Rmu_sc0007230.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007230.1
OG0000087
Physical Location & Seq
Forward (+)
8913 .. 10576
1664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007230.1_g000003.1.cds

Sequence Viewer

Length: 1401 bp
atgtttgccgctcgggactacgagcctttggttaccgatatgcccacttctcaaagcaagaagtggaggagtaaagtgtttcttgctggagggcgatggcagattaaaaataagaagtggcacttgacgggcacgtttcaagctatcggggaccagtcgcactcactgtctgacgttgagagaaaacgcatagccagggtgtatgccatatggagtgaagaggagagaagcttctataggttcatctggtactccatactagataggctaggcctagggagactccctgtgaaagcgcagaagaggaaacctcggaaaggtaaggaggacaacaagatggatgacaatcaattgatggacatgctcatgagccaaggagaagaggcccttaatattgacgttgacctggcgtcgaaggctacgggtcgctcctttgaagaagttttgctagagatcggtgacgaagggtacgggaaccctgatcctgcagctcccgttatccaggttaagcagcctgttactagtgacgtggtcactgttgctgataccggaagaggtaaggcgtgggtatttggatctatttcttcccggtctgtcgggtcagctggaagcgaggacatcttgcttcccggtgagaagagaaggttccacaggcattgccatcggagaggggataaggaaaaggttacttacaccggtcaggatggtataggggcgagagccaagaggcaaaagaagagccacccgggatgggaaccgttgccctcgcttgcgctcttgtccccggccatcccagtagtccccaagaagcccatcaagaaactgctgagcgagtacggggttgtagatgagaagtttgtgcgctcgatactcgcagatctgaaagatatcgacctcgaccgggtacgggcgaaggacaacactccccaggaaaatagtcgtatcgcccgggaatccatgatgcgggcactattcaatgtgtactcgatcgacgccagtgaggaagatactctcttgaaggaagaggttagcaatctctccgggcaagtgaactatcttcaaggggagaaagcaaagctggagaaagagcgagacttcttgaagaggaaggtggagtccttgactccccaggtagtcgagctggaggtggccgagaagaagatcgtggagcttgagggtgaacttgctggagcaagggatgagctagggagtgcccggggctccgagaaagaagctaaaaatgataaggccgtgatcacgaagtataaagagtgggtggcagccgggtacctggatgaagcgaaattcaggcgggcacttcttgagaagaagaagaaggaacaggaggctgcagccaaggcgggtgctggtggatcccagagtaccgttcaggaacagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

466

Amino Acids

52.36

Weight (kDa)

9.15

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1287
AccB1I GGYRCC 1 cut(s) 1287
AccBSI CCGCTC 1 cut(s) 11
AciI CCGC 4 cut(s) 9, 964, 1312, 1361
AclWI GGATC 4 cut(s) 476, 583, 1368, 1381
AcoI YGGCCR 2 cut(s) 786, 1149
AcsI RAATTY 1 cut(s) 1304
AcyI GRCGYC 2 cut(s) 410, 993
AfaI GTAC 7 cut(s) 251, 470, 836, 906, 983, 1289, 1384
AfiI CCNNNNNNNGG 5 cut(s) 317, 751, 901, 907, 963
AgeI ACCGGT 1 cut(s) 695
AgsI TTSAA 6 cut(s) 140, 437, 976, 1018, 1061, 1102
AhdI GACNNNNNGTC 1 cut(s) 409
AhlI ACTAGT 1 cut(s) 521
AjiI CACGTC 1 cut(s) 529
