Rmu_sc0003551.1_g000015

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003551.1
OG0000087
Physical Location & Seq
Forward (+)
54402 .. 56949
2548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003551.1_g000015.1.cds

Sequence Viewer

Length: 1722 bp
atggggaaagctttggccagaagagctactgtagaaggaaaaaaggtaagaggatgtgatatagcgaattttgaggtcccggttgacatagttcttaggatggaatcagaaaccatggccggggatgcgggatcgtcgaatcagtcttctgcgaggcaagtggaagcggatatcgaccttgaggagactgatgaaggtgagagcgagggtggatctgcggaggcgccggtagttacagtggctattcccgagggcatcccgaaacctaggtacactttagtggatgggactgtatgtgacgaacccgggagaagtatgactatgaaggagatcatcgccatgagactgaagtggggaataccggatgaggtagagcttaggcctctcaaggctggagagatggctgcgaatcctcccccgggatgggtggtactacacgagaaccatttccaccaagggatatcgctaccgctgccccggtgcctacagtatcttttgcggatgctgaacctgtcaccggggcagttgaccccgaatgcagtgcgacaaatacttagtatgatggccatgtgggacttgtgccagcaagggtggccttccataaatgaattccgcgcagtacacagggttctgtactcaaggaagcaatcatgtataggtacagtgacgtttgccgccagggactacgagcctttagttactgatatgcctacctcaatgagcaaaatgtggagaaataaggtatttcttgctggagggcgagcgccgaaaaggaagccccggaaaggtaagaaggacgactggatggacgacaaccagttgatggacatgctgatgagccagggagaagacgcccttcacattgaagtcgacctggacttgaaggctacgggtcgatcagttgaagaagccctactgaagattactgatgaaggatatggggagcctgaccctgatgctcccgtgacccaagtcgagcagccctctaccggggatgttgtcactatagctgatcccggaagggaaaaggtaccggtcgctgtatctctctcttctcgatccgctggaggtgacctatactggtcgggatgtcaaagaatctgtggcgaagaggcagaagaaaaatcctccgggaccagagtcatcgctctcgcttggcatgttgtccctgccatatcggtaatccccaagaagcccattaaacagctgttgagtgagtacggggttgctgatgagaatttcgtgcagtccatgctcgccgacctgaagcatatagacctcgatcgggtgcgggccaaagataatactccgcaagagaatcggcgccttacccgggagtcaatgatgcgggcactcttcaatgtatacgtgattgatgccagcgaggaagatacgcacctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggggagaaagccaagctggagaaggagcaggactccctgaaagagaagattaagtccttgactccgatagttaccgagctggatgcggcaaagagacgaattacggagcttgaaggacaaatgtatgaggcgagggatgaggtgaagagttcccgagactctgaaaaggaagctgcagaatcagccaagtcctggaagacgagggtagatcatctggatgagcaccttcccgtgcagaggcgcgaggccgtggaggagtacaagggctctcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

573

Amino Acids

63.88

Weight (kDa)

5.26

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1420
Acc36I ACCTGC 1 cut(s) 1420
Acc65I GGTACC 1 cut(s) 1030
AccB1I GGYRCC 4 cut(s) 223, 480, 1030, 1323
