Rmu_sc0005469.1_g000016

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005469.1
OG0000087
Physical Location & Seq
Reverse (-)
53816 .. 56030
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005469.1_g000016.1.cds

Sequence Viewer

Length: 1836 bp
atggaatcagaagccaggggtggggatatgggatcgtcgtaccagtcttctgccaggaaagctgaagaggatatcgaccggtacttaggccgagtagatcaattagcagagaacacgggatcctcgactgaggtgttctcagagagtagtgaggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagtcacagtggccattcccgagggcataccgaagccgaggtatacacttgcggatgggaccggatggagagatggccatgaatcctgccccggggtgggtggcgctgcactagaatcagctccaccaagggttatcgctaccgctgcctcggtgcctacagtatctgctgcggatgctgaacctgtccccagggcaactgaccccgaatgccattcgccaaatatacagcatgatggctatgtgggacttgtgccaacaagggtggccttccataaacgaattccacgcgttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggaaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatctgaagtagaaaggaagaggatagcccgggtatatgctgtttggtcagagaaagagaggagctcttatagattcatccggcactctatactttataggctagggctagggtggctccctgtgaaagcgccgaagaggaaaccccggaaaggcaagggggaggacaggatggatgatgcccaattgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacaagtcggtcaattgaagaaacccttctggagatcaccgatgagggatatggtgaacctaaccctgacgctcccgtgacccacatcgtgcagccctccctggccgacgttatcacgatagatgacaccggaacgggaaaggaggtgacgtacactggctgggatgttcaaggttttggtgcgaagaggcagaagaaagatcacccgggaccagagtcgtcgccttcgcttggcttgttatctcccgtcattccggtaatccccaagaagcccatcaagcagctgttgagtgagtacggagttgccgatgaaaagttcgtgcggtccatgcttggtgacttgaaggatattgaccttgaccgggttcgggccaaggataatacgccccaggagaatcgccgtcttgccccggaatcaatgatgcgggcactcttcaatgtgtacgccattgactccagcgaggaagatactcatctgaatgaggaggttagcaatctctccgagcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggacttattgaaggctgagatggtcgccgctaagcagcggatcgcggagcttgagggtgaagtctctgaggcgcgggaagaggtaaaaaacgctcgggactccgagaaaaaagcagcagagtctgccgtgtcatggaaggagaaggcagaccacctggaggatcgccttctcgcggagaggcacgaggccgtggaggagtacaagtcctcggaagagctaatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaggagtgggtggtggccggatatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaggcggtggccaagtctggtgtcggtgggtcccagagtaccggtggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

611

Amino Acids

67.5

Weight (kDa)

5.49

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1375
Acc36I ACCTGC 1 cut(s) 1375
Acc65I GGTACC 1 cut(s) 590
AccB1I GGYRCC 2 cut(s) 352, 590
AccB7I CCANNNNNTGG 1 cut(s) 814
AccBSI CCGCTC 2 cut(s) 1429, 1828
AccI GTMKAC 2 cut(s) 242, 861
AccII CGCG 4 cut(s) 489, 1475, 1504, 1604
AclWI GGATC 6 cut(s) 40, 114, 127, 190, 1478, 1599
AcoI YGGCCR 5 cut(s) 210, 274, 981, 1713, 1785
AcsI RAATTY 3 cut(s) 480, 1694, 1736
