Rmu_sc0001578.1_g000014

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001578.1
OG0000087
Physical Location & Seq
Forward (+)
24117 .. 26405
2289 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001578.1_g000014.1.cds

Sequence Viewer

Length: 1281 bp
atggttccagatatagcgagatttgaggtccccggtaccgtagttaggatggaatcaggagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgatcggctagggctagggtggctccccgtgaaagcgccgaagaggaaaccctggaaaggcaaggaggaggacagaatggatgatgcccagttgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacaagtcggtcaattgaagaaacccttctggagatcaccgatgagggatatggtgaacctgaccccgacgctcccgtgacccacgtcgtgcagccctctgtggccgacgttatcacgatagatgagactgggacaggaaaggtaccggtccccgtgcctatttcctctcgttccactgggagcgatgaggcattgcttcctggtgagaagaagagatcccataggcaccggcatcgaagtgataaggaggtgacgtacactggccgggatgttcaaggtttcggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcaccttcgcttggcttgttgtctcccgccattccggtaatccccaagaagcccaccaagcagctgttaagtgagtacagggttgctgatgaaaagtttgtgcggtccatgcttggtgacctgaaggatattgacctcgaccgggttcgggccaaggataatacgccccaagagaatctccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgagcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagagggactcattgaaggctgagatggccgccgctaagcagcggatcgcggagcttgaggagtctgccgtgtcatggaagaagaaggcagaccacctggaggatcgccttcccgcggagaggcacgaggccgtagaggagtacaagtcctcggaagagctcatcgatatgctgactgctgcccaagataaggatgtcatcatgaattttaaggagtgggtggcggccggatatttaggtgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaagcggcggccaagtctggtgcaggtgggtcccagagtaccggtggagagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

426

Amino Acids

47.19

Weight (kDa)

5.59

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 883, 1235
Acc36I ACCTGC 2 cut(s) 883, 1235
Acc65I GGTACC 2 cut(s) 35, 424
AccB1I GGYRCC 3 cut(s) 35, 424, 507
AccB7I CCANNNNNTGG 1 cut(s) 217
AccBSI CCGCTC 1 cut(s) 1273
AccI GTMKAC 1 cut(s) 264
AccII CGCG 2 cut(s) 983, 1049
AclWI GGATC 4 cut(s) 88, 492, 986, 1044
AcoI YGGCCR 5 cut(s) 384, 544, 960, 1158, 1230
AcsI RAATTY 2 cut(s) 1138, 1181
AcuI CTGAAG 3 cut(s) 132, 749, 884
AcyI GRCGYC 2 cut(s) 246, 840
AdeI CACNNNGTG 1 cut(s) 370
AfaI GTAC 9 cut(s) 37, 89, 283, 426, 539, 683, 830, 1076, 1261
AgeI ACCGGT 2 cut(s) 427, 1262
AgsI TTSAA 4 cut(s) 299, 557, 823, 949
AhdI GACNNNNNGTC 1 cut(s) 271
AjiI CACGTC 1 cut(s) 367
AjnI CCWGG 7 cut(s) 62, 101, 173, 234, 481, 1029, 1197
AluBI AGCT 6 cut(s) 110, 670, 925, 988, 1093, 1178
AluI AGCT 6 cut(s) 110, 670, 925, 988, 1093, 1178
Alw21I GWGCWC 1 cut(s) 1095
Alw26I GTCTC 3 cut(s) 401, 633, 1199
AlwI GGATC 4 cut(s) 88, 492, 986, 1044
