Rmu_sc0019345.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019345.1
OG0000087
Physical Location & Seq
Forward (+)
6691 .. 7925
1235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019345.1_g000002.1.cds

Sequence Viewer

Length: 867 bp
atggacgacaaccagttgatggacatgttgatgagccagggagaagacgcccttcttattgaattcgacctggagtcaaaggctacgggtcgctccgttgaagaaaccctactggagatcattgatgaaggatacggggagcctaaccctgatgctcccatgatccaactcgagcaaacttctgccgggaatgttgtcaccatagctgatcccggaagggaaaaggtaccggtctctgtatctctctcttctcggtccgctggaagcgatgaagtcttgcttccaggtgagaagaagagatcacacaggcaccagcatagaagtgaggataagcaggaggtgaccggtctggatgtcaaagaatccgtggcgaagaggcagaagaaaaatcaaccgggacagagtcgccgctctcgcttggcatgttgtctcctgccatatcgatacaataccccgcaagagaatcgtcaccttgctcgggagtcaatgatgtgggcacttttcaatgcgtacgcgattgatgccagcgaggaagatacgcacctgaaggaggaggttagcagtctcttcgggcaggtgaagtatctgcatggggagaaggccaagttggagaaggagcgagaggatgaggtgaagagtgcccgggactctgaaaaagaagctgcagaatctgccaagttatggaaggcgagggcagatcagctggaggagcgccttcccttggagaggcacgaggccgtggaggagtacaagggctcccaacagcttattgatatgcggggacttcttgagaagaagaagaaagaccaggaggctgcagccaagtctggtgccggtggatcccagagtatcgctggcgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

288

Amino Acids

32.3

Weight (kDa)

5.2

Isoelectric Point (pI)

