Rmu_sc0009483.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009483.1
OG0000087
Physical Location & Seq
Reverse (-)
463 .. 2645
2183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009483.1_g000001.1.cds

Sequence Viewer

Length: 1476 bp
atggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcaactggggtgttctcggagagtagtggggagtcagacgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccgaggtacacacttgcggacgggactgtatgcgacgaacctgggagaagcatgacgatgaaggagctcgtagacatgcggctgaagtgggggataccggacgcagtagagattaggcctcttagagatggagagatggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggggaagcagtcttgtgcgggtacggtgacctttgccgctagggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggcggcagataaaaaataagaagtggcagctgaccggtactttccaagctatccgggaccagtcctatatgctatccaaagtagaaaagaagaggatagcccgggaggaggacaggatggatgatgctcaactaatggacatgctgatgagccagggagaagatgccctgcacatcaacgtcgacctagggtcgaaaggcacgaatcggtctatcgaagagacccttttggagataaccgatgagggatacggtgaacctgatcccgacgctccagtgacccacgccgtgcagccctctatggccgatgtcattacgatagctgaccccggggtgggacaagtaccggccccagtgcctatttcgtctcgttccactgggagcgatgaggtgttactccccggggagaagaagagatcccacaagcaccggcatcgaaccgataaggaggtgacgtacactggccgggatgtccagggtacgggtgcgaagaggcagaagaaagatcacccgggatcagggccgttgccttcccttggcctgttatctcccgccgttccggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcgttgagagctgagatggtcgcctctaagcagcggattgcggagcttgagggtgaggttgctgaggcgcgggaggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatctctatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtagcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagtgggaggcggcggccaagtcaggtaccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

491

Amino Acids

54.05

Weight (kDa)

5.6

Isoelectric Point (pI)