AcuI CTGAAG 2 cut(s) 84, 651
AcyI GRCGYC 1 cut(s) 843
AdeI CACNNNGTG 1 cut(s) 967
AfaI GTAC 9 cut(s) 41, 83, 592, 880, 1031, 1175, 1322, 1631, 1816
AflIII ACRYGT 1 cut(s) 487
AgeI ACCGGT 3 cut(s) 78, 587, 1817
AgsI TTSAA 6 cut(s) 896, 1049, 1222, 1315, 1441, 1699
AhdI GACNNNNNGTC 1 cut(s) 868
AjnI CCWGG 8 cut(s) 14, 53, 389, 831, 978, 1266, 1584, 1752
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 1 cut(s) 692
Alw26I GTCTC 2 cut(s) 1498, 1754
AlwI GGATC 6 cut(s) 40, 114, 127, 190, 1478, 1599
AlwNI CAGNNNCTG 2 cut(s) 365, 1553
Ama87I CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
ApoI RAATTY 3 cut(s) 480, 1694, 1736
AsiGI ACCGGT 3 cut(s) 78, 587, 1817
Asp700I GAANNNNTTC 1 cut(s) 903
Asp718I GGTACC 1 cut(s) 590
AspA2I CCTAGG 1 cut(s) 865
AspLEI GCGC 3 cut(s) 305, 757, 1504
AspS9I GGNCC 8 cut(s) 193, 258, 610, 829, 1088, 1203, 1248, 1806
AsuHPI GGTGA 8 cut(s) 179, 907, 944, 1036, 1073, 1226, 1399, 1499
AvaI CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
AvaII GGWCC 5 cut(s) 258, 610, 1088, 1203, 1806
AvrII CCTAGG 1 cut(s) 865
BaeGI GKGCMC 1 cut(s) 1309
BalI TGGCCA 3 cut(s) 212, 276, 1787
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 2 cut(s) 352, 590
BanII GRGCYC 1 cut(s) 692
BauI CACGAG 1 cut(s) 1613
BbsI GAAGAC 2 cut(s) 39, 846
Bbv12I GWGCWC 1 cut(s) 692
BccI CCATC 9 cut(s) 248, 258, 266, 428, 790, 808, 820, 1160, 1444
BceAI ACGGC 3 cut(s) 1263, 1541, 1604
BciT130I CCWGG 8 cut(s) 16, 55, 391, 833, 980, 1268, 1586, 1754
BcoDI GTCTC 2 cut(s) 1498, 1754
BfaI CTAG 5 cut(s) 311, 542, 728, 734, 866
BfmI CTRYAG 1 cut(s) 357
BfoI RGCGCY 2 cut(s) 306, 758
BfuAI ACCTGC 1 cut(s) 1375
BlnI CCTAGG 1 cut(s) 865
BlpI GCTNAGC 1 cut(s) 1461
Bme18I GGWCC 5 cut(s) 258, 610, 1088, 1203, 1806
BmeRI GACNNNNNGTC 1 cut(s) 868
BmeT110I CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
BmgT120I GGNCC 8 cut(s) 193, 258, 610, 829, 1088, 1203, 1248, 1806
BmsI GCATC 3 cut(s) 364, 793, 1290
BoxI GACNNNNGTC 1 cut(s) 1093
BpiI GAAGAC 2 cut(s) 39, 846
BplI GAGNNNNNCTC 4 cut(s) 122, 154, 674, 706
BpmI CTGGAG 5 cut(s) 929, 1318, 1439, 1607, 1775
Bpu1102I GCTNAGC 1 cut(s) 1461
BpuEI CTTGAG 1 cut(s) 1502
Bsa29I ATCGAT 1 cut(s) 855
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 1 cut(s) 843
BsaI GGTCTC 1 cut(s) 1754
BsaWI WCCGGW 6 cut(s) 78, 260, 587, 1007, 1132, 1817
BsaXI ACNNNNNCTCC 4 cut(s) 1013, 1043, 1619, 1649
Bse118I RCCGGY 3 cut(s) 78, 587, 1817
Bse1I ACTGG 3 cut(s) 43, 613, 1039
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 8 cut(s) 16, 55, 391, 833, 980, 1268, 1586, 1754
BseCI ATCGAT 1 cut(s) 855
