Rmu_sc0001866.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001866.1
OG0000087
Physical Location & Seq
Reverse (-)
61376 .. 63640
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001866.1_g000011.1.cds

Sequence Viewer

Length: 1755 bp
atggaatcagaagccagggttggggatacgggatcgtcgtaccagtcctctgccaggcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcagagagtagtggggagtccgacgagggtgagagtgagggtggatctgcggaggctccggtagtcacagtggccattcccgagggcattcctaagccgaggtacacgcttggggacgggaccgtatgcgatgaacctgggagaagcatgacgatgaaggagatcgtggacatgcggctgaagtgggggataccggacgcggtagagcttaggccacttagggatggggagttggcggcgaatcctgccccgggctgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctaccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggcagctgaccccgaatgctgtccgccaaatatatagtatgatggctatgtgggacctgtgccagcaagggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccactagttaccgatatgcctacctcgatgagcaaaagggggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgatcggtacctttcaagctatcggggatcagtcctatacgctgtcggaagtggaaaagaagaggatagcccgggtatacgccgtgtggtcggagaaggagaggagctcttatagattcatccggcactctatactctttaggctagggttagggtggctccccgtgaaagccccgaagaggaaaccccagaaaggcaaggaggaggacaagatggatgacgctcagctgatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctggggtcgaaaggcacgagtcggtccattgaagagacccttttagagataactgatgagggatacggtgaacctgatcccgacgctcctgtggccaaccccgtgcagccctccatggccgacataattatgattgatgacaccggcatgggaaaagtaccggcctctatgcctatctcttctcgctccaatgggagcgatgaggcgctactccccgggccgtcaccttcccttagtctgttatctcccgtcgttccggtaatccctaagaagcccatcaagcagctgctgaacgaatacgaggtcgctgatgaaaagttcgtgcggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcacccgggaatcgatgatgcgggcactctttaatgtgtacgccatcgacgccagtgaggaggacactcacctgaaggaggaggttagcaatctttccgggcaggctgagatggccgcctctaagcagcggattgctgatcttgagggcgaggttgttgaggcgagggaggaggtgaagaatgcccgggactccgagaagaaggctgcagagtctgcctttaaggagtgggtggcggccgggtatctagatgaggccaaattcaggcggggtctcctggagaaaaagaagaaagagcgggaggcggcgggcaagtctggtgccggcgggtctcagagtaccgatggggatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

584

Amino Acids

64.37

Weight (kDa)

5.15

Isoelectric Point (pI)

47.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 987
Acc65I GGTACC 2 cut(s) 81, 716
AccB1I GGYRCC 4 cut(s) 81, 450, 716, 1715
AccBSI CCGCTC 1 cut(s) 1693
AccI GTMKAC 3 cut(s) 96, 786, 987
AccII CGCG 1 cut(s) 338
AclWI GGATC 6 cut(s) 40, 190, 744, 1061, 1338, 1752
AcoI YGGCCR 5 cut(s) 210, 1083, 1107, 1509, 1632
AcsI RAATTY 1 cut(s) 1655
AcuI CTGAAG 4 cut(s) 84, 338, 1355, 1490
AcyI GRCGYC 2 cut(s) 984, 1446
AfaI GTAC 8 cut(s) 41, 83, 242, 580, 718, 1149, 1436, 1735
AgeI ACCGGT 1 cut(s) 78
AgsI TTSAA 2 cut(s) 725, 1022
