Rmu_sc0009978.1_g000010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009978.1
OG0000087
Physical Location & Seq
Forward (+)
29510 .. 31396
1887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009978.1_g000010.1.cds

Sequence Viewer

Length: 1509 bp
atgggtagcgctacactagaatcagctgcatcaggggctatcgttaccgttgccgaagccagcggtgtatcaagtggcttactcgaagaagtatggagggaccgttaccttaatgcacgggactatgagccgctcgttaccgatctacctacctcacaaactaagaagtggaagaacaaagtatttctcgccgggggtaggtggcagatcaaaaataagaaatggcaggttacgggaacctttcaagccattgaggatcaaacatacgtgctatcggaggtagagaggaagcgcattgccagggtgtacgctgtttgggctaacaccgaggggaggagttcttatagatttttccggtaccgcatacttgacagactaggtttaggaagagtacccgtgaaggtgccaaataggaggccaagaaaaggaaaagaagatgacaaaatggatgctctggcattgatggacaagctgctcaatcaaggagatgaagcattacggatcgacgtggatctggagaataagaccaccaggactgcgattgaggatgtcattttggagataccagatgcaggggtatggggaactggaccccaataccccaatttggatccgggaaggggcaagggaaagggaaccgggtcccaggcttccctctccagcgggtctcttggtagcgagggcgtgcttctgcctggcgagaagaggaaaagggttcatcgccaccgtcaccgtagtggggcgaatgtggaggtgacgtatactgggctggatgtaaaggaggactcgaagaagtccaagaaaagtcatcaggcccttccggagtcgaccaagtcactggggctgctgtctccggtgctgccggttgttcccaagaaaccgatcaagcagctgctctccgagtacggtgtggcagatgaaaaatttgtgaggtcaatgcttggggacctcaaagacatcgacctggaccgcatccgggctaaggataacactccccacgagaataggaggctggcgagggagtcgatgattcgggcgctatacaacgtctatgccatcgatgctagtgaggaggatacccacctgaaggaggaagtaagcagcctctccgggcaagtgaagtaccttcatggggagaaggctaagctggagaaggaacgggattctctacatgggaaggtggagtccttaactcccaaggtggctgaactggaggaggcagggaaaaggatctcggccctggaaagcgaccttaccgaggcacaggctgagatagaaagtacccgggactctctgaaagaagctgaagaatcggccaggcaagaggcagttgccgggtacaaaggctcccaagagcttttggatatgctgctcgctgctcaagacaaagccgtgatcaccaagtacaaggagtgggtggcagccgggtacttggatgaggctaagttcaagtggggtgcccttgagaggaggaagaaccaggaagctgcagctggaacgtggatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

502

Amino Acids

55.99

Weight (kDa)

8.85

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 217
Acc65I GGTACC 1 cut(s) 357
AccB1I GGYRCC 3 cut(s) 357, 403, 1457
AccBSI CCGCTC 1 cut(s) 133
AccI GTMKAC 2 cut(s) 761, 827
AccIII TCCGGA 1 cut(s) 820
AciI CCGC 5 cut(s) 63, 131, 361, 663, 970
AclWI GGATC 6 cut(s) 264, 509, 519, 605, 618, 1238
AcoI YGGCCR 1 cut(s) 1314
AcsI RAATTY 1 cut(s) 923
AcuI CTGAAG 2 cut(s) 1106, 1326
AfaI GTAC 9 cut(s) 308, 359, 393, 905, 1124, 1282, 1340, 1406, 1430
AfeI AGCGCT 1 cut(s) 10
AgsI TTSAA 2 cut(s) 245, 1450
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 8 cut(s) 299, 530, 645, 694, 963, 1239, 1316, 1479
AleI CACNNNNGTG 1 cut(s) 735
AluBI AGCT 8 cut(s) 26, 472, 892, 1147, 1304, 1357, 1487, 1493
AluI AGCT 8 cut(s) 26, 472, 892, 1147, 1304, 1357, 1487, 1493
