Rmu_sc0002786.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002786.1
OG0000087
Physical Location & Seq
Forward (+)
22448 .. 24355
1908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002786.1_g000006.1.cds

Sequence Viewer

Length: 1386 bp
atgggtggcgctgcacgagaaccaattctaccaagggatgtcattaccgctgccccggtgcctatagtatctcttgaggatgctaaacctgtcaccggggcagctgactctgaatgcttggcgtcaaattttgagtatgatggccatgtgggacttgtgccagcaagggtagcccaccatcaacgaattccgagccgtgtaccaggttctatactcaagggaacaatcgtgtcaaggtacgtgaaagtgccgaagaggaaaccccggaaaggtaaggaggacgacaagaagaatgacaacaagttgatggacatgctcatgagccaaggagaggatgccttgcatattgacgttgacctggctttaaaggctacgggtcgttcaattaaagaatttctcctcaagattcctgacgaagggtacgggaaccctgatcctgaaggccccgttactcagagtgagcagcctattaccggggacgtagttaccattgctgatcccagaagaggaaaggtgctggtgtctggctcagtctcttcccattccgctgggtcagctggaatagaggaggccctgctttcgggtgagaagaaaaggttccataggcaccgccattggagcggggacaaggaggaggttacctacaccggtgaagacattatagggatgggacccaagaggcagaagaaaagtcatcggggaccaaagctgttgccgtcacttgggattttatctttggccataccactagtccccaagaagcccataaagcaactgttgagcgagtacggggttgcttatgaaaagttcgtgagttctatgcttgctgatctgaaggacatagacttcaaccgggcattgttcaacgtgtacgtgaccgacgctagtgaggaagatactcaattgaaggaagaggttagtaacctttccgggcaagtgaagtatcttcatggggagaaggcaatgctggagaaggagcgggactctttgaagaggaaggtagagtccctaactcctaaggtaaccgaactggaggcggcggagaaaagaatctcggagcttgaaagcgaacttgctggggcaaagactgagatagaaagtgcccgggactccgtgaaagaagctaaagaatctgccaagtcatggaaggcaaaaatagagcatctggaggagcgccttcctattgaaaggcaagaggctgttgcttggtttaagggctcccaagagcttatcgatatgctactcgctactcaggacaaagccgtgatcactaagtataaagagtgggtggcagctgggtacctggatgaagccaaattcaggcggggactgctggagaaaaagaataaggaactggaggccaaggagagagaacagggaagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

461

Amino Acids

51.06

Weight (kDa)

6.87

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1299
AccB1I GGYRCC 3 cut(s) 58, 606, 1299
AccB7I CCANNNNNTGG 1 cut(s) 1143
AccBSI CCGCTC 2 cut(s) 621, 979
AciI CCGC 8 cut(s) 48, 546, 610, 621, 979, 1037, 1040, 1324
AclWI GGATC 2 cut(s) 428, 491
AcoI YGGCCR 2 cut(s) 142, 738
AcsI RAATTY 4 cut(s) 127, 186, 392, 1316
AcuI CTGAAG 2 cut(s) 459, 854
AcyI GRCGYC 1 cut(s) 122
AfaI GTAC 6 cut(s) 201, 239, 422, 788, 872, 1301
AflIII ACRYGT 1 cut(s) 867
AgeI ACCGGT 1 cut(s) 647
