Rmu_sc0007144.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007144.1
OG0000087
Physical Location & Seq
Reverse (-)
23930 .. 25729
1800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007144.1_g000007.1.cds

Sequence Viewer

Length: 1650 bp
atgctgaacctgtcaccggggcagttgaccccgaatgccattcctcaaatatacaatatgatggccatgtgggacttgtgccaacaagggtggccttccataaataaattccacgcggtacatagggtcctgtactcaaggaagttgtcttgtgcgggtacgattacggttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaaggtggaggaataaagtattcctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatttgaagtggaaaggaagaggatagcccgggtatatgccatttggtcagagaaagagaggagctcttatagattcatccgacactctatactttataggctcgggctagggtggctccccgtgaaagcgccgaagaggaaaccccggaaaggcaaagaggaagacaaaatggatgatgctcagttgatgaatatgctgatgggccaggaggaaaacgcccttcacatcgatgtcgacctagggtcaaaaggtacgagtcagtccgttgaagagaccctactggatatcaccgatgagggatatggggaacctgatcctgacgctcccgtgacccaagttatgcagccctctgttgccgacgtcattccaatagatgataccgggaaggggaaggtactggtccccgtgtctatttcctctcgctccgctgggagggatgaggcattacttcttggtgagaagaaaatattccataggcaccggcatcgaagtgataagcaggaggtgacgtatactggccgggatgttcagggtttcggtgcgaagagacagaagaaagatcacccaggaccagagtcttcgccttcgcttggcttattgtctcctacccttcctgtgatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggtgacctgaaggacattgacctctaccgggtgcggaccaaggacaatacgccccaagagaatcgccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacgcgattgacgccagcgaggaagatactcatctgaaggaggagcttagcaatctctccggccaggtgaagtatctccatggcgagaaggccaagctggagaaggagcgagactcattgaaggctgagatggccgcagctaagcagctgatcgcggagcttgagggtgaagtctctgaggtgcgggaagaggtgaaaaactctcgggactccgagaaaaaagctgcagagtttgccgtgtcatggaaggagaaggcagactccctggaggatcgccttcccgcggagaggcacgaggccgtggaagagtacaagtcctccgaagagctcatcgctatgctaactgctgctcaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatacctggatgagactaaatttaggaggggtctccttgagaagaagaagaaagatcgggaggcggtggccaagtctggtgccggtgggtcccagagtaccggtggcaagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

549

Amino Acids

62.06

Weight (kDa)