AhdI GACNNNNNGTC 1 cut(s) 994
AhlI ACTAGT 1 cut(s) 613
AjnI CCWGG 7 cut(s) 14, 53, 274, 957, 990, 1380, 1671
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 1 cut(s) 818
Alw26I GTCTC 4 cut(s) 1019, 1400, 1673, 1731
AlwI GGATC 6 cut(s) 40, 190, 744, 1061, 1338, 1752
AlwNI CAGNNNCTG 3 cut(s) 463, 1279, 1610
Ama87I CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
ApeKI GCWGC 9 cut(s) 403, 466, 493, 706, 1096, 1273, 1276, 1522, 1601
ApoI RAATTY 1 cut(s) 1655
ArsI GACNNNNNNTTYG 2 cut(s) 1278, 1310
AsiGI ACCGGT 1 cut(s) 78
Asp718I GGTACC 2 cut(s) 81, 716
AspA2I CCTAGG 1 cut(s) 85
AspLEI GCGC 2 cut(s) 403, 1198
AspS9I GGNCC 6 cut(s) 120, 258, 544, 1014, 1208, 1317
AsuHPI GGTGA 8 cut(s) 179, 477, 595, 1070, 1206, 1390, 1457, 1582
AvaI CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
AvaII GGWCC 5 cut(s) 120, 258, 544, 1014, 1317
AvrII CCTAGG 1 cut(s) 85
BaeGI GKGCMC 1 cut(s) 1423
BalI TGGCCA 2 cut(s) 212, 1085
BanI GGYRCC 4 cut(s) 81, 450, 716, 1715
BanII GRGCYC 1 cut(s) 818
BauI CACGAG 2 cut(s) 407, 1006
Bbv12I GWGCWC 1 cut(s) 818
BbvI GCAGC 9 cut(s) 390, 453, 505, 718, 1108, 1263, 1285, 1534, 1588
BccI CCATC 8 cut(s) 356, 526, 916, 934, 1274, 1448, 1501, 1733
BceAI ACGGC 3 cut(s) 776, 1195, 1377
BciT130I CCWGG 7 cut(s) 16, 55, 276, 959, 992, 1382, 1673
BciVI GTATCC 3 cut(s) 19, 321, 1046
BcoDI GTCTC 4 cut(s) 1019, 1400, 1673, 1731
BcuI ACTAGT 1 cut(s) 613
BfaI CTAG 6 cut(s) 86, 597, 614, 668, 854, 1643
BfmI CTRYAG 2 cut(s) 455, 1602
BfoI RGCGCY 2 cut(s) 404, 1199
BfuI GTATCC 3 cut(s) 19, 321, 1046
BlnI CCTAGG 1 cut(s) 85
BlpI GCTNAGC 1 cut(s) 933
Bme18I GGWCC 5 cut(s) 120, 258, 544, 1014, 1317
BmeRI GACNNNNNGTC 1 cut(s) 994
BmeT110I CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
BmgT120I GGNCC 6 cut(s) 120, 258, 544, 1014, 1208, 1317
BmiI GGNNCC 9 cut(s) 83, 121, 195, 259, 452, 545, 718, 869, 1717
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 3 cut(s) 462, 958, 1404
BmuI ACTGGG 1 cut(s) 138
BplI GAGNNNNNCTC 2 cut(s) 800, 832
BpmI CTGGAG 1 cut(s) 1694
Bpu10I CCTNAGC 2 cut(s) 231, 347
Bpu1102I GCTNAGC 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1559
Bsa29I ATCGAT 1 cut(s) 1409
BsaBI GATNNNNATC 1 cut(s) 1743
BsaHI GRCGYC 2 cut(s) 984, 1446
BsaI GGTCTC 3 cut(s) 1019, 1673, 1731
BsaWI WCCGGW 4 cut(s) 78, 196, 331, 1246
Bse118I RCCGGY 4 cut(s) 78, 1133, 1150, 1718
Bse1I ACTGG 3 cut(s) 43, 133, 1449
Bse8I GATNNNNATC 1 cut(s) 1743
BseBI CCWGG 7 cut(s) 16, 55, 276, 959, 992, 1382, 1673
BseCI ATCGAT 1 cut(s) 1409
BseGI GGATG 4 cut(s) 367, 477, 828, 931
BseJI GATNNNNATC 1 cut(s) 1743
BseMII CTCAG 4 cut(s) 153, 947, 1494, 1742