54.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 565
Acc36I ACCTGC 1 cut(s) 565
Acc65I GGTACC 1 cut(s) 226
AccB1I GGYRCC 3 cut(s) 226, 309, 830
AccB7I CCANNNNNTGG 2 cut(s) 19, 681
AccBSI CCGCTC 1 cut(s) 411
AccII CGCG 1 cut(s) 515
AciI CCGC 4 cut(s) 258, 409, 455, 778
AclWI GGATC 4 cut(s) 157, 203, 834, 847
AcsI RAATTY 1 cut(s) 62
AcuI CTGAAG 1 cut(s) 566
AcyI GRCGYC 1 cut(s) 48
AfaI GTAC 3 cut(s) 228, 512, 749
AfiI CCNNNNNNNGG 6 cut(s) 19, 478, 550, 681, 721, 726
AflIII ACRYGT 1 cut(s) 24
AgeI ACCGGT 2 cut(s) 229, 344
AgsI TTSAA 3 cut(s) 62, 101, 505
AhdI GACNNNNNGTC 1 cut(s) 73
AjnI CCWGG 4 cut(s) 36, 69, 283, 807
AjuI GAANNNNNNNTTGG 2 cut(s) 590, 622
AluBI AGCT 4 cut(s) 206, 662, 703, 766
AluI AGCT 4 cut(s) 206, 662, 703, 766
Alw26I GTCTC 3 cut(s) 238, 434, 569
AlwI GGATC 4 cut(s) 157, 203, 834, 847
AlwNI CAGNNNCTG 1 cut(s) 671
Ama87I CYCGRG 3 cut(s) 170, 477, 642
AoxI GGCC 2 cut(s) 600, 735
ApeKI GCWGC 3 cut(s) 662, 815, 818
ApoI RAATTY 1 cut(s) 62
AsiGI ACCGGT 2 cut(s) 229, 344
Asp718I GGTACC 1 cut(s) 226
AspLEI GCGC 1 cut(s) 714
AspS9I GGNCC 1 cut(s) 255
AsuC2I CCSGG 5 cut(s) 187, 213, 396, 643, 644
AsuHPI GGTGA 6 cut(s) 190, 299, 352, 461, 589, 643
AvaI CYCGRG 3 cut(s) 170, 477, 642
AvaII GGWCC 1 cut(s) 255
BaeGI GKGCMC 2 cut(s) 499, 643
BamHI GGATCC 1 cut(s) 839
BanI GGYRCC 3 cut(s) 226, 309, 830
BanII GRGCYC 1 cut(s) 758
BarI GAAGNNNNNNTAC 2 cut(s) 93, 125
BauI CACGAG 1 cut(s) 731
BbsI GAAGAC 1 cut(s) 51
BbvI GCAGC 3 cut(s) 649, 802, 830
BccI CCATC 1 cut(s) 13
BceAI ACGGC 1 cut(s) 722
BcgI CGANNNNNNTGC 4 cut(s) 446, 480, 550, 584
BciT130I CCWGG 4 cut(s) 38, 71, 285, 809
BciVI GTATCC 1 cut(s) 125
BcnI CCSGG 5 cut(s) 187, 213, 396, 643, 644
BcoDI GTCTC 3 cut(s) 238, 434, 569
BfmI CTRYAG 2 cut(s) 663, 816
BfoI RGCGCY 1 cut(s) 715
BfuAI ACCTGC 1 cut(s) 565
BfuI GTATCC 1 cut(s) 125
BisI GCNGC 4 cut(s) 409, 663, 816, 819
BlsI GCNGC 4 cut(s) 410, 664, 817, 820
Bme1390I CCNGG 9 cut(s) 38, 71, 187, 213, 285, 396, 643, 644, 809
Bme18I GGWCC 1 cut(s) 255
BmeRI GACNNNNNGTC 1 cut(s) 73
BmeT110I CYCGRG 3 cut(s) 170, 477, 642
BmgT120I GGNCC 1 cut(s) 255
BmiI GGNNCC 6 cut(s) 141, 228, 311, 757, 832, 841
BmrFI CCNGG 9 cut(s) 38, 71, 187, 213, 285, 396, 643, 644, 809
BmsI GCATC 2 cut(s) 142, 511
BpiI GAAGAC 1 cut(s) 51
BpmI CTGGAG 3 cut(s) 92, 134, 725
BpuEI CTTGAG 1 cut(s) 809
BpuMI CCSGG 5 cut(s) 187, 213, 396, 643, 644
Bsa29I ATCGAT 1 cut(s) 442
BsaHI GRCGYC 1 cut(s) 48
BsaI GGTCTC 1 cut(s) 238
BsaJI CCNNGG 5 cut(s) 37, 366, 642, 720, 738
BsaWI WCCGGW 2 cut(s) 229, 344
BsaXI ACNNNNNCTCC 2 cut(s) 740, 770
Bsc4I CCNNNNNNNGG 6 cut(s) 19, 478, 550, 681, 721, 726
Bse118I RCCGGY 3 cut(s) 229, 344, 833
Bse1I ACTGG 2 cut(s) 13, 117
BseBI CCWGG 4 cut(s) 38, 71, 285, 809
BseCI ATCGAT 1 cut(s) 442
