Rmu_sc0003328.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003328.1
OG0000087
Physical Location & Seq
Reverse (-)
6444 .. 8802
2359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003328.1_g000003.1.cds

Sequence Viewer

Length: 1971 bp
atgaatttctgggtttgggataggctaaccctcgtgcttctggttccagatatagcaagatttgaggttcccggtaccgtaattaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagactgagggtggatctgcgaaggctccggtagtcacagtggccattcccgagggcattcctaagccgaggtacatgcttgcggacgggaccctgaccccgaatgccgttcgccaaatatatagtatgatggctatgtgggacctgtgccagcaagggtggctttccataaatgagttccgcgcggtacaccgggtattgtactcaaggaagcagtcttgtgcgggtacggtgaccttttccgctagggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgatcggtacctttcaagctatcggggaccagtcctatacgctatccgaagaggaaaagaagaggatagcccgggtatatgccgtgcggtcggagaaagagaggagctcttatagattcatccggcactctatactctttaggctaggattagggtggctccccgtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgacgctcaactgatggacatgctgatgagccagggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtccattgaagagacccttttggagataaccgatgagggatacggtgaacctgatcccgacgttcctgtggcccaccccgtgcagccctccatggccgatgtcattactatagatgacaccggaatgggaaaagtaccggcctctgtgcctatctcttctcgttctactgggaccgatgaggcgctactccccggtgagaagaagagatcccacaagcaccggcgtcgaactgataaggaggtgacgtacactggccgggatgtccagggtaccggtgcgaagaggcaaaagaaagatcacccgggatcagggccgtcaccttcccttggcctgttatctcccgccgttccggtaatccccaagaaacccatcaagcagctgctgaacgaatacggggtcgccgatgaaaagttcgtgcagtccatgcttggggatctgaaggatatcgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgagcaccgatgatgcgggcactctttaatgtgtacgccatcgacgccagcgaggaggatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtaccttcatggcgagaaggccaagctggagaaggagcgggactcgttgagggctgagatggccgcctccaagcagcggattgcggagcttgagggcgaggttgctgaggcgcgggaggaggtaaagaatgcccgggactccgagaagaaggctgtagagtctgtcgtctcatggaaggagaaagcagactctctggaggatcgcctacccacggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatctccatgctggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtagctgccgggtatctagatgaggccaaattcaggcggggtctcctggagaaaaggaaaaaagagctggaggcggcgggcaagtctggtgccggcgggtctcagagtaccgatggggatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

656

Amino Acids

73.19

Weight (kDa)

6.32

Isoelectric Point (pI)

47.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1510
AatII GACGTC 1 cut(s) 891
Acc36I ACCTGC 1 cut(s) 1510
Acc65I GGTACC 4 cut(s) 74, 168, 620, 1187
AccB1I GGYRCC 5 cut(s) 74, 168, 620, 1187, 1931
AccBSI CCGCTC 1 cut(s) 1564
AccI GTMKAC 2 cut(s) 183, 891
AccII CGCG 3 cut(s) 438, 440, 1639
AclWI GGATC 8 cut(s) 127, 277, 965, 1119, 1231, 1359, 1734, 1968
