 189
BseRI GAGGAG 2 cut(s) 470, 728
BseSI GKGCMC 1 cut(s) 649
BseXI GCAGC 4 cut(s) 593, 848, 895, 917
Bsh1236I CGCG 2 cut(s) 419, 599
BshFI GGCC 2 cut(s) 743, 806
BshNI GGYRCC 2 cut(s) 78, 87
BsiHKAI GWGCWC 2 cut(s) 297, 606
BsiHKCI CYCGRG 2 cut(s) 203, 648
BsiSI CCGG 4 cut(s) 30, 39, 474, 840
BslFI GGGAC 3 cut(s) 149, 218, 539
BslI CCNNNNNNNGG 5 cut(s) 334, 382, 627, 687, 864
BsmAI GTCTC 2 cut(s) 473, 645
BsmFI GGGAC 3 cut(s) 149, 218, 539
BsnI GGCC 2 cut(s) 743, 806
BsoBI CYCGRG 2 cut(s) 203, 648
Bsp1286I GDGCHC 5 cut(s) 210, 297, 606, 649, 876
Bsp143I GATC 3 cut(s) 331, 810, 929
BspACI CCGC 6 cut(s) 91, 149, 359, 397, 599, 942
BspANI GGCC 2 cut(s) 743, 806
BspCNI CTCAG 2 cut(s) 808, 946
BspFNI CGCG 2 cut(s) 419, 599
BspHI TCATGA 2 cut(s) 813, 946
BspLI GGNNCC 7 cut(s) 80, 89, 153, 527, 666, 763, 875
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 1 cut(s) 676
BspPI GGATC 1 cut(s) 937
BspT107I GGYRCC 2 cut(s) 78, 87
BsrBI CCGCTC 1 cut(s) 944
BsrI ACTGG 2 cut(s) 133, 189
BssECI CCNNGG 4 cut(s) 381, 561, 621, 912
BssMI GATC 3 cut(s) 331, 810, 929
BssT1I CCWWGG 2 cut(s) 561, 912
Bst2UI CCWGG 5 cut(s) 63, 180, 382, 622, 710
Bst4CI ACNGT 1 cut(s) 405
Bst6I CTCTTC 2 cut(s) 68, 878
BstAPI GCANNNNNTGC 1 cut(s) 677
BstBAI YACGTR 1 cut(s) 444
BstC8I GCNNGC 2 cut(s) 306, 509
BstDEI CTNAG 4 cut(s) 156, 795, 847, 933
BstEII GGTNACC 1 cut(s) 565
BstENI CCTNNNNNAGG 2 cut(s) 332, 625
BstF5I GGATG 1 cut(s) 637
BstFNI CGCG 2 cut(s) 419, 599
BstKTI GATC 3 cut(s) 334, 813, 932
BstMAI GTCTC 2 cut(s) 473, 645
BstMBI GATC 3 cut(s) 331, 810, 929
BstMWI GCNNNNNNNGC 5 cut(s) 35, 160, 301, 425, 677
BstNI CCWGG 5 cut(s) 63, 180, 382, 622, 710
BstNSI RCATGY 1 cut(s) 784
BstPI GGTNACC 1 cut(s) 565
BstSCI CCNGG 9 cut(s) 29, 38, 61, 178, 380, 473, 620, 708, 839
BstSFI CTRYAG 1 cut(s) 669
BstSLI GKGCMC 1 cut(s) 649
BstSNI TACGTA 1 cut(s) 444
BstUI CGCG 2 cut(s) 419, 599
BstV1I GCAGC 4 cut(s) 593, 848, 895, 917
BstV2I GAAGAC 1 cut(s) 713
BstX2I RGATCY 1 cut(s) 929
BstYI RGATCY 1 cut(s) 929
BsuRI GGCC 2 cut(s) 743, 806
BtsCI GGATG 1 cut(s) 637
BtsIMutI CAGTG 2 cut(s) 126, 401
BveI ACCTGC 1 cut(s) 676
Cac8I GCNNGC 2 cut(s) 306, 509
CaiI CAGNNNCTG 1 cut(s) 677
CciI TCATGA 2 cut(s) 813, 946
Cfr13I GGNCC 1 cut(s) 526
CseI GACGC 2 cut(s) 180, 707
CsiI ACCWGGT 1 cut(s) 61
Csp6I GTAC 7 cut(s) 88, 268, 338, 415, 445, 844, 939
CviAII CATG 4 cut(s) 687, 781, 814, 947
CviQI GTAC 7 cut(s) 88, 268, 338, 415, 445, 844, 939
DdeI CTNAG 4 cut(s) 156, 795, 847, 933
DpnI GATC 3 cut(s) 333, 812, 931
DpnII GATC 3 cut(s) 331, 810, 929
Eam1104I CTCTTC 2 cut(s) 68, 878
EarI CTCTTC 2 cut(s) 68, 878