46.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 15, 1436
AccB1I GGYRCC 3 cut(s) 15, 384, 1436
AccBSI CCGCTC 1 cut(s) 1147
AccI GTMKAC 3 cut(s) 30, 240, 726
AccII CGCG 2 cut(s) 1222, 1244
AclWI GGATC 5 cut(s) 124, 800, 954, 1066, 1239
AcoI YGGCCR 6 cut(s) 144, 306, 846, 1006, 1353, 1425
AcsI RAATTY 1 cut(s) 1376
AcuI CTGAAG 1 cut(s) 272
AdeI CACNNNGTG 1 cut(s) 832
AgeI ACCGGT 3 cut(s) 12, 578, 1439
AhdI GACNNNNNGTC 1 cut(s) 733
AjnI CCWGG 4 cut(s) 208, 696, 1017, 1392
AloI GAACNNNNNNTCC 2 cut(s) 38, 70
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 4 cut(s) 758, 915, 1394, 1452
AlwI GGATC 5 cut(s) 124, 800, 954, 1066, 1239
AlwNI CAGNNNCTG 1 cut(s) 397
Ama87I CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
ApeKI GCWGC 7 cut(s) 337, 400, 571, 835, 1183, 1304, 1307
ApoI RAATTY 1 cut(s) 1376
AsiGI ACCGGT 3 cut(s) 12, 578, 1439
Asp718I GGTACC 2 cut(s) 15, 1436
AspA2I CCTAGG 2 cut(s) 19, 730
AspLEI GCGC 2 cut(s) 337, 1222
AspS9I GGNCC 5 cut(s) 54, 127, 601, 892, 1064
AsuHPI GGTGA 8 cut(s) 113, 411, 460, 809, 1006, 1043, 1117, 1217
AvaI CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
AvaII GGWCC 2 cut(s) 54, 601
AvrII CCTAGG 2 cut(s) 19, 730
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 3 cut(s) 15, 384, 1436
BanII GRGCYC 1 cut(s) 237
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 2 cut(s) 341, 1253
Bbv12I GWGCWC 1 cut(s) 237
BbvCI CCTCAGC 1 cut(s) 1215
BbvI GCAGC 7 cut(s) 324, 387, 583, 847, 1195, 1291, 1294
BccI CCATC 5 cut(s) 290, 298, 655, 1162, 1454
BceAI ACGGC 4 cut(s) 815, 1051, 1082, 1244
BcgI CGANNNNNNTGC 2 cut(s) 959, 993
BciT130I CCWGG 4 cut(s) 210, 698, 1019, 1394
BciVI GTATCC 2 cut(s) 255, 785
BcoDI GTCTC 4 cut(s) 758, 915, 1394, 1452
BfaI CTAG 5 cut(s) 20, 462, 479, 533, 731
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 338
BfuI GTATCC 2 cut(s) 255, 785
BlnI CCTAGG 2 cut(s) 19, 730
Bme18I GGWCC 2 cut(s) 54, 601
BmeRI GACNNNNNGTC 1 cut(s) 733
BmeT110I CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
BmgT120I GGNCC 5 cut(s) 54, 127, 601, 892, 1064
BmiI GGNNCC 7 cut(s) 17, 55, 129, 386, 602, 894, 1438
BmrI ACTGGG 3 cut(s) 72, 890, 930
BmsI GCATC 4 cut(s) 396, 658, 697, 985
BmuI ACTGGG 3 cut(s) 72, 890, 930
BplI GAGNNNNNCTC 4 cut(s) 1136, 1168, 1277, 1309
BpmI CTGGAG 3 cut(s) 801, 1157, 1415
Bpu10I CCTNAGC 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 1220
BsaBI GATNNNNATC 1 cut(s) 1464
BsaI GGTCTC 3 cut(s) 758, 1394, 1452
BsaWI WCCGGW 5 cut(s) 12, 265, 578, 1102, 1439
BsaXI ACNNNNNCTCC 4 cut(s) 983, 1013, 1259, 1289
Bse118I RCCGGY 5 cut(s) 12, 578, 889, 972, 1439
Bse1I ACTGG 6 cut(s) 67, 604, 818, 896, 925, 1009
Bse8I GATNNNNATC 1 cut(s) 1464
BseBI CCWGG 4 cut(s) 210, 698, 1019, 1394
BseGI GGATG 4 cut(s) 411, 666, 670, 1018
BseJI GATNNNNATC 1 cut(s) 1464
BseMII CTCAG 4 cut(s) 1155, 1206, 1293, 1463
BseNI ACTGG 6 cut(s) 67, 604, 818, 896, 925, 1009
BseRI GAGGAG 3 cut(s) 665, 1241, 1280
BseX3I CGGCCG 1 cut(s) 1353
BseXI GCAGC 7 cut(s) 324, 387, 583, 847, 1195, 1291, 1294
BsgI GTGCAG 3 cut(s) 323, 698, 854