BseGI GGATG 7 cut(s) 259, 269, 379, 702, 801, 805, 1048
BseJI GATNNNNATC 1 cut(s) 1350
BseMII CTCAG 4 cut(s) 120, 153, 1437, 1488
BseNI ACTGG 3 cut(s) 43, 613, 1039
BseRI GAGGAG 4 cut(s) 167, 700, 1376, 1640
BseSI GKGCMC 1 cut(s) 1309
BseYI CCCAGC 2 cut(s) 545, 1038
BsgI GTGCAG 2 cut(s) 291, 989
Bsh1236I CGCG 4 cut(s) 489, 1475, 1504, 1604
Bsh1285I CGRYCG 1 cut(s) 79
BshNI GGYRCC 2 cut(s) 352, 590
BshTI ACCGGT 3 cut(s) 78, 587, 1817
BshVI ATCGAT 1 cut(s) 855
BsiEI CGRYCG 1 cut(s) 79
BsiHKAI GWGCWC 1 cut(s) 692
BsiHKCI CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
BslFI GGGAC 8 cut(s) 271, 371, 459, 623, 1101, 1445, 1541, 1792
BsmAI GTCTC 2 cut(s) 1498, 1754
BsmFI GGGAC 8 cut(s) 271, 371, 459, 623, 1101, 1445, 1541, 1792
BsmI GAATGC 1 cut(s) 413
Bso31I GGTCTC 1 cut(s) 1754
BsoBI CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
Bsp1286I GDGCHC 2 cut(s) 692, 1309
Bsp143I GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
Bsp1720I GCTNAGC 1 cut(s) 1461
BspCNI CTCAG 4 cut(s) 121, 152, 1438, 1489
BspDI ATCGAT 1 cut(s) 855
BspFNI CGCG 4 cut(s) 489, 1475, 1504, 1604
BspHI TCATGA 1 cut(s) 1689
BspMI ACCTGC 1 cut(s) 1375
BspPI GGATC 6 cut(s) 40, 114, 127, 190, 1478, 1599
BspQI GCTCTTC 1 cut(s) 1638
BspT107I GGYRCC 2 cut(s) 352, 590
BspTNI GGTCTC 1 cut(s) 1754
BsrBI CCGCTC 2 cut(s) 1429, 1828
BsrFI RCCGGY 3 cut(s) 78, 587, 1817
BsrI ACTGG 3 cut(s) 43, 613, 1039
BssAI RCCGGY 3 cut(s) 78, 587, 1817
BssMI GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
BssNAI GTATAC 1 cut(s) 243
BssNI GRCGYC 1 cut(s) 843
BssSI CACGAG 1 cut(s) 1613
BssT1I CCWWGG 3 cut(s) 326, 865, 1251
Bst1107I GTATAC 1 cut(s) 243
Bst2BI CACGAG 1 cut(s) 1613
Bst2UI CCWGG 8 cut(s) 16, 55, 391, 833, 980, 1268, 1586, 1754
Bst4CI ACNGT 2 cut(s) 208, 361
Bst6I CTCTTC 7 cut(s) 60, 638, 755, 1058, 1316, 1503, 1638
BstACI GRCGYC 1 cut(s) 843
BstAPI GCANNNNNTGC 1 cut(s) 1553
BstC8I GCNNGC 3 cut(s) 1305, 1662, 1826
BstDEI CTNAG 6 cut(s) 85, 129, 139, 1446, 1461, 1497
BstDSI CCRYGG 1 cut(s) 1620
BstF5I GGATG 7 cut(s) 259, 269, 379, 702, 801, 805, 1048
BstFNI CGCG 4 cut(s) 489, 1475, 1504, 1604
BstH2I RGCGCY 2 cut(s) 306, 758
BstHHI GCGC 3 cut(s) 305, 757, 1504
BstKTI GATC 9 cut(s) 35, 100, 122, 185, 915, 1081, 1473, 1594, 1774
BstMAI GTCTC 2 cut(s) 1498, 1754
BstMBI GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 8 cut(s) 59, 344, 374, 739, 1156, 1207, 1553, 1661
BstNI CCWGG 8 cut(s) 16, 55, 391, 833, 980, 1268, 1586, 1754
BstNSI RCATGY 1 cut(s) 502
BstPAI GACNNNNGTC 1 cut(s) 1093
BstSFI CTRYAG 1 cut(s) 357
BstSLI GKGCMC 1 cut(s) 1309
BstUI CGCG 4 cut(s) 489, 1475, 1504, 1604