AjnI CCWGG 6 cut(s) 194, 405, 501, 927, 1128, 1290
AluBI AGCT 9 cut(s) 143, 231, 491, 605, 1078, 1141, 1171, 1204, 1235
AluI AGCT 9 cut(s) 143, 231, 491, 605, 1078, 1141, 1171, 1204, 1235
Alw26I GTCTC 2 cut(s) 274, 1086
AlwI GGATC 4 cut(s) 476, 583, 1368, 1381
Ama87I CYCGRG 4 cut(s) 12, 745, 948, 1215
AoxI GGCC 5 cut(s) 271, 384, 786, 1149, 1248
ApeKI GCWGC 5 cut(s) 488, 511, 1280, 1349, 1352
ApoI RAATTY 1 cut(s) 1304
AsiGI ACCGGT 1 cut(s) 695
Asp718I GGTACC 1 cut(s) 1287
AspA2I CCTAGG 1 cut(s) 274
AspLEI GCGC 3 cut(s) 298, 775, 864
AspS9I GGNCC 2 cut(s) 151, 385
AsuHPI GGTGA 3 cut(s) 470, 644, 1190
AvaI CYCGRG 4 cut(s) 12, 745, 948, 1215
AvaII GGWCC 1 cut(s) 151
AvrII CCTAGG 1 cut(s) 274
BaeGI GKGCMC 4 cut(s) 134, 970, 1216, 1318
BamHI GGATCC 1 cut(s) 1373
BanI GGYRCC 1 cut(s) 1287
BanII GRGCYC 1 cut(s) 1223
BbvI GCAGC 5 cut(s) 500, 523, 1292, 1336, 1364
BccI CCATC 8 cut(s) 90, 331, 349, 669, 698, 744, 797, 821
BceAI ACGGC 1 cut(s) 1235
BcgI CGANNNNNNTGC 2 cut(s) 644, 678
BciT130I CCWGG 6 cut(s) 196, 407, 503, 929, 1130, 1292
BclI TGATCA 1 cut(s) 1254
BcoDI GTCTC 2 cut(s) 274, 1086
BcuI ACTAGT 1 cut(s) 521
BfaI CTAG 6 cut(s) 260, 269, 275, 449, 522, 1205
BfmI CTRYAG 3 cut(s) 235, 486, 1350
BglII AGATCT 1 cut(s) 877
BisI GCNGC 6 cut(s) 9, 489, 512, 1281, 1350, 1353
BlnI CCTAGG 1 cut(s) 274
BlpI GCTNAGC 1 cut(s) 827
BlsI GCNGC 6 cut(s) 10, 490, 513, 1282, 1351, 1354
Bme18I GGWCC 1 cut(s) 151
BmeRI GACNNNNNGTC 1 cut(s) 409
BmeT110I CYCGRG 4 cut(s) 12, 745, 948, 1215
BmgBI CACGTC 1 cut(s) 529
BmgT120I GGNCC 2 cut(s) 151, 385
BmiI GGNNCC 7 cut(s) 152, 476, 647, 756, 1222, 1289, 1375
BmrI ACTGGG 1 cut(s) 788
BmsI GCATC 1 cut(s) 951
BmuI ACTGGG 1 cut(s) 788
BplI GAGNNNNNCTC 2 cut(s) 295, 327
BpmI CTGGAG 4 cut(s) 108, 1100, 1163, 1209
Bpu1102I GCTNAGC 1 cut(s) 827
BpuEI CTTGAG 2 cut(s) 1193, 1343
BsaBI GATNNNNATC 1 cut(s) 345
BsaHI GRCGYC 2 cut(s) 410, 993
BsaWI WCCGGW 2 cut(s) 548, 695
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 751, 901, 907, 963
Bse118I RCCGGY 1 cut(s) 695
Bse1I ACTGG 3 cut(s) 154, 794, 996
Bse3DI GCAATG 1 cut(s) 655
Bse8I GATNNNNATC 1 cut(s) 345
BseBI CCWGG 6 cut(s) 196, 407, 503, 929, 1130, 1292
BseGI GGATG 6 cut(s) 346, 709, 755, 789, 1204, 1300
BseJI GATNNNNATC 1 cut(s) 345
BseLI CCNNNNNNNGG 5 cut(s) 317, 751, 901, 907, 963