Bsh1236I CGCG 2 cut(s) 1222, 1244
Bsh1285I CGRYCG 2 cut(s) 13, 1356
BshNI GGYRCC 3 cut(s) 15, 384, 1436
BshTI ACCGGT 3 cut(s) 12, 578, 1439
BsiEI CGRYCG 2 cut(s) 13, 1356
BsiHKAI GWGCWC 1 cut(s) 237
BsiHKCI CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
BslFI GGGAC 4 cut(s) 205, 614, 894, 1163
BsmAI GTCTC 4 cut(s) 758, 915, 1394, 1452
BsmBI CGTCTC 1 cut(s) 915
BsmFI GGGAC 4 cut(s) 205, 614, 894, 1163
BsmI GAATGC 1 cut(s) 159
Bso31I GGTCTC 3 cut(s) 758, 1394, 1452
BsoBI CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
Bsp1286I GDGCHC 1 cut(s) 237
Bsp143I GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
BspCNI CTCAG 4 cut(s) 1156, 1207, 1292, 1462
BspFNI CGCG 2 cut(s) 1222, 1244
BspHI TCATGA 1 cut(s) 1329
BspLI GGNNCC 7 cut(s) 17, 55, 129, 386, 602, 894, 1438
BspPI GGATC 5 cut(s) 124, 800, 954, 1066, 1239
BspT107I GGYRCC 3 cut(s) 15, 384, 1436
BspTNI GGTCTC 3 cut(s) 758, 1394, 1452
BsrBI CCGCTC 1 cut(s) 1147
BsrFI RCCGGY 5 cut(s) 12, 578, 889, 972, 1439
BsrI ACTGG 6 cut(s) 67, 604, 818, 896, 925, 1009
BssAI RCCGGY 5 cut(s) 12, 578, 889, 972, 1439
BssMI GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
BssSI CACGAG 2 cut(s) 341, 1253
BssT1I CCWWGG 4 cut(s) 19, 358, 730, 1078
Bst2BI CACGAG 2 cut(s) 341, 1253
Bst2UI CCWGG 4 cut(s) 210, 698, 1019, 1394
Bst4CI ACNGT 5 cut(s) 142, 196, 393, 448, 797
Bst6I CTCTTC 4 cut(s) 629, 756, 950, 1028
BstAPI GCANNNNNTGC 1 cut(s) 317
BstC8I GCNNGC 1 cut(s) 1302
BstDEI CTNAG 7 cut(s) 290, 1164, 1179, 1215, 1279, 1363, 1449
BstDSI CCRYGG 2 cut(s) 1242, 1260
BstEII GGTNACC 1 cut(s) 448
BstF5I GGATG 4 cut(s) 411, 666, 670, 1018
BstFNI CGCG 2 cut(s) 1222, 1244
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 2 cut(s) 337, 1222
BstKTI GATC 7 cut(s) 119, 808, 962, 1051, 1061, 1234, 1468
BstMAI GTCTC 4 cut(s) 758, 915, 1394, 1452
BstMBI GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
BstMCI CGRYCG 2 cut(s) 13, 1356
BstMWI GCNNNNNNNGC 3 cut(s) 317, 376, 406
BstNI CCWGG 4 cut(s) 210, 698, 1019, 1394
BstNSI RCATGY 2 cut(s) 247, 688
BstPI GGTNACC 1 cut(s) 448
BstSFI CTRYAG 1 cut(s) 389
BstUI CGCG 2 cut(s) 1222, 1244
BstV1I GCAGC 7 cut(s) 324, 387, 583, 847, 1195, 1291, 1294
BstX2I RGATCY 2 cut(s) 116, 959
BstYI RGATCY 2 cut(s) 116, 959
BstZI CGGCCG 1 cut(s) 1353
BsuI GTATCC 2 cut(s) 255, 785
BtgI CCRYGG 2 cut(s) 1242, 1260
BtgZI GCGATG 1 cut(s) 942
BtsCI GGATG 4 cut(s) 411, 666, 670, 1018
BtsIMutI CAGTG 5 cut(s) 147, 825, 903, 918, 1002
Cac8I GCNNGC 1 cut(s) 1302
CaiI CAGNNNCTG 1 cut(s) 397
CciI TCATGA 1 cut(s) 1329
CfoI GCGC 2 cut(s) 337, 1222
Cfr10I RCCGGY 5 cut(s) 12, 578, 889, 972, 1439
Cfr13I GGNCC 5 cut(s) 54, 127, 601, 892, 1064
Cfr42I CCGCGG 1 cut(s) 1245
Cfr9I CCCGGG 5 cut(s) 322, 645, 872, 944, 1054
CseI GACGC 2 cut(s) 278, 821
CspAI ACCGGT 3 cut(s) 12, 578, 1439
CviAII CATG 5 cut(s) 220, 244, 685, 1118, 1330
DdeI CTNAG 7 cut(s) 290, 1164, 1179, 1215, 1279, 1363, 1449
DpnI GATC 7 cut(s) 118, 807, 961, 1050, 1060, 1233, 1467
DpnII GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
DraIII CACNNNGTG 1 cut(s) 832