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 604
Eco105I TACGTA 1 cut(s) 444
Eco130I CCWWGG 2 cut(s) 561, 912
Eco24I GRGCYC 3 cut(s) 210, 606, 876
Eco47I GGWCC 1 cut(s) 526
Eco53kI GAGCTC 1 cut(s) 604
Eco57I CTGAAG 1 cut(s) 809
Eco88I CYCGRG 2 cut(s) 203, 648
Eco91I GGTNACC 1 cut(s) 565
EcoICRI GAGCTC 1 cut(s) 604
EcoNI CCTNNNNNAGG 2 cut(s) 332, 625
EcoO109I RGGNCCY 1 cut(s) 526
EcoO65I GGTNACC 1 cut(s) 565
EcoRII CCWGG 5 cut(s) 61, 178, 380, 620, 708
EcoT14I CCWWGG 2 cut(s) 561, 912
EcoT38I GRGCYC 3 cut(s) 210, 606, 876
ErhI CCWWGG 2 cut(s) 561, 912
FaeI CATG 4 cut(s) 690, 784, 817, 950
FaqI GGGAC 3 cut(s) 149, 218, 539
FatI CATG 4 cut(s) 686, 780, 813, 946
FauI CCCGC 1 cut(s) 366
FbaI TGATCA 1 cut(s) 810
Fnu4HI GCNGC 4 cut(s) 582, 837, 906, 909
FokI GGATG 1 cut(s) 644
FriOI GRGCYC 3 cut(s) 210, 606, 876
Fsp4HI GCNGC 4 cut(s) 582, 837, 906, 909
FspBI CTAG 2 cut(s) 230, 429
GluI GCNGC 4 cut(s) 582, 837, 906, 909
GsuI CTGGAG 4 cut(s) 162, 533, 596, 731
HaeIII GGCC 2 cut(s) 743, 806
HapII CCGG 4 cut(s) 30, 39, 474, 840
HgaI GACGC 2 cut(s) 180, 707
Hin1II CATG 4 cut(s) 690, 784, 817, 950
HindIII AAGCTT 1 cut(s) 51
HinfI GANTC 4 cut(s) 386, 548, 653, 674
HpaII CCGG 4 cut(s) 30, 39, 474, 840
HphI GGTGA 3 cut(s) 77, 577, 623
Hpy166II GTNNAC 1 cut(s) 415
Hpy188I TCNGA 3 cut(s) 99, 658, 936
Hpy188III TCNNGA 3 cut(s) 797, 814, 947
Hpy8I GTNNAC 1 cut(s) 415
Hpy99I CGWCG 1 cut(s) 196
HpyAV CCTTC 7 cut(s) 310, 496, 511, 535, 602, 784, 886
HpyCH4III ACNGT 1 cut(s) 405
HpyCH4IV ACGT 4 cut(s) 117, 138, 411, 443
HpyCH4V TGCA 1 cut(s) 671
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 160, 301, 425, 677
HpyF3I CTNAG 4 cut(s) 156, 795, 847, 933
HpySE526I ACGT 4 cut(s) 117, 138, 411, 443
Hsp92II CATG 4 cut(s) 690, 784, 817, 950
KpnI GGTACC 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 810
Kzo9I GATC 3 cut(s) 331, 810, 929
LmnI GCTCC 5 cut(s) 151, 601, 715, 879, 895
Lsp1109I GCAGC 4 cut(s) 593, 848, 895, 917
LweI GCATC 2 cut(s) 384, 415
MabI ACCWGGT 1 cut(s) 61
MaeI CTAG 2 cut(s) 230, 429
MaeII ACGT 4 cut(s) 117, 138, 411, 443
MaeIII GTNAC 4 cut(s) 118, 399, 565, 783
MalI GATC 3 cut(s) 333, 812, 931
MbiI CCGCTC 1 cut(s) 944
MboI GATC 3 cut(s) 331, 810, 929
MboII GAAGA 9 cut(s) 82, 85, 449, 482, 547, 550, 713, 895, 901
MfeI CAATTG 1 cut(s) 254
MflI RGATCY 1 cut(s) 929
MhlI GDGCHC 5 cut(s) 210, 297, 606, 649, 876
MluCI AATT 1 cut(s) 254
MlyI GAGTC 3 cut(s) 557, 647, 683
MseI TTAA 5 cut(s) 141, 449, 554, 639, 777
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 4 cut(s) 30, 39, 474, 840
MspR9I CCNGG 9 cut(s) 31, 40, 63, 180, 382, 475, 622, 710, 841
MunI CAATTG 1 cut(s) 254
