Rmu_ssc0000371.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000371.1
OG0000087
Physical Location & Seq
Forward (+)
79021 .. 82331
3311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000371.1_g000021.1.cds

Sequence Viewer

Length: 2661 bp
atgtgtagcgatcctatggctgagggcttttcggtttcgacggccctgatgcactggagattgaatttaagagggaaaccgactgttttccctcacattcgtgaaaaagaagctcagaagacttggaagatttgcagcgaggagaaagggagagccaagggagaagtgggcgtgcctgtggagctaacccttgtgcttctggttccagatatagcaagatttgaggtccccagtaccgtagttagtatggaatcagaagccaggggtggggatacgggatcgtcataccagtcttctgccaagcaagctgaggtagatatcgacctgtacttagcccgggtagatcaattagcagagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccaacgagggggagagcgagggtggatccgcggaggccccggtagtcacagtggccattcccaagggtattccgaagccgaggtacacacttgcggacgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgcgactaaagtgggggataccggacgcggtggaacttaggcctcttagggatggagagatggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcaattccaccaagggttatcgctaccgctgccccggtgcctacagtatctgctgcggatgctgaacctatcaccggggcagctgaccccgaatgctattcgccagatatacagtatgatggctatgtgggacttgtgccaacaagggtggccttccgtaaacgagttctgcccggtacatcgggtactgtactcaaggaagcagtcttgtgcgggtacagttaccttcgctgctagggattacgagccactagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatacgccgtttggtcagagaaagagaggagctcttatagattcatccggcactctacactttataggctagggctagggtggctccccgtgaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacagaatggatgatgaccaactgatggatatgctgatgggcccgagagaagacgccctccacatcgacgtcgacctagggtcgaagggtacgagtcgcggcccgagagaagacgccctccacatcgacgtcgacctagggtcgaagggtacgagtcggtcaattgaagaaacccttctggagatcaccgacgagggatatggtgaacctgaccccgacgcgcctgtgacccacgtcgcgcagccctccatggccaatgttataaggatagatgacaccgggatgggaaaagtaccggccccggtgcctatctcctctcgttccactaggagcgatgaggctctactcccctgtgagaagaagagatcccataggcaccggcatcgaactgataaggaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcaccttctcttgtcctgttatctcctgccattccggtaatccccaagaagcccatcaagcagctgctgtgtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgggacaaggataatactccccaagagaatcgccgtctttcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgatgccagcgaggaggatactcatctgaaggaggaggttagcaatctctccaggcaggtgaagtatctgcatggcgagaaggccaagctggagaaggagcgggacgcattgagggcggagctggccgccgctaagcagcggatcgtggggcttgagggcgaagttgctgagccccgggaagaggtaaaaaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagaccatctggaggattgtcttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatctttatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatatttagatgaagctaaggcccgggaagaggtaaaaaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagaccacctggaggattgtcttcccgcagagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatctctatgctggctgctgcccaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatatttagatgaagctaaattcaggcggggtcttctggagaaaaagaagaaggatcgggaggcggcggccaagtctggtgccggtgggtctcagagtaccggtggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

886

Amino Acids

99.09

Weight (kDa)

6.13

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1475
AarI CACCTGC 1 cut(s) 1963
AatII GACGTC 2 cut(s) 1284, 1344
Acc36I ACCTGC 1 cut(s) 1963
Acc65I GGTACC 1 cut(s) 1013
AccB1I GGYRCC 5 cut(s) 696, 1013, 1516, 1587, 2621
AccB7I CCANNNNNTGG 1 cut(s) 1237
AccBSI CCGCTC 1 cut(s) 2017
AccI GTMKAC 3 cut(s) 1083, 1284, 1344
AccII CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
AclWI GGATC 8 cut(s) 5, 286, 423, 436, 1572, 1812, 2066, 2604
AcoI YGGCCR 8 cut(s) 456, 618, 1464, 1624, 2040, 2301, 2538, 2610
AcsI RAATTY 2 cut(s) 64, 2561
AcuI CTGAAG 2 cut(s) 1829, 1964
AcyI GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
AgeI ACCGGT 2 cut(s) 1010, 2642
AgsI TTSAA 5 cut(s) 64, 1379, 1903, 2287, 2524
AhdI GACNNNNNGTC 2 cut(s) 1291, 1351
AhlI ACTAGT 1 cut(s) 910
AjiI CACGTC 1 cut(s) 1447
AjnI CCWGG 3 cut(s) 260, 1967, 2409
AleI CACNNNNGTG 1 cut(s) 99
AloI GAACNNNNNNTCC 2 cut(s) 350, 382
Alw21I GWGCWC 3 cut(s) 1115, 2238, 2475
Alw26I GTCTC 3 cut(s) 2152, 2389, 2637
AlwI GGATC 8 cut(s) 5, 286, 423, 436, 1572, 1812, 2066, 2604
AlwNI CAGNNNCTG 4 cut(s) 709, 1753, 2141, 2378
ApaI GGGCCC 1 cut(s) 1256
ApoI RAATTY 2 cut(s) 64, 2561
AsiGI ACCGGT 2 cut(s) 1010, 2642
Asp700I GAANNNNTTC 2 cut(s) 662, 1386
Asp718I GGTACC 1 cut(s) 1013
AspA2I CCTAGG 2 cut(s) 1288, 1348
AspLEI GCGC 4 cut(s) 649, 1180, 1435, 1453
AsuHPI GGTGA 7 cut(s) 723, 1390, 1427, 1624, 1661, 1680, 1987
AvaII GGWCC 6 cut(s) 226, 366, 504, 1033, 1676, 1791
AvrII CCTAGG 2 cut(s) 1288, 1348
BaeGI GKGCMC 2 cut(s) 1256, 1897
BalI TGGCCA 2 cut(s) 458, 1466
BamHI GGATCC 1 cut(s) 428
BanI GGYRCC 5 cut(s) 696, 1013, 1516, 1587, 2621
BanII GRGCYC 5 cut(s) 1115, 1256, 2091, 2238, 2475
BarI GAAGNNNNNNTAC 2 cut(s) 470, 502
BauI CACGAG 3 cut(s) 653, 2201, 2438
BbsI GAAGAC 7 cut(s) 125, 285, 1269, 1329, 2177, 2414, 2567
Bbv12I GWGCWC 3 cut(s) 1115, 2238, 2475
BbvCI CCTCAGC 2 cut(s) 21, 309
BccI CCATC 8 cut(s) 602, 610, 772, 1231, 1243, 1489, 1748, 2178
BceAI ACGGC 7 cut(s) 57, 1073, 1851, 2129, 2192, 2366, 2429
BcgI CGANNNNNNTGC 2 cut(s) 1577, 1611