BstV2I GAAGAC 2 cut(s) 39, 846
BstX2I RGATCY 2 cut(s) 119, 182
BstYI RGATCY 2 cut(s) 119, 182
BstZ17I GTATAC 1 cut(s) 243
Bsu15I ATCGAT 1 cut(s) 855
BsuTUI ATCGAT 1 cut(s) 855
BtgI CCRYGG 1 cut(s) 1620
BtsCI GGATG 7 cut(s) 259, 269, 379, 702, 801, 805, 1048
BtsIMutI CAGTG 2 cut(s) 213, 1032
BveI ACCTGC 1 cut(s) 1375
Cac8I GCNNGC 3 cut(s) 1305, 1662, 1826
CaiI CAGNNNCTG 2 cut(s) 365, 1553
CciI TCATGA 1 cut(s) 1689
CfoI GCGC 3 cut(s) 305, 757, 1504
Cfr10I RCCGGY 3 cut(s) 78, 587, 1817
Cfr13I GGNCC 8 cut(s) 193, 258, 610, 829, 1088, 1203, 1248, 1806
Cfr9I CCCGGG 3 cut(s) 290, 654, 1084
ClaI ATCGAT 1 cut(s) 855
CseI GACGC 2 cut(s) 851, 956
Csp6I GTAC 9 cut(s) 40, 82, 591, 879, 1030, 1174, 1321, 1630, 1815
CspAI ACCGGT 3 cut(s) 78, 587, 1817
CspCI CAANNNNNGTGG 2 cut(s) 444, 479
CviAII CATG 7 cut(s) 278, 431, 499, 1207, 1400, 1563, 1690
CviQI GTAC 9 cut(s) 40, 82, 591, 879, 1030, 1174, 1321, 1630, 1815
DdeI CTNAG 6 cut(s) 85, 129, 139, 1446, 1461, 1497
DpnI GATC 9 cut(s) 34, 99, 121, 184, 914, 1080, 1472, 1593, 1773
DpnII GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
DraIII CACNNNGTG 1 cut(s) 967
DriI GACNNNNNGTC 1 cut(s) 868
EaeI YGGCCR 5 cut(s) 210, 274, 981, 1713, 1785
Eam1104I CTCTTC 7 cut(s) 60, 638, 755, 1058, 1316, 1503, 1638
Eam1105I GACNNNNNGTC 1 cut(s) 868
EarI CTCTTC 7 cut(s) 60, 638, 755, 1058, 1316, 1503, 1638
Ecl136II GAGCTC 1 cut(s) 690
Eco130I CCWWGG 3 cut(s) 326, 865, 1251
Eco24I GRGCYC 1 cut(s) 692
Eco31I GGTCTC 1 cut(s) 1754
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 5 cut(s) 258, 610, 1088, 1203, 1806
Eco53kI GAGCTC 1 cut(s) 690
Eco57I CTGAAG 2 cut(s) 84, 651
Eco88I CYCGRG 5 cut(s) 218, 290, 654, 1084, 1524
EcoICRI GAGCTC 1 cut(s) 690
EcoO109I RGGNCCY 2 cut(s) 193, 1806
EcoRI GAATTC 1 cut(s) 480
EcoRII CCWGG 8 cut(s) 14, 53, 389, 831, 978, 1266, 1584, 1752
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 3 cut(s) 326, 865, 1251
EcoT38I GRGCYC 1 cut(s) 692
ErhI CCWWGG 3 cut(s) 326, 865, 1251
FaeI CATG 7 cut(s) 281, 434, 502, 1210, 1403, 1566, 1693
FalI AAGNNNNNCTT 4 cut(s) 831, 863, 888, 920
FaqI GGGAC 8 cut(s) 271, 371, 459, 623, 1101, 1445, 1541, 1792
FatI CATG 7 cut(s) 277, 430, 498, 1206, 1399, 1562, 1689
FauI CCCGC 4 cut(s) 1296, 1422, 1497, 1737
FblI GTMKAC 2 cut(s) 242, 861
FokI GGATG 7 cut(s) 266, 276, 386, 689, 808, 812, 1055
FriOI GRGCYC 1 cut(s) 692
FspBI CTAG 5 cut(s) 311, 542, 728, 734, 866
GlaI GCGC 3 cut(s) 304, 756, 1503
GsaI CCCAGC 2 cut(s) 549, 1042
GsuI CTGGAG 5 cut(s) 929, 1318, 1439, 1607, 1775
HaeII RGCGCY 2 cut(s) 306, 758
HgaI GACGC 2 cut(s) 851, 956
HhaI GCGC 3 cut(s) 305, 757, 1504