Ama87I CYCGRG 2 cut(s) 592, 795
AoxI GGCC 9 cut(s) 232, 384, 544, 756, 918, 960, 1062, 1158, 1230
ApeKI GCWGC 4 cut(s) 373, 667, 973, 1112
ApoI RAATTY 2 cut(s) 1138, 1181
AsiGI ACCGGT 2 cut(s) 427, 1262
Asp700I GAANNNNTTC 1 cut(s) 306
Asp718I GGTACC 2 cut(s) 35, 424
AspA2I CCTAGG 1 cut(s) 268
AspLEI GCGC 1 cut(s) 160
AspS9I GGNCC 7 cut(s) 28, 232, 430, 596, 711, 756, 1251
AsuC2I CCSGG 7 cut(s) 33, 548, 593, 594, 749, 796, 797
AsuHPI GGTGA 9 cut(s) 310, 347, 497, 544, 581, 600, 734, 907, 1184
AvaI CYCGRG 2 cut(s) 592, 795
AvaII GGWCC 5 cut(s) 28, 430, 596, 711, 1251
AvrII CCTAGG 1 cut(s) 268
BaeGI GKGCMC 1 cut(s) 817
BaeI ACNNNNGTAYC 2 cut(s) 27, 60
BanI GGYRCC 3 cut(s) 35, 424, 507
BanII GRGCYC 1 cut(s) 1095
BauI CACGAG 1 cut(s) 1058
BbsI GAAGAC 2 cut(s) 87, 249
Bbv12I GWGCWC 1 cut(s) 1095
BbvI GCAGC 4 cut(s) 385, 679, 985, 1099
BccI CCATC 4 cut(s) 43, 211, 223, 952
BceAI ACGGC 2 cut(s) 986, 1049
BcgI CGANNNNNNTGC 2 cut(s) 497, 531
BciT130I CCWGG 7 cut(s) 64, 103, 175, 236, 483, 1031, 1199
BciVI GTATCC 1 cut(s) 67
BcnI CCSGG 7 cut(s) 33, 548, 593, 594, 749, 796, 797
BcoDI GTCTC 3 cut(s) 401, 633, 1199
BfaI CTAG 3 cut(s) 131, 137, 269
BfoI RGCGCY 1 cut(s) 161
BfuAI ACCTGC 2 cut(s) 883, 1235
BfuI GTATCC 1 cut(s) 67
BisI GCNGC 9 cut(s) 374, 668, 963, 966, 974, 1113, 1158, 1227, 1230
BlnI CCTAGG 1 cut(s) 268
BlpI GCTNAGC 1 cut(s) 969
BlsI GCNGC 9 cut(s) 375, 669, 964, 967, 975, 1114, 1159, 1228, 1231
Bme18I GGWCC 5 cut(s) 28, 430, 596, 711, 1251
BmeRI GACNNNNNGTC 1 cut(s) 271
BmeT110I CYCGRG 2 cut(s) 592, 795
BmgBI CACGTC 1 cut(s) 367
BmgT120I GGNCC 7 cut(s) 28, 232, 430, 596, 711, 756, 1251
BmrI ACTGGG 3 cut(s) 205, 420, 468
BmsI GCATC 3 cut(s) 196, 523, 798
BmuI ACTGGG 3 cut(s) 205, 420, 468
BoxI GACNNNNGTC 2 cut(s) 365, 601
BpiI GAAGAC 2 cut(s) 87, 249
BplI GAGNNNNNCTC 2 cut(s) 926, 958
BpmI CTGGAG 4 cut(s) 332, 947, 1052, 1220
Bpu1102I GCTNAGC 1 cut(s) 969
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 7 cut(s) 33, 548, 593, 594, 749, 796, 797
Bsa29I ATCGAT 3 cut(s) 123, 258, 1098
BsaBI GATNNNNATC 2 cut(s) 123, 858
BsaHI GRCGYC 2 cut(s) 246, 840
BsaI GGTCTC 1 cut(s) 1199
BsaWI WCCGGW 3 cut(s) 427, 640, 1262
BsaXI ACNNNNNCTCC 4 cut(s) 521, 551, 1064, 1094
Bse118I RCCGGY 3 cut(s) 427, 510, 1262
Bse1I ACTGG 5 cut(s) 91, 211, 415, 463, 547
Bse3DI GCAATG 1 cut(s) 473
Bse8I GATNNNNATC 2 cut(s) 123, 858
BseBI CCWGG 7 cut(s) 64, 103, 175, 236, 483, 1031, 1199
BseCI ATCGAT 3 cut(s) 123, 258, 1098
BseGI GGATG 4 cut(s) 54, 208, 556, 1132
BseJI GATNNNNATC 2 cut(s) 123, 858
BseMI GCAATG 1 cut(s) 473