BciT130I CCWGG 3 cut(s) 262, 1969, 2411
BciVI GTATCC 3 cut(s) 265, 567, 1927
BcoDI GTCTC 3 cut(s) 2152, 2389, 2637
BcuI ACTAGT 1 cut(s) 910
BfaI CTAG 8 cut(s) 894, 911, 965, 1151, 1157, 1289, 1349, 1539
BfmI CTRYAG 3 cut(s) 701, 2133, 2370
BfoI RGCGCY 2 cut(s) 650, 1181
BfuAI ACCTGC 1 cut(s) 1963
BfuI GTATCC 3 cut(s) 265, 567, 1927
BlnI CCTAGG 2 cut(s) 1288, 1348
BlpI GCTNAGC 2 cut(s) 2049, 2085
Bme18I GGWCC 6 cut(s) 226, 366, 504, 1033, 1676, 1791
BmeRI GACNNNNNGTC 2 cut(s) 1291, 1351
BmgBI CACGTC 1 cut(s) 1447
BmrI ACTGGG 2 cut(s) 225, 384
BmsI GCATC 5 cut(s) 39, 708, 1603, 1878, 1909
BmuI ACTGGG 2 cut(s) 225, 384
BoxI GACNNNNGTC 2 cut(s) 1445, 1681
BpiI GAAGAC 7 cut(s) 125, 285, 1269, 1329, 2177, 2414, 2567
BplI GAGNNNNNCTC 4 cut(s) 1097, 1129, 2462, 2494
BpmI CTGGAG 7 cut(s) 76, 1412, 1951, 2027, 2195, 2432, 2600
Bpu10I CCTNAGC 3 cut(s) 21, 309, 2322
Bpu1102I GCTNAGC 2 cut(s) 2049, 2085
BpuEI CTTGAG 2 cut(s) 838, 2090
BsaBI GATNNNNATC 1 cut(s) 1938
BsaHI GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
BsaI GGTCTC 1 cut(s) 2637
BsaWI WCCGGW 4 cut(s) 577, 1010, 1720, 2642
BsaXI ACNNNNNCTCC 6 cut(s) 1601, 1631, 2207, 2237, 2444, 2474
Bse118I RCCGGY 5 cut(s) 1010, 1507, 1590, 2624, 2642
Bse1I ACTGG 7 cut(s) 59, 231, 289, 379, 1036, 1627, 1648
Bse8I GATNNNNATC 1 cut(s) 1938
BseBI CCWGG 3 cut(s) 262, 1969, 2411
BseGI GGATG 6 cut(s) 613, 723, 1125, 1228, 1500, 1636
BseJI GATNNNNATC 1 cut(s) 1938
BseMII CTCAG 5 cut(s) 12, 128, 300, 2076, 2648
BseNI ACTGG 7 cut(s) 59, 231, 289, 379, 1036, 1627, 1648
BseRI GAGGAG 9 cut(s) 155, 413, 1123, 1223, 1516, 1943, 1964, 2228, 2465
BseSI GKGCMC 2 cut(s) 1256, 1897
BseX3I CGGCCG 2 cut(s) 2301, 2538
BseYI CCCAGC 1 cut(s) 968
BsgI GTGCAG 1 cut(s) 635
Bsh1236I CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
Bsh1285I CGRYCG 4 cut(s) 1828, 2304, 2541, 2653
BshNI GGYRCC 5 cut(s) 696, 1013, 1516, 1587, 2621
BshTI ACCGGT 2 cut(s) 1010, 2642
BsiEI CGRYCG 4 cut(s) 1828, 2304, 2541, 2653
BsiHKAI GWGCWC 3 cut(s) 1115, 2238, 2475
BslFI GGGAC 9 cut(s) 212, 517, 803, 1046, 1689, 1850, 2033, 2129, 2366
BsmAI GTCTC 3 cut(s) 2152, 2389, 2637
BsmBI CGTCTC 2 cut(s) 2152, 2389
BsmFI GGGAC 9 cut(s) 212, 517, 803, 1046, 1689, 1850, 2033, 2129, 2366
BsmI GAATGC 1 cut(s) 757
Bso31I GGTCTC 1 cut(s) 2637
Bsp120I GGGCCC 1 cut(s) 1252
Bsp1286I GDGCHC 6 cut(s) 1115, 1256, 1897, 2091, 2238, 2475
Bsp1720I GCTNAGC 2 cut(s) 2049, 2085
Bsp19I CCATGG 1 cut(s) 1461
BspCNI CTCAG 5 cut(s) 13, 127, 301, 2077, 2647
