Rmu_sc0002082.1_g000055

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002082.1
OG0000087
Physical Location & Seq
Reverse (-)
244174 .. 246316
2143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002082.1_g000055.1.cds

Sequence Viewer

Length: 1782 bp
atgaatttctgggttttggataggctaacccttgtgcttctggttccagatatagcaagatttgaggttcccagtaccgtagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttcttccaggcaaactgaagtggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatccgcggaggccccggtagtcacagttgccattcccgagggcattcctatgccgaggtacacacttgctgacgggaccgtatgcgacgaacctaggagaagcatgacgatgaaggagatcgtagacatgcggctgaagtgggggataccggacgcagtagagcttcggcctcttagggattgggagattgtagcgaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctaccccggtgtctacagtatctgctgcggatgctgaacctgtcaccggagcagctaaccccgaatgccgttcgccaaatatacagtatgatggcaatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcgggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggtacgagttggtctattgaagagaccctgttggagataaccgatgagggatacggtgaacctgaccccgacgcccctgtggcccacgccgtgcagccctccatggccgatgtcattacgatagatgacaccggaatgggaaaagtaccggcctcagtgcctatttcctctcgttccactgggagcgatgaggcgttactccccggtgagaagaagaggtcccacaagcaccggcatcgaacagataaggaggtgacgtacactggccgggatgtccagggtactggtgcgaagaggcagaagaaagatcacccgggatcagggccgtcgccttctcttggcctgttatctcccgccgttccggtaatccccaagaagcccatcaagcagttgctgaatgaatacggggttgccgatgaaaagttcgtgcggtccatgcttggggatttgaaggatatagaccttgacagggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaagaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggtggaggtaaagaactcctgggactccgagaagaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttccagcggagaggcacgaggccgtggaggagtacaagtcctcggatgagcttatctcgatgctggctgctgcccaagataaggctgtcatcatgaagtttaaagagtgggtggcggccgggtacttagatgaggccaaattcaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcgggcaagtccggtgctagtgggtctcagagtaccaatgaagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

593

Amino Acids

65.69

Weight (kDa)

5.1

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1321
AatII GACGTC 1 cut(s) 702
Acc36I ACCTGC 1 cut(s) 1321
Acc65I GGTACC 1 cut(s) 168
AccB1I GGYRCC 1 cut(s) 168
AccBSI CCGCTC 2 cut(s) 1375, 1720
AccI GTMKAC 4 cut(s) 183, 393, 541, 702
AccII CGCG 4 cut(s) 275, 672, 674, 1450
AclWI GGATC 5 cut(s) 127, 264, 277, 1042, 1545
AcoI YGGCCR 4 cut(s) 822, 982, 1398, 1659
AcsI RAATTY 2 cut(s) 4, 1682
AcuI CTGAAG 2 cut(s) 171, 425
AcyI GRCGYC 3 cut(s) 699, 789, 1278
AdeI CACNNNGTG 1 cut(s) 808
AgeI ACCGGT 1 cut(s) 165
AgsI TTSAA 3 cut(s) 737, 1168, 1261
