Rmu_sc0002986.1_g000063

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002986.1
OG0000087
Physical Location & Seq
Forward (+)
298409 .. 300633
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002986.1_g000063.1.cds

Sequence Viewer

Length: 2007 bp
atggtcttagatctagttaggctaacccttgtgcttctgattccagatatcgcgagttttgaggtttccggtatcgtagttaggatggaatcagaaaccaagggtggggatacgggatcatcgtaccagtcctctgccagtcaagctgaaatggataacgatcgtgaggagtccaatgcgggtgagagcgagggtggatctgcggaggccccggtagtgacggtggcaattcccgagggcatactgaagcctaggtatacacttgcggacgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcttcgtcatgcgactgaagtggggaataccggacgcggtggagcttaggcctctcaaggatggagagatggccgcgaatcctgccccggggtgggtggcgctgcacgagaaccagttccaccaagggttatcgctaccgctgccccggtgcctacagtatctgttgcggatgctgaacctgtcaccggggcagttgaccccgaatgctattcgacaaatatacagtatgattgccatgtgggatttgtgccaacaagggtggccttctgtaaatgaattctgcgcggtacatagggtcctgtactcaaggaagctgtcctgtgcgggtacggtgacatttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagaaaaaggcggaggaataaagtatttctagctggggggtggtggcaaattaaaaataagaagtggcaactgaccggtaccttccaagctatcggggaccaggcctatactttatcagaggtagaaaggaaaaggatagcccgggtatatgttgtttggacagagaaagagaggagctcttatagattcatccggcattctatactttatagcctagggctaggatggctccccgtgaaagcgccgaagaggaaaccccagaaaggcaaagaggagaacagaatggatgataatcagttgatggaaatgctgatgggccagggagaagacgcccttcacattgatgtcgacctagggtcgaagggtatgggtcggtccatggaagagaccctactggagatcactgatgcgggatatggggaacctgatcctgaagctcctgtgacccaagtcgtgcagccttctgctgcagacgtcatcacgatagctgataccgggatgggaaaggtaccggtctccgtgtctatttcttctcactccattgggagcgatgaggcattgctaccaggtgagaagaaaagatcacataggcaccgacaccgaagtgataagcatgaggtgacgtataccggctgggatgttaagggatccagtgtgaagaggcagaagaaagatcacccaggaccagagtcgtcgccttcgcttggcttgttgtctcctgccattccggtaatccccaagaagcctatcaagcagctgttgagtgagtacggggttgctgatgaaaagttcgtgcggtccatgcttagtgacctgaaagacattgacctcgaccgggtgcgggccaaggacaatacacccaaagagaatcgctgtctcgcccgggaatccatgatgcgggcactcttcaatgtgtacgcgattgatgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggcgagaaggccaagctggagaaggagcgggactcaatgattgccgagatggacgcggctaagcagcgaatcgtggagcttgagggtgaaatctctgaggcacgggaagaggtgaaaagtgctcgggactctgaaaaaaaagctacagagtctgccatgccatggaaggagaaggcagactacctggaggatcgccttcccgtggagaagcacgaggctgtggaggagtacaagtcctcccaagagctcattgctatgctaactgctgctcaagataaggctgtcatcatgaagttcaaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

668

Amino Acids