BseMI GCAATG 1 cut(s) 655
BseMII CTCAG 1 cut(s) 818
BseNI ACTGG 3 cut(s) 154, 794, 996
BseRI GAGGAG 2 cut(s) 82, 236
BseSI GKGCMC 4 cut(s) 134, 970, 1216, 1318
BseXI GCAGC 5 cut(s) 500, 523, 1292, 1336, 1364
Bsh1285I CGRYCG 2 cut(s) 901, 990
BshFI GGCC 5 cut(s) 273, 386, 788, 1151, 1250
BshNI GGYRCC 1 cut(s) 1287
BshTI ACCGGT 1 cut(s) 695
BsiEI CGRYCG 2 cut(s) 901, 990
BsiHKCI CYCGRG 4 cut(s) 12, 745, 948, 1215
BslFI GGGAC 4 cut(s) 29, 164, 766, 785
BslI CCNNNNNNNGG 5 cut(s) 317, 751, 901, 907, 963
BsmAI GTCTC 2 cut(s) 274, 1086
BsmFI GGGAC 4 cut(s) 29, 164, 766, 785
BsnI GGCC 5 cut(s) 273, 386, 788, 1151, 1250
BsoBI CYCGRG 4 cut(s) 12, 745, 948, 1215
Bsp1286I GDGCHC 5 cut(s) 134, 970, 1216, 1223, 1318
Bsp143I GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
Bsp1720I GCTNAGC 1 cut(s) 827
BspACI CCGC 4 cut(s) 9, 964, 1312, 1361
BspANI GGCC 5 cut(s) 273, 386, 788, 1151, 1250
BspCNI CTCAG 1 cut(s) 819
BspHI TCATGA 1 cut(s) 366
BspLI GGNNCC 7 cut(s) 152, 476, 647, 756, 1222, 1289, 1375
BspMAI CTGCAG 2 cut(s) 490, 1354
BspPI GGATC 4 cut(s) 476, 583, 1368, 1381
BspQI GCTCTTC 1 cut(s) 731
BspT107I GGYRCC 1 cut(s) 1287
BsrBI CCGCTC 1 cut(s) 11
BsrDI GCAATG 1 cut(s) 655
BsrFI RCCGGY 1 cut(s) 695
BsrI ACTGG 3 cut(s) 154, 794, 996
BssAI RCCGGY 1 cut(s) 695
BssMI GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
BssNI GRCGYC 2 cut(s) 410, 993
BssT1I CCWWGG 3 cut(s) 274, 373, 1356
Bst2UI CCWGG 6 cut(s) 196, 407, 503, 929, 1130, 1292
Bst4CI ACNGT 5 cut(s) 168, 538, 759, 1387, 1398
Bst6I CTCTTC 8 cut(s) 213, 296, 375, 547, 632, 731, 1017, 1097
BstACI GRCGYC 2 cut(s) 410, 993
BstC8I GCNNGC 3 cut(s) 771, 966, 1314
BstDEI CTNAG 1 cut(s) 827
BstEII GGTNACC 1 cut(s) 31
BstENI CCTNNNNNAGG 1 cut(s) 315
BstF5I GGATG 6 cut(s) 346, 709, 755, 789, 1204, 1300
BstHHI GCGC 3 cut(s) 298, 775, 864
BstKTI GATC 8 cut(s) 456, 484, 578, 880, 990, 1164, 1257, 1376
BstMAI GTCTC 2 cut(s) 274, 1086
BstMBI GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
BstMCI CGRYCG 2 cut(s) 901, 990
BstMWI GCNNNNNNNGC 2 cut(s) 416, 1358
BstNI CCWGG 6 cut(s) 196, 407, 503, 929, 1130, 1292
BstNSI RCATGY 1 cut(s) 364
BstPI GGTNACC 1 cut(s) 31
BstSFI CTRYAG 3 cut(s) 235, 486, 1350
BstSLI GKGCMC 4 cut(s) 134, 970, 1216, 1318
BstV1I GCAGC 5 cut(s) 500, 523, 1292, 1336, 1364