Alw26I GTCTC 2 cut(s) 672, 855
AlwI GGATC 6 cut(s) 264, 509, 519, 605, 618, 1238
Ama87I CYCGRG 1 cut(s) 1284
Aor13HI TCCGGA 1 cut(s) 820
Aor51HI AGCGCT 1 cut(s) 10
AoxI GGCC 4 cut(s) 416, 813, 1236, 1314
ApoI RAATTY 1 cut(s) 923
Asp718I GGTACC 1 cut(s) 357
AspLEI GCGC 3 cut(s) 11, 294, 1039
AspS9I GGNCC 7 cut(s) 100, 590, 642, 814, 946, 967, 1237
AsuC2I CCSGG 9 cut(s) 193, 615, 640, 977, 1111, 1285, 1286, 1336, 1426
AsuHPI GGTGA 3 cut(s) 722, 766, 1390
AvaI CYCGRG 1 cut(s) 1284
AvaII GGWCC 5 cut(s) 100, 590, 642, 946, 967
BaeGI GKGCMC 1 cut(s) 1462
BamHI GGATCC 1 cut(s) 610
BanI GGYRCC 3 cut(s) 357, 403, 1457
BauI CACGAG 1 cut(s) 998
BccI CCATC 2 cut(s) 457, 1064
BceAI ACGGC 1 cut(s) 1376
BciT130I CCWGG 8 cut(s) 301, 532, 647, 696, 965, 1241, 1318, 1481
BciVI GTATCC 1 cut(s) 1069
BclI TGATCA 1 cut(s) 1395
BcnI CCSGG 9 cut(s) 193, 615, 640, 977, 1111, 1285, 1286, 1336, 1426
BcoDI GTCTC 2 cut(s) 672, 855
BfaI CTAG 3 cut(s) 17, 377, 1065
BfmI CTRYAG 1 cut(s) 1488
BfoI RGCGCY 2 cut(s) 12, 1040
BfuAI ACCTGC 1 cut(s) 217
BfuI GTATCC 1 cut(s) 1069
BlpI GCTNAGC 1 cut(s) 1143
Bme18I GGWCC 5 cut(s) 100, 590, 642, 946, 967
BmeT110I CYCGRG 1 cut(s) 1284
BmgBI CACGTC 1 cut(s) 508
BmgT120I GGNCC 7 cut(s) 100, 590, 642, 814, 946, 967, 1237
BmrI ACTGGG 2 cut(s) 774, 848
BmsI GCATC 5 cut(s) 38, 439, 559, 981, 1051
BmuI ACTGGG 2 cut(s) 774, 848
BpmI CTGGAG 4 cut(s) 536, 643, 1169, 1232
Bpu10I CCTNAGC 1 cut(s) 981
Bpu1102I GCTNAGC 1 cut(s) 1143
BpuEI CTTGAG 2 cut(s) 1365, 1484
BpuMI CCSGG 9 cut(s) 193, 615, 640, 977, 1111, 1285, 1286, 1336, 1426
Bsa29I ATCGAT 1 cut(s) 1059
BsaAI YACGTR 1 cut(s) 268
BsaI GGTCTC 1 cut(s) 672
BsaJI CCNNGG 8 cut(s) 192, 300, 327, 645, 1197, 1239, 1257, 1284
BsaWI WCCGGW 3 cut(s) 354, 820, 853
BsaXI ACNNNNNCTCC 6 cut(s) 88, 118, 743, 773, 1331, 1361
Bse118I RCCGGY 1 cut(s) 862
Bse1I ACTGG 4 cut(s) 592, 769, 843, 1215
Bse3DI GCAATG 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 820
BseBI CCWGG 8 cut(s) 301, 532, 647, 696, 965, 1241, 1318, 1481
BseCI ATCGAT 1 cut(s) 1059
BseDI CCNNGG 8 cut(s) 192, 300, 327, 645, 1197, 1239, 1257, 1284
BseGI GGATG 6 cut(s) 454, 553, 778, 972, 1441, 1509
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 1 cut(s) 1260
BseNI ACTGG 4 cut(s) 592, 769, 843, 1215
BseRI GAGGAG 4 cut(s) 349, 1085, 1229, 1483
BseSI GKGCMC 1 cut(s) 1462
BshFI GGCC 4 cut(s) 418, 815, 1238, 1316
BshNI GGYRCC 3 cut(s) 357, 403, 1457
BshVI ATCGAT 1 cut(s) 1059
BsiHKCI CYCGRG 1 cut(s) 1284
BslFI GGGAC 5 cut(s) 113, 134, 628, 959, 1301
BsmAI GTCTC 2 cut(s) 672, 855
BsmFI GGGAC 5 cut(s) 113, 134, 628, 959, 1301
BsnI GGCC 4 cut(s) 418, 815, 1238, 1316
Bso31I GGTCTC 1 cut(s) 672