BseDI CCNNGG 5 cut(s) 37, 366, 642, 720, 738
BseGI GGATG 2 cut(s) 358, 631
BseLI CCNNNNNNNGG 6 cut(s) 19, 478, 550, 681, 721, 726
BseNI ACTGG 2 cut(s) 13, 117
BseRI GAGGAG 3 cut(s) 566, 722, 758
BseSI GKGCMC 2 cut(s) 499, 643
BseXI GCAGC 3 cut(s) 649, 802, 830
Bsh1236I CGCG 1 cut(s) 515
BshFI GGCC 2 cut(s) 602, 737
BshNI GGYRCC 3 cut(s) 226, 309, 830
BshTI ACCGGT 2 cut(s) 229, 344
BshVI ATCGAT 1 cut(s) 442
BsiHKCI CYCGRG 3 cut(s) 170, 477, 642
BsiSI CCGG 7 cut(s) 186, 213, 230, 345, 395, 643, 834
BsiWI CGTACG 1 cut(s) 510
BslFI GGGAC 3 cut(s) 411, 659, 795
BslI CCNNNNNNNGG 6 cut(s) 19, 478, 550, 681, 721, 726
BsmAI GTCTC 3 cut(s) 238, 434, 569
BsmFI GGGAC 3 cut(s) 411, 659, 795
BsnI GGCC 2 cut(s) 602, 737
Bso31I GGTCTC 1 cut(s) 238
BsoBI CYCGRG 3 cut(s) 170, 477, 642
Bsp1286I GDGCHC 3 cut(s) 499, 643, 758
Bsp143I GATC 6 cut(s) 117, 162, 208, 299, 697, 839
BspACI CCGC 4 cut(s) 258, 409, 455, 778
BspANI GGCC 2 cut(s) 602, 737
BspDI ATCGAT 1 cut(s) 442
BspFNI CGCG 1 cut(s) 515
BspLI GGNNCC 6 cut(s) 141, 228, 311, 757, 832, 841
BspMAI CTGCAG 2 cut(s) 667, 820
BspMI ACCTGC 1 cut(s) 565
BspPI GGATC 4 cut(s) 157, 203, 834, 847
BspT107I GGYRCC 3 cut(s) 226, 309, 830
BspTNI GGTCTC 1 cut(s) 238
BsrBI CCGCTC 1 cut(s) 411
BsrFI RCCGGY 3 cut(s) 229, 344, 833
BsrI ACTGG 2 cut(s) 13, 117
BssAI RCCGGY 3 cut(s) 229, 344, 833
BssECI CCNNGG 5 cut(s) 37, 366, 642, 720, 738
BssMI GATC 6 cut(s) 117, 162, 208, 299, 697, 839
BssNI GRCGYC 1 cut(s) 48
BssSI CACGAG 1 cut(s) 731
BssT1I CCWWGG 1 cut(s) 720
Bst2BI CACGAG 1 cut(s) 731
Bst2UI CCWGG 4 cut(s) 38, 71, 285, 809
Bst6I CTCTTC 5 cut(s) 253, 290, 368, 572, 629
BstACI GRCGYC 1 cut(s) 48
BstAPI GCANNNNNTGC 1 cut(s) 671
BstC8I GCNNGC 3 cut(s) 526, 856, 860
BstDSI CCRYGG 2 cut(s) 366, 738
BstEII GGTNACC 1 cut(s) 340
BstENI CCTNNNNNAGG 2 cut(s) 548, 724
BstF5I GGATG 2 cut(s) 358, 631
BstFNI CGCG 1 cut(s) 515
BstH2I RGCGCY 1 cut(s) 715
BstHHI GCGC 1 cut(s) 714
BstKTI GATC 6 cut(s) 120, 165, 211, 302, 700, 842
BstMAI GTCTC 3 cut(s) 238, 434, 569
BstMBI GATC 6 cut(s) 117, 162, 208, 299, 697, 839
BstMWI GCNNNNNNNGC 4 cut(s) 414, 521, 671, 709
BstNI CCWGG 4 cut(s) 38, 71, 285, 809
BstNSI RCATGY 2 cut(s) 28, 426
BstPI GGTNACC 1 cut(s) 340
BstSCI CCNGG 9 cut(s) 36, 69, 185, 211, 283, 394, 641, 642, 807
BstSFI CTRYAG 2 cut(s) 663, 816
BstSLI GKGCMC 2 cut(s) 499, 643
BstUI CGCG 1 cut(s) 515
BstV1I GCAGC 3 cut(s) 649, 802, 830
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 1 cut(s) 839
BstYI RGATCY 1 cut(s) 839
Bsu15I ATCGAT 1 cut(s) 442
BsuI GTATCC 1 cut(s) 125
BsuRI GGCC 2 cut(s) 602, 737
BsuTUI ATCGAT 1 cut(s) 442
BtgI CCRYGG 2 cut(s) 366, 738
BtgZI GCGATG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 358, 631
BveI ACCTGC 1 cut(s) 565
Cac8I GCNNGC 3 cut(s) 526, 856, 860
CaiI CAGNNNCTG 1 cut(s) 671