BstX2I RGATCY 3 cut(s) 575, 877, 1373
BstYI RGATCY 3 cut(s) 575, 877, 1373
BsuRI GGCC 5 cut(s) 273, 386, 788, 1151, 1250
BtgZI GCGATG 1 cut(s) 109
BtrI CACGTC 1 cut(s) 529
BtsCI GGATG 6 cut(s) 346, 709, 755, 789, 1204, 1300
BtsIMutI CAGTG 3 cut(s) 164, 534, 1003
Cac8I GCNNGC 3 cut(s) 771, 966, 1314
CciI TCATGA 1 cut(s) 366
CfoI GCGC 3 cut(s) 298, 775, 864
Cfr10I RCCGGY 1 cut(s) 695
Cfr13I GGNCC 2 cut(s) 151, 385
Cfr9I CCCGGG 3 cut(s) 745, 948, 1215
CseI GACGC 2 cut(s) 399, 1001
Csp6I GTAC 7 cut(s) 250, 469, 835, 905, 982, 1288, 1383
CspAI ACCGGT 1 cut(s) 695
CspCI CAANNNNNGTGG 2 cut(s) 638, 673
CviAII CATG 3 cut(s) 361, 367, 958
CviQI GTAC 7 cut(s) 250, 469, 835, 905, 982, 1288, 1383
DdeI CTNAG 1 cut(s) 827
DpnI GATC 8 cut(s) 455, 483, 577, 879, 989, 1163, 1256, 1375
DpnII GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
DriI GACNNNNNGTC 1 cut(s) 409
EaeI YGGCCR 2 cut(s) 786, 1149
Eam1104I CTCTTC 8 cut(s) 213, 296, 375, 547, 632, 731, 1017, 1097
Eam1105I GACNNNNNGTC 1 cut(s) 409
EarI CTCTTC 8 cut(s) 213, 296, 375, 547, 632, 731, 1017, 1097
Eco130I CCWWGG 3 cut(s) 274, 373, 1356
Eco147I AGGCCT 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 1223
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 1 cut(s) 151
Eco88I CYCGRG 4 cut(s) 12, 745, 948, 1215
Eco91I GGTNACC 1 cut(s) 31
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoO109I RGGNCCY 1 cut(s) 385
EcoO65I GGTNACC 1 cut(s) 31
EcoRII CCWGG 6 cut(s) 194, 405, 501, 927, 1128, 1290
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 3 cut(s) 274, 373, 1356
EcoT38I GRGCYC 1 cut(s) 1223
ErhI CCWWGG 3 cut(s) 274, 373, 1356
FaeI CATG 3 cut(s) 364, 370, 961
FalI AAGNNNNNCTT 6 cut(s) 66, 98, 107, 139, 372, 404
FaqI GGGAC 4 cut(s) 29, 164, 766, 785
FatI CATG 3 cut(s) 360, 366, 957
FauI CCCGC 3 cut(s) 957, 1305, 1354
FauNDI CATATG 1 cut(s) 209
FbaI TGATCA 1 cut(s) 1254
Fnu4HI GCNGC 6 cut(s) 9, 489, 512, 1281, 1350, 1353
FokI GGATG 6 cut(s) 353, 716, 762, 776, 1211, 1307
FriOI GRGCYC 1 cut(s) 1223
Fsp4HI GCNGC 6 cut(s) 9, 489, 512, 1281, 1350, 1353
FspBI CTAG 6 cut(s) 260, 269, 275, 449, 522, 1205
GlaI GCGC 3 cut(s) 297, 774, 863
GluI GCNGC 6 cut(s) 9, 489, 512, 1281, 1350, 1353
GsuI CTGGAG 4 cut(s) 108, 1100, 1163, 1209
HaeIII GGCC 5 cut(s) 273, 386, 788, 1151, 1250
HgaI GACGC 2 cut(s) 399, 1001