BsoBI CYCGRG 1 cut(s) 1284
Bsp1286I GDGCHC 1 cut(s) 1462
Bsp13I TCCGGA 1 cut(s) 820
Bsp143I GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
Bsp1720I GCTNAGC 1 cut(s) 1143
BspACI CCGC 5 cut(s) 63, 131, 361, 663, 970
BspANI GGCC 4 cut(s) 418, 815, 1238, 1316
BspCNI CTCAG 1 cut(s) 1261
BspDI ATCGAT 1 cut(s) 1059
BspEI TCCGGA 1 cut(s) 820
BspMAI CTGCAG 1 cut(s) 1492
BspMI ACCTGC 1 cut(s) 217
BspPI GGATC 6 cut(s) 264, 509, 519, 605, 618, 1238
BspT107I GGYRCC 3 cut(s) 357, 403, 1457
BspTNI GGTCTC 1 cut(s) 672
BsrBI CCGCTC 1 cut(s) 133
BsrDI GCAATG 1 cut(s) 294
BsrFI RCCGGY 1 cut(s) 862
BsrI ACTGG 4 cut(s) 592, 769, 843, 1215
BssAI RCCGGY 1 cut(s) 862
BssECI CCNNGG 8 cut(s) 192, 300, 327, 645, 1197, 1239, 1257, 1284
BssMI GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
BssNAI GTATAC 1 cut(s) 762
BssSI CACGAG 1 cut(s) 998
BssT1I CCWWGG 1 cut(s) 1197
Bst1107I GTATAC 1 cut(s) 762
Bst2BI CACGAG 1 cut(s) 998
Bst2UI CCWGG 8 cut(s) 301, 532, 647, 696, 965, 1241, 1318, 1481
Bst4CI ACNGT 5 cut(s) 49, 104, 728, 734, 908
Bst6I CTCTTC 2 cut(s) 382, 698
BstBAI YACGTR 1 cut(s) 268
BstC8I GCNNGC 4 cut(s) 61, 686, 1014, 1374
BstDEI CTNAG 5 cut(s) 162, 981, 1143, 1269, 1443
BstENI CCTNNNNNAGG 2 cut(s) 1088, 1256
BstF5I GGATG 6 cut(s) 454, 553, 778, 972, 1441, 1509
BstH2I RGCGCY 2 cut(s) 12, 1040
BstHHI GCGC 3 cut(s) 11, 294, 1039
BstKTI GATC 9 cut(s) 145, 210, 259, 504, 514, 613, 885, 1233, 1398
BstMAI GTCTC 2 cut(s) 672, 855
BstMBI GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
BstMWI GCNNNNNNNGC 3 cut(s) 35, 317, 1061
BstNI CCWGG 8 cut(s) 301, 532, 647, 696, 965, 1241, 1318, 1481
BstSFI CTRYAG 1 cut(s) 1488
BstSLI GKGCMC 1 cut(s) 1462
BstX2I RGATCY 3 cut(s) 511, 610, 1230
BstXI CCANNNNNNTGG 1 cut(s) 838
BstYI RGATCY 3 cut(s) 511, 610, 1230
BstZ17I GTATAC 1 cut(s) 762
Bsu15I ATCGAT 1 cut(s) 1059
BsuI GTATCC 1 cut(s) 1069
BsuRI GGCC 4 cut(s) 418, 815, 1238, 1316
BsuTUI ATCGAT 1 cut(s) 1059
BtgZI GCGATG 1 cut(s) 704
BtrI CACGTC 1 cut(s) 508
BtsCI GGATG 6 cut(s) 454, 553, 778, 972, 1441, 1509
BtsIMutI CAGTG 1 cut(s) 836
BveI ACCTGC 1 cut(s) 217
Cac8I GCNNGC 4 cut(s) 61, 686, 1014, 1374
CfoI GCGC 3 cut(s) 11, 294, 1039
Cfr10I RCCGGY 1 cut(s) 862
Cfr13I GGNCC 7 cut(s) 100, 590, 642, 814, 946, 967, 1237
Cfr9I CCCGGG 1 cut(s) 1284
ClaI ATCGAT 1 cut(s) 1059
Csp6I GTAC 9 cut(s) 307, 358, 392, 904, 1123, 1281, 1339, 1405, 1429
CviAII CATG 2 cut(s) 1130, 1172
CviQI GTAC 9 cut(s) 307, 358, 392, 904, 1123, 1281, 1339, 1405, 1429
DdeI CTNAG 5 cut(s) 162, 981, 1143, 1269, 1443
DpnI GATC 9 cut(s) 144, 209, 258, 503, 513, 612, 884, 1232, 1397
DpnII GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