AhdI GACNNNNNGTC 1 cut(s) 709
AjnI CCWGG 6 cut(s) 101, 140, 993, 1212, 1469, 1698
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
AluBI AGCT 6 cut(s) 433, 505, 583, 1363, 1426, 1594
AluI AGCT 6 cut(s) 433, 505, 583, 1363, 1426, 1594
Alw26I GTCTC 5 cut(s) 734, 1232, 1510, 1700, 1758
AlwI GGATC 5 cut(s) 127, 264, 277, 1042, 1545
AlwNI CAGNNNCTG 3 cut(s) 550, 1111, 1499
Ama87I CYCGRG 4 cut(s) 305, 475, 1030, 1233
ApeKI GCWGC 8 cut(s) 490, 553, 580, 811, 1411, 1490, 1610, 1613
ApoI RAATTY 2 cut(s) 4, 1682
AsiGI ACCGGT 1 cut(s) 165
Asp718I GGTACC 1 cut(s) 168
AspA2I CCTAGG 3 cut(s) 172, 362, 706
AspLEI GCGC 3 cut(s) 490, 674, 1450
AspS9I GGNCC 8 cut(s) 207, 280, 345, 631, 799, 936, 1040, 1149
AsuHPI GGTGA 8 cut(s) 266, 564, 785, 935, 982, 1019, 1345, 1445
AvaI CYCGRG 4 cut(s) 305, 475, 1030, 1233
AvaII GGWCC 5 cut(s) 207, 345, 631, 936, 1149
AvrII CCTAGG 3 cut(s) 172, 362, 706
BaeGI GKGCMC 1 cut(s) 1255
BamHI GGATCC 1 cut(s) 269
BanI GGYRCC 1 cut(s) 168
BauI CACGAG 2 cut(s) 494, 1559
BbsI GAAGAC 1 cut(s) 126
BbvCI CCTCAGC 1 cut(s) 1443
BbvI GCAGC 8 cut(s) 477, 540, 592, 823, 1423, 1477, 1597, 1600
BccI CCATC 5 cut(s) 82, 613, 1106, 1280, 1390
BceAI ACGGC 7 cut(s) 581, 791, 1027, 1058, 1209, 1487, 1550
BcgI CGANNNNNNTGC 2 cut(s) 935, 969
BciT130I CCWGG 6 cut(s) 103, 142, 995, 1214, 1471, 1700
BciVI GTATCC 3 cut(s) 106, 408, 761
BcoDI GTCTC 5 cut(s) 734, 1232, 1510, 1700, 1758
BfaI CTAG 4 cut(s) 173, 363, 707, 1746
BfmI CTRYAG 2 cut(s) 542, 1491
BfoI RGCGCY 1 cut(s) 491
BfuAI ACCTGC 1 cut(s) 1321
BfuI GTATCC 3 cut(s) 106, 408, 761
BglI GCCNNNNNGGC 1 cut(s) 797
BlnI CCTAGG 3 cut(s) 172, 362, 706
Bme18I GGWCC 5 cut(s) 207, 345, 631, 936, 1149
BmeRI GACNNNNNGTC 1 cut(s) 709
BmeT110I CYCGRG 4 cut(s) 305, 475, 1030, 1233
BmgT120I GGNCC 8 cut(s) 207, 280, 345, 631, 799, 936, 1040, 1149
BmiI GGNNCC 9 cut(s) 45, 69, 170, 208, 271, 282, 346, 632, 938
BmrI ACTGGG 3 cut(s) 66, 225, 906
BmsI GCATC 5 cut(s) 549, 673, 961, 1236, 1593
BmuI ACTGGG 3 cut(s) 66, 225, 906
BpiI GAAGAC 1 cut(s) 126
BplI GAGNNNNNCTC 4 cut(s) 1364, 1396, 1583, 1615
BpmI CTGGAG 3 cut(s) 1385, 1553, 1721
Bpu10I CCTNAGC 1 cut(s) 1443
BpuEI CTTGAG 1 cut(s) 1448
BsaBI GATNNNNATC 1 cut(s) 1296
BsaHI GRCGYC 3 cut(s) 699, 789, 1278
BsaI GGTCTC 3 cut(s) 734, 1700, 1758
BsaWI WCCGGW 6 cut(s) 165, 418, 574, 848, 1078, 1739
BsaXI ACNNNNNCTCC 4 cut(s) 959, 989, 1565, 1595
Bse118I RCCGGY 3 cut(s) 165, 865, 948
Bse1I ACTGG 6 cut(s) 72, 130, 220, 901, 985, 1006
Bse3DI GCAATG 1 cut(s) 630