BseNI ACTGG 3 cut(s) 43, 133, 1449
BseRI GAGGAG 5 cut(s) 826, 926, 1469, 1490, 1580
BseSI GKGCMC 1 cut(s) 1423
BseX3I CGGCCG 1 cut(s) 1632
BseXI GCAGC 9 cut(s) 390, 453, 505, 718, 1108, 1263, 1285, 1534, 1588
BseYI CCCAGC 1 cut(s) 393
BsgI GTGCAG 3 cut(s) 389, 959, 1115
Bsh1236I CGCG 1 cut(s) 338
Bsh1285I CGRYCG 3 cut(s) 79, 1354, 1635
BshNI GGYRCC 4 cut(s) 81, 450, 716, 1715
BshTI ACCGGT 1 cut(s) 78
BshVI ATCGAT 1 cut(s) 1409
BsiEI CGRYCG 3 cut(s) 79, 1354, 1635
BsiHKAI GWGCWC 1 cut(s) 818
BsiHKCI CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
BslFI GGGAC 4 cut(s) 266, 271, 557, 1598
BsmAI GTCTC 4 cut(s) 1019, 1400, 1673, 1731
BsmBI CGTCTC 1 cut(s) 1400
BsmFI GGGAC 4 cut(s) 266, 271, 557, 1598
BsmI GAATGC 3 cut(s) 225, 511, 1582
Bso31I GGTCTC 3 cut(s) 1019, 1673, 1731
BsoBI CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
Bsp1286I GDGCHC 2 cut(s) 818, 1423
Bsp143I GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
Bsp1720I GCTNAGC 1 cut(s) 933
Bsp19I CCATGG 1 cut(s) 1104
BspCNI CTCAG 4 cut(s) 152, 946, 1495, 1741
BspDI ATCGAT 1 cut(s) 1409
BspFNI CGCG 1 cut(s) 338
BspLI GGNNCC 9 cut(s) 83, 121, 195, 259, 452, 545, 718, 869, 1717
BspMAI CTGCAG 1 cut(s) 1606
BspPI GGATC 6 cut(s) 40, 190, 744, 1061, 1338, 1752
BspT107I GGYRCC 4 cut(s) 81, 450, 716, 1715
BspTNI GGTCTC 3 cut(s) 1019, 1673, 1731
BsrBI CCGCTC 1 cut(s) 1693
BsrFI RCCGGY 4 cut(s) 78, 1133, 1150, 1718
BsrI ACTGG 3 cut(s) 43, 133, 1449
BssAI RCCGGY 4 cut(s) 78, 1133, 1150, 1718
BssMI GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
BssNAI GTATAC 1 cut(s) 787
BssNI GRCGYC 2 cut(s) 984, 1446
BssSI CACGAG 2 cut(s) 407, 1006
BssT1I CCWWGG 3 cut(s) 85, 424, 1104
Bst1107I GTATAC 1 cut(s) 787
Bst2BI CACGAG 2 cut(s) 407, 1006
Bst2UI CCWGG 7 cut(s) 16, 55, 276, 959, 992, 1382, 1673
Bst4CI ACNGT 5 cut(s) 208, 262, 459, 583, 1058
Bst6I CTCTTC 4 cut(s) 764, 881, 1017, 1174
BstACI GRCGYC 2 cut(s) 984, 1446
BstAPI GCANNNNNTGC 1 cut(s) 1610
BstC8I GCNNGC 6 cut(s) 60, 554, 1419, 1500, 1705, 1720
BstDSI CCRYGG 1 cut(s) 1104
BstEII GGTNACC 1 cut(s) 583
BstENI CCTNNNNNAGG 2 cut(s) 52, 1472
BstF5I GGATG 4 cut(s) 367, 477, 828, 931
BstFNI CGCG 1 cut(s) 338
BstH2I RGCGCY 2 cut(s) 404, 1199
BstHHI GCGC 2 cut(s) 403, 1198
BstKTI GATC 9 cut(s) 35, 185, 303, 714, 739, 1069, 1333, 1537, 1747
BstMAI GTCTC 4 cut(s) 1019, 1400, 1673, 1731
BstMBI GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
BstMCI CGRYCG 3 cut(s) 79, 1354, 1635
BstNI CCWGG 7 cut(s) 16, 55, 276, 959, 992, 1382, 1673
BstNSI RCATGY 2 cut(s) 313, 949
BstPI GGTNACC 1 cut(s) 583
BstSFI CTRYAG 2 cut(s) 455, 1602
BstSLI GKGCMC 1 cut(s) 1423
BstUI CGCG 1 cut(s) 338