BspFNI CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
BspHI TCATGA 2 cut(s) 2277, 2514
BspMAI CTGCAG 2 cut(s) 2137, 2374
BspMI ACCTGC 1 cut(s) 1963
BspPI GGATC 8 cut(s) 5, 286, 423, 436, 1572, 1812, 2066, 2604
BspQI GCTCTTC 2 cut(s) 2226, 2463
BspT107I GGYRCC 5 cut(s) 696, 1013, 1516, 1587, 2621
BspTNI GGTCTC 1 cut(s) 2637
BsrBI CCGCTC 1 cut(s) 2017
BsrFI RCCGGY 5 cut(s) 1010, 1507, 1590, 2624, 2642
BsrI ACTGG 7 cut(s) 59, 231, 289, 379, 1036, 1627, 1648
BssAI RCCGGY 5 cut(s) 1010, 1507, 1590, 2624, 2642
BssNAI GTATAC 1 cut(s) 1084
BssNI GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
BssSI CACGAG 3 cut(s) 653, 2201, 2438
BssT1I CCWWGG 7 cut(s) 156, 465, 670, 1288, 1348, 1461, 1636
Bst1107I GTATAC 1 cut(s) 1084
Bst2BI CACGAG 3 cut(s) 653, 2201, 2438
Bst2UI CCWGG 3 cut(s) 262, 1969, 2411
Bst4CI ACNGT 8 cut(s) 85, 238, 454, 508, 705, 773, 849, 880
Bst6I CTCTTC 9 cut(s) 1061, 1178, 1568, 1646, 1904, 2091, 2226, 2328, 2463
BstACI GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
BstAPI GCANNNNNTGC 3 cut(s) 629, 2141, 2378
BstC8I GCNNGC 7 cut(s) 173, 306, 1893, 1924, 2040, 2250, 2487
BstDSI CCRYGG 5 cut(s) 432, 1461, 2190, 2208, 2445
BstF5I GGATG 6 cut(s) 613, 723, 1125, 1228, 1500, 1636
BstFNI CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
BstH2I RGCGCY 2 cut(s) 650, 1181
BstHHI GCGC 4 cut(s) 649, 1180, 1435, 1453
BstMAI GTCTC 3 cut(s) 2152, 2389, 2637
BstMCI CGRYCG 4 cut(s) 1828, 2304, 2541, 2653
BstNI CCWGG 3 cut(s) 262, 1969, 2411
BstNSI RCATGY 1 cut(s) 559
BstPAI GACNNNNGTC 2 cut(s) 1445, 1681
BstSFI CTRYAG 3 cut(s) 701, 2133, 2370
BstSLI GKGCMC 2 cut(s) 1256, 1897
BstUI CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
BstV2I GAAGAC 7 cut(s) 125, 285, 1269, 1329, 2177, 2414, 2567
BstX2I RGATCY 3 cut(s) 428, 1577, 1804
BstXI CCANNNNNNTGG 1 cut(s) 1643
BstYI RGATCY 3 cut(s) 428, 1577, 1804
BstZ17I GTATAC 1 cut(s) 1084
BstZI CGGCCG 2 cut(s) 2301, 2538
BsuI GTATCC 3 cut(s) 265, 567, 1927
BtgI CCRYGG 5 cut(s) 432, 1461, 2190, 2208, 2445
BtgZI GCGATG 1 cut(s) 1560
BtrI CACGTC 1 cut(s) 1447
BtsCI GGATG 6 cut(s) 613, 723, 1125, 1228, 1500, 1636
BtsIMutI CAGTG 3 cut(s) 52, 459, 1620
BveI ACCTGC 1 cut(s) 1963
Cac8I GCNNGC 7 cut(s) 173, 306, 1893, 1924, 2040, 2250, 2487
CaiI CAGNNNCTG 4 cut(s) 709, 1753, 2141, 2378
CciI TCATGA 2 cut(s) 2277, 2514
CfoI GCGC 4 cut(s) 649, 1180, 1435, 1453
Cfr10I RCCGGY 5 cut(s) 1010, 1507, 1590, 2624, 2642
Cfr42I CCGCGG 2 cut(s) 435, 2193
CseI GACGC 5 cut(s) 590, 1274, 1334, 1439, 2030