EaeI YGGCCR 1 cut(s) 1314
Eam1104I CTCTTC 2 cut(s) 382, 698
EarI CTCTTC 2 cut(s) 382, 698
Eco130I CCWWGG 1 cut(s) 1197
Eco31I GGTCTC 1 cut(s) 672
Eco47I GGWCC 5 cut(s) 100, 590, 642, 946, 967
Eco47III AGCGCT 1 cut(s) 10
Eco57I CTGAAG 2 cut(s) 1106, 1326
Eco88I CYCGRG 1 cut(s) 1284
EcoNI CCTNNNNNAGG 2 cut(s) 1088, 1256
EcoO109I RGGNCCY 3 cut(s) 642, 814, 946
EcoRII CCWGG 8 cut(s) 299, 530, 645, 694, 963, 1239, 1316, 1479
EcoT14I CCWWGG 1 cut(s) 1197
ErhI CCWWGG 1 cut(s) 1197
FaeI CATG 2 cut(s) 1133, 1175
FaqI GGGAC 5 cut(s) 113, 134, 628, 959, 1301
FatI CATG 2 cut(s) 1129, 1171
FauI CCCGC 1 cut(s) 656
FbaI TGATCA 1 cut(s) 1395
FblI GTMKAC 2 cut(s) 761, 827
FokI GGATG 5 cut(s) 461, 560, 785, 959, 1448
FspBI CTAG 3 cut(s) 17, 377, 1065
GlaI GCGC 3 cut(s) 10, 293, 1038
GsuI CTGGAG 4 cut(s) 536, 643, 1169, 1232
HaeII RGCGCY 2 cut(s) 12, 1040
HaeIII GGCC 4 cut(s) 418, 815, 1238, 1316
HhaI GCGC 3 cut(s) 11, 294, 1039
Hin1II CATG 2 cut(s) 1133, 1175
Hin6I GCGC 3 cut(s) 9, 292, 1037
HinP1I GCGC 3 cut(s) 9, 292, 1037
HincII GTYRAC 1 cut(s) 828
HindII GTYRAC 1 cut(s) 828
HinfI GANTC 9 cut(s) 20, 785, 824, 1022, 1030, 1163, 1184, 1289, 1310
HphI GGTGA 3 cut(s) 722, 766, 1390
Hpy166II GTNNAC 3 cut(s) 307, 762, 828
Hpy188I TCNGA 3 cut(s) 277, 901, 1296
Hpy188III TCNNGA 3 cut(s) 515, 821, 1382
Hpy8I GTNNAC 3 cut(s) 307, 762, 828
Hpy99I CGWCG 1 cut(s) 509
HpyAV CCTTC 8 cut(s) 394, 612, 827, 1081, 1132, 1136, 1147, 1171
HpyCH4III ACNGT 5 cut(s) 49, 104, 728, 734, 908
HpyCH4IV ACGT 5 cut(s) 267, 507, 758, 1047, 1499
HpyCH4V TGCA 4 cut(s) 29, 116, 572, 1490
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 317, 1061
HpyF3I CTNAG 5 cut(s) 162, 981, 1143, 1269, 1443
HpySE526I ACGT 5 cut(s) 267, 507, 758, 1047, 1499
Hsp92II CATG 2 cut(s) 1133, 1175
HspAI GCGC 3 cut(s) 9, 292, 1037
KflI GGGWCCC 1 cut(s) 642
Kpn2I TCCGGA 1 cut(s) 820
KpnI GGTACC 1 cut(s) 361
Ksp22I TGATCA 1 cut(s) 1395
Kzo9I GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
LmnI GCTCC 1 cut(s) 1352
LweI GCATC 5 cut(s) 38, 439, 559, 981, 1051
MaeI CTAG 3 cut(s) 17, 377, 1065
MaeII ACGT 5 cut(s) 267, 507, 758, 1047, 1499
MaeIII GTNAC 7 cut(s) 43, 104, 136, 229, 728, 754, 834
MalI GATC 9 cut(s) 144, 209, 258, 503, 513, 612, 884, 1232, 1397
MbiI CCGCTC 1 cut(s) 133
MboI GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
MboII GAAGA 8 cut(s) 98, 184, 399, 446, 715, 802, 1319, 1486
MflI RGATCY 3 cut(s) 511, 610, 1230
MhlI GDGCHC 1 cut(s) 1462
MluCI AATT 2 cut(s) 604, 923
MlyI GAGTC 5 cut(s) 779, 833, 1031, 1193, 1283
MroI TCCGGA 1 cut(s) 820
MseI TTAA 2 cut(s) 111, 1190
MslI CAYNNNNRTG 1 cut(s) 735
MspA1I CMGCKG 5 cut(s) 26, 63, 663, 892, 1493