AgsI TTSAA 7 cut(s) 384, 850, 865, 907, 991, 1064, 1187
AhlI ACTAGT 1 cut(s) 748
AjnI CCWGG 3 cut(s) 202, 357, 1302
AluBI AGCT 8 cut(s) 104, 557, 709, 1060, 1124, 1228, 1295, 1383
AluI AGCT 8 cut(s) 104, 557, 709, 1060, 1124, 1228, 1295, 1383
Alw26I GTCTC 1 cut(s) 538
AlwI GGATC 2 cut(s) 428, 491
Ama87I CYCGRG 1 cut(s) 1104
AoxI GGCC 5 cut(s) 142, 442, 570, 738, 1359
ApeKI GCWGC 5 cut(s) 11, 50, 101, 463, 1292
ApoI RAATTY 4 cut(s) 127, 186, 392, 1316
AsiGI ACCGGT 1 cut(s) 647
Asp700I GAANNNNTTC 2 cut(s) 24, 596
Asp718I GGTACC 1 cut(s) 1299
AspLEI GCGC 2 cut(s) 11, 1176
AspS9I GGNCC 4 cut(s) 443, 571, 671, 701
AsuC2I CCSGG 8 cut(s) 56, 97, 265, 475, 854, 931, 1105, 1106
AsuHPI GGTGA 3 cut(s) 85, 596, 662
AvaI CYCGRG 1 cut(s) 1104
AvaII GGWCC 2 cut(s) 671, 701
AxyI CCTNAGG 1 cut(s) 1017
BaeGI GKGCMC 1 cut(s) 1105
BalI TGGCCA 2 cut(s) 144, 740
BanI GGYRCC 3 cut(s) 58, 606, 1299
BanII GRGCYC 1 cut(s) 1220
BauI CACGAG 1 cut(s) 15
BbsI GAAGAC 1 cut(s) 660
BbvI GCAGC 4 cut(s) 37, 113, 475, 1304
BccI CCATC 4 cut(s) 134, 186, 301, 661
BceAI ACGGC 3 cut(s) 180, 700, 1247
BciT130I CCWGG 3 cut(s) 204, 359, 1304
BclI TGATCA 1 cut(s) 1266
BcnI CCSGG 8 cut(s) 56, 97, 265, 475, 854, 931, 1105, 1106
BcoDI GTCTC 1 cut(s) 538
BcuI ACTAGT 1 cut(s) 748
BfaI CTAG 3 cut(s) 749, 885, 1384
BfmI CTRYAG 1 cut(s) 63
BfoI RGCGCY 2 cut(s) 12, 1177
BisI GCNGC 6 cut(s) 12, 51, 102, 464, 1038, 1293
BlsI GCNGC 6 cut(s) 13, 52, 103, 465, 1039, 1294
Bme18I GGWCC 2 cut(s) 671, 701
BmeT110I CYCGRG 1 cut(s) 1104
BmgT120I GGNCC 4 cut(s) 443, 571, 671, 701
BmsI GCATC 3 cut(s) 70, 325, 1171
BpiI GAAGAC 1 cut(s) 660
BplI GAGNNNNNCTC 2 cut(s) 968, 1000
BpmI CTGGAG 5 cut(s) 989, 1052, 1187, 1355, 1376
BpuEI CTTGAG 3 cut(s) 95, 200, 386
BpuMI CCSGG 8 cut(s) 56, 97, 265, 475, 854, 931, 1105, 1106
Bsa29I ATCGAT 1 cut(s) 1233
BsaAI YACGTR 2 cut(s) 241, 874
BsaHI GRCGYC 1 cut(s) 122
BsaJI CCNNGG 8 cut(s) 32, 54, 96, 263, 325, 474, 1104, 1362
BsaWI WCCGGW 1 cut(s) 647
Bse118I RCCGGY 1 cut(s) 647
Bse1I ACTGG 2 cut(s) 1035, 1359
Bse21I CCTNAGG 1 cut(s) 1017
Bse3DI GCAATG 2 cut(s) 489, 969
BseBI CCWGG 3 cut(s) 204, 359, 1304
BseCI ATCGAT 1 cut(s) 1233
BseDI CCNNGG 8 cut(s) 32, 54, 96, 263, 325, 474, 1104, 1362
BseGI GGATG 5 cut(s) 43, 85, 340, 672, 1312
BseMI GCAATG 2 cut(s) 489, 969