Bse8I GATNNNNATC 1 cut(s) 1296
BseBI CCWGG 6 cut(s) 103, 142, 995, 1214, 1471, 1700
BseGI GGATG 4 cut(s) 93, 564, 994, 1594
BseJI GATNNNNATC 1 cut(s) 1296
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 4 cut(s) 885, 1383, 1434, 1769
BseNI ACTGG 6 cut(s) 72, 130, 220, 901, 985, 1006
BseRI GAGGAG 2 cut(s) 1322, 1586
BseSI GKGCMC 1 cut(s) 1255
BseX3I CGGCCG 1 cut(s) 1659
BseXI GCAGC 8 cut(s) 477, 540, 592, 823, 1423, 1477, 1597, 1600
BsgI GTGCAG 3 cut(s) 476, 674, 830
Bsh1236I CGCG 4 cut(s) 275, 672, 674, 1450
Bsh1285I CGRYCG 2 cut(s) 166, 1662
BshNI GGYRCC 1 cut(s) 168
BshTI ACCGGT 1 cut(s) 165
BsiEI CGRYCG 2 cut(s) 166, 1662
BsiHKCI CYCGRG 4 cut(s) 305, 475, 1030, 1233
BslFI GGGAC 5 cut(s) 358, 644, 922, 1391, 1487
BsmAI GTCTC 5 cut(s) 734, 1232, 1510, 1700, 1758
BsmBI CGTCTC 2 cut(s) 1232, 1510
BsmFI GGGAC 5 cut(s) 358, 644, 922, 1391, 1487
BsmI GAATGC 2 cut(s) 312, 598
Bso31I GGTCTC 3 cut(s) 734, 1700, 1758
BsoBI CYCGRG 4 cut(s) 305, 475, 1030, 1233
Bsp1286I GDGCHC 1 cut(s) 1255
Bsp143I GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
Bsp19I CCATGG 1 cut(s) 819
BspCNI CTCAG 4 cut(s) 884, 1384, 1435, 1768
BspFNI CGCG 4 cut(s) 275, 672, 674, 1450
BspHI TCATGA 1 cut(s) 1635
BspLI GGNNCC 9 cut(s) 45, 69, 170, 208, 271, 282, 346, 632, 938
BspMAI CTGCAG 1 cut(s) 1495
BspMI ACCTGC 1 cut(s) 1321
BspPI GGATC 5 cut(s) 127, 264, 277, 1042, 1545
BspT107I GGYRCC 1 cut(s) 168
BspTNI GGTCTC 3 cut(s) 734, 1700, 1758
BsrBI CCGCTC 2 cut(s) 1375, 1720
BsrDI GCAATG 1 cut(s) 630
BsrFI RCCGGY 3 cut(s) 165, 865, 948
BsrI ACTGG 6 cut(s) 72, 130, 220, 901, 985, 1006
BssAI RCCGGY 3 cut(s) 165, 865, 948
BssMI GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
BssNI GRCGYC 3 cut(s) 699, 789, 1278
BssSI CACGAG 2 cut(s) 494, 1559
BssT1I CCWWGG 5 cut(s) 172, 362, 511, 706, 819
Bst2BI CACGAG 2 cut(s) 494, 1559
Bst2UI CCWGG 6 cut(s) 103, 142, 995, 1214, 1471, 1700
Bst4CI ACNGT 6 cut(s) 79, 295, 349, 546, 614, 773
Bst6I CTCTTC 4 cut(s) 732, 926, 1004, 1262
BstACI GRCGYC 3 cut(s) 699, 789, 1278
BstAPI GCANNNNNTGC 1 cut(s) 1499
BstC8I GCNNGC 5 cut(s) 641, 1251, 1282, 1608, 1732
BstDEI CTNAG 7 cut(s) 443, 871, 1392, 1407, 1443, 1669, 1755
BstDSI CCRYGG 3 cut(s) 273, 819, 1566
BstF5I GGATG 4 cut(s) 93, 564, 994, 1594
BstFNI CGCG 4 cut(s) 275, 672, 674, 1450
BstH2I RGCGCY 1 cut(s) 491
BstHHI GCGC 3 cut(s) 490, 674, 1450
BstKTI GATC 7 cut(s) 122, 272, 390, 1027, 1037, 1540, 1774
BstMAI GTCTC 5 cut(s) 734, 1232, 1510, 1700, 1758