CspAI ACCGGT 2 cut(s) 1010, 2642
CspCI CAANNNNNGTGG 2 cut(s) 788, 823
CviAII CATG 8 cut(s) 556, 1462, 1795, 1988, 2151, 2278, 2388, 2515
DriI GACNNNNNGTC 2 cut(s) 1291, 1351
EaeI YGGCCR 8 cut(s) 456, 618, 1464, 1624, 2040, 2301, 2538, 2610
EagI CGGCCG 2 cut(s) 2301, 2538
Eam1104I CTCTTC 9 cut(s) 1061, 1178, 1568, 1646, 1904, 2091, 2226, 2328, 2463
Eam1105I GACNNNNNGTC 2 cut(s) 1291, 1351
EarI CTCTTC 9 cut(s) 1061, 1178, 1568, 1646, 1904, 2091, 2226, 2328, 2463
EciI GGCGGA 1 cut(s) 2048
Ecl136II GAGCTC 3 cut(s) 1113, 2236, 2473
EclXI CGGCCG 2 cut(s) 2301, 2538
Eco130I CCWWGG 7 cut(s) 156, 465, 670, 1288, 1348, 1461, 1636
Eco147I AGGCCT 1 cut(s) 598
Eco24I GRGCYC 5 cut(s) 1115, 1256, 2091, 2238, 2475
Eco31I GGTCTC 1 cut(s) 2637
Eco32I GATATC 2 cut(s) 319, 1816
Eco47I GGWCC 6 cut(s) 226, 366, 504, 1033, 1676, 1791
Eco52I CGGCCG 2 cut(s) 2301, 2538
Eco53kI GAGCTC 3 cut(s) 1113, 2236, 2473
Eco57I CTGAAG 2 cut(s) 1829, 1964
EcoICRI GAGCTC 3 cut(s) 1113, 2236, 2473
EcoO109I RGGNCCY 3 cut(s) 226, 366, 439
EcoRII CCWGG 3 cut(s) 260, 1967, 2409
EcoRV GATATC 2 cut(s) 319, 1816
EcoT14I CCWWGG 7 cut(s) 156, 465, 670, 1288, 1348, 1461, 1636
EcoT38I GRGCYC 5 cut(s) 1115, 1256, 2091, 2238, 2475
ErhI CCWWGG 7 cut(s) 156, 465, 670, 1288, 1348, 1461, 1636
Esp3I CGTCTC 2 cut(s) 2152, 2389
FaeI CATG 8 cut(s) 559, 1465, 1798, 1991, 2154, 2281, 2391, 2518
FalI AAGNNNNNCTT 2 cut(s) 1371, 1403
FaqI GGGAC 9 cut(s) 212, 517, 803, 1046, 1689, 1850, 2033, 2129, 2366
FatI CATG 8 cut(s) 555, 1461, 1794, 1987, 2150, 2277, 2387, 2514
FauI CCCGC 6 cut(s) 865, 1884, 2010, 2197, 2434, 2562
FblI GTMKAC 3 cut(s) 1083, 1284, 1344
FokI GGATG 6 cut(s) 620, 730, 1112, 1235, 1507, 1643
FriOI GRGCYC 5 cut(s) 1115, 1256, 2091, 2238, 2475
FspBI CTAG 8 cut(s) 894, 911, 965, 1151, 1157, 1289, 1349, 1539
GlaI GCGC 4 cut(s) 648, 1179, 1434, 1452
GsaI CCCAGC 1 cut(s) 972
GsuI CTGGAG 7 cut(s) 76, 1412, 1951, 2027, 2195, 2432, 2600
HaeII RGCGCY 2 cut(s) 650, 1181
HgaI GACGC 5 cut(s) 590, 1274, 1334, 1439, 2030
HhaI GCGC 4 cut(s) 649, 1180, 1435, 1453
Hin1I GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
Hin1II CATG 8 cut(s) 559, 1465, 1798, 1991, 2154, 2281, 2391, 2518
Hin6I GCGC 4 cut(s) 647, 1178, 1433, 1451
HinP1I GCGC 4 cut(s) 647, 1178, 1433, 1451
HincII GTYRAC 2 cut(s) 1285, 1345
HindII GTYRAC 2 cut(s) 1285, 1345
HphI GGTGA 7 cut(s) 723, 1390, 1427, 1624, 1661, 1680, 1987
Hpy166II GTNNAC 8 cut(s) 489, 820, 1084, 1285, 1345, 1418, 1620, 1909