Hin1I GRCGYC 1 cut(s) 843
Hin1II CATG 7 cut(s) 281, 434, 502, 1210, 1403, 1566, 1693
Hin6I GCGC 3 cut(s) 303, 755, 1502
HinP1I GCGC 3 cut(s) 303, 755, 1502
HincII GTYRAC 1 cut(s) 862
HindII GTYRAC 1 cut(s) 862
HphI GGTGA 8 cut(s) 179, 907, 944, 1036, 1073, 1226, 1399, 1499
Hpy166II GTNNAC 5 cut(s) 243, 862, 935, 1032, 1321
Hpy188III TCNNGA 6 cut(s) 218, 908, 994, 1526, 1690, 1775
Hpy8I GTNNAC 5 cut(s) 243, 862, 935, 1032, 1321
Hpy99I CGWCG 4 cut(s) 40, 164, 989, 1102
HpyCH4III ACNGT 2 cut(s) 208, 361
HpyCH4IV ACGT 2 cut(s) 987, 1028
HpyCH4V TGCA 2 cut(s) 308, 970
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 344, 374, 739, 1156, 1207, 1553, 1661
HpyF3I CTNAG 6 cut(s) 85, 129, 139, 1446, 1461, 1497
HpySE526I ACGT 2 cut(s) 987, 1028
Hsp92I GRCGYC 1 cut(s) 843
Hsp92II CATG 7 cut(s) 281, 434, 502, 1210, 1403, 1566, 1693
HspAI GCGC 3 cut(s) 303, 755, 1502
KflI GGGWCCC 1 cut(s) 1806
KpnI GGTACC 1 cut(s) 594
Kzo9I GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
LguI GCTCTTC 1 cut(s) 1638
LmnI GCTCC 6 cut(s) 325, 687, 747, 955, 1426, 1477
LweI GCATC 3 cut(s) 364, 793, 1290
MaeI CTAG 5 cut(s) 311, 542, 728, 734, 866
MaeII ACGT 2 cut(s) 987, 1028
MaeIII GTNAC 5 cut(s) 202, 490, 955, 1024, 1214
MalI GATC 9 cut(s) 34, 99, 121, 184, 914, 1080, 1472, 1593, 1773
MbiI CCGCTC 2 cut(s) 1429, 1828
MboI GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
MfeI CAATTG 2 cut(s) 809, 891
MflI RGATCY 2 cut(s) 119, 182
MhlI GDGCHC 2 cut(s) 692, 1309
MlsI TGGCCA 3 cut(s) 212, 276, 1787
MluCI AATT 7 cut(s) 101, 480, 561, 809, 891, 1694, 1736
MluI ACGCGT 1 cut(s) 487
MluNI TGGCCA 3 cut(s) 212, 276, 1787
MlyI GAGTC 5 cut(s) 164, 1103, 1325, 1523, 1559
MmeI TCCRAC 1 cut(s) 183
Mox20I TGGCCA 3 cut(s) 212, 276, 1787
MroXI GAANNNNTTC 1 cut(s) 903
MscI TGGCCA 3 cut(s) 212, 276, 1787
MseI TTAA 1 cut(s) 564
MslI CAYNNNNRTG 2 cut(s) 855, 1356
Msp20I TGGCCA 3 cut(s) 212, 276, 1787
MspA1I CMGCKG 4 cut(s) 344, 583, 1162, 1468
MunI CAATTG 2 cut(s) 809, 891
Mva1269I GAATGC 1 cut(s) 413
MvaI CCWGG 8 cut(s) 16, 55, 391, 833, 980, 1268, 1586, 1754
MvnI CGCG 4 cut(s) 489, 1475, 1504, 1604
MwoI GCNNNNNNNGC 8 cut(s) 59, 344, 374, 739, 1156, 1207, 1553, 1661
NdeII GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
NlaIII CATG 7 cut(s) 281, 434, 502, 1210, 1403, 1566, 1693
NmeAIII GCCGAG 2 cut(s) 116, 261
NmuCI GTSAC 4 cut(s) 202, 955, 1024, 1214
NspI RCATGY 1 cut(s) 502
PagI TCATGA 1 cut(s) 1689
PaqCI CACCTGC 1 cut(s) 1375
PasI CCCWGGG 1 cut(s) 390
PciSI GCTCTTC 1 cut(s) 1638
PcsI WCGNNNNNNNCGW 2 cut(s) 122, 1182
PctI GAATGC 1 cut(s) 413
PdmI GAANNNNTTC 1 cut(s) 903