BstMBI GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
BstMCI CGRYCG 2 cut(s) 166, 1662
BstMWI GCNNNNNNNGC 9 cut(s) 470, 559, 649, 797, 1102, 1153, 1277, 1397, 1499
BstNI CCWGG 6 cut(s) 103, 142, 995, 1214, 1471, 1700
BstNSI RCATGY 1 cut(s) 400
BstSFI CTRYAG 2 cut(s) 542, 1491
BstSLI GKGCMC 1 cut(s) 1255
BstUI CGCG 4 cut(s) 275, 672, 674, 1450
BstV1I GCAGC 8 cut(s) 477, 540, 592, 823, 1423, 1477, 1597, 1600
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 269
BstXI CCANNNNNNTGG 1 cut(s) 1001
BstYI RGATCY 1 cut(s) 269
BstZI CGGCCG 1 cut(s) 1659
BsuI GTATCC 3 cut(s) 106, 408, 761
BtgI CCRYGG 3 cut(s) 273, 819, 1566
BtgZI GCGATG 1 cut(s) 918
BtsCI GGATG 4 cut(s) 93, 564, 994, 1594
BtsIMutI CAGTG 3 cut(s) 879, 894, 978
BveI ACCTGC 1 cut(s) 1321
Cac8I GCNNGC 5 cut(s) 641, 1251, 1282, 1608, 1732
CaiI CAGNNNCTG 3 cut(s) 550, 1111, 1499
CciI TCATGA 1 cut(s) 1635
CfoI GCGC 3 cut(s) 490, 674, 1450
Cfr10I RCCGGY 3 cut(s) 165, 865, 948
Cfr13I GGNCC 8 cut(s) 207, 280, 345, 631, 799, 936, 1040, 1149
Cfr42I CCGCGG 1 cut(s) 276
Cfr9I CCCGGG 3 cut(s) 475, 1030, 1233
CseI GACGC 3 cut(s) 431, 797, 1286
CspAI ACCGGT 1 cut(s) 165
CviAII CATG 7 cut(s) 373, 397, 820, 1153, 1346, 1509, 1636
DdeI CTNAG 7 cut(s) 443, 871, 1392, 1407, 1443, 1669, 1755
DpnI GATC 7 cut(s) 121, 271, 389, 1026, 1036, 1539, 1773
DpnII GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
DraI TTTAAA 1 cut(s) 1645
DraIII CACNNNGTG 1 cut(s) 808
DriI GACNNNNNGTC 1 cut(s) 709
EaeI YGGCCR 4 cut(s) 822, 982, 1398, 1659
EagI CGGCCG 1 cut(s) 1659
Eam1104I CTCTTC 4 cut(s) 732, 926, 1004, 1262
Eam1105I GACNNNNNGTC 1 cut(s) 709
EarI CTCTTC 4 cut(s) 732, 926, 1004, 1262
EclXI CGGCCG 1 cut(s) 1659
Eco130I CCWWGG 5 cut(s) 172, 362, 511, 706, 819
Eco31I GGTCTC 3 cut(s) 734, 1700, 1758
Eco47I GGWCC 5 cut(s) 207, 345, 631, 936, 1149
Eco52I CGGCCG 1 cut(s) 1659
Eco57I CTGAAG 2 cut(s) 171, 425
Eco88I CYCGRG 4 cut(s) 305, 475, 1030, 1233
EcoO109I RGGNCCY 4 cut(s) 207, 280, 631, 936
EcoRII CCWGG 6 cut(s) 101, 140, 993, 1212, 1469, 1698
EcoT14I CCWWGG 5 cut(s) 172, 362, 511, 706, 819
ErhI CCWWGG 5 cut(s) 172, 362, 511, 706, 819
Esp3I CGTCTC 2 cut(s) 1232, 1510
FaeI CATG 7 cut(s) 376, 400, 823, 1156, 1349, 1512, 1639
FaqI GGGAC 5 cut(s) 358, 644, 922, 1391, 1487
FatI CATG 7 cut(s) 372, 396, 819, 1152, 1345, 1508, 1635
FauI CCCGC 8 cut(s) 667, 1078, 1242, 1368, 1443, 1683, 1713, 1723
FblI GTMKAC 4 cut(s) 183, 393, 541, 702
FokI GGATG 4 cut(s) 100, 571, 1001, 1601
FspBI CTAG 4 cut(s) 173, 363, 707, 1746