AccB7I CCANNNNNTGG 2 cut(s) 823, 1638
AccI GTMKAC 2 cut(s) 870, 1365
AccII CGCG 2 cut(s) 615, 1689
AclWI GGATC 4 cut(s) 139, 220, 1007, 1053
AcoI YGGCCR 3 cut(s) 15, 117, 564
AcsI RAATTY 3 cut(s) 67, 608, 1237
AcuI CTGAAG 4 cut(s) 368, 938, 1286, 1421
AcyI GRCGYC 3 cut(s) 224, 852, 1324
AfaI GTAC 8 cut(s) 272, 432, 621, 635, 661, 1032, 1220, 1706
AgeI ACCGGT 1 cut(s) 1033
AgsI TTSAA 5 cut(s) 866, 883, 905, 1360, 1559
AjnI CCWGG 4 cut(s) 677, 840, 873, 1637
AleI CACNNNNGTG 1 cut(s) 278
AluBI AGCT 9 cut(s) 11, 26, 376, 1010, 1207, 1462, 1525, 1555, 1619
AluI AGCT 9 cut(s) 11, 26, 376, 1010, 1207, 1462, 1525, 1555, 1619
Alw21I GWGCWC 1 cut(s) 1671
Alw26I GTCTC 4 cut(s) 179, 337, 1534, 1596
AlwI GGATC 4 cut(s) 139, 220, 1007, 1053
Ama87I CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
AoxI GGCC 7 cut(s) 15, 117, 380, 564, 593, 1293, 1692
ApeKI GCWGC 4 cut(s) 404, 472, 979, 1619
ApoI RAATTY 3 cut(s) 67, 608, 1237
AsiGI ACCGGT 1 cut(s) 1033
Asp700I GAANNNNTTC 1 cut(s) 446
Asp718I GGTACC 1 cut(s) 1030
AspA2I CCTAGG 1 cut(s) 266
AspLEI GCGC 5 cut(s) 226, 617, 766, 1326, 1689
AspS9I GGNCC 3 cut(s) 76, 1134, 1293
AsuHPI GGTGA 5 cut(s) 209, 507, 1082, 1444, 1600
AvaI CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
AvaII GGWCC 2 cut(s) 76, 1134
AvrII CCTAGG 1 cut(s) 266
BaeGI GKGCMC 1 cut(s) 1354
BalI TGGCCA 2 cut(s) 17, 566
BanI GGYRCC 4 cut(s) 223, 480, 1030, 1323
BanII GRGCYC 1 cut(s) 1715
BarI GAAGNNNNNNTAC 2 cut(s) 897, 929
BauI CACGAG 1 cut(s) 437
BbsI GAAGAC 3 cut(s) 138, 855, 1649
Bbv12I GWGCWC 1 cut(s) 1671
BbvI GCAGC 4 cut(s) 391, 459, 991, 1606
BccI CCATC 7 cut(s) 94, 278, 394, 417, 556, 799, 817
BceAI ACGGC 1 cut(s) 1679
BcgI CGANNNNNNTGC 6 cut(s) 523, 557, 1301, 1335, 1511, 1545
BciT130I CCWGG 4 cut(s) 679, 842, 875, 1639
BcoDI GTCTC 4 cut(s) 179, 337, 1534, 1596
BfaI CTAG 1 cut(s) 267
BfmI CTRYAG 4 cut(s) 30, 485, 1005, 1620
BfoI RGCGCY 3 cut(s) 227, 767, 1327
BfuAI ACCTGC 1 cut(s) 1420
BisI GCNGC 6 cut(s) 405, 473, 675, 980, 1533, 1620
BlnI CCTAGG 1 cut(s) 266
BlsI GCNGC 6 cut(s) 406, 474, 676, 981, 1534, 1621
Bme18I GGWCC 2 cut(s) 76, 1134
BmeT110I CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
BmgT120I GGNCC 3 cut(s) 76, 1134, 1293
BmiI GGNNCC 7 cut(s) 78, 225, 482, 945, 1032, 1135, 1325