BseMII CTCAG 1 cut(s) 945
BseNI ACTGG 5 cut(s) 91, 211, 415, 463, 547
BseRI GAGGAG 4 cut(s) 203, 884, 1007, 1085
BseSI GKGCMC 1 cut(s) 817
BseX3I CGGCCG 1 cut(s) 1158
BseXI GCAGC 4 cut(s) 385, 679, 985, 1099
BsgI GTGCAG 2 cut(s) 392, 1263
Bsh1236I CGCG 2 cut(s) 983, 1049
Bsh1285I CGRYCG 3 cut(s) 127, 748, 1161
BshFI GGCC 9 cut(s) 234, 386, 546, 758, 920, 962, 1064, 1160, 1232
BshNI GGYRCC 3 cut(s) 35, 424, 507
BshTI ACCGGT 2 cut(s) 427, 1262
BshVI ATCGAT 3 cut(s) 123, 258, 1098
BsiEI CGRYCG 3 cut(s) 127, 748, 1161
BsiHKAI GWGCWC 1 cut(s) 1095
BsiHKCI CYCGRG 2 cut(s) 592, 795
BslFI GGGAC 6 cut(s) 14, 416, 427, 609, 953, 1237
BsmAI GTCTC 3 cut(s) 401, 633, 1199
BsmFI GGGAC 6 cut(s) 14, 416, 427, 609, 953, 1237
BsnI GGCC 9 cut(s) 234, 386, 546, 758, 920, 962, 1064, 1160, 1232
Bso31I GGTCTC 1 cut(s) 1199
BsoBI CYCGRG 2 cut(s) 592, 795
Bsp1286I GDGCHC 2 cut(s) 817, 1095
Bsp143I GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
Bsp1720I GCTNAGC 1 cut(s) 969
BspANI GGCC 9 cut(s) 234, 386, 546, 758, 920, 962, 1064, 1160, 1232
BspCNI CTCAG 1 cut(s) 946
BspDI ATCGAT 3 cut(s) 123, 258, 1098
BspFNI CGCG 2 cut(s) 983, 1049
BspHI TCATGA 1 cut(s) 1134
BspMI ACCTGC 2 cut(s) 883, 1235
BspPI GGATC 4 cut(s) 88, 492, 986, 1044
BspQI GCTCTTC 1 cut(s) 1083
BspT107I GGYRCC 3 cut(s) 35, 424, 507
BspTNI GGTCTC 1 cut(s) 1199
BsrBI CCGCTC 1 cut(s) 1273
BsrDI GCAATG 1 cut(s) 473
BsrFI RCCGGY 3 cut(s) 427, 510, 1262
BsrI ACTGG 5 cut(s) 91, 211, 415, 463, 547
BssAI RCCGGY 3 cut(s) 427, 510, 1262
BssMI GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
BssNI GRCGYC 2 cut(s) 246, 840
BssSI CACGAG 1 cut(s) 1058
BssT1I CCWWGG 2 cut(s) 268, 759
Bst2BI CACGAG 1 cut(s) 1058
Bst2UI CCWGG 7 cut(s) 64, 103, 175, 236, 483, 1031, 1199
Bst4CI ACNGT 1 cut(s) 40
Bst6I CTCTTC 5 cut(s) 158, 488, 566, 824, 1083
BstACI GRCGYC 2 cut(s) 246, 840
BstC8I GCNNGC 3 cut(s) 108, 813, 844
BstDEI CTNAG 2 cut(s) 954, 969
BstDSI CCRYGG 1 cut(s) 1047
BstEII GGTNACC 1 cut(s) 722
BstF5I GGATG 4 cut(s) 54, 208, 556, 1132
BstFNI CGCG 2 cut(s) 983, 1049
BstH2I RGCGCY 1 cut(s) 161
BstHHI GCGC 1 cut(s) 160
BstKTI GATC 8 cut(s) 83, 127, 318, 500, 589, 981, 1039, 1219
BstMAI GTCTC 3 cut(s) 401, 633, 1199
BstMBI GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
BstMCI CGRYCG 3 cut(s) 127, 748, 1161
BstMWI GCNNNNNNNGC 6 cut(s) 107, 142, 664, 715, 839, 959
BstNI CCWGG 7 cut(s) 64, 103, 175, 236, 483, 1031, 1199
BstPAI GACNNNNGTC 2 cut(s) 365, 601
BstPI GGTNACC 1 cut(s) 722
BstSLI GKGCMC 1 cut(s) 817
BstUI CGCG 2 cut(s) 983, 1049
BstV1I GCAGC 4 cut(s) 385, 679, 985, 1099