DriI GACNNNNNGTC 1 cut(s) 733
EaeI YGGCCR 6 cut(s) 144, 306, 846, 1006, 1353, 1425
EagI CGGCCG 1 cut(s) 1353
Eam1104I CTCTTC 4 cut(s) 629, 756, 950, 1028
Eam1105I GACNNNNNGTC 1 cut(s) 733
EarI CTCTTC 4 cut(s) 629, 756, 950, 1028
Ecl136II GAGCTC 1 cut(s) 235
EclXI CGGCCG 1 cut(s) 1353
Eco130I CCWWGG 4 cut(s) 19, 358, 730, 1078
Eco147I AGGCCT 1 cut(s) 286
Eco24I GRGCYC 1 cut(s) 237
Eco31I GGTCTC 3 cut(s) 758, 1394, 1452
Eco47I GGWCC 2 cut(s) 54, 601
Eco52I CGGCCG 1 cut(s) 1353
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 272
Eco88I CYCGRG 6 cut(s) 152, 322, 645, 872, 944, 1054
Eco91I GGTNACC 1 cut(s) 448
EcoICRI GAGCTC 1 cut(s) 235
EcoO109I RGGNCCY 2 cut(s) 54, 127
EcoO65I GGTNACC 1 cut(s) 448
EcoRII CCWGG 4 cut(s) 208, 696, 1017, 1392
EcoT14I CCWWGG 4 cut(s) 19, 358, 730, 1078
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 4 cut(s) 19, 358, 730, 1078
Esp3I CGTCTC 1 cut(s) 915
FaeI CATG 5 cut(s) 223, 247, 688, 1121, 1333
FalI AAGNNNNNCTT 2 cut(s) 753, 785
FaqI GGGAC 4 cut(s) 205, 614, 894, 1163
FatI CATG 5 cut(s) 219, 243, 684, 1117, 1329
FauI CCCGC 6 cut(s) 433, 1102, 1140, 1215, 1249, 1377
FblI GTMKAC 3 cut(s) 30, 240, 726
FokI GGATG 4 cut(s) 418, 673, 677, 1025
FriOI GRGCYC 1 cut(s) 237
FspBI CTAG 5 cut(s) 20, 462, 479, 533, 731
GlaI GCGC 2 cut(s) 336, 1221
GsuI CTGGAG 3 cut(s) 801, 1157, 1415
HaeII RGCGCY 1 cut(s) 338
HgaI GACGC 2 cut(s) 278, 821
HhaI GCGC 2 cut(s) 337, 1222
Hin1II CATG 5 cut(s) 223, 247, 688, 1121, 1333
Hin6I GCGC 2 cut(s) 335, 1220
HinP1I GCGC 2 cut(s) 335, 1220
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HinfI GANTC 4 cut(s) 89, 346, 748, 1151
HphI GGTGA 8 cut(s) 113, 411, 460, 809, 1006, 1043, 1117, 1217
Hpy166II GTNNAC 6 cut(s) 31, 177, 241, 727, 800, 1002
Hpy188I TCNGA 5 cut(s) 76, 94, 165, 1282, 1452
Hpy188III TCNNGA 3 cut(s) 152, 809, 1330
Hpy8I GTNNAC 6 cut(s) 31, 177, 241, 727, 800, 1002
Hpy99I CGWCG 3 cut(s) 206, 728, 815
HpyAV CCTTC 6 cut(s) 223, 1083, 1120, 1135, 1247, 1402
HpyCH4III ACNGT 5 cut(s) 142, 196, 393, 448, 797
HpyCH4IV ACGT 2 cut(s) 723, 998
HpyCH4V TGCA 3 cut(s) 340, 715, 835
HpyF10VI GCNNNNNNNGC 3 cut(s) 317, 376, 406
HpyF3I CTNAG 7 cut(s) 290, 1164, 1179, 1215, 1279, 1363, 1449
HpySE526I ACGT 2 cut(s) 723, 998
Hsp92II CATG 5 cut(s) 223, 247, 688, 1121, 1333
HspAI GCGC 2 cut(s) 335, 1220
KpnI GGTACC 2 cut(s) 19, 1440
KspI CCGCGG 1 cut(s) 1245
Kzo9I GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
LmnI GCTCC 6 cut(s) 232, 357, 820, 924, 1144, 1195
Lsp1109I GCAGC 7 cut(s) 324, 387, 583, 847, 1195, 1291, 1294
LweI GCATC 4 cut(s) 396, 658, 697, 985
MaeI CTAG 5 cut(s) 20, 462, 479, 533, 731
MaeII ACGT 2 cut(s) 723, 998
MaeIII GTNAC 7 cut(s) 136, 417, 448, 481, 820, 936, 994
MalI GATC 7 cut(s) 118, 807, 961, 1050, 1060, 1233, 1467
MbiI CCGCTC 1 cut(s) 1147
MboI GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
MboII GAAGA 9 cut(s) 646, 716, 773, 964, 967, 1045, 1054, 1106, 1417
MflI RGATCY 2 cut(s) 116, 959
MhlI GDGCHC 1 cut(s) 237
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 2 cut(s) 35, 1376