GlaI GCGC 3 cut(s) 489, 673, 1449
GsuI CTGGAG 3 cut(s) 1385, 1553, 1721
HaeII RGCGCY 1 cut(s) 491
HgaI GACGC 3 cut(s) 431, 797, 1286
HhaI GCGC 3 cut(s) 490, 674, 1450
Hin1I GRCGYC 3 cut(s) 699, 789, 1278
Hin1II CATG 7 cut(s) 376, 400, 823, 1156, 1349, 1512, 1639
Hin6I GCGC 3 cut(s) 488, 672, 1448
HinP1I GCGC 3 cut(s) 488, 672, 1448
HincII GTYRAC 1 cut(s) 703
HindII GTYRAC 1 cut(s) 703
HphI GGTGA 8 cut(s) 266, 564, 785, 935, 982, 1019, 1345, 1445
Hpy166II GTNNAC 9 cut(s) 157, 184, 330, 394, 542, 703, 776, 978, 1267
Hpy188I TCNGA 7 cut(s) 97, 229, 247, 1302, 1480, 1588, 1758
Hpy188III TCNNGA 5 cut(s) 47, 305, 1532, 1600, 1636
Hpy8I GTNNAC 9 cut(s) 157, 184, 330, 394, 542, 703, 776, 978, 1267
Hpy99I CGWCG 8 cut(s) 127, 251, 359, 701, 704, 791, 1048, 1280
HpyCH4III ACNGT 6 cut(s) 79, 295, 349, 546, 614, 773
HpyCH4IV ACGT 2 cut(s) 699, 974
HpyCH4V TGCA 4 cut(s) 493, 691, 811, 1493
HpyF10VI GCNNNNNNNGC 9 cut(s) 470, 559, 649, 797, 1102, 1153, 1277, 1397, 1499
HpyF3I CTNAG 7 cut(s) 443, 871, 1392, 1407, 1443, 1669, 1755
HpySE526I ACGT 2 cut(s) 699, 974
Hsp92I GRCGYC 3 cut(s) 699, 789, 1278
Hsp92II CATG 7 cut(s) 376, 400, 823, 1156, 1349, 1512, 1639
HspAI GCGC 3 cut(s) 488, 672, 1448
KpnI GGTACC 1 cut(s) 172
KspI CCGCGG 1 cut(s) 276
Kzo9I GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
LmnI GCTCC 6 cut(s) 510, 577, 900, 1372, 1423, 1717
Lsp1109I GCAGC 8 cut(s) 477, 540, 592, 823, 1423, 1477, 1597, 1600
LweI GCATC 5 cut(s) 549, 673, 961, 1236, 1593
MaeI CTAG 4 cut(s) 173, 363, 707, 1746
MaeII ACGT 2 cut(s) 699, 974
MaeIII GTNAC 4 cut(s) 289, 570, 912, 970
MalI GATC 7 cut(s) 121, 271, 389, 1026, 1036, 1539, 1773
MbiI CCGCTC 2 cut(s) 1375, 1720
MboI GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
MflI RGATCY 1 cut(s) 269
MhlI GDGCHC 1 cut(s) 1255
MluCI AATT 3 cut(s) 4, 188, 1682
MlyI GAGTC 5 cut(s) 251, 1373, 1469, 1505, 1520
MmeI TCCRAC 2 cut(s) 270, 729
MseI TTAA 1 cut(s) 1644
MslI CAYNNNNRTG 3 cut(s) 317, 377, 851
MspA1I CMGCKG 3 cut(s) 275, 1414, 1550
Mva1269I GAATGC 2 cut(s) 312, 598
MvaI CCWGG 6 cut(s) 103, 142, 995, 1214, 1471, 1700
MvnI CGCG 4 cut(s) 275, 672, 674, 1450
MwoI GCNNNNNNNGC 9 cut(s) 470, 559, 649, 797, 1102, 1153, 1277, 1397, 1499
NcoI CCATGG 1 cut(s) 819
NdeII GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
NlaIII CATG 7 cut(s) 376, 400, 823, 1156, 1349, 1512, 1639
NlaIV GGNNCC 9 cut(s) 45, 69, 170, 208, 271, 282, 346, 632, 938
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 3 cut(s) 289, 570, 970