BstV2I GAAGAC 2 cut(s) 87, 249
BstX2I RGATCY 1 cut(s) 497
BstYI RGATCY 1 cut(s) 497
BstZI CGGCCG 1 cut(s) 1158
Bsu15I ATCGAT 3 cut(s) 123, 258, 1098
BsuI GTATCC 1 cut(s) 67
BsuRI GGCC 9 cut(s) 234, 386, 546, 758, 920, 962, 1064, 1160, 1232
BsuTUI ATCGAT 3 cut(s) 123, 258, 1098
BtgI CCRYGG 1 cut(s) 1047
BtgZI GCGATG 1 cut(s) 480
BtrI CACGTC 1 cut(s) 367
BtsCI GGATG 4 cut(s) 54, 208, 556, 1132
BtsIMutI CAGTG 2 cut(s) 456, 540
BveI ACCTGC 2 cut(s) 883, 1235
Cac8I GCNNGC 3 cut(s) 108, 813, 844
CciI TCATGA 1 cut(s) 1134
CfoI GCGC 1 cut(s) 160
Cfr10I RCCGGY 3 cut(s) 427, 510, 1262
Cfr13I GGNCC 7 cut(s) 28, 232, 430, 596, 711, 756, 1251
Cfr42I CCGCGG 1 cut(s) 1050
Cfr9I CCCGGG 2 cut(s) 592, 795
ClaI ATCGAT 3 cut(s) 123, 258, 1098
CseI GACGC 3 cut(s) 254, 359, 848
Csp6I GTAC 9 cut(s) 36, 88, 282, 425, 538, 682, 829, 1075, 1260
CspAI ACCGGT 2 cut(s) 427, 1262
CviAII CATG 5 cut(s) 715, 805, 908, 1008, 1135
CviQI GTAC 9 cut(s) 36, 88, 282, 425, 538, 682, 829, 1075, 1260
DdeI CTNAG 2 cut(s) 954, 969
DpnI GATC 8 cut(s) 82, 126, 317, 499, 588, 980, 1038, 1218
DpnII GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
DraIII CACNNNGTG 1 cut(s) 370
DriI GACNNNNNGTC 1 cut(s) 271
EaeI YGGCCR 5 cut(s) 384, 544, 960, 1158, 1230
EagI CGGCCG 1 cut(s) 1158
Eam1104I CTCTTC 5 cut(s) 158, 488, 566, 824, 1083
Eam1105I GACNNNNNGTC 1 cut(s) 271
EarI CTCTTC 5 cut(s) 158, 488, 566, 824, 1083
Ecl136II GAGCTC 1 cut(s) 1093
EclXI CGGCCG 1 cut(s) 1158
Eco130I CCWWGG 2 cut(s) 268, 759
Eco24I GRGCYC 1 cut(s) 1095
Eco31I GGTCTC 1 cut(s) 1199
Eco32I GATATC 1 cut(s) 121
Eco47I GGWCC 5 cut(s) 28, 430, 596, 711, 1251
Eco52I CGGCCG 1 cut(s) 1158
Eco53kI GAGCTC 1 cut(s) 1093
Eco57I CTGAAG 3 cut(s) 132, 749, 884
Eco88I CYCGRG 2 cut(s) 592, 795
Eco91I GGTNACC 1 cut(s) 722
EcoICRI GAGCTC 1 cut(s) 1093
EcoO109I RGGNCCY 2 cut(s) 28, 1251
EcoO65I GGTNACC 1 cut(s) 722
EcoRII CCWGG 7 cut(s) 62, 101, 173, 234, 481, 1029, 1197
EcoRV GATATC 1 cut(s) 121
EcoT14I CCWWGG 2 cut(s) 268, 759
EcoT38I GRGCYC 1 cut(s) 1095
ErhI CCWWGG 2 cut(s) 268, 759
FaeI CATG 5 cut(s) 718, 808, 911, 1011, 1138
FalI AAGNNNNNCTT 4 cut(s) 234, 266, 291, 323
FaqI GGGAC 6 cut(s) 14, 416, 427, 609, 953, 1237
FatI CATG 5 cut(s) 714, 804, 907, 1007, 1134
FauI CCCGC 4 cut(s) 640, 804, 1054, 1182
FblI GTMKAC 1 cut(s) 264
Fnu4HI GCNGC 9 cut(s) 374, 668, 963, 966, 974, 1113, 1158, 1227, 1230
FokI GGATG 4 cut(s) 61, 215, 563, 1139
FriOI GRGCYC 1 cut(s) 1095
Fsp4HI GCNGC 9 cut(s) 374, 668, 963, 966, 974, 1113, 1158, 1227, 1230
FspBI CTAG 3 cut(s) 131, 137, 269
GlaI GCGC 1 cut(s) 159