BstV1I GCAGC 9 cut(s) 390, 453, 505, 718, 1108, 1263, 1285, 1534, 1588
BstX2I RGATCY 2 cut(s) 182, 1330
BstYI RGATCY 2 cut(s) 182, 1330
BstZ17I GTATAC 1 cut(s) 787
BstZI CGGCCG 1 cut(s) 1632
Bsu15I ATCGAT 1 cut(s) 1409
BsuI GTATCC 3 cut(s) 19, 321, 1046
BsuTUI ATCGAT 1 cut(s) 1409
BtgI CCRYGG 1 cut(s) 1104
BtgZI GCGATG 2 cut(s) 282, 1203
BtsCI GGATG 4 cut(s) 367, 477, 828, 931
BtsIMutI CAGTG 2 cut(s) 213, 1456
Cac8I GCNNGC 6 cut(s) 60, 554, 1419, 1500, 1705, 1720
CaiI CAGNNNCTG 3 cut(s) 463, 1279, 1610
CfoI GCGC 2 cut(s) 403, 1198
Cfr10I RCCGGY 4 cut(s) 78, 1133, 1150, 1718
Cfr13I GGNCC 6 cut(s) 120, 258, 544, 1014, 1208, 1317
Cfr9I CCCGGG 5 cut(s) 388, 780, 1205, 1401, 1581
ClaI ATCGAT 1 cut(s) 1409
CseI GACGC 4 cut(s) 344, 938, 1082, 1454
Csp6I GTAC 8 cut(s) 40, 82, 241, 579, 717, 1148, 1435, 1734
CspAI ACCGGT 1 cut(s) 78
CviAII CATG 6 cut(s) 286, 310, 946, 1105, 1138, 1321
CviQI GTAC 8 cut(s) 40, 82, 241, 579, 717, 1148, 1435, 1734
DpnI GATC 9 cut(s) 34, 184, 302, 713, 738, 1068, 1332, 1536, 1746
DpnII GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
DriI GACNNNNNGTC 1 cut(s) 994
EaeI YGGCCR 5 cut(s) 210, 1083, 1107, 1509, 1632
EagI CGGCCG 1 cut(s) 1632
Eam1104I CTCTTC 4 cut(s) 764, 881, 1017, 1174
Eam1105I GACNNNNNGTC 1 cut(s) 994
EarI CTCTTC 4 cut(s) 764, 881, 1017, 1174
EciI GGCGGA 1 cut(s) 503
Ecl136II GAGCTC 1 cut(s) 816
EclXI CGGCCG 1 cut(s) 1632
Eco130I CCWWGG 3 cut(s) 85, 424, 1104
Eco24I GRGCYC 1 cut(s) 818
Eco31I GGTCTC 3 cut(s) 1019, 1673, 1731
Eco32I GATATC 1 cut(s) 1342
Eco47I GGWCC 5 cut(s) 120, 258, 544, 1014, 1317
Eco52I CGGCCG 1 cut(s) 1632
Eco53kI GAGCTC 1 cut(s) 816
Eco57I CTGAAG 4 cut(s) 84, 338, 1355, 1490
Eco88I CYCGRG 6 cut(s) 218, 388, 780, 1205, 1401, 1581
Eco91I GGTNACC 1 cut(s) 583
EcoICRI GAGCTC 1 cut(s) 816
EcoNI CCTNNNNNAGG 2 cut(s) 52, 1472
EcoO109I RGGNCCY 2 cut(s) 120, 544
EcoO65I GGTNACC 1 cut(s) 583
EcoRII CCWGG 7 cut(s) 14, 53, 274, 957, 990, 1380, 1671
EcoRV GATATC 1 cut(s) 1342
EcoT14I CCWWGG 3 cut(s) 85, 424, 1104
EcoT38I GRGCYC 1 cut(s) 818
ErhI CCWWGG 3 cut(s) 85, 424, 1104
Esp3I CGTCTC 1 cut(s) 1400
FaeI CATG 6 cut(s) 289, 313, 949, 1108, 1141, 1324
FalI AAGNNNNNCTT 2 cut(s) 1014, 1046
FaqI GGGAC 4 cut(s) 266, 271, 557, 1598
FatI CATG 6 cut(s) 285, 309, 945, 1104, 1137, 1320
FauI CCCGC 6 cut(s) 568, 1410, 1656, 1686, 1696, 1715
FblI GTMKAC 3 cut(s) 96, 786, 987
FokI GGATG 4 cut(s) 374, 484, 815, 938
FriOI GRGCYC 1 cut(s) 818
FspBI CTAG 6 cut(s) 86, 597, 614, 668, 854, 1643
GlaI GCGC 2 cut(s) 402, 1197
GsaI CCCAGC 1 cut(s) 397
GsuI CTGGAG 1 cut(s) 1694
HaeII RGCGCY 2 cut(s) 404, 1199
HgaI GACGC 4 cut(s) 344, 938, 1082, 1454