NspI RCATGY 1 cut(s) 400
PagI TCATGA 1 cut(s) 1635
PaqCI CACCTGC 1 cut(s) 1321
PcsI WCGNNNNNNNCGW 5 cut(s) 122, 209, 719, 1128, 1281
PctI GAATGC 2 cut(s) 312, 598
PfeI GAWTC 5 cut(s) 92, 466, 499, 1219, 1238
PfoI TCCNGGA 1 cut(s) 1698
PinAI ACCGGT 1 cut(s) 165
PleI GAGTC 5 cut(s) 250, 1373, 1469, 1504, 1520
PpsI GAGTC 5 cut(s) 250, 1373, 1469, 1504, 1520
PpuMI RGGWCCY 3 cut(s) 207, 631, 936
Psp5II RGGWCCY 3 cut(s) 207, 631, 936
Psp6I CCWGG 6 cut(s) 101, 140, 993, 1212, 1469, 1698
PspGI CCWGG 6 cut(s) 101, 140, 993, 1212, 1469, 1698
PspN4I GGNNCC 9 cut(s) 45, 69, 170, 208, 271, 282, 346, 632, 938
PspPI GGNCC 8 cut(s) 207, 280, 345, 631, 799, 936, 1040, 1149
PspPPI RGGWCCY 3 cut(s) 207, 631, 936
PstI CTGCAG 1 cut(s) 1495
PstNI CAGNNNCTG 3 cut(s) 550, 1111, 1499
PsuI RGATCY 1 cut(s) 269
RseI CAYNNNNRTG 3 cut(s) 317, 377, 851
SacII CCGCGG 1 cut(s) 276
SalI GTCGAC 1 cut(s) 701
SaqAI TTAA 1 cut(s) 1644
Sau3AI GATC 7 cut(s) 119, 269, 387, 1024, 1034, 1537, 1771
Sau96I GGNCC 8 cut(s) 207, 280, 345, 631, 799, 936, 1040, 1149
SchI GAGTC 5 cut(s) 251, 1373, 1469, 1505, 1520
SduI GDGCHC 1 cut(s) 1255
SfaNI GCATC 5 cut(s) 549, 673, 961, 1236, 1593
SfcI CTRYAG 2 cut(s) 542, 1491
Sfr303I CCGCGG 1 cut(s) 276
SgrBI CCGCGG 1 cut(s) 276
SinI GGWCC 5 cut(s) 207, 345, 631, 936, 1149
SmaI CCCGGG 3 cut(s) 477, 1032, 1235
SmiMI CAYNNNNRTG 3 cut(s) 317, 377, 851
SmlI CTYRAG 1 cut(s) 1427
SmoI CTYRAG 1 cut(s) 1427
Sse9I AATT 3 cut(s) 4, 188, 1682
SspMI CTAG 4 cut(s) 173, 363, 707, 1746
StyI CCWWGG 5 cut(s) 172, 362, 511, 706, 819
TaaI ACNGT 6 cut(s) 79, 295, 349, 546, 614, 773
TaiI ACGT 2 cut(s) 702, 977
TaqI TCGA 9 cut(s) 162, 212, 696, 702, 713, 955, 1192, 1275, 1601
TasI AATT 3 cut(s) 4, 188, 1682
TatI WGTACW 1 cut(s) 1575
TauI GCSGC 4 cut(s) 403, 1403, 1661, 1730
TfiI GAWTC 5 cut(s) 92, 466, 499, 1219, 1238
Tru1I TTAA 1 cut(s) 1644
Tru9I TTAA 1 cut(s) 1644
TscAI CASTG 3 cut(s) 879, 901, 985
TseFI GTSAC 3 cut(s) 289, 570, 970
TseI GCWGC 8 cut(s) 490, 553, 580, 811, 1411, 1490, 1610, 1613
Tsp45I GTSAC 3 cut(s) 289, 570, 970
TspDTI ATGAA 7 cut(s) 17, 395, 1131, 1149, 1334, 1652, 1782
TspMI CCCGGG 3 cut(s) 475, 1030, 1233
TspRI CASTG 3 cut(s) 879, 901, 985
VpaK11BI GGWCC 5 cut(s) 207, 345, 631, 936, 1149
XapI RAATTY 2 cut(s) 4, 1682
XceI RCATGY 1 cut(s) 400
XmaI CCCGGG 3 cut(s) 475, 1030, 1233
XmaJI CCTAGG 3 cut(s) 172, 362, 706
XmiI GTMKAC 4 cut(s) 183, 393, 541, 702
XspI CTAG 4 cut(s) 173, 363, 707, 1746
ZraI GACGTC 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.