MvaI CCWGG 5 cut(s) 63, 180, 382, 622, 710
MvnI CGCG 2 cut(s) 419, 599
MwoI GCNNNNNNNGC 5 cut(s) 35, 160, 301, 425, 677
NciI CCSGG 4 cut(s) 31, 40, 475, 841
NdeII GATC 3 cut(s) 331, 810, 929
NlaIII CATG 4 cut(s) 690, 784, 817, 950
NlaIV GGNNCC 7 cut(s) 80, 89, 153, 527, 666, 763, 875
NmuCI GTSAC 2 cut(s) 399, 565
NspI RCATGY 1 cut(s) 784
PagI TCATGA 2 cut(s) 813, 946
PciI ACATGT 1 cut(s) 780
PcsI WCGNNNNNNNCGW 1 cut(s) 603
PfeI GAWTC 1 cut(s) 386
PflMI CCANNNNNTGG 1 cut(s) 687
PfoI TCCNGGA 1 cut(s) 178
PkrI GCNGC 4 cut(s) 583, 838, 907, 910
PleI GAGTC 3 cut(s) 556, 647, 682
PpsI GAGTC 3 cut(s) 556, 647, 682
Ppu21I YACGTR 1 cut(s) 444
PpuMI RGGWCCY 1 cut(s) 526
PscI ACATGT 1 cut(s) 780
Psp124BI GAGCTC 1 cut(s) 606
Psp5II RGGWCCY 1 cut(s) 526
Psp6I CCWGG 5 cut(s) 61, 178, 380, 620, 708
PspEI GGTNACC 1 cut(s) 565
PspGI CCWGG 5 cut(s) 61, 178, 380, 620, 708
PspN4I GGNNCC 7 cut(s) 80, 89, 153, 527, 666, 763, 875
PspPI GGNCC 1 cut(s) 526
PspPPI RGGWCCY 1 cut(s) 526
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 1 cut(s) 677
PsuI RGATCY 1 cut(s) 929
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 7 cut(s) 89, 269, 339, 416, 446, 845, 940
RsaNI GTAC 7 cut(s) 88, 268, 338, 415, 445, 844, 939
SacI GAGCTC 1 cut(s) 606
SaqAI TTAA 5 cut(s) 141, 449, 554, 639, 777
SatI GCNGC 4 cut(s) 582, 837, 906, 909
Sau3AI GATC 3 cut(s) 331, 810, 929
Sau96I GGNCC 1 cut(s) 526
SchI GAGTC 3 cut(s) 557, 647, 683
ScrFI CCNGG 9 cut(s) 31, 40, 63, 180, 382, 475, 622, 710, 841
SduI GDGCHC 5 cut(s) 210, 297, 606, 649, 876
SexAI ACCWGGT 1 cut(s) 61
SfaNI GCATC 2 cut(s) 384, 415
SfcI CTRYAG 1 cut(s) 669
SinI GGWCC 1 cut(s) 526
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
SnaBI TACGTA 1 cut(s) 444
SpeI ACTAGT 1 cut(s) 229
Sse9I AATT 1 cut(s) 254
SsiI CCGC 6 cut(s) 91, 149, 359, 397, 599, 942
SspMI CTAG 2 cut(s) 230, 429
SstI GAGCTC 1 cut(s) 606
StyD4I CCNGG 9 cut(s) 29, 38, 61, 178, 380, 473, 620, 708, 839
StyI CCWWGG 2 cut(s) 561, 912
TaaI ACNGT 1 cut(s) 405
TaiI ACGT 4 cut(s) 120, 141, 414, 446
TaqI TCGA 2 cut(s) 330, 606
TaqII GACCGA 1 cut(s) 584
TasI AATT 1 cut(s) 254
TfiI GAWTC 1 cut(s) 386
Tru1I TTAA 5 cut(s) 141, 449, 554, 639, 777
Tru9I TTAA 5 cut(s) 141, 449, 554, 639, 777
TscAI CASTG 2 cut(s) 133, 408
TseFI GTSAC 2 cut(s) 399, 565
TseI GCWGC 4 cut(s) 581, 836, 905, 908
Tsp45I GTSAC 2 cut(s) 399, 565
TspDTI ATGAA 4 cut(s) 297, 482, 830, 867
TspGWI ACGGA 1 cut(s) 607
TspRI CASTG 2 cut(s) 133, 408
Van91I CCANNNNNTGG 1 cut(s) 687
VpaK11BI GGWCC 1 cut(s) 526
XagI CCTNNNNNAGG 2 cut(s) 332, 625
XceI RCATGY 1 cut(s) 784
XspI CTAG 2 cut(s) 230, 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.