74.8

Weight (kDa)

5.92

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1675
AatII GACGTC 1 cut(s) 1182
Acc36I ACCTGC 1 cut(s) 1675
Acc65I GGTACC 2 cut(s) 782, 1213
AccB1I GGYRCC 4 cut(s) 465, 782, 1213, 1296
AccB7I CCANNNNNTGG 1 cut(s) 1863
AccBSI CCGCTC 1 cut(s) 1729
AccI GTMKAC 3 cut(s) 257, 1053, 1331
AccII CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
AclWI GGATC 6 cut(s) 124, 205, 1127, 1347, 1360, 1899
AcoI YGGCCR 1 cut(s) 387
AcsI RAATTY 1 cut(s) 593
AcuI CTGAAG 4 cut(s) 266, 353, 1158, 1676
AcyI GRCGYC 2 cut(s) 1035, 1179
AfaI GTAC 9 cut(s) 125, 606, 620, 646, 784, 1215, 1475, 1622, 1931
AgeI ACCGGT 2 cut(s) 779, 1216
AgsI TTSAA 2 cut(s) 1615, 1999
AhdI GACNNNNNGTC 1 cut(s) 1060
AhlI ACTAGT 1 cut(s) 679
AjnI CCWGG 5 cut(s) 804, 1023, 1270, 1384, 1884
AleI CACNNNNGTG 1 cut(s) 1308
Alw21I GWGCWC 3 cut(s) 884, 1825, 1950
Alw26I GTCTC 4 cut(s) 1085, 1225, 1425, 1586
AlwI GGATC 6 cut(s) 124, 205, 1127, 1347, 1360, 1899
AlwNI CAGNNNCTG 2 cut(s) 478, 1853
Ama87I CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
AoxI GGCC 8 cut(s) 207, 365, 387, 578, 807, 1021, 1548, 1710
ApeKI GCWGC 7 cut(s) 418, 457, 1162, 1172, 1459, 1765, 1967
ApoI RAATTY 1 cut(s) 593
AsiGI ACCGGT 2 cut(s) 779, 1216
Asp700I GAANNNNTTC 1 cut(s) 431
Asp718I GGTACC 2 cut(s) 782, 1213
AspA2I CCTAGG 3 cut(s) 251, 919, 1057
AspLEI GCGC 3 cut(s) 418, 602, 949
AspS9I GGNCC 9 cut(s) 208, 273, 613, 802, 1021, 1080, 1388, 1503, 1548
AsuHPI GGTGA 9 cut(s) 194, 492, 661, 1286, 1336, 1373, 1699, 1799, 1825
AvaI CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
AvaII GGWCC 6 cut(s) 273, 613, 802, 1080, 1388, 1503
AvrII CCTAGG 3 cut(s) 251, 919, 1057
BaeGI GKGCMC 1 cut(s) 1609
BamHI GGATCC 1 cut(s) 1352
BanI GGYRCC 4 cut(s) 465, 782, 1213, 1296
BanII GRGCYC 2 cut(s) 884, 1950
BarI GAAGNNNNNNTAC 4 cut(s) 1080, 1112, 1865, 1897
BauI CACGAG 2 cut(s) 422, 1913
BbsI GAAGAC 1 cut(s) 1038
Bbv12I GWGCWC 3 cut(s) 884, 1825, 1950
BbvI GCAGC 7 cut(s) 405, 444, 1159, 1174, 1471, 1777, 1954
BccI CCATC 8 cut(s) 79, 371, 379, 924, 1000, 1012, 1198, 1744
BciT130I CCWGG 5 cut(s) 806, 1025, 1272, 1386, 1886
BciVI GTATCC 1 cut(s) 103
BcoDI GTCTC 4 cut(s) 1085, 1225, 1425, 1586
BcuI ACTAGT 1 cut(s) 679
BfaI CTAG 8 cut(s) 14, 252, 663, 680, 734, 920, 926, 1058
BfmI CTRYAG 3 cut(s) 470, 1173, 1845
BfoI RGCGCY 2 cut(s) 419, 950