BseMII CTCAG 4 cut(s) 467, 543, 1080, 1265
BseNI ACTGG 2 cut(s) 1035, 1359
BseRI GAGGAG 4 cut(s) 389, 581, 647, 1184
BseSI GKGCMC 1 cut(s) 1105
BseXI GCAGC 4 cut(s) 37, 113, 475, 1304
BseYI CCCAGC 3 cut(s) 548, 1076, 1295
BshFI GGCC 5 cut(s) 144, 444, 572, 740, 1361
BshNI GGYRCC 3 cut(s) 58, 606, 1299
BshTI ACCGGT 1 cut(s) 647
BshVI ATCGAT 1 cut(s) 1233
BsiHKCI CYCGRG 1 cut(s) 1104
BsiSI CCGG 8 cut(s) 56, 96, 265, 474, 648, 853, 930, 1105
BsmAI GTCTC 1 cut(s) 538
BsmI GAATGC 1 cut(s) 119
BsnI GGCC 5 cut(s) 144, 444, 572, 740, 1361
BsoBI CYCGRG 1 cut(s) 1104
Bsp1286I GDGCHC 2 cut(s) 1105, 1220
Bsp143I GATC 4 cut(s) 433, 496, 829, 1266
BspACI CCGC 8 cut(s) 48, 546, 610, 621, 979, 1037, 1040, 1324
BspANI GGCC 5 cut(s) 144, 444, 572, 740, 1361
BspCNI CTCAG 4 cut(s) 466, 542, 1081, 1264
BspDI ATCGAT 1 cut(s) 1233
BspHI TCATGA 1 cut(s) 318
BspPI GGATC 2 cut(s) 428, 491
BspT107I GGYRCC 3 cut(s) 58, 606, 1299
BsrBI CCGCTC 2 cut(s) 621, 979
BsrDI GCAATG 2 cut(s) 489, 969
BsrFI RCCGGY 1 cut(s) 647
BsrI ACTGG 2 cut(s) 1035, 1359
BssAI RCCGGY 1 cut(s) 647
BssECI CCNNGG 8 cut(s) 32, 54, 96, 263, 325, 474, 1104, 1362
BssMI GATC 4 cut(s) 433, 496, 829, 1266
BssNI GRCGYC 1 cut(s) 122
BssSI CACGAG 1 cut(s) 15
BssT1I CCWWGG 3 cut(s) 32, 325, 1362
Bst2BI CACGAG 1 cut(s) 15
Bst2UI CCWGG 3 cut(s) 204, 359, 1304
Bst4CI ACNGT 1 cut(s) 777
Bst6I CTCTTC 5 cut(s) 248, 499, 541, 906, 986
BstACI GRCGYC 1 cut(s) 122
BstBAI YACGTR 2 cut(s) 241, 874
BstC8I GCNNGC 2 cut(s) 162, 825
BstDEI CTNAG 6 cut(s) 453, 529, 1017, 1089, 1251, 1272
BstEII GGTNACC 2 cut(s) 637, 1021
BstENI CCTNNNNNAGG 1 cut(s) 414
BstF5I GGATG 5 cut(s) 43, 85, 340, 672, 1312
BstH2I RGCGCY 2 cut(s) 12, 1177
BstHHI GCGC 2 cut(s) 11, 1176
BstKTI GATC 4 cut(s) 436, 499, 832, 1269
BstMAI GTCTC 1 cut(s) 538
BstMBI GATC 4 cut(s) 433, 496, 829, 1266
BstMWI GCNNNNNNNGC 6 cut(s) 170, 368, 554, 618, 769, 1330
BstNI CCWGG 3 cut(s) 204, 359, 1304
BstNSI RCATGY 1 cut(s) 316
BstPI GGTNACC 2 cut(s) 637, 1021
BstSFI CTRYAG 1 cut(s) 63
BstSLI GKGCMC 1 cut(s) 1105
BstV1I GCAGC 4 cut(s) 37, 113, 475, 1304
BstV2I GAAGAC 1 cut(s) 660
BstXI CCANNNNNNTGG 1 cut(s) 548
Bsu15I ATCGAT 1 cut(s) 1233
Bsu36I CCTNAGG 1 cut(s) 1017
BsuRI GGCC 5 cut(s) 144, 444, 572, 740, 1361