PfeI GAWTC 6 cut(s) 5, 281, 314, 699, 1273, 1292
PflMI CCANNNNNTGG 1 cut(s) 814
PfoI TCCNGGA 1 cut(s) 1752
PinAI ACCGGT 3 cut(s) 78, 587, 1817
PleI GAGTC 5 cut(s) 163, 1102, 1325, 1523, 1558
PpsI GAGTC 5 cut(s) 163, 1102, 1325, 1523, 1558
PpuMI RGGWCCY 1 cut(s) 1806
PshAI GACNNNNGTC 1 cut(s) 1093
Psp124BI GAGCTC 1 cut(s) 692
Psp5II RGGWCCY 1 cut(s) 1806
Psp6I CCWGG 8 cut(s) 14, 53, 389, 831, 978, 1266, 1584, 1752
PspFI CCCAGC 2 cut(s) 545, 1038
PspGI CCWGG 8 cut(s) 14, 53, 389, 831, 978, 1266, 1584, 1752
PspPI GGNCC 8 cut(s) 193, 258, 610, 829, 1088, 1203, 1248, 1806
PspPPI RGGWCCY 1 cut(s) 1806
PstNI CAGNNNCTG 2 cut(s) 365, 1553
PsuI RGATCY 2 cut(s) 119, 182
PvuII CAGCTG 2 cut(s) 583, 1162
RsaI GTAC 9 cut(s) 41, 83, 592, 880, 1031, 1175, 1322, 1631, 1816
RsaNI GTAC 9 cut(s) 40, 82, 591, 879, 1030, 1174, 1321, 1630, 1815
RseI CAYNNNNRTG 2 cut(s) 855, 1356
SacI GAGCTC 1 cut(s) 692
SalI GTCGAC 1 cut(s) 860
SapI GCTCTTC 1 cut(s) 1638
SaqAI TTAA 1 cut(s) 564
Sau3AI GATC 9 cut(s) 32, 97, 119, 182, 912, 1078, 1470, 1591, 1771
Sau96I GGNCC 8 cut(s) 193, 258, 610, 829, 1088, 1203, 1248, 1806
SchI GAGTC 5 cut(s) 164, 1103, 1325, 1523, 1559
SduI GDGCHC 2 cut(s) 692, 1309
SfaNI GCATC 3 cut(s) 364, 793, 1290
SfcI CTRYAG 1 cut(s) 357
SinI GGWCC 5 cut(s) 258, 610, 1088, 1203, 1806
SmaI CCCGGG 3 cut(s) 292, 656, 1086
SmiMI CAYNNNNRTG 2 cut(s) 855, 1356
SmlI CTYRAG 1 cut(s) 1481
SmoI CTYRAG 1 cut(s) 1481
Sse9I AATT 7 cut(s) 101, 480, 561, 809, 891, 1694, 1736
SspMI CTAG 5 cut(s) 311, 542, 728, 734, 866
SstI GAGCTC 1 cut(s) 692
StyI CCWWGG 3 cut(s) 326, 865, 1251
TaaI ACNGT 2 cut(s) 208, 361
TaiI ACGT 2 cut(s) 990, 1031
TaqI TCGA 6 cut(s) 75, 125, 509, 855, 861, 872
TaqII GACCGA 1 cut(s) 876
TasI AATT 7 cut(s) 101, 480, 561, 809, 891, 1694, 1736
TatI WGTACW 1 cut(s) 1629
TauI GCSGC 1 cut(s) 1460
TfiI GAWTC 6 cut(s) 5, 281, 314, 699, 1273, 1292
Tru1I TTAA 1 cut(s) 564
Tru9I TTAA 1 cut(s) 564
TscAI CASTG 2 cut(s) 213, 1039
TseFI GTSAC 4 cut(s) 202, 955, 1024, 1214
Tsp45I GTSAC 4 cut(s) 202, 955, 1024, 1214
TspDTI ATGAA 6 cut(s) 294, 691, 1203, 1388, 1706, 1743
TspGWI ACGGA 1 cut(s) 1191
TspMI CCCGGG 3 cut(s) 290, 654, 1084
TspRI CASTG 2 cut(s) 213, 1039
Van91I CCANNNNNTGG 1 cut(s) 814
VpaK11BI GGWCC 5 cut(s) 258, 610, 1088, 1203, 1806
XapI RAATTY 3 cut(s) 480, 1694, 1736
XceI RCATGY 1 cut(s) 502
XcmI CCANNNNNNNNNTGG 1 cut(s) 1817
XmaI CCCGGG 3 cut(s) 290, 654, 1084
XmaJI CCTAGG 1 cut(s) 865
XmiI GTMKAC 2 cut(s) 242, 861
XmnI GAANNNNTTC 1 cut(s) 903
XspI CTAG 5 cut(s) 311, 542, 728, 734, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.