BfuAI ACCTGC 1 cut(s) 1675
BfuI GTATCC 1 cut(s) 103
BglII AGATCT 2 cut(s) 10, 315
BlnI CCTAGG 3 cut(s) 251, 919, 1057
BlpI GCTNAGC 1 cut(s) 1761
Bme18I GGWCC 6 cut(s) 273, 613, 802, 1080, 1388, 1503
BmeRI GACNNNNNGTC 1 cut(s) 1060
BmeT110I CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
BmgT120I GGNCC 9 cut(s) 208, 273, 613, 802, 1021, 1080, 1388, 1503, 1548
BmsI GCATC 4 cut(s) 477, 1102, 1590, 1621
BoxI GACNNNNGTC 2 cut(s) 1154, 1393
BpiI GAAGAC 1 cut(s) 1038
BplI GAGNNNNNCTC 4 cut(s) 866, 898, 1718, 1750
BpmI CTGGAG 3 cut(s) 1121, 1739, 1907
Bpu10I CCTNAGC 1 cut(s) 362
Bpu1102I GCTNAGC 1 cut(s) 1761
BpuEI CTTGAG 4 cut(s) 356, 607, 1802, 1956
BsaBI GATNNNNATC 3 cut(s) 159, 996, 1650
BsaHI GRCGYC 2 cut(s) 1035, 1179
BsaI GGTCTC 2 cut(s) 1085, 1225
BsaWI WCCGGW 5 cut(s) 68, 346, 779, 1216, 1432
BsaXI ACNNNNNCTCC 4 cut(s) 1919, 1922, 1949, 1952
Bse118I RCCGGY 3 cut(s) 779, 1216, 1334
Bse1I ACTGG 5 cut(s) 127, 138, 430, 1104, 1356
Bse3DI GCAATG 2 cut(s) 1262, 1950
Bse8I GATNNNNATC 3 cut(s) 159, 996, 1650
BseBI CCWGG 5 cut(s) 806, 1025, 1272, 1386, 1886
BseGI GGATG 8 cut(s) 90, 382, 492, 894, 935, 997, 1209, 1348
BseJI GATNNNNATC 3 cut(s) 159, 996, 1650
BseMI GCAATG 2 cut(s) 1262, 1950
BseMII CTCAG 1 cut(s) 1788
BseNI ACTGG 5 cut(s) 127, 138, 430, 1104, 1356
BseRI GAGGAG 5 cut(s) 182, 892, 992, 1676, 1940
BseSI GKGCMC 1 cut(s) 1609
BseXI GCAGC 7 cut(s) 405, 444, 1159, 1174, 1471, 1777, 1954
BseYI CCCAGC 2 cut(s) 737, 1338
BsgI GTGCAG 2 cut(s) 404, 1181
Bsh1236I CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
Bsh1285I CGRYCG 2 cut(s) 163, 1540
BshFI GGCC 8 cut(s) 209, 367, 389, 580, 809, 1023, 1550, 1712
BshNI GGYRCC 4 cut(s) 465, 782, 1213, 1296
BshTI ACCGGT 2 cut(s) 779, 1216
BsiEI CGRYCG 2 cut(s) 163, 1540
BsiHKAI GWGCWC 3 cut(s) 884, 1825, 1950
BsiHKCI CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
BslFI GGGAC 4 cut(s) 286, 815, 1745, 1841
BsmAI GTCTC 4 cut(s) 1085, 1225, 1425, 1586
BsmFI GGGAC 4 cut(s) 286, 815, 1745, 1841
BsmI GAATGC 2 cut(s) 526, 901
BsnI GGCC 8 cut(s) 209, 367, 389, 580, 809, 1023, 1550, 1712
Bso31I GGTCTC 2 cut(s) 1085, 1225
BsoBI CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
Bsp1286I GDGCHC 4 cut(s) 884, 1609, 1825, 1950
Bsp1720I GCTNAGC 1 cut(s) 1761
Bsp19I CCATGG 2 cut(s) 1083, 1862
Bsp68I TCGCGA 1 cut(s) 53
BspANI GGCC 8 cut(s) 209, 367, 389, 580, 809, 1023, 1550, 1712