BmsI GCATC 7 cut(s) 115, 264, 492, 946, 1335, 1366, 1519
BoxI GACNNNNGTC 2 cut(s) 971, 1139
BpiI GAAGAC 3 cut(s) 138, 855, 1649
BplI GAGNNNNNCTC 4 cut(s) 968, 1000, 1463, 1495
BpmI CTGGAG 4 cut(s) 414, 774, 1086, 1484
Bpu10I CCTNAGC 1 cut(s) 377
BpuEI CTTGAG 3 cut(s) 200, 371, 622
BsaAI YACGTR 1 cut(s) 1369
BsaHI GRCGYC 3 cut(s) 224, 852, 1324
BsaWI WCCGGW 2 cut(s) 361, 1033
Bse118I RCCGGY 2 cut(s) 226, 1033
Bse1I ACTGG 3 cut(s) 806, 817, 1085
BseBI CCWGG 4 cut(s) 679, 842, 875, 1639
BseNI ACTGG 3 cut(s) 806, 817, 1085
BseRI GAGGAG 3 cut(s) 197, 1421, 1715
BseSI GKGCMC 1 cut(s) 1354
BseXI GCAGC 4 cut(s) 391, 459, 991, 1606
BsgI GTGCAG 2 cut(s) 1265, 1700
Bsh1236I CGCG 2 cut(s) 615, 1689
Bsh1285I CGRYCG 2 cut(s) 1038, 1285
BshFI GGCC 7 cut(s) 17, 119, 382, 566, 595, 1295, 1694
BshNI GGYRCC 4 cut(s) 223, 480, 1030, 1323
BshTI ACCGGT 1 cut(s) 1033
BsiEI CGRYCG 2 cut(s) 1038, 1285
BsiHKAI GWGCWC 1 cut(s) 1671
BsiHKCI CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
BslFI GGGAC 6 cut(s) 62, 301, 587, 695, 1147, 1151
BsmAI GTCTC 4 cut(s) 179, 337, 1534, 1596
BsmBI CGTCTC 1 cut(s) 1534
BsmFI GGGAC 6 cut(s) 62, 301, 587, 695, 1147, 1151
BsmI GAATGC 1 cut(s) 541
BsnI GGCC 7 cut(s) 17, 119, 382, 566, 595, 1295, 1694
BsoBI CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
Bsp1286I GDGCHC 3 cut(s) 1354, 1671, 1715
Bsp143I GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
Bsp19I CCATGG 1 cut(s) 114
BspANI GGCC 7 cut(s) 17, 119, 382, 566, 595, 1295, 1694
BspFNI CGCG 2 cut(s) 615, 1689
BspLI GGNNCC 7 cut(s) 78, 225, 482, 945, 1032, 1135, 1325
BspMAI CTGCAG 1 cut(s) 1624
BspMI ACCTGC 1 cut(s) 1420
BspPI GGATC 4 cut(s) 139, 220, 1007, 1053
BspQI GCTCTTC 1 cut(s) 16
BspT107I GGYRCC 4 cut(s) 223, 480, 1030, 1323
BsrFI RCCGGY 2 cut(s) 226, 1033
BsrI ACTGG 3 cut(s) 806, 817, 1085
BssAI RCCGGY 2 cut(s) 226, 1033
BssMI GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
BssNAI GTATAC 1 cut(s) 1366
BssNI GRCGYC 3 cut(s) 224, 852, 1324
BssSI CACGAG 1 cut(s) 437
BssT1I CCWWGG 3 cut(s) 114, 266, 454
Bst1107I GTATAC 1 cut(s) 1366
Bst2BI CACGAG 1 cut(s) 437
Bst2UI CCWGG 4 cut(s) 679, 842, 875, 1639
Bst4CI ACNGT 5 cut(s) 31, 238, 292, 489, 664
Bst6I CTCTTC 5 cut(s) 16, 1057, 1104, 1361, 1586