AcoI YGGCCR 4 cut(s) 297, 1011, 1171, 1587
AcsI RAATTY 2 cut(s) 4, 1871
AcuI CTGAAG 3 cut(s) 171, 1376, 1511
AcyI GRCGYC 3 cut(s) 888, 1141, 1467
AdeI CACNNNGTG 1 cut(s) 997
AgeI ACCGGT 2 cut(s) 165, 1190
AgsI TTSAA 2 cut(s) 629, 926
AhdI GACNNNNNGTC 1 cut(s) 898
AjnI CCWGG 6 cut(s) 101, 140, 861, 1182, 1401, 1887
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
Alw21I GWGCWC 2 cut(s) 722, 1429
Alw26I GTCTC 6 cut(s) 251, 923, 1421, 1699, 1889, 1947
AlwI GGATC 8 cut(s) 127, 277, 965, 1119, 1231, 1359, 1734, 1968
AlwNI CAGNNNCTG 1 cut(s) 1300
Ama87I CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
ApeKI GCWGC 8 cut(s) 610, 1000, 1294, 1297, 1600, 1799, 1802, 1847
ApoI RAATTY 2 cut(s) 4, 1871
ArsI GACNNNNNNTTYG 2 cut(s) 1299, 1331
AsiGI ACCGGT 2 cut(s) 165, 1190
Asp718I GGTACC 4 cut(s) 74, 168, 620, 1187
AspA2I CCTAGG 2 cut(s) 172, 895
AspLEI GCGC 3 cut(s) 440, 1102, 1639
AspS9I GGNCC 8 cut(s) 207, 345, 397, 640, 918, 988, 1089, 1229
AsuHPI GGTGA 8 cut(s) 266, 499, 974, 1124, 1171, 1208, 1227, 1534
AvaI CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
AvaII GGWCC 6 cut(s) 207, 345, 397, 640, 918, 1089
AvrII CCTAGG 2 cut(s) 172, 895
BaeGI GKGCMC 1 cut(s) 1444
BalI TGGCCA 1 cut(s) 299
BanI GGYRCC 5 cut(s) 74, 168, 620, 1187, 1931
BanII GRGCYC 1 cut(s) 722
BauI CACGAG 3 cut(s) 32, 910, 1748
BbsI GAAGAC 1 cut(s) 126
Bbv12I GWGCWC 2 cut(s) 722, 1429
BbvCI CCTCAGC 1 cut(s) 1632
BbvI GCAGC 8 cut(s) 622, 1012, 1284, 1306, 1612, 1786, 1789, 1834
BccI CCATC 8 cut(s) 82, 379, 820, 838, 1295, 1469, 1579, 1949
BceAI ACGGC 6 cut(s) 347, 680, 1216, 1247, 1398, 1739
BcgI CGANNNNNNTGC 4 cut(s) 313, 347, 1124, 1158
BciT130I CCWGG 6 cut(s) 103, 142, 863, 1184, 1403, 1889
BciVI GTATCC 3 cut(s) 106, 950, 1474
BcoDI GTCTC 6 cut(s) 251, 923, 1421, 1699, 1889, 1947
BfaI CTAG 7 cut(s) 173, 501, 518, 572, 758, 896, 1859
BfmI CTRYAG 2 cut(s) 1026, 1680
BfoI RGCGCY 1 cut(s) 1103
BfuAI ACCTGC 1 cut(s) 1510
BfuI GTATCC 3 cut(s) 106, 950, 1474
BlnI CCTAGG 2 cut(s) 172, 895
Bme18I GGWCC 6 cut(s) 207, 345, 397, 640, 918, 1089
BmeRI GACNNNNNGTC 1 cut(s) 898
BmeT110I CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
BmgT120I GGNCC 8 cut(s) 207, 345, 397, 640, 918, 988, 1089, 1229
BmrI ACTGGG 2 cut(s) 225, 1095
BmsI GCATC 2 cut(s) 862, 1425
BmuI ACTGGG 2 cut(s) 225, 1095
BpiI GAAGAC 1 cut(s) 126
BplI GAGNNNNNCTC 6 cut(s) 704, 736, 1553, 1585, 1772, 1804
BpmI CTGGAG 4 cut(s) 1574, 1742, 1910, 1931
Bpu10I CCTNAGC 2 cut(s) 318, 1632
BpuEI CTTGAG 2 cut(s) 445, 1637
BsaBI GATNNNNATC 2 cut(s) 1485, 1959
BsaHI GRCGYC 3 cut(s) 888, 1141, 1467
BsaI GGTCTC 3 cut(s) 923, 1889, 1947