HhaI GCGC 3 cut(s) 298, 775, 864
Hin1I GRCGYC 2 cut(s) 410, 993
Hin1II CATG 3 cut(s) 364, 370, 961
Hin6I GCGC 3 cut(s) 296, 773, 862
HinP1I GCGC 3 cut(s) 296, 773, 862
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 229
HinfI GANTC 4 cut(s) 282, 953, 1115, 1123
HphI GGTGA 3 cut(s) 470, 644, 1190
Hpy166II GTNNAC 4 cut(s) 403, 982, 1051, 1181
Hpy188I TCNGA 5 cut(s) 172, 315, 666, 882, 1225
Hpy188III TCNNGA 9 cut(s) 14, 367, 701, 817, 1015, 1099, 1258, 1322, 1391
Hpy8I GTNNAC 4 cut(s) 403, 982, 1051, 1181
Hpy99I CGWCG 2 cut(s) 415, 995
HpyAV CCTTC 7 cut(s) 409, 458, 636, 907, 1012, 1102, 1330
HpyCH4III ACNGT 5 cut(s) 168, 538, 759, 1387, 1398
HpyCH4IV ACGT 4 cut(s) 134, 174, 399, 528
HpyCH4V TGCA 2 cut(s) 488, 1352
HpyF10VI GCNNNNNNNGC 2 cut(s) 416, 1358
HpyF3I CTNAG 1 cut(s) 827
HpySE526I ACGT 4 cut(s) 134, 174, 399, 528
Hsp92I GRCGYC 2 cut(s) 410, 993
Hsp92II CATG 3 cut(s) 364, 370, 961
HspAI GCGC 3 cut(s) 296, 773, 862
KpnI GGTACC 1 cut(s) 1291
Ksp22I TGATCA 1 cut(s) 1254
Kzo9I GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
LguI GCTCTTC 1 cut(s) 731
LmnI GCTCC 5 cut(s) 434, 496, 1168, 1190, 1226
Lsp1109I GCAGC 5 cut(s) 500, 523, 1292, 1336, 1364
LweI GCATC 1 cut(s) 951
MaeI CTAG 6 cut(s) 260, 269, 275, 449, 522, 1205
MaeII ACGT 4 cut(s) 134, 174, 399, 528
MaeIII GTNAC 6 cut(s) 31, 458, 517, 524, 532, 685
MalI GATC 8 cut(s) 455, 483, 577, 879, 989, 1163, 1256, 1375
MbiI CCGCTC 1 cut(s) 11
MboI GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
MfeI CAATTG 1 cut(s) 350
MflI RGATCY 3 cut(s) 575, 877, 1373
MhlI GDGCHC 5 cut(s) 134, 970, 1216, 1223, 1318
MluCI AATT 2 cut(s) 350, 1304
MlyI GAGTC 3 cut(s) 276, 1117, 1124
MseI TTAA 3 cut(s) 105, 390, 507
MslI CAYNNNNRTG 1 cut(s) 365
MspA1I CMGCKG 1 cut(s) 605
MunI CAATTG 1 cut(s) 350
MvaI CCWGG 6 cut(s) 196, 407, 503, 929, 1130, 1292
MwoI GCNNNNNNNGC 2 cut(s) 416, 1358
NdeI CATATG 1 cut(s) 209
NdeII GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
NlaIII CATG 3 cut(s) 364, 370, 961
NlaIV GGNNCC 7 cut(s) 152, 476, 647, 756, 1222, 1289, 1375
NmeAIII GCCGAG 1 cut(s) 1177
NmuCI GTSAC 3 cut(s) 458, 524, 532
NspI RCATGY 1 cut(s) 364
PagI TCATGA 1 cut(s) 366
PceI AGGCCT 1 cut(s) 273
PciSI GCTCTTC 1 cut(s) 731
PfeI GAWTC 1 cut(s) 953
PflFI GACNNNGTC 1 cut(s) 530
PinAI ACCGGT 1 cut(s) 695