MluNI TGGCCA 1 cut(s) 146
MlyI GAGTC 2 cut(s) 98, 1145
Mox20I TGGCCA 1 cut(s) 146
MscI TGGCCA 1 cut(s) 146
MseI TTAA 1 cut(s) 1338
MslI CAYNNNNRTG 2 cut(s) 224, 689
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 3 cut(s) 574, 1186, 1244
Mva1269I GAATGC 1 cut(s) 159
MvaI CCWGG 4 cut(s) 210, 698, 1019, 1394
MvnI CGCG 2 cut(s) 1222, 1244
MwoI GCNNNNNNNGC 3 cut(s) 317, 376, 406
NdeII GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
NlaIII CATG 5 cut(s) 223, 247, 688, 1121, 1333
NlaIV GGNNCC 7 cut(s) 17, 55, 129, 386, 602, 894, 1438
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 4 cut(s) 417, 448, 820, 994
NspI RCATGY 2 cut(s) 247, 688
PagI TCATGA 1 cut(s) 1329
PceI AGGCCT 1 cut(s) 286
PcsI WCGNNNNNNNCGW 1 cut(s) 743
PctI GAATGC 1 cut(s) 159
PfeI GAWTC 2 cut(s) 346, 748
PfoI TCCNGGA 2 cut(s) 597, 1392
PinAI ACCGGT 3 cut(s) 12, 578, 1439
PleI GAGTC 2 cut(s) 97, 1145
PpsI GAGTC 2 cut(s) 97, 1145
PpuMI RGGWCCY 1 cut(s) 54
Psp124BI GAGCTC 1 cut(s) 237
Psp5II RGGWCCY 1 cut(s) 54
Psp6I CCWGG 4 cut(s) 208, 696, 1017, 1392
PspEI GGTNACC 1 cut(s) 448
PspGI CCWGG 4 cut(s) 208, 696, 1017, 1392
PspN4I GGNNCC 7 cut(s) 17, 55, 129, 386, 602, 894, 1438
PspPI GGNCC 5 cut(s) 54, 127, 601, 892, 1064
PspPPI RGGWCCY 1 cut(s) 54
PstNI CAGNNNCTG 1 cut(s) 397
PsuI RGATCY 2 cut(s) 116, 959
PvuII CAGCTG 1 cut(s) 574
RseI CAYNNNNRTG 2 cut(s) 224, 689
SacI GAGCTC 1 cut(s) 237
SacII CCGCGG 1 cut(s) 1245
SalI GTCGAC 1 cut(s) 725
SaqAI TTAA 1 cut(s) 1338
Sau3AI GATC 7 cut(s) 116, 805, 959, 1048, 1058, 1231, 1465
Sau96I GGNCC 5 cut(s) 54, 127, 601, 892, 1064
SchI GAGTC 2 cut(s) 98, 1145
SduI GDGCHC 1 cut(s) 237
SfaNI GCATC 4 cut(s) 396, 658, 697, 985
SfcI CTRYAG 1 cut(s) 389
Sfr303I CCGCGG 1 cut(s) 1245
SgrBI CCGCGG 1 cut(s) 1245
SinI GGWCC 2 cut(s) 54, 601
SmaI CCCGGG 5 cut(s) 324, 647, 874, 946, 1056
SmiMI CAYNNNNRTG 2 cut(s) 224, 689
SmlI CTYRAG 1 cut(s) 1199
SmoI CTYRAG 1 cut(s) 1199
Sse9I AATT 2 cut(s) 35, 1376
SseBI AGGCCT 1 cut(s) 286
SspMI CTAG 5 cut(s) 20, 462, 479, 533, 731
SstI GAGCTC 1 cut(s) 237
StuI AGGCCT 1 cut(s) 286
StyI CCWWGG 4 cut(s) 19, 358, 730, 1078
TaaI ACNGT 5 cut(s) 142, 196, 393, 448, 797
TaiI ACGT 2 cut(s) 726, 1001
TaqI TCGA 6 cut(s) 9, 500, 726, 737, 759, 979
TaqII GACCGA 1 cut(s) 741
TasI AATT 2 cut(s) 35, 1376
TatI WGTACW 1 cut(s) 1269
TauI GCSGC 9 cut(s) 250, 311, 461, 478, 547, 550, 1355, 1424, 1427
TfiI GAWTC 2 cut(s) 346, 748
Tru1I TTAA 1 cut(s) 1338
Tru9I TTAA 1 cut(s) 1338
TscAI CASTG 5 cut(s) 147, 825, 903, 925, 1009
TseFI GTSAC 4 cut(s) 417, 448, 820, 994
TseI GCWGC 7 cut(s) 337, 400, 571, 835, 1183, 1304, 1307
Tsp45I GTSAC 4 cut(s) 417, 448, 820, 994
TspDTI ATGAA 4 cut(s) 242, 1106, 1346, 1383
TspMI CCCGGG 5 cut(s) 322, 645, 872, 944, 1054
TspRI CASTG 5 cut(s) 147, 825, 903, 925, 1009
VpaK11BI GGWCC 2 cut(s) 54, 601
XapI RAATTY 1 cut(s) 1376
XceI RCATGY 2 cut(s) 247, 688
XmaI CCCGGG 5 cut(s) 322, 645, 872, 944, 1054
XmaJI CCTAGG 2 cut(s) 19, 730
XmiI GTMKAC 3 cut(s) 30, 240, 726
XspI CTAG 5 cut(s) 20, 462, 479, 533, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.