GluI GCNGC 9 cut(s) 374, 668, 963, 966, 974, 1113, 1158, 1227, 1230
GsuI CTGGAG 4 cut(s) 332, 947, 1052, 1220
HaeII RGCGCY 1 cut(s) 161
HaeIII GGCC 9 cut(s) 234, 386, 546, 758, 920, 962, 1064, 1160, 1232
HgaI GACGC 3 cut(s) 254, 359, 848
HhaI GCGC 1 cut(s) 160
Hin1I GRCGYC 2 cut(s) 246, 840
Hin1II CATG 5 cut(s) 718, 808, 911, 1011, 1138
Hin6I GCGC 1 cut(s) 158
HinP1I GCGC 1 cut(s) 158
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 6 cut(s) 53, 602, 781, 800, 941, 995
HphI GGTGA 9 cut(s) 310, 347, 497, 544, 581, 600, 734, 907, 1184
Hpy166II GTNNAC 4 cut(s) 265, 338, 540, 829
Hpy188I TCNGA 3 cut(s) 864, 889, 1087
Hpy188III TCNNGA 6 cut(s) 8, 57, 311, 397, 1135, 1220
Hpy8I GTNNAC 4 cut(s) 265, 338, 540, 829
Hpy99I CGWCG 4 cut(s) 88, 353, 371, 392
HpyCH4III ACNGT 1 cut(s) 40
HpyCH4IV ACGT 3 cut(s) 366, 390, 536
HpyCH4V TGCA 2 cut(s) 373, 1244
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 142, 664, 715, 839, 959
HpyF3I CTNAG 2 cut(s) 954, 969
HpySE526I ACGT 3 cut(s) 366, 390, 536
Hsp92I GRCGYC 2 cut(s) 246, 840
Hsp92II CATG 5 cut(s) 718, 808, 911, 1011, 1138
HspAI GCGC 1 cut(s) 158
KflI GGGWCCC 1 cut(s) 1251
KpnI GGTACC 2 cut(s) 39, 428
KspI CCGCGG 1 cut(s) 1050
Kzo9I GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
LguI GCTCTTC 1 cut(s) 1083
LmnI GCTCC 5 cut(s) 59, 150, 358, 462, 985
Lsp1109I GCAGC 4 cut(s) 385, 679, 985, 1099
LweI GCATC 3 cut(s) 196, 523, 798
MaeI CTAG 3 cut(s) 131, 137, 269
MaeII ACGT 3 cut(s) 366, 390, 536
MaeIII GTNAC 4 cut(s) 358, 532, 606, 722
MalI GATC 8 cut(s) 82, 126, 317, 499, 588, 980, 1038, 1218
MbiI CCGCTC 1 cut(s) 1273
MboI GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
MfeI CAATTG 1 cut(s) 294
MflI RGATCY 1 cut(s) 497
MhlI GDGCHC 2 cut(s) 817, 1095
MluCI AATT 3 cut(s) 294, 1138, 1181
MlyI GAGTC 3 cut(s) 611, 935, 1004
MroXI GAANNNNTTC 1 cut(s) 306
MseI TTAA 2 cut(s) 674, 1143
MslI CAYNNNNRTG 3 cut(s) 258, 519, 1100
MspA1I CMGCKG 3 cut(s) 670, 976, 1049
MunI CAATTG 1 cut(s) 294
MvaI CCWGG 7 cut(s) 64, 103, 175, 236, 483, 1031, 1199
MvnI CGCG 2 cut(s) 983, 1049
MwoI GCNNNNNNNGC 6 cut(s) 107, 142, 664, 715, 839, 959
NciI CCSGG 7 cut(s) 33, 548, 593, 594, 749, 796, 797
NdeII GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
NlaIII CATG 5 cut(s) 718, 808, 911, 1011, 1138
NmuCI GTSAC 4 cut(s) 358, 532, 606, 722
PagI TCATGA 1 cut(s) 1134
PaqCI CACCTGC 2 cut(s) 883, 1235
PciSI GCTCTTC 1 cut(s) 1083
PcsI WCGNNNNNNNCGW 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 306
PfeI GAWTC 3 cut(s) 53, 781, 800
PflMI CCANNNNNTGG 1 cut(s) 217