BspCNI CTCAG 1 cut(s) 1789
BspFNI CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
BspHI TCATGA 1 cut(s) 1989
BspMAI CTGCAG 1 cut(s) 1177
BspMI ACCTGC 1 cut(s) 1675
BspPI GGATC 6 cut(s) 124, 205, 1127, 1347, 1360, 1899
BspT107I GGYRCC 4 cut(s) 465, 782, 1213, 1296
BspTNI GGTCTC 2 cut(s) 1085, 1225
BsrBI CCGCTC 1 cut(s) 1729
BsrDI GCAATG 2 cut(s) 1262, 1950
BsrFI RCCGGY 3 cut(s) 779, 1216, 1334
BsrI ACTGG 5 cut(s) 127, 138, 430, 1104, 1356
BssAI RCCGGY 3 cut(s) 779, 1216, 1334
BssNAI GTATAC 2 cut(s) 258, 1332
BssNI GRCGYC 2 cut(s) 1035, 1179
BssSI CACGAG 2 cut(s) 422, 1913
BssT1I CCWWGG 8 cut(s) 99, 251, 439, 919, 1057, 1083, 1551, 1862
Bst1107I GTATAC 2 cut(s) 258, 1332
Bst2BI CACGAG 2 cut(s) 422, 1913
Bst2UI CCWGG 5 cut(s) 806, 1025, 1272, 1386, 1886
Bst4CI ACNGT 5 cut(s) 223, 277, 474, 542, 649
Bst6I CTCTTC 5 cut(s) 947, 1083, 1358, 1616, 1803
BstACI GRCGYC 2 cut(s) 1035, 1179
BstC8I GCNNGC 3 cut(s) 1548, 1605, 1636
BstDEI CTNAG 5 cut(s) 7, 362, 1511, 1761, 1797
BstDSI CCRYGG 3 cut(s) 1083, 1862, 1902
BstF5I GGATG 8 cut(s) 90, 382, 492, 894, 935, 997, 1209, 1348
BstFNI CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
BstH2I RGCGCY 2 cut(s) 419, 950
BstHHI GCGC 3 cut(s) 418, 602, 949
BstMAI GTCTC 4 cut(s) 1085, 1225, 1425, 1586
BstMCI CGRYCG 2 cut(s) 163, 1540
BstMWI GCNNNNNNNGC 7 cut(s) 143, 398, 457, 931, 1456, 1507, 1631
BstNI CCWGG 5 cut(s) 806, 1025, 1272, 1386, 1886
BstNSI RCATGY 1 cut(s) 694
BstPAI GACNNNNGTC 2 cut(s) 1154, 1393
BstSFI CTRYAG 3 cut(s) 470, 1173, 1845
BstSLI GKGCMC 1 cut(s) 1609
BstUI CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
BstV1I GCAGC 7 cut(s) 405, 444, 1159, 1174, 1471, 1777, 1954
BstV2I GAAGAC 1 cut(s) 1038
BstX2I RGATCY 4 cut(s) 10, 197, 315, 1352
BstYI RGATCY 4 cut(s) 10, 197, 315, 1352
BstZ17I GTATAC 2 cut(s) 258, 1332
BsuI GTATCC 1 cut(s) 103
BsuRI GGCC 8 cut(s) 209, 367, 389, 580, 809, 1023, 1550, 1712
BtgI CCRYGG 3 cut(s) 1083, 1862, 1902
BtgZI GCGATG 1 cut(s) 1269
BtsCI GGATG 8 cut(s) 90, 382, 492, 894, 935, 997, 1209, 1348
BtsIMutI CAGTG 2 cut(s) 1107, 1363
BtuMI TCGCGA 1 cut(s) 53
BveI ACCTGC 1 cut(s) 1675
Cac8I GCNNGC 3 cut(s) 1548, 1605, 1636
CaiI CAGNNNCTG 2 cut(s) 478, 1853
CciI TCATGA 1 cut(s) 1989
CfoI GCGC 3 cut(s) 418, 602, 949
Cfr10I RCCGGY 3 cut(s) 779, 1216, 1334