Hpy188III TCNNGA 9 cut(s) 101, 206, 1391, 1835, 2174, 2278, 2515, 2579, 2600
Hpy8I GTNNAC 8 cut(s) 489, 820, 1084, 1285, 1345, 1418, 1620, 1909
Hpy99I CGWCG 9 cut(s) 43, 518, 1283, 1286, 1343, 1346, 1406, 1433, 1451
HpyCH4III ACNGT 8 cut(s) 85, 238, 454, 508, 705, 773, 849, 880
HpyCH4IV ACGT 4 cut(s) 1281, 1341, 1446, 1616
HpyCH4V TGCA 6 cut(s) 52, 135, 652, 1987, 2135, 2372
HpySE526I ACGT 4 cut(s) 1281, 1341, 1446, 1616
Hsp92I GRCGYC 4 cut(s) 1266, 1281, 1326, 1341
Hsp92II CATG 8 cut(s) 559, 1465, 1798, 1991, 2154, 2281, 2391, 2518
HspAI GCGC 4 cut(s) 647, 1178, 1433, 1451
KpnI GGTACC 1 cut(s) 1017
KspI CCGCGG 2 cut(s) 435, 2193
LguI GCTCTTC 2 cut(s) 2226, 2463
LmnI GCTCC 6 cut(s) 181, 1110, 1170, 1542, 2014, 2035
LweI GCATC 5 cut(s) 39, 708, 1603, 1878, 1909
MaeI CTAG 8 cut(s) 894, 911, 965, 1151, 1157, 1289, 1349, 1539
MaeII ACGT 4 cut(s) 1281, 1341, 1446, 1616
MaeIII GTNAC 6 cut(s) 448, 880, 913, 1438, 1612, 1686
MbiI CCGCTC 1 cut(s) 2017
MfeI CAATTG 1 cut(s) 1374
MflI RGATCY 3 cut(s) 428, 1577, 1804
MhlI GDGCHC 6 cut(s) 1115, 1256, 1897, 2091, 2238, 2475
MlsI TGGCCA 2 cut(s) 458, 1466
MluCI AATT 5 cut(s) 64, 347, 662, 1374, 2561
MluNI TGGCCA 2 cut(s) 458, 1466
MlyI GAGTC 8 cut(s) 410, 1315, 1375, 1691, 2111, 2147, 2348, 2384
MmeI TCCRAC 1 cut(s) 429
Mox20I TGGCCA 2 cut(s) 458, 1466
MroXI GAANNNNTTC 2 cut(s) 662, 1386
MscI TGGCCA 2 cut(s) 458, 1466
MseI TTAA 2 cut(s) 68, 987
MslI CAYNNNNRTG 5 cut(s) 99, 554, 1493, 2243, 2480
Msp20I TGGCCA 2 cut(s) 458, 1466
MspA1I CMGCKG 7 cut(s) 434, 688, 742, 1006, 1750, 2056, 2192
MunI CAATTG 1 cut(s) 1374
Mva1269I GAATGC 1 cut(s) 757
MvaI CCWGG 3 cut(s) 262, 1969, 2411
MvnI CGCG 6 cut(s) 434, 584, 1311, 1433, 1451, 2192
NcoI CCATGG 1 cut(s) 1461
NlaIII CATG 8 cut(s) 559, 1465, 1798, 1991, 2154, 2281, 2391, 2518
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 4 cut(s) 448, 1438, 1612, 1686
NspI RCATGY 1 cut(s) 559
OliI CACNNNNGTG 1 cut(s) 99
PagI TCATGA 2 cut(s) 2277, 2514
PaqCI CACCTGC 1 cut(s) 1963
PceI AGGCCT 1 cut(s) 598
PciSI GCTCTTC 2 cut(s) 2226, 2463
PcsI WCGNNNNNNNCGW 4 cut(s) 368, 1301, 1361, 1770
PctI GAATGC 1 cut(s) 757
PdmI GAANNNNTTC 2 cut(s) 662, 1386
PfeI GAWTC 5 cut(s) 251, 658, 1122, 1861, 1880
PflMI CCANNNNNTGG 1 cut(s) 1237
PinAI ACCGGT 2 cut(s) 1010, 2642
Ple19I CGATCG 1 cut(s) 2653
PleI GAGTC 8 cut(s) 409, 1314, 1374, 1690, 2111, 2146, 2348, 2383
PpsI GAGTC 8 cut(s) 409, 1314, 1374, 1690, 2111, 2146, 2348, 2383
PpuMI RGGWCCY 2 cut(s) 226, 366
PshAI GACNNNNGTC 2 cut(s) 1445, 1681