BsaWI WCCGGW 5 cut(s) 165, 283, 1037, 1190, 1267
BsaXI ACNNNNNCTCC 4 cut(s) 1148, 1178, 1754, 1784
Bse118I RCCGGY 5 cut(s) 165, 1054, 1137, 1190, 1934
Bse1I ACTGG 5 cut(s) 130, 220, 643, 1090, 1174
Bse8I GATNNNNATC 2 cut(s) 1485, 1959
BseBI CCWGG 6 cut(s) 103, 142, 863, 1184, 1403, 1889
BseGI GGATG 5 cut(s) 93, 732, 831, 835, 1183
BseJI GATNNNNATC 2 cut(s) 1485, 1959
BseMII CTCAG 5 cut(s) 252, 1572, 1623, 1788, 1958
BseNI ACTGG 5 cut(s) 130, 220, 643, 1090, 1174
BseRI GAGGAG 6 cut(s) 730, 830, 1490, 1511, 1658, 1775
BseSI GKGCMC 1 cut(s) 1444
BseXI GCAGC 8 cut(s) 622, 1012, 1284, 1306, 1612, 1786, 1789, 1834
BsgI GTGCAG 3 cut(s) 863, 1019, 1355
Bsh1236I CGCG 3 cut(s) 438, 440, 1639
Bsh1285I CGRYCG 3 cut(s) 166, 704, 1375
BshNI GGYRCC 5 cut(s) 74, 168, 620, 1187, 1931
BshTI ACCGGT 2 cut(s) 165, 1190
BsiEI CGRYCG 3 cut(s) 166, 704, 1375
BsiHKAI GWGCWC 2 cut(s) 722, 1429
BsiHKCI CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
BslFI GGGAC 6 cut(s) 358, 410, 653, 1102, 1580, 1676
BsmAI GTCTC 6 cut(s) 251, 923, 1421, 1699, 1889, 1947
BsmBI CGTCTC 2 cut(s) 1421, 1699
BsmFI GGGAC 6 cut(s) 358, 410, 653, 1102, 1580, 1676
BsmI GAATGC 3 cut(s) 312, 364, 1660
Bso31I GGTCTC 3 cut(s) 923, 1889, 1947
BsoBI CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
Bsp1286I GDGCHC 3 cut(s) 722, 1429, 1444
Bsp19I CCATGG 1 cut(s) 1008
BspCNI CTCAG 5 cut(s) 253, 1573, 1624, 1787, 1957
BspFNI CGCG 3 cut(s) 438, 440, 1639
BspHI TCATGA 1 cut(s) 1824
BspMI ACCTGC 1 cut(s) 1510
BspPI GGATC 8 cut(s) 127, 277, 965, 1119, 1231, 1359, 1734, 1968
BspT107I GGYRCC 5 cut(s) 74, 168, 620, 1187, 1931
BspTNI GGTCTC 3 cut(s) 923, 1889, 1947
BsrBI CCGCTC 1 cut(s) 1564
BsrFI RCCGGY 5 cut(s) 165, 1054, 1137, 1190, 1934
BsrI ACTGG 5 cut(s) 130, 220, 643, 1090, 1174
BssAI RCCGGY 5 cut(s) 165, 1054, 1137, 1190, 1934
BssNI GRCGYC 3 cut(s) 888, 1141, 1467
BssSI CACGAG 3 cut(s) 32, 910, 1748
BssT1I CCWWGG 4 cut(s) 172, 895, 1008, 1243
Bst2BI CACGAG 3 cut(s) 32, 910, 1748
Bst2UI CCWGG 6 cut(s) 103, 142, 863, 1184, 1403, 1889
Bst4CI ACNGT 4 cut(s) 79, 295, 487, 962
Bst6I CTCTTC 7 cut(s) 657, 668, 785, 921, 1078, 1115, 1193
BstACI GRCGYC 3 cut(s) 888, 1141, 1467
BstAPI GCANNNNNTGC 1 cut(s) 1342
BstC8I GCNNGC 8 cut(s) 147, 336, 407, 1440, 1471, 1797, 1921, 1936
BstDEI CTNAG 6 cut(s) 261, 318, 1581, 1632, 1774, 1944
BstDSI CCRYGG 3 cut(s) 1008, 1737, 1755
BstEII GGTNACC 1 cut(s) 487
BstF5I GGATG 5 cut(s) 93, 732, 831, 835, 1183
BstFNI CGCG 3 cut(s) 438, 440, 1639
BstH2I RGCGCY 1 cut(s) 1103
BstHHI GCGC 3 cut(s) 440, 1102, 1639