CfoI GCGC 1 cut(s) 714
Cfr10I RCCGGY 3 cut(s) 229, 344, 833
Cfr13I GGNCC 1 cut(s) 255
Cfr9I CCCGGG 1 cut(s) 642
ClaI ATCGAT 1 cut(s) 442
CpoI CGGWCCG 1 cut(s) 255
CseI GACGC 1 cut(s) 56
Csp6I GTAC 3 cut(s) 227, 511, 748
CspAI ACCGGT 2 cut(s) 229, 344
CspI CGGWCCG 1 cut(s) 255
CviAII CATG 4 cut(s) 25, 160, 423, 590
CviQI GTAC 3 cut(s) 227, 511, 748
DpnI GATC 6 cut(s) 119, 164, 210, 301, 699, 841
DpnII GATC 6 cut(s) 117, 162, 208, 299, 697, 839
DriI GACNNNNNGTC 1 cut(s) 73
Eam1104I CTCTTC 5 cut(s) 253, 290, 368, 572, 629
Eam1105I GACNNNNNGTC 1 cut(s) 73
EarI CTCTTC 5 cut(s) 253, 290, 368, 572, 629
Eco130I CCWWGG 1 cut(s) 720
Eco24I GRGCYC 1 cut(s) 758
Eco31I GGTCTC 1 cut(s) 238
Eco47I GGWCC 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 566
Eco88I CYCGRG 3 cut(s) 170, 477, 642
Eco91I GGTNACC 1 cut(s) 340
EcoNI CCTNNNNNAGG 2 cut(s) 548, 724
EcoO65I GGTNACC 1 cut(s) 340
EcoRI GAATTC 1 cut(s) 62
EcoRII CCWGG 4 cut(s) 36, 69, 283, 807
EcoT14I CCWWGG 1 cut(s) 720
EcoT38I GRGCYC 1 cut(s) 758
ErhI CCWWGG 1 cut(s) 720
FaeI CATG 4 cut(s) 28, 163, 426, 593
FaiI YATR 9 cut(s) 26, 161, 203, 318, 424, 439, 591, 682, 776
FalI AAGNNNNNCTT 4 cut(s) 36, 68, 264, 296
FaqI GGGAC 3 cut(s) 411, 659, 795
FatI CATG 4 cut(s) 24, 159, 422, 589
FauI CCCGC 2 cut(s) 462, 771
Fnu4HI GCNGC 4 cut(s) 409, 663, 816, 819
FokI GGATG 2 cut(s) 365, 638
FriOI GRGCYC 1 cut(s) 758
Fsp4HI GCNGC 4 cut(s) 409, 663, 816, 819
GlaI GCGC 1 cut(s) 713
GluI GCNGC 4 cut(s) 409, 663, 816, 819
GsuI CTGGAG 3 cut(s) 92, 134, 725
HaeII RGCGCY 1 cut(s) 715
HaeIII GGCC 2 cut(s) 602, 737
HapII CCGG 7 cut(s) 186, 213, 230, 345, 395, 643, 834
HgaI GACGC 1 cut(s) 56
HhaI GCGC 1 cut(s) 714
Hin1I GRCGYC 1 cut(s) 48
Hin1II CATG 4 cut(s) 28, 163, 426, 593
Hin6I GCGC 1 cut(s) 712
HinP1I GCGC 1 cut(s) 712
HinfI GANTC 7 cut(s) 74, 362, 403, 463, 482, 647, 668
HpaII CCGG 7 cut(s) 186, 213, 230, 345, 395, 643, 834
HphI GGTGA 6 cut(s) 190, 299, 352, 461, 589, 643
Hpy188I TCNGA 1 cut(s) 652
Hpy188III TCNNGA 3 cut(s) 350, 479, 788
HpyAV CCTTC 8 cut(s) 62, 122, 210, 541, 592, 607, 679, 725
HpyCH4V TGCA 3 cut(s) 589, 665, 818
HpyF10VI GCNNNNNNNGC 4 cut(s) 414, 521, 671, 709
Hsp92I GRCGYC 1 cut(s) 48
Hsp92II CATG 4 cut(s) 28, 163, 426, 593
HspAI GCGC 1 cut(s) 712
KpnI GGTACC 1 cut(s) 230
Kzo9I GATC 6 cut(s) 117, 162, 208, 299, 697, 839
LmnI GCTCC 6 cut(s) 98, 139, 160, 616, 709, 761
Lsp1109I GCAGC 3 cut(s) 649, 802, 830
LweI GCATC 2 cut(s) 142, 511
MaeIII GTNAC 3 cut(s) 196, 340, 467
MalI GATC 6 cut(s) 119, 164, 210, 301, 699, 841
MbiI CCGCTC 1 cut(s) 411
MboI GATC 6 cut(s) 117, 162, 208, 299, 697, 839
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 3 cut(s) 499, 643, 758
MluCI AATT 1 cut(s) 62
MlyI GAGTC 4 cut(s) 83, 412, 491, 641
MmeI TCCRAC 2 cut(s) 190, 588
MslI CAYNNNNRTG 2 cut(s) 29, 321