BstACI GRCGYC 3 cut(s) 224, 852, 1324
BstAPI GCANNNNNTGC 1 cut(s) 1252
BstBAI YACGTR 1 cut(s) 1369
BstC8I GCNNGC 6 cut(s) 584, 762, 1257, 1293, 1350, 1381
BstDEI CTNAG 3 cut(s) 95, 377, 554
BstDSI CCRYGG 2 cut(s) 114, 1695
BstEII GGTNACC 1 cut(s) 1070
BstENI CCTNNNNNAGG 1 cut(s) 1403
BstFNI CGCG 2 cut(s) 615, 1689
BstH2I RGCGCY 3 cut(s) 227, 767, 1327
BstHHI GCGC 5 cut(s) 226, 617, 766, 1326, 1689
BstKTI GATC 8 cut(s) 134, 215, 333, 899, 1015, 1061, 1285, 1657
BstMAI GTCTC 4 cut(s) 179, 337, 1534, 1596
BstMBI GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
BstMCI CGRYCG 2 cut(s) 1038, 1285
BstMWI GCNNNNNNNGC 6 cut(s) 23, 125, 472, 592, 1252, 1628
BstNI CCWGG 4 cut(s) 679, 842, 875, 1639
BstNSI RCATGY 2 cut(s) 832, 1163
BstPAI GACNNNNGTC 2 cut(s) 971, 1139
BstPI GGTNACC 1 cut(s) 1070
BstSFI CTRYAG 4 cut(s) 30, 485, 1005, 1620
BstSLI GKGCMC 1 cut(s) 1354
BstUI CGCG 2 cut(s) 615, 1689
BstV1I GCAGC 4 cut(s) 391, 459, 991, 1606
BstV2I GAAGAC 3 cut(s) 138, 855, 1649
BstX2I RGATCY 1 cut(s) 212
BstYI RGATCY 1 cut(s) 212
BstZ17I GTATAC 1 cut(s) 1366
BsuRI GGCC 7 cut(s) 17, 119, 382, 566, 595, 1295, 1694
BtgI CCRYGG 2 cut(s) 114, 1695
BtgZI GCGATG 2 cut(s) 319, 1129
BtsI GCAGTG 1 cut(s) 546
BtsIMutI CAGTG 3 cut(s) 243, 546, 669
BveI ACCTGC 1 cut(s) 1420
Cac8I GCNNGC 6 cut(s) 584, 762, 1257, 1293, 1350, 1381
CfoI GCGC 5 cut(s) 226, 617, 766, 1326, 1689
Cfr10I RCCGGY 2 cut(s) 226, 1033
Cfr13I GGNCC 3 cut(s) 76, 1134, 1293
Cfr9I CCCGGG 3 cut(s) 305, 418, 1332
CseI GACGC 1 cut(s) 860
Csp6I GTAC 8 cut(s) 271, 431, 620, 634, 660, 1031, 1219, 1705
CspAI ACCGGT 1 cut(s) 1033
CviAII CATG 8 cut(s) 115, 340, 568, 651, 829, 1160, 1252, 1445
CviQI GTAC 8 cut(s) 271, 431, 620, 634, 660, 1031, 1219, 1705
DdeI CTNAG 3 cut(s) 95, 377, 554
DinI GGCGCC 2 cut(s) 225, 1325
DpnI GATC 8 cut(s) 133, 214, 332, 898, 1014, 1060, 1284, 1656
DpnII GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
EaeI YGGCCR 3 cut(s) 15, 117, 564
Eam1104I CTCTTC 5 cut(s) 16, 1057, 1104, 1361, 1586
EarI CTCTTC 5 cut(s) 16, 1057, 1104, 1361, 1586
Eco130I CCWWGG 3 cut(s) 114, 266, 454
Eco147I AGGCCT 1 cut(s) 382
Eco24I GRGCYC 1 cut(s) 1715
Eco32I GATATC 2 cut(s) 172, 462
Eco47I GGWCC 2 cut(s) 76, 1134
Eco57I CTGAAG 4 cut(s) 368, 938, 1286, 1421