BsuTUI ATCGAT 1 cut(s) 1233
BtsCI GGATG 5 cut(s) 43, 85, 340, 672, 1312
Cac8I GCNNGC 2 cut(s) 162, 825
CciI TCATGA 1 cut(s) 318
CfoI GCGC 2 cut(s) 11, 1176
Cfr10I RCCGGY 1 cut(s) 647
Cfr13I GGNCC 4 cut(s) 443, 571, 671, 701
Cfr9I CCCGGG 1 cut(s) 1104
ClaI ATCGAT 1 cut(s) 1233
CseI GACGC 2 cut(s) 111, 890
CsiI ACCWGGT 1 cut(s) 202
Csp6I GTAC 6 cut(s) 200, 238, 421, 787, 871, 1300
CspAI ACCGGT 1 cut(s) 647
CviAII CATG 5 cut(s) 146, 313, 319, 950, 1143
CviQI GTAC 6 cut(s) 200, 238, 421, 787, 871, 1300
DdeI CTNAG 6 cut(s) 453, 529, 1017, 1089, 1251, 1272
DpnI GATC 4 cut(s) 435, 498, 831, 1268
DpnII GATC 4 cut(s) 433, 496, 829, 1266
DraI TTTAAA 1 cut(s) 366
EaeI YGGCCR 2 cut(s) 142, 738
Eam1104I CTCTTC 5 cut(s) 248, 499, 541, 906, 986
EarI CTCTTC 5 cut(s) 248, 499, 541, 906, 986
EciI GGCGGA 1 cut(s) 1055
Eco130I CCWWGG 3 cut(s) 32, 325, 1362
Eco24I GRGCYC 1 cut(s) 1220
Eco47I GGWCC 2 cut(s) 671, 701
Eco57I CTGAAG 2 cut(s) 459, 854
Eco81I CCTNAGG 1 cut(s) 1017
Eco88I CYCGRG 1 cut(s) 1104
Eco91I GGTNACC 2 cut(s) 637, 1021
EcoNI CCTNNNNNAGG 1 cut(s) 414
EcoO109I RGGNCCY 3 cut(s) 443, 571, 671
EcoO65I GGTNACC 2 cut(s) 637, 1021
EcoRI GAATTC 1 cut(s) 186
EcoRII CCWGG 3 cut(s) 202, 357, 1302
EcoT14I CCWWGG 3 cut(s) 32, 325, 1362
EcoT38I GRGCYC 1 cut(s) 1220
ErhI CCWWGG 3 cut(s) 32, 325, 1362
FaeI CATG 5 cut(s) 149, 316, 322, 953, 1146
FatI CATG 5 cut(s) 145, 312, 318, 949, 1142
FauI CCCGC 3 cut(s) 614, 972, 1317
FbaI TGATCA 1 cut(s) 1266
Fnu4HI GCNGC 6 cut(s) 12, 51, 102, 464, 1038, 1293
FokI GGATG 5 cut(s) 50, 92, 347, 679, 1319
FriOI GRGCYC 1 cut(s) 1220
Fsp4HI GCNGC 6 cut(s) 12, 51, 102, 464, 1038, 1293
FspBI CTAG 3 cut(s) 749, 885, 1384
GlaI GCGC 2 cut(s) 10, 1175
GluI GCNGC 6 cut(s) 12, 51, 102, 464, 1038, 1293
GsaI CCCAGC 3 cut(s) 552, 1080, 1299
GsuI CTGGAG 5 cut(s) 989, 1052, 1187, 1355, 1376
HaeII RGCGCY 2 cut(s) 12, 1177
HaeIII GGCC 5 cut(s) 144, 444, 572, 740, 1361
HapII CCGG 8 cut(s) 56, 96, 265, 474, 648, 853, 930, 1105
HgaI GACGC 2 cut(s) 111, 890
HhaI GCGC 2 cut(s) 11, 1176
Hin1I GRCGYC 1 cut(s) 122
Hin1II CATG 5 cut(s) 149, 316, 322, 953, 1146
Hin6I GCGC 2 cut(s) 9, 1174
HinP1I GCGC 2 cut(s) 9, 1174
HincII GTYRAC 1 cut(s) 355
HindII GTYRAC 1 cut(s) 355
HinfI GANTC 7 cut(s) 107, 406, 983, 1004, 1050, 1109, 1130