BstMAI GTCTC 6 cut(s) 251, 923, 1421, 1699, 1889, 1947
BstMCI CGRYCG 3 cut(s) 166, 704, 1375
BstMWI GCNNNNNNNGC 5 cut(s) 146, 415, 1342, 1466, 1586
BstNI CCWGG 6 cut(s) 103, 142, 863, 1184, 1403, 1889
BstNSI RCATGY 2 cut(s) 334, 853
BstPI GGTNACC 1 cut(s) 487
BstSFI CTRYAG 2 cut(s) 1026, 1680
BstSLI GKGCMC 1 cut(s) 1444
BstUI CGCG 3 cut(s) 438, 440, 1639
BstV1I GCAGC 8 cut(s) 622, 1012, 1284, 1306, 1612, 1786, 1789, 1834
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 3 cut(s) 269, 1124, 1351
BstYI RGATCY 3 cut(s) 269, 1124, 1351
BsuI GTATCC 3 cut(s) 106, 950, 1474
BtgI CCRYGG 3 cut(s) 1008, 1737, 1755
BtsCI GGATG 5 cut(s) 93, 732, 831, 835, 1183
BtsIMutI CAGTG 2 cut(s) 300, 1167
BveI ACCTGC 1 cut(s) 1510
Cac8I GCNNGC 8 cut(s) 147, 336, 407, 1440, 1471, 1797, 1921, 1936
CaiI CAGNNNCTG 1 cut(s) 1300
CciI TCATGA 1 cut(s) 1824
CfoI GCGC 3 cut(s) 440, 1102, 1639
Cfr10I RCCGGY 5 cut(s) 165, 1054, 1137, 1190, 1934
Cfr13I GGNCC 8 cut(s) 207, 345, 397, 640, 918, 988, 1089, 1229
Cfr9I CCCGGG 3 cut(s) 684, 1219, 1659
CseI GACGC 3 cut(s) 842, 1130, 1475
CspAI ACCGGT 2 cut(s) 165, 1190
CviAII CATG 8 cut(s) 331, 850, 1009, 1342, 1535, 1698, 1792, 1825
DdeI CTNAG 6 cut(s) 261, 318, 1581, 1632, 1774, 1944
DraIII CACNNNGTG 1 cut(s) 997
DriI GACNNNNNGTC 1 cut(s) 898
EaeI YGGCCR 4 cut(s) 297, 1011, 1171, 1587
Eam1104I CTCTTC 7 cut(s) 657, 668, 785, 921, 1078, 1115, 1193
Eam1105I GACNNNNNGTC 1 cut(s) 898
EarI CTCTTC 7 cut(s) 657, 668, 785, 921, 1078, 1115, 1193
Ecl136II GAGCTC 1 cut(s) 720
Eco130I CCWWGG 4 cut(s) 172, 895, 1008, 1243
Eco24I GRGCYC 1 cut(s) 722
Eco31I GGTCTC 3 cut(s) 923, 1889, 1947
Eco32I GATATC 1 cut(s) 1363
Eco47I GGWCC 6 cut(s) 207, 345, 397, 640, 918, 1089
Eco53kI GAGCTC 1 cut(s) 720
Eco57I CTGAAG 3 cut(s) 171, 1376, 1511
Eco88I CYCGRG 5 cut(s) 305, 684, 1219, 1422, 1659
Eco91I GGTNACC 1 cut(s) 487
EcoICRI GAGCTC 1 cut(s) 720
EcoO109I RGGNCCY 3 cut(s) 207, 345, 397
EcoO65I GGTNACC 1 cut(s) 487
EcoRII CCWGG 6 cut(s) 101, 140, 861, 1182, 1401, 1887
EcoRV GATATC 1 cut(s) 1363
EcoT14I CCWWGG 4 cut(s) 172, 895, 1008, 1243
EcoT38I GRGCYC 1 cut(s) 722
ErhI CCWWGG 4 cut(s) 172, 895, 1008, 1243
Esp3I CGTCTC 2 cut(s) 1421, 1699
FaeI CATG 8 cut(s) 334, 853, 1012, 1345, 1538, 1701, 1795, 1828
FalI AAGNNNNNCTT 4 cut(s) 402, 434, 918, 950
FaqI GGGAC 6 cut(s) 358, 410, 653, 1102, 1580, 1676
FatI CATG 8 cut(s) 330, 849, 1008, 1341, 1534, 1697, 1791, 1824
FauI CCCGC 8 cut(s) 472, 1267, 1431, 1557, 1632, 1872, 1912, 1931
FblI GTMKAC 2 cut(s) 183, 891
FokI GGATG 5 cut(s) 100, 719, 838, 842, 1190
FriOI GRGCYC 1 cut(s) 722
FspBI CTAG 7 cut(s) 173, 501, 518, 572, 758, 896, 1859