PkrI GCNGC 6 cut(s) 10, 490, 513, 1282, 1351, 1354
Ple19I CGATCG 1 cut(s) 990
PleI GAGTC 3 cut(s) 276, 1117, 1123
PpsI GAGTC 3 cut(s) 276, 1117, 1123
Psp6I CCWGG 6 cut(s) 194, 405, 501, 927, 1128, 1290
PspEI GGTNACC 1 cut(s) 31
PspGI CCWGG 6 cut(s) 194, 405, 501, 927, 1128, 1290
PspN4I GGNNCC 7 cut(s) 152, 476, 647, 756, 1222, 1289, 1375
PspPI GGNCC 2 cut(s) 151, 385
PstI CTGCAG 2 cut(s) 490, 1354
PsuI RGATCY 3 cut(s) 575, 877, 1373
PsyI GACNNNGTC 1 cut(s) 530
PvuI CGATCG 1 cut(s) 990
PvuII CAGCTG 1 cut(s) 605
RsaI GTAC 7 cut(s) 251, 470, 836, 906, 983, 1289, 1384
RsaNI GTAC 7 cut(s) 250, 469, 835, 905, 982, 1288, 1383
RseI CAYNNNNRTG 1 cut(s) 365
SapI GCTCTTC 1 cut(s) 731
SaqAI TTAA 3 cut(s) 105, 390, 507
SatI GCNGC 6 cut(s) 9, 489, 512, 1281, 1350, 1353
Sau3AI GATC 8 cut(s) 453, 481, 575, 877, 987, 1161, 1254, 1373
Sau96I GGNCC 2 cut(s) 151, 385
SchI GAGTC 3 cut(s) 276, 1117, 1124
SduI GDGCHC 5 cut(s) 134, 970, 1216, 1223, 1318
SfaNI GCATC 1 cut(s) 951
SfcI CTRYAG 3 cut(s) 235, 486, 1350
SinI GGWCC 1 cut(s) 151
SmaI CCCGGG 3 cut(s) 747, 950, 1217
SmiMI CAYNNNNRTG 1 cut(s) 365
SmlI CTYRAG 2 cut(s) 1172, 1322
SmoI CTYRAG 2 cut(s) 1172, 1322
SpeI ACTAGT 1 cut(s) 521
Sse9I AATT 2 cut(s) 350, 1304
SseBI AGGCCT 1 cut(s) 273
SsiI CCGC 4 cut(s) 9, 964, 1312, 1361
SspI AATATT 1 cut(s) 394
SspMI CTAG 6 cut(s) 260, 269, 275, 449, 522, 1205
StuI AGGCCT 1 cut(s) 273
StyI CCWWGG 3 cut(s) 274, 373, 1356
TaaI ACNGT 5 cut(s) 168, 538, 759, 1387, 1398
TaiI ACGT 4 cut(s) 137, 177, 402, 531
TaqI TCGA 7 cut(s) 413, 866, 891, 897, 986, 990, 1137
TasI AATT 2 cut(s) 350, 1304
TatI WGTACW 1 cut(s) 981
TauI GCSGC 1 cut(s) 11
TfiI GAWTC 1 cut(s) 953
Tru1I TTAA 3 cut(s) 105, 390, 507
Tru9I TTAA 3 cut(s) 105, 390, 507
TscAI CASTG 3 cut(s) 171, 541, 1003
TseFI GTSAC 3 cut(s) 458, 524, 532
TseI GCWGC 5 cut(s) 488, 511, 1280, 1349, 1352
Tsp45I GTSAC 3 cut(s) 458, 524, 532
TspDTI ATGAA 2 cut(s) 232, 1311
TspMI CCCGGG 3 cut(s) 745, 948, 1215
TspRI CASTG 3 cut(s) 171, 541, 1003
Tth111I GACNNNGTC 1 cut(s) 530
VpaK11BI GGWCC 1 cut(s) 151
XagI CCTNNNNNAGG 1 cut(s) 315
XapI RAATTY 1 cut(s) 1304
XceI RCATGY 1 cut(s) 364
XmaI CCCGGG 3 cut(s) 745, 948, 1215
XmaJI CCTAGG 1 cut(s) 274
XspI CTAG 6 cut(s) 260, 269, 275, 449, 522, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.