HhaI GCGC 2 cut(s) 403, 1198
Hin1I GRCGYC 2 cut(s) 984, 1446
Hin1II CATG 6 cut(s) 289, 313, 949, 1108, 1141, 1324
Hin6I GCGC 2 cut(s) 401, 1196
HinP1I GCGC 2 cut(s) 401, 1196
HincII GTYRAC 1 cut(s) 988
HindII GTYRAC 1 cut(s) 988
HphI GGTGA 8 cut(s) 179, 477, 595, 1070, 1206, 1390, 1457, 1582
Hpy166II GTNNAC 8 cut(s) 70, 97, 243, 307, 787, 988, 1061, 1435
Hpy188I TCNGA 8 cut(s) 10, 142, 160, 757, 802, 1335, 1591, 1731
Hpy188III TCNNGA 4 cut(s) 218, 1070, 1538, 1643
Hpy8I GTNNAC 8 cut(s) 70, 97, 243, 307, 787, 988, 1061, 1435
Hpy99I CGWCG 7 cut(s) 40, 164, 986, 989, 1076, 1244, 1448
HpyAV CCTTC 6 cut(s) 289, 799, 1227, 1330, 1465, 1591
HpyCH4III ACNGT 5 cut(s) 208, 262, 459, 583, 1058
HpyCH4IV ACGT 1 cut(s) 984
HpyCH4V TGCA 4 cut(s) 406, 976, 1096, 1604
HpySE526I ACGT 1 cut(s) 984
Hsp92I GRCGYC 2 cut(s) 984, 1446
Hsp92II CATG 6 cut(s) 289, 313, 949, 1108, 1141, 1324
HspAI GCGC 2 cut(s) 401, 1196
KpnI GGTACC 2 cut(s) 85, 720
KroI GCCGGC 1 cut(s) 1718
KroNI GCCGGC 1 cut(s) 1720
Kzo9I GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
LmnI GCTCC 7 cut(s) 199, 423, 813, 873, 1081, 1181, 1185
Lsp1109I GCAGC 9 cut(s) 390, 453, 505, 718, 1108, 1263, 1285, 1534, 1588
LweI GCATC 3 cut(s) 462, 958, 1404
MaeI CTAG 6 cut(s) 86, 597, 614, 668, 854, 1643
MaeII ACGT 1 cut(s) 984
MaeIII GTNAC 5 cut(s) 202, 483, 583, 616, 1212
MalI GATC 9 cut(s) 34, 184, 302, 713, 738, 1068, 1332, 1536, 1746
MbiI CCGCTC 1 cut(s) 1693
MboI GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
MboII GAAGA 8 cut(s) 781, 898, 977, 1034, 1161, 1585, 1606, 1696
MflI RGATCY 2 cut(s) 182, 1330
MhlI GDGCHC 2 cut(s) 818, 1423
MlsI TGGCCA 2 cut(s) 212, 1085
MluCI AATT 3 cut(s) 101, 1116, 1655
MluNI TGGCCA 2 cut(s) 212, 1085
MlyI GAGTC 4 cut(s) 164, 1018, 1580, 1616
MmeI TCCRAC 3 cut(s) 183, 735, 780
Mox20I TGGCCA 2 cut(s) 212, 1085
MroNI GCCGGC 1 cut(s) 1718
MscI TGGCCA 2 cut(s) 212, 1085
MseI TTAA 2 cut(s) 1428, 1617
MslI CAYNNNNRTG 4 cut(s) 290, 950, 1118, 1136
Msp20I TGGCCA 2 cut(s) 212, 1085
MspA1I CMGCKG 5 cut(s) 496, 709, 937, 1276, 1525
Mva1269I GAATGC 3 cut(s) 225, 511, 1582
MvaI CCWGG 7 cut(s) 16, 55, 276, 959, 992, 1382, 1673
MvnI CGCG 1 cut(s) 338
NaeI GCCGGC 1 cut(s) 1720
NcoI CCATGG 1 cut(s) 1104
NdeII GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
NgoMIV GCCGGC 1 cut(s) 1718
NlaIII CATG 6 cut(s) 289, 313, 949, 1108, 1141, 1324
NlaIV GGNNCC 9 cut(s) 83, 121, 195, 259, 452, 545, 718, 869, 1717
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 4 cut(s) 202, 483, 583, 1212
NspI RCATGY 2 cut(s) 313, 949
PcsI WCGNNNNNNNCGW 3 cut(s) 35, 122, 1004
PctI GAATGC 3 cut(s) 225, 511, 1582