MspA1I CMGCKG 2 cut(s) 260, 703
MspI CCGG 7 cut(s) 186, 213, 230, 345, 395, 643, 834
MspR9I CCNGG 9 cut(s) 38, 71, 187, 213, 285, 396, 643, 644, 809
MvaI CCWGG 4 cut(s) 38, 71, 285, 809
MvnI CGCG 1 cut(s) 515
MwoI GCNNNNNNNGC 4 cut(s) 414, 521, 671, 709
NciI CCSGG 5 cut(s) 187, 213, 396, 643, 644
NdeII GATC 6 cut(s) 117, 162, 208, 299, 697, 839
NlaIII CATG 4 cut(s) 28, 163, 426, 593
NlaIV GGNNCC 6 cut(s) 141, 228, 311, 757, 832, 841
NmuCI GTSAC 3 cut(s) 196, 340, 467
NspI RCATGY 2 cut(s) 28, 426
PaeR7I CTCGAG 1 cut(s) 170
PaqCI CACCTGC 1 cut(s) 565
PciI ACATGT 1 cut(s) 24
PfeI GAWTC 3 cut(s) 362, 463, 668
Pfl23II CGTACG 1 cut(s) 510
PflFI GACNNNGTC 1 cut(s) 402
PflMI CCANNNNNTGG 2 cut(s) 19, 681
PfoI TCCNGGA 1 cut(s) 211
PinAI ACCGGT 2 cut(s) 229, 344
PkrI GCNGC 4 cut(s) 410, 664, 817, 820
PleI GAGTC 4 cut(s) 82, 411, 490, 641
PpsI GAGTC 4 cut(s) 82, 411, 490, 641
PscI ACATGT 1 cut(s) 24
Psp6I CCWGG 4 cut(s) 36, 69, 283, 807
PspEI GGTNACC 1 cut(s) 340
PspGI CCWGG 4 cut(s) 36, 69, 283, 807
PspLI CGTACG 1 cut(s) 510
PspN4I GGNNCC 6 cut(s) 141, 228, 311, 757, 832, 841
PspPI GGNCC 1 cut(s) 255
PspXI VCTCGAGB 1 cut(s) 170
PstI CTGCAG 2 cut(s) 667, 820
PstNI CAGNNNCTG 1 cut(s) 671
PsuI RGATCY 1 cut(s) 839
PsyI GACNNNGTC 1 cut(s) 402
PvuII CAGCTG 1 cut(s) 703
RsaI GTAC 3 cut(s) 228, 512, 749
RsaNI GTAC 3 cut(s) 227, 511, 748
RseI CAYNNNNRTG 2 cut(s) 29, 321
Rsr2I CGGWCCG 1 cut(s) 255
RsrII CGGWCCG 1 cut(s) 255
SatI GCNGC 4 cut(s) 409, 663, 816, 819
Sau3AI GATC 6 cut(s) 117, 162, 208, 299, 697, 839
Sau96I GGNCC 1 cut(s) 255
SchI GAGTC 4 cut(s) 83, 412, 491, 641
ScrFI CCNGG 9 cut(s) 38, 71, 187, 213, 285, 396, 643, 644, 809
SduI GDGCHC 3 cut(s) 499, 643, 758
SfaNI GCATC 2 cut(s) 142, 511
SfcI CTRYAG 2 cut(s) 663, 816
Sfr274I CTCGAG 1 cut(s) 170
SinI GGWCC 1 cut(s) 255
SlaI CTCGAG 1 cut(s) 170
SmaI CCCGGG 1 cut(s) 644
SmiMI CAYNNNNRTG 2 cut(s) 29, 321
SmlI CTYRAG 2 cut(s) 170, 788
SmoI CTYRAG 2 cut(s) 170, 788
Sse9I AATT 1 cut(s) 62
SsiI CCGC 4 cut(s) 258, 409, 455, 778
StyD4I CCNGG 9 cut(s) 36, 69, 185, 211, 283, 394, 641, 642, 807
StyI CCWWGG 1 cut(s) 720
TaqI TCGA 3 cut(s) 66, 171, 442
TaqII GACCGA 1 cut(s) 243
TasI AATT 1 cut(s) 62
TatI WGTACW 1 cut(s) 747
TauI GCSGC 1 cut(s) 411
TfiI GAWTC 3 cut(s) 362, 463, 668
TseFI GTSAC 3 cut(s) 196, 340, 467
TseI GCWGC 3 cut(s) 662, 815, 818
Tsp45I GTSAC 3 cut(s) 196, 340, 467
TspDTI ATGAA 2 cut(s) 141, 285
TspGWI ACGGA 2 cut(s) 85, 355
TspMI CCCGGG 1 cut(s) 642
Tth111I GACNNNGTC 1 cut(s) 402
Van91I CCANNNNNTGG 2 cut(s) 19, 681
VpaK11BI GGWCC 1 cut(s) 255
XagI CCTNNNNNAGG 2 cut(s) 548, 724
XapI RAATTY 1 cut(s) 62
XceI RCATGY 2 cut(s) 28, 426
XcmI CCANNNNNNNNNTGG 1 cut(s) 851
XhoI CTCGAG 1 cut(s) 170
XmaI CCCGGG 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.