Cfr13I GGNCC 9 cut(s) 208, 273, 613, 802, 1021, 1080, 1388, 1503, 1548
Cfr9I CCCGGG 4 cut(s) 290, 403, 846, 1587
CseI GACGC 3 cut(s) 359, 1043, 1763
CsiI ACCWGGT 1 cut(s) 1270
Csp6I GTAC 9 cut(s) 124, 605, 619, 645, 783, 1214, 1474, 1621, 1930
CspAI ACCGGT 2 cut(s) 779, 1216
CspCI CAANNNNNGTGG 2 cut(s) 557, 592
CviQI GTAC 9 cut(s) 124, 605, 619, 645, 783, 1214, 1474, 1621, 1930
DdeI CTNAG 5 cut(s) 7, 362, 1511, 1761, 1797
DriI GACNNNNNGTC 1 cut(s) 1060
EaeI YGGCCR 1 cut(s) 387
Eam1104I CTCTTC 5 cut(s) 947, 1083, 1358, 1616, 1803
Eam1105I GACNNNNNGTC 1 cut(s) 1060
EarI CTCTTC 5 cut(s) 947, 1083, 1358, 1616, 1803
EciI GGCGGA 1 cut(s) 730
Ecl136II GAGCTC 2 cut(s) 882, 1948
Eco130I CCWWGG 8 cut(s) 99, 251, 439, 919, 1057, 1083, 1551, 1862
Eco147I AGGCCT 2 cut(s) 367, 809
Eco24I GRGCYC 2 cut(s) 884, 1950
Eco31I GGTCTC 2 cut(s) 1085, 1225
Eco32I GATATC 1 cut(s) 49
Eco47I GGWCC 6 cut(s) 273, 613, 802, 1080, 1388, 1503
Eco53kI GAGCTC 2 cut(s) 882, 1948
Eco57I CTGAAG 4 cut(s) 266, 353, 1158, 1676
Eco88I CYCGRG 6 cut(s) 233, 290, 403, 846, 1587, 1824
EcoICRI GAGCTC 2 cut(s) 882, 1948
EcoO109I RGGNCCY 2 cut(s) 208, 613
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 5 cut(s) 804, 1023, 1270, 1384, 1884
EcoRV GATATC 1 cut(s) 49
EcoT14I CCWWGG 8 cut(s) 99, 251, 439, 919, 1057, 1083, 1551, 1862
EcoT38I GRGCYC 2 cut(s) 884, 1950
ErhI CCWWGG 8 cut(s) 99, 251, 439, 919, 1057, 1083, 1551, 1862
FalI AAGNNNNNCTT 4 cut(s) 302, 334, 1023, 1055
FaqI GGGAC 4 cut(s) 286, 815, 1745, 1841
FauI CCCGC 6 cut(s) 172, 634, 1108, 1539, 1596, 1722
FblI GTMKAC 3 cut(s) 257, 1053, 1331
FokI GGATG 8 cut(s) 97, 389, 499, 881, 942, 1004, 1216, 1355
FriOI GRGCYC 2 cut(s) 884, 1950
FspBI CTAG 8 cut(s) 14, 252, 663, 680, 734, 920, 926, 1058
GlaI GCGC 3 cut(s) 417, 601, 948
GsaI CCCAGC 2 cut(s) 741, 1342
GsuI CTGGAG 3 cut(s) 1121, 1739, 1907
HaeII RGCGCY 2 cut(s) 419, 950
HaeIII GGCC 8 cut(s) 209, 367, 389, 580, 809, 1023, 1550, 1712
HgaI GACGC 3 cut(s) 359, 1043, 1763
HhaI GCGC 3 cut(s) 418, 602, 949
Hin1I GRCGYC 2 cut(s) 1035, 1179
Hin6I GCGC 3 cut(s) 416, 600, 947
HinP1I GCGC 3 cut(s) 416, 600, 947
HincII GTYRAC 2 cut(s) 513, 1054
HindII GTYRAC 2 cut(s) 513, 1054
HphI GGTGA 9 cut(s) 194, 492, 661, 1286, 1336, 1373, 1699, 1799, 1825
Hpy166II GTNNAC 5 cut(s) 258, 513, 1054, 1332, 1621
Hpy188I TCNGA 6 cut(s) 39, 94, 823, 1656, 1798, 1834