Eco88I CYCGRG 5 cut(s) 248, 305, 418, 1332, 1599
Eco91I GGTNACC 1 cut(s) 1070
EcoNI CCTNNNNNAGG 1 cut(s) 1403
EcoO109I RGGNCCY 1 cut(s) 76
EcoO65I GGTNACC 1 cut(s) 1070
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 4 cut(s) 677, 840, 873, 1637
EcoRV GATATC 2 cut(s) 172, 462
EcoT14I CCWWGG 3 cut(s) 114, 266, 454
EcoT38I GRGCYC 1 cut(s) 1715
EgeI GGCGCC 2 cut(s) 225, 1325
EheI GGCGCC 2 cut(s) 225, 1325
ErhI CCWWGG 3 cut(s) 114, 266, 454
Esp3I CGTCTC 1 cut(s) 1534
FaeI CATG 8 cut(s) 118, 343, 571, 654, 832, 1163, 1255, 1448
FalI AAGNNNNNCTT 2 cut(s) 840, 872
FaqI GGGAC 6 cut(s) 62, 301, 587, 695, 1147, 1151
FatI CATG 8 cut(s) 114, 339, 567, 650, 828, 1159, 1251, 1444
FauI CCCGC 3 cut(s) 121, 1284, 1341
FblI GTMKAC 2 cut(s) 870, 1365
Fnu4HI GCNGC 6 cut(s) 405, 473, 675, 980, 1533, 1620
FriOI GRGCYC 1 cut(s) 1715
Fsp4HI GCNGC 6 cut(s) 405, 473, 675, 980, 1533, 1620
FspBI CTAG 1 cut(s) 267
GlaI GCGC 5 cut(s) 225, 616, 765, 1325, 1688
GluI GCNGC 6 cut(s) 405, 473, 675, 980, 1533, 1620
GsuI CTGGAG 4 cut(s) 414, 774, 1086, 1484
HaeII RGCGCY 3 cut(s) 227, 767, 1327
HaeIII GGCC 7 cut(s) 17, 119, 382, 566, 595, 1295, 1694
HgaI GACGC 1 cut(s) 860
HhaI GCGC 5 cut(s) 226, 617, 766, 1326, 1689
Hin1I GRCGYC 3 cut(s) 224, 852, 1324
Hin1II CATG 8 cut(s) 118, 343, 571, 654, 832, 1163, 1255, 1448
Hin6I GCGC 5 cut(s) 224, 615, 764, 1324, 1687
HinP1I GCGC 5 cut(s) 224, 615, 764, 1324, 1687
HincII GTYRAC 3 cut(s) 85, 528, 871
HindII GTYRAC 3 cut(s) 85, 528, 871
HindIII AAGCTT 1 cut(s) 9
HphI GGTGA 5 cut(s) 209, 507, 1082, 1444, 1600
Hpy166II GTNNAC 6 cut(s) 85, 273, 528, 622, 871, 1366
Hpy188I TCNGA 3 cut(s) 109, 1512, 1609
Hpy188III TCNNGA 6 cut(s) 248, 259, 1056, 1086, 1599, 1661
Hpy8I GTNNAC 6 cut(s) 85, 273, 528, 622, 871, 1366
Hpy99I CGWCG 1 cut(s) 139
HpyCH4III ACNGT 5 cut(s) 31, 238, 292, 489, 664
HpyCH4IV ACGT 2 cut(s) 668, 1368
HpyCH4V TGCA 5 cut(s) 539, 1246, 1444, 1622, 1681
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 125, 472, 592, 1252, 1628
HpyF3I CTNAG 3 cut(s) 95, 377, 554
HpySE526I ACGT 2 cut(s) 668, 1368
Hsp92I GRCGYC 3 cut(s) 224, 852, 1324
Hsp92II CATG 8 cut(s) 118, 343, 571, 654, 832, 1163, 1255, 1448
HspAI GCGC 5 cut(s) 224, 615, 764, 1324, 1687
KasI GGCGCC 2 cut(s) 223, 1323