PsiI TTATAA 1 cut(s) 1475
Psp124BI GAGCTC 3 cut(s) 1115, 2238, 2475
Psp5II RGGWCCY 2 cut(s) 226, 366
Psp6I CCWGG 3 cut(s) 260, 1967, 2409
PspFI CCCAGC 1 cut(s) 968
PspGI CCWGG 3 cut(s) 260, 1967, 2409
PspOMI GGGCCC 1 cut(s) 1252
PspPPI RGGWCCY 2 cut(s) 226, 366
PstI CTGCAG 2 cut(s) 2137, 2374
PstNI CAGNNNCTG 4 cut(s) 709, 1753, 2141, 2378
PsuI RGATCY 3 cut(s) 428, 1577, 1804
PvuI CGATCG 1 cut(s) 2653
PvuII CAGCTG 3 cut(s) 742, 1006, 1750
RseI CAYNNNNRTG 5 cut(s) 99, 554, 1493, 2243, 2480
SacI GAGCTC 3 cut(s) 1115, 2238, 2475
SacII CCGCGG 2 cut(s) 435, 2193
SalI GTCGAC 2 cut(s) 1283, 1343
SapI GCTCTTC 2 cut(s) 2226, 2463
SaqAI TTAA 2 cut(s) 68, 987
SchI GAGTC 8 cut(s) 410, 1315, 1375, 1691, 2111, 2147, 2348, 2384
SduI GDGCHC 6 cut(s) 1115, 1256, 1897, 2091, 2238, 2475
SfaNI GCATC 5 cut(s) 39, 708, 1603, 1878, 1909
SfcI CTRYAG 3 cut(s) 701, 2133, 2370
Sfr303I CCGCGG 2 cut(s) 435, 2193
SgrBI CCGCGG 2 cut(s) 435, 2193
SinI GGWCC 6 cut(s) 226, 366, 504, 1033, 1676, 1791
SmiMI CAYNNNNRTG 5 cut(s) 99, 554, 1493, 2243, 2480
SmlI CTYRAG 2 cut(s) 853, 2069
SmoI CTYRAG 2 cut(s) 853, 2069
SpeI ACTAGT 1 cut(s) 910
Sse9I AATT 5 cut(s) 64, 347, 662, 1374, 2561
SseBI AGGCCT 1 cut(s) 598
SspMI CTAG 8 cut(s) 894, 911, 965, 1151, 1157, 1289, 1349, 1539
SstI GAGCTC 3 cut(s) 1115, 2238, 2475
StuI AGGCCT 1 cut(s) 598
StyI CCWWGG 7 cut(s) 156, 465, 670, 1288, 1348, 1461, 1636
TaaI ACNGT 8 cut(s) 85, 238, 454, 508, 705, 773, 849, 880
TaiI ACGT 4 cut(s) 1284, 1344, 1449, 1619
TaqII GACCGA 1 cut(s) 1359
TasI AATT 5 cut(s) 64, 347, 662, 1374, 2561
TatI WGTACW 4 cut(s) 327, 849, 2217, 2454
TauI GCSGC 8 cut(s) 623, 1314, 2045, 2048, 2303, 2540, 2609, 2612
TfiI GAWTC 5 cut(s) 251, 658, 1122, 1861, 1880
Tru1I TTAA 2 cut(s) 68, 987
Tru9I TTAA 2 cut(s) 68, 987
TscAI CASTG 3 cut(s) 59, 459, 1627
TseFI GTSAC 4 cut(s) 448, 1438, 1612, 1686
Tsp45I GTSAC 4 cut(s) 448, 1438, 1612, 1686
TspDTI ATGAA 7 cut(s) 554, 1114, 1791, 2294, 2331, 2531, 2568
TspGWI ACGGA 1 cut(s) 805
TspRI CASTG 3 cut(s) 59, 459, 1627
Van91I CCANNNNNTGG 1 cut(s) 1237
VpaK11BI GGWCC 6 cut(s) 226, 366, 504, 1033, 1676, 1791
XapI RAATTY 2 cut(s) 64, 2561
XceI RCATGY 1 cut(s) 559
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XmaJI CCTAGG 2 cut(s) 1288, 1348
XmiI GTMKAC 3 cut(s) 1083, 1284, 1344
XmnI GAANNNNTTC 2 cut(s) 662, 1386
XspI CTAG 8 cut(s) 894, 911, 965, 1151, 1157, 1289, 1349, 1539
ZraI GACGTC 2 cut(s) 1282, 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.