Hpy188III TCNNGA 9 cut(s) 44, 52, 164, 233, 1136, 1186, 1826, 1973, 1990
Hpy8I GTNNAC 5 cut(s) 258, 513, 1054, 1332, 1621
Hpy99I CGWCG 2 cut(s) 287, 1402
HpyCH4III ACNGT 5 cut(s) 223, 277, 474, 542, 649
HpyCH4IV ACGT 2 cut(s) 1179, 1328
HpyCH4V TGCA 4 cut(s) 421, 1162, 1175, 1699
HpyF10VI GCNNNNNNNGC 7 cut(s) 143, 398, 457, 931, 1456, 1507, 1631
HpyF3I CTNAG 5 cut(s) 7, 362, 1511, 1761, 1797
HpySE526I ACGT 2 cut(s) 1179, 1328
Hsp92I GRCGYC 2 cut(s) 1035, 1179
HspAI GCGC 3 cut(s) 416, 600, 947
KpnI GGTACC 2 cut(s) 786, 1217
LmnI GCTCC 7 cut(s) 358, 879, 939, 1147, 1251, 1726, 1777
Lsp1109I GCAGC 7 cut(s) 405, 444, 1159, 1174, 1471, 1777, 1954
LweI GCATC 4 cut(s) 477, 1102, 1590, 1621
MabI ACCWGGT 1 cut(s) 1270
MaeI CTAG 8 cut(s) 14, 252, 663, 680, 734, 920, 926, 1058
MaeII ACGT 2 cut(s) 1179, 1328
MaeIII GTNAC 7 cut(s) 217, 498, 649, 682, 1147, 1324, 1514
MbiI CCGCTC 1 cut(s) 1729
MflI RGATCY 4 cut(s) 10, 197, 315, 1352
MhlI GDGCHC 4 cut(s) 884, 1609, 1825, 1950
MluCI AATT 3 cut(s) 228, 593, 753
MlyI GAGTC 5 cut(s) 179, 1403, 1727, 1823, 1859
MroXI GAANNNNTTC 1 cut(s) 431
MseI TTAA 2 cut(s) 756, 1347
MslI CAYNNNNRTG 3 cut(s) 1047, 1308, 1955
MspA1I CMGCKG 2 cut(s) 457, 1462
Mva1269I GAATGC 2 cut(s) 526, 901
MvaI CCWGG 5 cut(s) 806, 1025, 1272, 1386, 1886
MvnI CGCG 6 cut(s) 53, 353, 392, 602, 1625, 1757
MwoI GCNNNNNNNGC 7 cut(s) 143, 398, 457, 931, 1456, 1507, 1631
NcoI CCATGG 2 cut(s) 1083, 1862
NmeAIII GCCGAG 1 cut(s) 1771
NmuCI GTSAC 6 cut(s) 217, 498, 649, 1147, 1324, 1514
NruI TCGCGA 1 cut(s) 53
NspI RCATGY 1 cut(s) 694
OliI CACNNNNGTG 1 cut(s) 1308
PagI TCATGA 1 cut(s) 1989
PaqCI CACCTGC 1 cut(s) 1675
PceI AGGCCT 2 cut(s) 367, 809
PcsI WCGNNNNNNNCGW 1 cut(s) 119
PctI GAATGC 2 cut(s) 526, 901
PdmI GAANNNNTTC 1 cut(s) 431
PfeI GAWTC 7 cut(s) 40, 89, 394, 891, 1573, 1592, 1770
PflMI CCANNNNNTGG 1 cut(s) 1863
PinAI ACCGGT 2 cut(s) 779, 1216
Ple19I CGATCG 1 cut(s) 163
PleI GAGTC 5 cut(s) 178, 1402, 1727, 1823, 1858
PpsI GAGTC 5 cut(s) 178, 1402, 1727, 1823, 1858
PpuMI RGGWCCY 1 cut(s) 613
PshAI GACNNNNGTC 2 cut(s) 1154, 1393
Psp124BI GAGCTC 2 cut(s) 884, 1950
Psp5II RGGWCCY 1 cut(s) 613
Psp6I CCWGG 5 cut(s) 804, 1023, 1270, 1384, 1884
PspFI CCCAGC 2 cut(s) 737, 1338
PspGI CCWGG 5 cut(s) 804, 1023, 1270, 1384, 1884
PspPI GGNCC 9 cut(s) 208, 273, 613, 802, 1021, 1080, 1388, 1503, 1548
PspPPI RGGWCCY 1 cut(s) 613