KpnI GGTACC 1 cut(s) 1034
Kzo9I GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
LguI GCTCTTC 1 cut(s) 16
LmnI GCTCC 4 cut(s) 943, 964, 1471, 1552
Lsp1109I GCAGC 4 cut(s) 391, 459, 991, 1606
LweI GCATC 7 cut(s) 115, 264, 492, 946, 1335, 1366, 1519
MaeI CTAG 1 cut(s) 267
MaeII ACGT 2 cut(s) 668, 1368
MaeIII GTNAC 9 cut(s) 232, 296, 513, 664, 697, 964, 1000, 1070, 1516
MalI GATC 8 cut(s) 133, 214, 332, 898, 1014, 1060, 1284, 1656
MboI GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
MflI RGATCY 1 cut(s) 212
MhlI GDGCHC 3 cut(s) 1354, 1671, 1715
MlsI TGGCCA 2 cut(s) 17, 566
MluCI AATT 4 cut(s) 67, 608, 1237, 1545
MluNI TGGCCA 2 cut(s) 17, 566
Mly113I GGCGCC 2 cut(s) 224, 1324
MlyI GAGTC 5 cut(s) 1149, 1346, 1472, 1501, 1598
Mox20I TGGCCA 2 cut(s) 17, 566
MroXI GAANNNNTTC 1 cut(s) 446
MscI TGGCCA 2 cut(s) 17, 566
MseI TTAA 2 cut(s) 1200, 1497
MslI CAYNNNNRTG 4 cut(s) 278, 338, 833, 1662
Msp20I TGGCCA 2 cut(s) 17, 566
MspA1I CMGCKG 3 cut(s) 472, 1064, 1207
Mva1269I GAATGC 1 cut(s) 541
MvaI CCWGG 4 cut(s) 679, 842, 875, 1639
MvnI CGCG 2 cut(s) 615, 1689
MwoI GCNNNNNNNGC 6 cut(s) 23, 125, 472, 592, 1252, 1628
NarI GGCGCC 2 cut(s) 224, 1324
NcoI CCATGG 1 cut(s) 114
NdeII GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
NlaIII CATG 8 cut(s) 118, 343, 571, 654, 832, 1163, 1255, 1448
NlaIV GGNNCC 7 cut(s) 78, 225, 482, 945, 1032, 1135, 1325
NmuCI GTSAC 6 cut(s) 296, 513, 664, 964, 1000, 1070
NspI RCATGY 2 cut(s) 832, 1163
OliI CACNNNNGTG 1 cut(s) 278
PaqCI CACCTGC 1 cut(s) 1420
PceI AGGCCT 1 cut(s) 382
PciSI GCTCTTC 1 cut(s) 16
PctI GAATGC 1 cut(s) 541
PdmI GAANNNNTTC 1 cut(s) 446
PfeI GAWTC 6 cut(s) 104, 139, 409, 1098, 1318, 1625
PflMI CCANNNNNTGG 2 cut(s) 823, 1638
PfoI TCCNGGA 3 cut(s) 1015, 1130, 1637
PinAI ACCGGT 1 cut(s) 1033
PkrI GCNGC 6 cut(s) 406, 474, 676, 981, 1534, 1621
Ple19I CGATCG 1 cut(s) 1285
PleI GAGTC 5 cut(s) 1148, 1345, 1472, 1501, 1598
PluTI GGCGCC 2 cut(s) 227, 1327
PpsI GAGTC 5 cut(s) 1148, 1345, 1472, 1501, 1598
Ppu21I YACGTR 1 cut(s) 1369
PpuMI RGGWCCY 1 cut(s) 76
PshAI GACNNNNGTC 2 cut(s) 971, 1139
Psp5II RGGWCCY 1 cut(s) 76
Psp6I CCWGG 4 cut(s) 677, 840, 873, 1637
PspEI GGTNACC 1 cut(s) 1070
PspGI CCWGG 4 cut(s) 677, 840, 873, 1637