GlaI GCGC 3 cut(s) 439, 1101, 1638
GsuI CTGGAG 4 cut(s) 1574, 1742, 1910, 1931
HaeII RGCGCY 1 cut(s) 1103
HgaI GACGC 3 cut(s) 842, 1130, 1475
HhaI GCGC 3 cut(s) 440, 1102, 1639
Hin1I GRCGYC 3 cut(s) 888, 1141, 1467
Hin1II CATG 8 cut(s) 334, 853, 1012, 1345, 1538, 1701, 1795, 1828
Hin6I GCGC 3 cut(s) 438, 1100, 1637
HinP1I GCGC 3 cut(s) 438, 1100, 1637
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HinfI GANTC 9 cut(s) 92, 242, 729, 913, 1408, 1568, 1664, 1685, 1715
HphI GGTGA 8 cut(s) 266, 499, 974, 1124, 1171, 1208, 1227, 1534
Hpy166II GTNNAC 7 cut(s) 157, 184, 445, 892, 965, 1167, 1456
Hpy188III TCNNGA 6 cut(s) 47, 305, 974, 1721, 1825, 1859
Hpy8I GTNNAC 7 cut(s) 157, 184, 445, 892, 965, 1167, 1456
Hpy99I CGWCG 7 cut(s) 127, 251, 890, 893, 980, 1146, 1469
HpyAV CCTTC 9 cut(s) 271, 1248, 1351, 1486, 1537, 1541, 1552, 1669, 1696
HpyCH4III ACNGT 4 cut(s) 79, 295, 487, 962
HpyCH4IV ACGT 3 cut(s) 888, 978, 1163
HpyCH4V TGCA 3 cut(s) 880, 1000, 1336
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 415, 1342, 1466, 1586
HpyF3I CTNAG 6 cut(s) 261, 318, 1581, 1632, 1774, 1944
HpySE526I ACGT 3 cut(s) 888, 978, 1163
Hsp92I GRCGYC 3 cut(s) 888, 1141, 1467
Hsp92II CATG 8 cut(s) 334, 853, 1012, 1345, 1538, 1701, 1795, 1828
HspAI GCGC 3 cut(s) 438, 1100, 1637
KflI GGGWCCC 1 cut(s) 345
KpnI GGTACC 4 cut(s) 78, 172, 624, 1191
KroI GCCGGC 1 cut(s) 1934
KroNI GCCGGC 1 cut(s) 1936
LmnI GCTCC 5 cut(s) 286, 717, 777, 1561, 1612
Lsp1109I GCAGC 8 cut(s) 622, 1012, 1284, 1306, 1612, 1786, 1789, 1834
LweI GCATC 2 cut(s) 862, 1425
MaeI CTAG 7 cut(s) 173, 501, 518, 572, 758, 896, 1859
MaeII ACGT 3 cut(s) 888, 978, 1163
MaeIII GTNAC 5 cut(s) 289, 487, 520, 1159, 1233
MbiI CCGCTC 1 cut(s) 1564
MflI RGATCY 3 cut(s) 269, 1124, 1351
MhlI GDGCHC 3 cut(s) 722, 1429, 1444
MlsI TGGCCA 1 cut(s) 299
MluCI AATT 4 cut(s) 4, 81, 188, 1871
MluNI TGGCCA 1 cut(s) 299
MlyI GAGTC 6 cut(s) 251, 922, 1562, 1658, 1694, 1709
MmeI TCCRAC 2 cut(s) 270, 684
Mox20I TGGCCA 1 cut(s) 299
MroNI GCCGGC 1 cut(s) 1934
MscI TGGCCA 1 cut(s) 299
MseI TTAA 2 cut(s) 1449, 1833
MslI CAYNNNNRTG 2 cut(s) 854, 1040
Msp20I TGGCCA 1 cut(s) 299
MspA1I CMGCKG 3 cut(s) 613, 1297, 1603
Mva1269I GAATGC 3 cut(s) 312, 364, 1660
MvaI CCWGG 6 cut(s) 103, 142, 863, 1184, 1403, 1889
MvnI CGCG 3 cut(s) 438, 440, 1639
MwoI GCNNNNNNNGC 5 cut(s) 146, 415, 1342, 1466, 1586
NaeI GCCGGC 1 cut(s) 1936
NcoI CCATGG 1 cut(s) 1008
NgoMIV GCCGGC 1 cut(s) 1934
NlaIII CATG 8 cut(s) 334, 853, 1012, 1345, 1538, 1701, 1795, 1828
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 4 cut(s) 289, 487, 1159, 1233