HpaII CCGG 8 cut(s) 56, 96, 265, 474, 648, 853, 930, 1105
HphI GGTGA 3 cut(s) 85, 596, 662
Hpy166II GTNNAC 3 cut(s) 200, 355, 871
Hpy188I TCNGA 5 cut(s) 112, 192, 456, 834, 1057
Hpy188III TCNNGA 8 cut(s) 74, 319, 403, 410, 437, 811, 1166, 1253
Hpy8I GTNNAC 3 cut(s) 200, 355, 871
Hpy99I CGWCG 1 cut(s) 884
HpyAV CCTTC 9 cut(s) 410, 434, 829, 901, 952, 967, 991, 1141, 1187
HpyCH4III ACNGT 1 cut(s) 777
HpyCH4IV ACGT 5 cut(s) 240, 351, 480, 867, 873
HpyCH4V TGCA 2 cut(s) 14, 343
HpyF10VI GCNNNNNNNGC 6 cut(s) 170, 368, 554, 618, 769, 1330
HpyF3I CTNAG 6 cut(s) 453, 529, 1017, 1089, 1251, 1272
HpySE526I ACGT 5 cut(s) 240, 351, 480, 867, 873
Hsp92I GRCGYC 1 cut(s) 122
Hsp92II CATG 5 cut(s) 149, 316, 322, 953, 1146
HspAI GCGC 2 cut(s) 9, 1174
KflI GGGWCCC 1 cut(s) 671
KpnI GGTACC 1 cut(s) 1303
Ksp22I TGATCA 1 cut(s) 1266
Kzo9I GATC 4 cut(s) 433, 496, 829, 1266
LmnI GCTCC 5 cut(s) 618, 976, 1057, 1171, 1223
Lsp1109I GCAGC 4 cut(s) 37, 113, 475, 1304
LweI GCATC 3 cut(s) 70, 325, 1171
MabI ACCWGGT 1 cut(s) 202
MaeI CTAG 3 cut(s) 749, 885, 1384
MaeII ACGT 5 cut(s) 240, 351, 480, 867, 873
MaeIII GTNAC 8 cut(s) 91, 448, 484, 637, 717, 874, 920, 1021
MalI GATC 4 cut(s) 435, 498, 831, 1268
MbiI CCGCTC 2 cut(s) 621, 979
MboI GATC 4 cut(s) 433, 496, 829, 1266
MfeI CAATTG 1 cut(s) 902
MhlI GDGCHC 2 cut(s) 1105, 1220
MlsI TGGCCA 2 cut(s) 144, 740
MluCI AATT 7 cut(s) 24, 127, 186, 384, 392, 902, 1316
MluNI TGGCCA 2 cut(s) 144, 740
MlyI GAGTC 4 cut(s) 101, 977, 1013, 1103
Mox20I TGGCCA 2 cut(s) 144, 740
MroXI GAANNNNTTC 2 cut(s) 24, 596
MscI TGGCCA 2 cut(s) 144, 740
MseI TTAA 3 cut(s) 365, 387, 1212
MslI CAYNNNNRTG 1 cut(s) 317
Msp20I TGGCCA 2 cut(s) 144, 740
MspA1I CMGCKG 5 cut(s) 50, 104, 548, 557, 1295
MspI CCGG 8 cut(s) 56, 96, 265, 474, 648, 853, 930, 1105
MunI CAATTG 1 cut(s) 902
Mva1269I GAATGC 1 cut(s) 119
MvaI CCWGG 3 cut(s) 204, 359, 1304
MwoI GCNNNNNNNGC 6 cut(s) 170, 368, 554, 618, 769, 1330
NciI CCSGG 8 cut(s) 56, 97, 265, 475, 854, 931, 1105, 1106
NdeII GATC 4 cut(s) 433, 496, 829, 1266
NlaIII CATG 5 cut(s) 149, 316, 322, 953, 1146
NmuCI GTSAC 3 cut(s) 91, 717, 874
NspI RCATGY 1 cut(s) 316
PagI TCATGA 1 cut(s) 318
PctI GAATGC 1 cut(s) 119
PdmI GAANNNNTTC 2 cut(s) 24, 596