PdiI GCCGGC 1 cut(s) 1720
PfeI GAWTC 6 cut(s) 5, 379, 412, 825, 1387, 1406
PfoI TCCNGGA 1 cut(s) 1671
PinAI ACCGGT 1 cut(s) 78
PleI GAGTC 4 cut(s) 163, 1017, 1580, 1615
PpsI GAGTC 4 cut(s) 163, 1017, 1580, 1615
PpuMI RGGWCCY 2 cut(s) 120, 544
Psp124BI GAGCTC 1 cut(s) 818
Psp5II RGGWCCY 2 cut(s) 120, 544
Psp6I CCWGG 7 cut(s) 14, 53, 274, 957, 990, 1380, 1671
PspEI GGTNACC 1 cut(s) 583
PspFI CCCAGC 1 cut(s) 393
PspGI CCWGG 7 cut(s) 14, 53, 274, 957, 990, 1380, 1671
PspN4I GGNNCC 9 cut(s) 83, 121, 195, 259, 452, 545, 718, 869, 1717
PspPI GGNCC 6 cut(s) 120, 258, 544, 1014, 1208, 1317
PspPPI RGGWCCY 2 cut(s) 120, 544
PstI CTGCAG 1 cut(s) 1606
PstNI CAGNNNCTG 3 cut(s) 463, 1279, 1610
PsuI RGATCY 2 cut(s) 182, 1330
PvuII CAGCTG 4 cut(s) 496, 709, 937, 1276
RsaI GTAC 8 cut(s) 41, 83, 242, 580, 718, 1149, 1436, 1735
RsaNI GTAC 8 cut(s) 40, 82, 241, 579, 717, 1148, 1435, 1734
RseI CAYNNNNRTG 4 cut(s) 290, 950, 1118, 1136
SacI GAGCTC 1 cut(s) 818
SalI GTCGAC 1 cut(s) 986
SaqAI TTAA 2 cut(s) 1428, 1617
Sau3AI GATC 9 cut(s) 32, 182, 300, 711, 736, 1066, 1330, 1534, 1744
Sau96I GGNCC 6 cut(s) 120, 258, 544, 1014, 1208, 1317
SchI GAGTC 4 cut(s) 164, 1018, 1580, 1616
SduI GDGCHC 2 cut(s) 818, 1423
SfaNI GCATC 3 cut(s) 462, 958, 1404
SfcI CTRYAG 2 cut(s) 455, 1602
SinI GGWCC 5 cut(s) 120, 258, 544, 1014, 1317
SmaI CCCGGG 5 cut(s) 390, 782, 1207, 1403, 1583
SmiMI CAYNNNNRTG 4 cut(s) 290, 950, 1118, 1136
SmlI CTYRAG 1 cut(s) 1538
SmoI CTYRAG 1 cut(s) 1538
SpeI ACTAGT 1 cut(s) 613
Sse9I AATT 3 cut(s) 101, 1116, 1655
SspMI CTAG 6 cut(s) 86, 597, 614, 668, 854, 1643
SstI GAGCTC 1 cut(s) 818
StyI CCWWGG 3 cut(s) 85, 424, 1104
TaaI ACNGT 5 cut(s) 208, 262, 459, 583, 1058
TaiI ACGT 1 cut(s) 987
TaqII GACCGA 1 cut(s) 1002
TasI AATT 3 cut(s) 101, 1116, 1655
TauI GCSGC 6 cut(s) 316, 377, 596, 1514, 1634, 1703
TfiI GAWTC 6 cut(s) 5, 379, 412, 825, 1387, 1406
Tru1I TTAA 2 cut(s) 1428, 1617
Tru9I TTAA 2 cut(s) 1428, 1617
TscAI CASTG 2 cut(s) 213, 1456
TseFI GTSAC 4 cut(s) 202, 483, 583, 1212
TseI GCWGC 9 cut(s) 403, 466, 493, 706, 1096, 1273, 1276, 1522, 1601
Tsp45I GTSAC 4 cut(s) 202, 483, 583, 1212
TspDTI ATGAA 4 cut(s) 285, 308, 817, 1317
TspMI CCCGGG 5 cut(s) 388, 780, 1205, 1401, 1581
TspRI CASTG 2 cut(s) 213, 1456
VpaK11BI GGWCC 5 cut(s) 120, 258, 544, 1014, 1317
XagI CCTNNNNNAGG 2 cut(s) 52, 1472
XapI RAATTY 1 cut(s) 1655
XbaI TCTAGA 1 cut(s) 1642
XceI RCATGY 2 cut(s) 313, 949
XmaI CCCGGG 5 cut(s) 388, 780, 1205, 1401, 1581
XmaJI CCTAGG 1 cut(s) 85
XmiI GTMKAC 3 cut(s) 96, 786, 987
XspI CTAG 6 cut(s) 86, 597, 614, 668, 854, 1643
ZraI GACGTC 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.