NspI RCATGY 2 cut(s) 334, 853
PagI TCATGA 1 cut(s) 1824
PaqCI CACCTGC 1 cut(s) 1510
PcsI WCGNNNNNNNCGW 5 cut(s) 122, 209, 908, 1317, 1470
PctI GAATGC 3 cut(s) 312, 364, 1660
PdiI GCCGGC 1 cut(s) 1936
PfeI GAWTC 3 cut(s) 92, 729, 1408
PfoI TCCNGGA 1 cut(s) 1887
PinAI ACCGGT 2 cut(s) 165, 1190
PleI GAGTC 6 cut(s) 250, 921, 1562, 1658, 1693, 1709
PpsI GAGTC 6 cut(s) 250, 921, 1562, 1658, 1693, 1709
PpuMI RGGWCCY 3 cut(s) 207, 345, 397
Psp124BI GAGCTC 1 cut(s) 722
Psp5II RGGWCCY 3 cut(s) 207, 345, 397
Psp6I CCWGG 6 cut(s) 101, 140, 861, 1182, 1401, 1887
PspEI GGTNACC 1 cut(s) 487
PspGI CCWGG 6 cut(s) 101, 140, 861, 1182, 1401, 1887
PspPI GGNCC 8 cut(s) 207, 345, 397, 640, 918, 988, 1089, 1229
PspPPI RGGWCCY 3 cut(s) 207, 345, 397
PstNI CAGNNNCTG 1 cut(s) 1300
PsuI RGATCY 3 cut(s) 269, 1124, 1351
PvuII CAGCTG 2 cut(s) 613, 1297
RseI CAYNNNNRTG 2 cut(s) 854, 1040
SacI GAGCTC 1 cut(s) 722
SalI GTCGAC 1 cut(s) 890
SaqAI TTAA 2 cut(s) 1449, 1833
Sau96I GGNCC 8 cut(s) 207, 345, 397, 640, 918, 988, 1089, 1229
SchI GAGTC 6 cut(s) 251, 922, 1562, 1658, 1694, 1709
SduI GDGCHC 3 cut(s) 722, 1429, 1444
SfaNI GCATC 2 cut(s) 862, 1425
SfcI CTRYAG 2 cut(s) 1026, 1680
SgrAI CRCCGGYG 1 cut(s) 1137
SinI GGWCC 6 cut(s) 207, 345, 397, 640, 918, 1089
SmaI CCCGGG 3 cut(s) 686, 1221, 1661
SmiMI CAYNNNNRTG 2 cut(s) 854, 1040
SmlI CTYRAG 2 cut(s) 460, 1616
SmoI CTYRAG 2 cut(s) 460, 1616
Sse9I AATT 4 cut(s) 4, 81, 188, 1871
SspMI CTAG 7 cut(s) 173, 501, 518, 572, 758, 896, 1859
SstI GAGCTC 1 cut(s) 722
StyI CCWWGG 4 cut(s) 172, 895, 1008, 1243
TaaI ACNGT 4 cut(s) 79, 295, 487, 962
TaiI ACGT 3 cut(s) 891, 981, 1166
TaqII GACCGA 2 cut(s) 906, 1106
TasI AATT 4 cut(s) 4, 81, 188, 1871
TatI WGTACW 2 cut(s) 456, 1764
TauI GCSGC 3 cut(s) 517, 1592, 1919
TfiI GAWTC 3 cut(s) 92, 729, 1408
Tru1I TTAA 2 cut(s) 1449, 1833
Tru9I TTAA 2 cut(s) 1449, 1833
TscAI CASTG 2 cut(s) 300, 1174
TseFI GTSAC 4 cut(s) 289, 487, 1159, 1233
TseI GCWGC 8 cut(s) 610, 1000, 1294, 1297, 1600, 1799, 1802, 1847
Tsp45I GTSAC 4 cut(s) 289, 487, 1159, 1233
TspDTI ATGAA 5 cut(s) 17, 721, 1338, 1523, 1841
TspGWI ACGGA 1 cut(s) 1754
TspMI CCCGGG 3 cut(s) 684, 1219, 1659
TspRI CASTG 2 cut(s) 300, 1174
VpaK11BI GGWCC 6 cut(s) 207, 345, 397, 640, 918, 1089
XapI RAATTY 2 cut(s) 4, 1871
XbaI TCTAGA 1 cut(s) 1858
XceI RCATGY 2 cut(s) 334, 853
XmaI CCCGGG 3 cut(s) 684, 1219, 1659
XmaJI CCTAGG 2 cut(s) 172, 895
XmiI GTMKAC 2 cut(s) 183, 891
XspI CTAG 7 cut(s) 173, 501, 518, 572, 758, 896, 1859
ZraI GACGTC 1 cut(s) 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.