PstI CTGCAG 1 cut(s) 1177
PstNI CAGNNNCTG 2 cut(s) 478, 1853
PsuI RGATCY 4 cut(s) 10, 197, 315, 1352
PvuI CGATCG 1 cut(s) 163
PvuII CAGCTG 1 cut(s) 1462
RruI TCGCGA 1 cut(s) 53
RsaI GTAC 9 cut(s) 125, 606, 620, 646, 784, 1215, 1475, 1622, 1931
RsaNI GTAC 9 cut(s) 124, 605, 619, 645, 783, 1214, 1474, 1621, 1930
RseI CAYNNNNRTG 3 cut(s) 1047, 1308, 1955
SacI GAGCTC 2 cut(s) 884, 1950
SalI GTCGAC 1 cut(s) 1052
SaqAI TTAA 2 cut(s) 756, 1347
Sau96I GGNCC 9 cut(s) 208, 273, 613, 802, 1021, 1080, 1388, 1503, 1548
SchI GAGTC 5 cut(s) 179, 1403, 1727, 1823, 1859
SduI GDGCHC 4 cut(s) 884, 1609, 1825, 1950
SexAI ACCWGGT 1 cut(s) 1270
SfaNI GCATC 4 cut(s) 477, 1102, 1590, 1621
SfcI CTRYAG 3 cut(s) 470, 1173, 1845
SinI GGWCC 6 cut(s) 273, 613, 802, 1080, 1388, 1503
SmaI CCCGGG 4 cut(s) 292, 405, 848, 1589
SmiMI CAYNNNNRTG 3 cut(s) 1047, 1308, 1955
SmlI CTYRAG 4 cut(s) 371, 622, 1781, 1971
SmoI CTYRAG 4 cut(s) 371, 622, 1781, 1971
SpeI ACTAGT 1 cut(s) 679
Sse9I AATT 3 cut(s) 228, 593, 753
SseBI AGGCCT 2 cut(s) 367, 809
SspMI CTAG 8 cut(s) 14, 252, 663, 680, 734, 920, 926, 1058
SstI GAGCTC 2 cut(s) 884, 1950
StuI AGGCCT 2 cut(s) 367, 809
StyI CCWWGG 8 cut(s) 99, 251, 439, 919, 1057, 1083, 1551, 1862
TaaI ACNGT 5 cut(s) 223, 277, 474, 542, 649
TaiI ACGT 2 cut(s) 1182, 1331
TaqI TCGA 5 cut(s) 529, 701, 1053, 1064, 1536
TaqII GACCGA 1 cut(s) 1068
TasI AATT 3 cut(s) 228, 593, 753
TatI WGTACW 2 cut(s) 618, 1929
TauI GCSGC 3 cut(s) 392, 662, 1760
TfiI GAWTC 7 cut(s) 40, 89, 394, 891, 1573, 1592, 1770
Tru1I TTAA 2 cut(s) 756, 1347
Tru9I TTAA 2 cut(s) 756, 1347
TscAI CASTG 2 cut(s) 1114, 1363
TseFI GTSAC 6 cut(s) 217, 498, 649, 1147, 1324, 1514
TseI GCWGC 7 cut(s) 418, 457, 1162, 1172, 1459, 1765, 1967
Tsp45I GTSAC 6 cut(s) 217, 498, 649, 1147, 1324, 1514
TspDTI ATGAA 5 cut(s) 323, 606, 883, 1503, 2006
TspGWI ACGGA 1 cut(s) 1213
TspMI CCCGGG 4 cut(s) 290, 403, 846, 1587
TspRI CASTG 2 cut(s) 1114, 1363
Van91I CCANNNNNTGG 1 cut(s) 1863
VpaK11BI GGWCC 6 cut(s) 273, 613, 802, 1080, 1388, 1503
XapI RAATTY 1 cut(s) 593
XceI RCATGY 1 cut(s) 694
XmaI CCCGGG 4 cut(s) 290, 403, 846, 1587
XmaJI CCTAGG 3 cut(s) 251, 919, 1057
XmiI GTMKAC 3 cut(s) 257, 1053, 1331
XmnI GAANNNNTTC 1 cut(s) 431
XspI CTAG 8 cut(s) 14, 252, 663, 680, 734, 920, 926, 1058
ZraI GACGTC 1 cut(s) 1180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.