MvaI CCWGG 8 cut(s) 301, 532, 647, 696, 965, 1241, 1318, 1481
MwoI GCNNNNNNNGC 3 cut(s) 35, 317, 1061
NciI CCSGG 9 cut(s) 193, 615, 640, 977, 1111, 1285, 1286, 1336, 1426
NdeII GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
NlaIII CATG 2 cut(s) 1133, 1175
NmeAIII GCCGAG 1 cut(s) 1214
NmuCI GTSAC 3 cut(s) 728, 754, 834
OliI CACNNNNGTG 1 cut(s) 735
PfeI GAWTC 4 cut(s) 20, 1030, 1163, 1310
PflFI GACNNNGTC 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 613
PleI GAGTC 5 cut(s) 779, 832, 1030, 1192, 1283
PpsI GAGTC 5 cut(s) 779, 832, 1030, 1192, 1283
Ppu21I YACGTR 1 cut(s) 268
PpuMI RGGWCCY 2 cut(s) 642, 946
Psp5II RGGWCCY 2 cut(s) 642, 946
Psp6I CCWGG 8 cut(s) 299, 530, 645, 694, 963, 1239, 1316, 1479
PspGI CCWGG 8 cut(s) 299, 530, 645, 694, 963, 1239, 1316, 1479
PspPI GGNCC 7 cut(s) 100, 590, 642, 814, 946, 967, 1237
PspPPI RGGWCCY 2 cut(s) 642, 946
PstI CTGCAG 1 cut(s) 1492
PsuI RGATCY 3 cut(s) 511, 610, 1230
PsyI GACNNNGTC 1 cut(s) 832
PvuII CAGCTG 3 cut(s) 26, 892, 1493
RsaI GTAC 9 cut(s) 308, 359, 393, 905, 1124, 1282, 1340, 1406, 1430
RsaNI GTAC 9 cut(s) 307, 358, 392, 904, 1123, 1281, 1339, 1405, 1429
RseI CAYNNNNRTG 1 cut(s) 735
SalI GTCGAC 1 cut(s) 826
SaqAI TTAA 2 cut(s) 111, 1190
Sau3AI GATC 9 cut(s) 142, 207, 256, 501, 511, 610, 882, 1230, 1395
Sau96I GGNCC 7 cut(s) 100, 590, 642, 814, 946, 967, 1237
SchI GAGTC 5 cut(s) 779, 833, 1031, 1193, 1283
SduI GDGCHC 1 cut(s) 1462
SfaNI GCATC 5 cut(s) 38, 439, 559, 981, 1051
SfcI CTRYAG 1 cut(s) 1488
SinI GGWCC 5 cut(s) 100, 590, 642, 946, 967
SmaI CCCGGG 1 cut(s) 1286
SmiMI CAYNNNNRTG 1 cut(s) 735
SmlI CTYRAG 2 cut(s) 1380, 1463
SmoI CTYRAG 2 cut(s) 1380, 1463
Sse9I AATT 2 cut(s) 604, 923
SsiI CCGC 5 cut(s) 63, 131, 361, 663, 970
SspMI CTAG 3 cut(s) 17, 377, 1065
StyI CCWWGG 1 cut(s) 1197
TaaI ACNGT 5 cut(s) 49, 104, 728, 734, 908
TaiI ACGT 5 cut(s) 270, 510, 761, 1050, 1502
TaqI TCGA 7 cut(s) 84, 504, 788, 827, 960, 1025, 1059
TasI AATT 2 cut(s) 604, 923
TatI WGTACW 1 cut(s) 1404
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 4 cut(s) 20, 1030, 1163, 1310
Tru1I TTAA 2 cut(s) 111, 1190
Tru9I TTAA 2 cut(s) 111, 1190
TscAI CASTG 1 cut(s) 843
TseFI GTSAC 3 cut(s) 728, 754, 834
Tsp45I GTSAC 3 cut(s) 728, 754, 834
TspDTI ATGAA 4 cut(s) 504, 707, 933, 1118
TspGWI ACGGA 1 cut(s) 514
TspMI CCCGGG 1 cut(s) 1284
TspRI CASTG 1 cut(s) 843
Tth111I GACNNNGTC 1 cut(s) 832
VpaK11BI GGWCC 5 cut(s) 100, 590, 642, 946, 967
XagI CCTNNNNNAGG 2 cut(s) 1088, 1256
XapI RAATTY 1 cut(s) 923
XmaI CCCGGG 1 cut(s) 1284
XmiI GTMKAC 2 cut(s) 761, 827
XspI CTAG 3 cut(s) 17, 377, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.