PfeI GAWTC 3 cut(s) 406, 1050, 1130
PflMI CCANNNNNTGG 1 cut(s) 1143
PinAI ACCGGT 1 cut(s) 647
PkrI GCNGC 6 cut(s) 13, 52, 103, 465, 1039, 1294
PleI GAGTC 4 cut(s) 101, 977, 1012, 1103
PpsI GAGTC 4 cut(s) 101, 977, 1012, 1103
Ppu21I YACGTR 2 cut(s) 241, 874
PpuMI RGGWCCY 1 cut(s) 671
Psp5II RGGWCCY 1 cut(s) 671
Psp6I CCWGG 3 cut(s) 202, 357, 1302
PspEI GGTNACC 2 cut(s) 637, 1021
PspFI CCCAGC 3 cut(s) 548, 1076, 1295
PspGI CCWGG 3 cut(s) 202, 357, 1302
PspPI GGNCC 4 cut(s) 443, 571, 671, 701
PspPPI RGGWCCY 1 cut(s) 671
PsrI GAACNNNNNNTAC 2 cut(s) 12, 44
PvuII CAGCTG 3 cut(s) 104, 557, 1295
RsaI GTAC 6 cut(s) 201, 239, 422, 788, 872, 1301
RsaNI GTAC 6 cut(s) 200, 238, 421, 787, 871, 1300
RseI CAYNNNNRTG 1 cut(s) 317
SaqAI TTAA 3 cut(s) 365, 387, 1212
SatI GCNGC 6 cut(s) 12, 51, 102, 464, 1038, 1293
Sau3AI GATC 4 cut(s) 433, 496, 829, 1266
Sau96I GGNCC 4 cut(s) 443, 571, 671, 701
SchI GAGTC 4 cut(s) 101, 977, 1013, 1103
SduI GDGCHC 2 cut(s) 1105, 1220
SexAI ACCWGGT 1 cut(s) 202
SfaNI GCATC 3 cut(s) 70, 325, 1171
SfcI CTRYAG 1 cut(s) 63
SgrAI CRCCGGYG 1 cut(s) 647
SinI GGWCC 2 cut(s) 671, 701
SmaI CCCGGG 1 cut(s) 1106
SmiMI CAYNNNNRTG 1 cut(s) 317
SmlI CTYRAG 3 cut(s) 74, 215, 401
SmoI CTYRAG 3 cut(s) 74, 215, 401
SpeI ACTAGT 1 cut(s) 748
Sse9I AATT 7 cut(s) 24, 127, 186, 384, 392, 902, 1316
SsiI CCGC 8 cut(s) 48, 546, 610, 621, 979, 1037, 1040, 1324
SspMI CTAG 3 cut(s) 749, 885, 1384
StyI CCWWGG 3 cut(s) 32, 325, 1362
TaaI ACNGT 1 cut(s) 777
TaiI ACGT 5 cut(s) 243, 354, 483, 870, 876
TaqI TCGA 1 cut(s) 1233
TaqII GACCGA 1 cut(s) 893
TasI AATT 7 cut(s) 24, 127, 186, 384, 392, 902, 1316
TauI GCSGC 1 cut(s) 1040
TfiI GAWTC 3 cut(s) 406, 1050, 1130
Tru1I TTAA 3 cut(s) 365, 387, 1212
Tru9I TTAA 3 cut(s) 365, 387, 1212
TseFI GTSAC 3 cut(s) 91, 717, 874
TseI GCWGC 5 cut(s) 11, 50, 101, 463, 1292
Tsp45I GTSAC 3 cut(s) 91, 717, 874
TspDTI ATGAA 3 cut(s) 816, 938, 1323
TspGWI ACGGA 1 cut(s) 1102
TspMI CCCGGG 1 cut(s) 1104
Van91I CCANNNNNTGG 1 cut(s) 1143
VpaK11BI GGWCC 2 cut(s) 671, 701
XagI CCTNNNNNAGG 1 cut(s) 414
XapI RAATTY 4 cut(s) 127, 186, 392, 1316
XceI RCATGY 1 cut(s) 316
XmaI CCCGGG 1 cut(s) 1104
XmnI GAANNNNTTC 2 cut(s) 24, 596
XspI CTAG 3 cut(s) 749, 885, 1384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.