PfoI TCCNGGA 1 cut(s) 1197
PinAI ACCGGT 2 cut(s) 427, 1262
PkrI GCNGC 9 cut(s) 375, 669, 964, 967, 975, 1114, 1159, 1228, 1231
Ple19I CGATCG 1 cut(s) 127
PleI GAGTC 3 cut(s) 610, 935, 1003
PpsI GAGTC 3 cut(s) 610, 935, 1003
PpuMI RGGWCCY 2 cut(s) 28, 1251
PshAI GACNNNNGTC 2 cut(s) 365, 601
Psp124BI GAGCTC 1 cut(s) 1095
Psp5II RGGWCCY 2 cut(s) 28, 1251
Psp6I CCWGG 7 cut(s) 62, 101, 173, 234, 481, 1029, 1197
PspEI GGTNACC 1 cut(s) 722
PspGI CCWGG 7 cut(s) 62, 101, 173, 234, 481, 1029, 1197
PspPI GGNCC 7 cut(s) 28, 232, 430, 596, 711, 756, 1251
PspPPI RGGWCCY 2 cut(s) 28, 1251
PsuI RGATCY 1 cut(s) 497
PvuI CGATCG 1 cut(s) 127
PvuII CAGCTG 1 cut(s) 670
RsaI GTAC 9 cut(s) 37, 89, 283, 426, 539, 683, 830, 1076, 1261
RsaNI GTAC 9 cut(s) 36, 88, 282, 425, 538, 682, 829, 1075, 1260
RseI CAYNNNNRTG 3 cut(s) 258, 519, 1100
SacI GAGCTC 1 cut(s) 1095
SacII CCGCGG 1 cut(s) 1050
SalI GTCGAC 1 cut(s) 263
SapI GCTCTTC 1 cut(s) 1083
SaqAI TTAA 2 cut(s) 674, 1143
SatI GCNGC 9 cut(s) 374, 668, 963, 966, 974, 1113, 1158, 1227, 1230
Sau3AI GATC 8 cut(s) 80, 124, 315, 497, 586, 978, 1036, 1216
Sau96I GGNCC 7 cut(s) 28, 232, 430, 596, 711, 756, 1251
SchI GAGTC 3 cut(s) 611, 935, 1004
SduI GDGCHC 2 cut(s) 817, 1095
SfaNI GCATC 3 cut(s) 196, 523, 798
Sfr303I CCGCGG 1 cut(s) 1050
SgrBI CCGCGG 1 cut(s) 1050
SinI GGWCC 5 cut(s) 28, 430, 596, 711, 1251
SmaI CCCGGG 2 cut(s) 594, 797
SmiMI CAYNNNNRTG 3 cut(s) 258, 519, 1100
SmlI CTYRAG 1 cut(s) 989
SmoI CTYRAG 1 cut(s) 989
Sse9I AATT 3 cut(s) 294, 1138, 1181
SspMI CTAG 3 cut(s) 131, 137, 269
SstI GAGCTC 1 cut(s) 1095
StyI CCWWGG 2 cut(s) 268, 759
TaaI ACNGT 1 cut(s) 40
TaiI ACGT 3 cut(s) 369, 393, 539
TaqI TCGA 7 cut(s) 123, 258, 264, 275, 517, 744, 1098
TaqII GACCGA 1 cut(s) 279
TasI AATT 3 cut(s) 294, 1138, 1181
TatI WGTACW 2 cut(s) 681, 1074
TauI GCSGC 5 cut(s) 965, 968, 1160, 1229, 1232
TfiI GAWTC 3 cut(s) 53, 781, 800
Tru1I TTAA 2 cut(s) 674, 1143
Tru9I TTAA 2 cut(s) 674, 1143
TscAI CASTG 2 cut(s) 463, 547
TseFI GTSAC 4 cut(s) 358, 532, 606, 722
TseI GCWGC 4 cut(s) 373, 667, 973, 1112
Tsp45I GTSAC 4 cut(s) 358, 532, 606, 722
TspDTI ATGAA 3 cut(s) 711, 896, 1151
TspGWI ACGGA 1 cut(s) 776
TspMI CCCGGG 2 cut(s) 592, 795
TspRI CASTG 2 cut(s) 463, 547
Van91I CCANNNNNTGG 1 cut(s) 217
VpaK11BI GGWCC 5 cut(s) 28, 430, 596, 711, 1251
XapI RAATTY 2 cut(s) 1138, 1181
XcmI CCANNNNNNNNNTGG 1 cut(s) 1262
XmaI CCCGGG 2 cut(s) 592, 795
XmaJI CCTAGG 1 cut(s) 268
XmiI GTMKAC 1 cut(s) 264
XmnI GAANNNNTTC 1 cut(s) 306
XspI CTAG 3 cut(s) 131, 137, 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.