PspN4I GGNNCC 7 cut(s) 78, 225, 482, 945, 1032, 1135, 1325
PspPI GGNCC 3 cut(s) 76, 1134, 1293
PspPPI RGGWCCY 1 cut(s) 76
PsrI GAACNNNNNNTAC 2 cut(s) 612, 644
PstI CTGCAG 1 cut(s) 1624
PsuI RGATCY 1 cut(s) 212
PvuI CGATCG 1 cut(s) 1285
PvuII CAGCTG 1 cut(s) 1207
RsaI GTAC 8 cut(s) 272, 432, 621, 635, 661, 1032, 1220, 1706
RsaNI GTAC 8 cut(s) 271, 431, 620, 634, 660, 1031, 1219, 1705
RseI CAYNNNNRTG 4 cut(s) 278, 338, 833, 1662
SalI GTCGAC 1 cut(s) 869
SapI GCTCTTC 1 cut(s) 16
SaqAI TTAA 2 cut(s) 1200, 1497
SatI GCNGC 6 cut(s) 405, 473, 675, 980, 1533, 1620
Sau3AI GATC 8 cut(s) 131, 212, 330, 896, 1012, 1058, 1282, 1654
Sau96I GGNCC 3 cut(s) 76, 1134, 1293
SchI GAGTC 5 cut(s) 1149, 1346, 1472, 1501, 1598
SduI GDGCHC 3 cut(s) 1354, 1671, 1715
SfaNI GCATC 7 cut(s) 115, 264, 492, 946, 1335, 1366, 1519
SfcI CTRYAG 4 cut(s) 30, 485, 1005, 1620
SfoI GGCGCC 2 cut(s) 225, 1325
SinI GGWCC 2 cut(s) 76, 1134
SmaI CCCGGG 3 cut(s) 307, 420, 1334
SmiMI CAYNNNNRTG 4 cut(s) 278, 338, 833, 1662
SmlI CTYRAG 3 cut(s) 179, 386, 637
SmoI CTYRAG 3 cut(s) 179, 386, 637
Sse9I AATT 4 cut(s) 67, 608, 1237, 1545
SseBI AGGCCT 1 cut(s) 382
SspDI GGCGCC 2 cut(s) 223, 1323
SspMI CTAG 1 cut(s) 267
StuI AGGCCT 1 cut(s) 382
StyI CCWWGG 3 cut(s) 114, 266, 454
TaaI ACNGT 5 cut(s) 31, 238, 292, 489, 664
TaiI ACGT 2 cut(s) 671, 1371
TaqI TCGA 7 cut(s) 137, 174, 870, 895, 975, 1057, 1281
TasI AATT 4 cut(s) 67, 608, 1237, 1545
TatI WGTACW 3 cut(s) 619, 633, 1704
TauI GCSGC 2 cut(s) 677, 1535
TfiI GAWTC 6 cut(s) 104, 139, 409, 1098, 1318, 1625
Tru1I TTAA 2 cut(s) 1200, 1497
Tru9I TTAA 2 cut(s) 1200, 1497
TscAI CASTG 3 cut(s) 243, 546, 669
TseFI GTSAC 6 cut(s) 296, 513, 664, 964, 1000, 1070
TseI GCWGC 4 cut(s) 404, 472, 979, 1619
Tsp45I GTSAC 6 cut(s) 296, 513, 664, 964, 1000, 1070
TspDTI ATGAA 4 cut(s) 207, 338, 621, 945
TspGWI ACGGA 1 cut(s) 1565
TspMI CCCGGG 3 cut(s) 305, 418, 1332
TspRI CASTG 3 cut(s) 243, 546, 669
Van91I CCANNNNNTGG 2 cut(s) 823, 1638
VpaK11BI GGWCC 2 cut(s) 76, 1134
XagI CCTNNNNNAGG 1 cut(s) 1403
XapI RAATTY 3 cut(s) 67, 608, 1237
XceI RCATGY 2 cut(s) 832, 1163
XmaI CCCGGG 3 cut(s) 305, 418, 1332
XmaJI CCTAGG 1 cut(s) 266
XmiI GTMKAC 2 cut(s) 870, 1365
XmnI GAANNNNTTC 1 cut(s) 446
XspI CTAG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.