8.99

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 696
Acc65I GGTACC 1 cut(s) 296
AccB1I GGYRCC 3 cut(s) 296, 810, 1610
AccI GTMKAC 2 cut(s) 567, 845
AccII CGCG 4 cut(s) 116, 1139, 1289, 1418
AclWI GGATC 3 cut(s) 641, 946, 1413
AcoI YGGCCR 6 cut(s) 63, 850, 1195, 1266, 1527, 1599
AcsI RAATTY 2 cut(s) 107, 1550
AcuI CTGAAG 2 cut(s) 1055, 1190
AcyI GRCGYC 2 cut(s) 693, 1146
AgeI ACCGGT 2 cut(s) 293, 1631
AgsI TTSAA 5 cut(s) 338, 602, 1129, 1255, 1513
AhdI GACNNNNNGTC 1 cut(s) 574
AhlI ACTAGT 1 cut(s) 193
AjnI CCWGG 5 cut(s) 537, 898, 1197, 1398, 1536
Alw21I GWGCWC 2 cut(s) 398, 1464
Alw26I GTCTC 7 cut(s) 599, 874, 939, 1239, 1312, 1538, 1568
AlwI GGATC 3 cut(s) 641, 946, 1413
Ama87I CYCGRG 4 cut(s) 360, 434, 1101, 1338
ApeKI GCWGC 7 cut(s) 286, 676, 973, 1271, 1279, 1358, 1481
ApoI RAATTY 2 cut(s) 107, 1550
AsiGI ACCGGT 2 cut(s) 293, 1631
Asp700I GAANNNNTTC 1 cut(s) 800
Asp718I GGTACC 1 cut(s) 296
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 1 cut(s) 463
AspS9I GGNCC 8 cut(s) 127, 316, 535, 733, 902, 1017, 1062, 1620
AsuC2I CCSGG 9 cut(s) 18, 361, 362, 478, 715, 854, 1055, 1102, 1103
AsuHPI GGTGA 9 cut(s) 6, 613, 800, 850, 887, 1040, 1213, 1313, 1339
AvaI CYCGRG 4 cut(s) 360, 434, 1101, 1338
AvaII GGWCC 7 cut(s) 127, 316, 733, 902, 1017, 1062, 1620
AvrII CCTAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 1123
BalI TGGCCA 2 cut(s) 65, 1601
BanI GGYRCC 3 cut(s) 296, 810, 1610
BanII GRGCYC 2 cut(s) 398, 1464
BarI GAAGNNNNNNTAC 2 cut(s) 594, 626
BauI CACGAG 1 cut(s) 1427
BbsI GAAGAC 2 cut(s) 501, 903
Bbv12I GWGCWC 2 cut(s) 398, 1464
BbvI GCAGC 7 cut(s) 298, 688, 985, 1283, 1291, 1345, 1468
BccI CCATC 4 cut(s) 55, 526, 974, 1258
BceAI ACGGC 3 cut(s) 1077, 1355, 1418
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 5 cut(s) 539, 900, 1199, 1400, 1538
BciVI GTATCC 1 cut(s) 1526
BcnI CCSGG 9 cut(s) 18, 361, 362, 478, 715, 854, 1055, 1102, 1103
BcoDI GTCTC 7 cut(s) 599, 874, 939, 1239, 1312, 1538, 1568
BcuI ACTAGT 1 cut(s) 193
BfaI CTAG 5 cut(s) 177, 194, 248, 440, 572
BfmI CTRYAG 1 cut(s) 1359
BfoI RGCGCY 1 cut(s) 464
BfuI GTATCC 1 cut(s) 1526
BlnI CCTAGG 1 cut(s) 571
BlpI GCTNAGC 2 cut(s) 1181, 1275
Bme18I GGWCC 7 cut(s) 127, 316, 733, 902, 1017, 1062, 1620
BmeRI GACNNNNNGTC 1 cut(s) 574
BmeT110I CYCGRG 4 cut(s) 360, 434, 1101, 1338
BmgT120I GGNCC 8 cut(s) 127, 316, 535, 733, 902, 1017, 1062, 1620
BmsI GCATC 3 cut(s) 499, 826, 1104
BoxI GACNNNNGTC 1 cut(s) 907
BpiI GAAGAC 2 cut(s) 501, 903
BplI GAGNNNNNCTC 4 cut(s) 380, 412, 1232, 1264
BpmI CTGGAG 2 cut(s) 1253, 1421
Bpu1102I GCTNAGC 2 cut(s) 1181, 1275
BpuEI CTTGAG 4 cut(s) 121, 1316, 1470, 1589
BpuMI CCSGG 9 cut(s) 18, 361, 362, 478, 715, 854, 1055, 1102, 1103
Bsa29I ATCGAT 1 cut(s) 561
BsaBI GATNNNNATC 1 cut(s) 1164
BsaHI GRCGYC 2 cut(s) 693, 1146
BsaI GGTCTC 2 cut(s) 599, 1568
BsaWI WCCGGW 2 cut(s) 293, 1631
BsaXI ACNNNNNCTCC 4 cut(s) 827, 857, 1436, 1466
Bse118I RCCGGY 4 cut(s) 293, 813, 1613, 1631
Bse1I ACTGG 4 cut(s) 319, 618, 735, 853
Bse8I GATNNNNATC 1 cut(s) 1164
BseBI CCWGG 5 cut(s) 539, 900, 1199, 1400, 1538
BseCI ATCGAT 1 cut(s) 561
BseGI GGATG 5 cut(s) 408, 511, 775, 862, 1546
BseJI GATNNNNATC 1 cut(s) 1164
BseMII CTCAG 3 cut(s) 527, 1251, 1302
BseNI ACTGG 4 cut(s) 319, 618, 735, 853
BseRI GAGGAG 2 cut(s) 406, 1190
BseSI GKGCMC 1 cut(s) 1123
BseX3I CGGCCG 1 cut(s) 1527
BseXI GCAGC 7 cut(s) 298, 688, 985, 1283, 1291, 1345, 1468
BseYI CCCAGC 2 cut(s) 251, 761
Bsh1236I CGCG 4 cut(s) 116, 1139, 1289, 1418
Bsh1285I CGRYCG 1 cut(s) 1530
BshNI GGYRCC 3 cut(s) 296, 810, 1610
BshTI ACCGGT 2 cut(s) 293, 1631
BshVI ATCGAT 1 cut(s) 561
BsiEI CGRYCG 1 cut(s) 1530
BsiHKAI GWGCWC 2 cut(s) 398, 1464
BsiHKCI CYCGRG 4 cut(s) 360, 434, 1101, 1338
BslFI GGGAC 5 cut(s) 86, 329, 719, 1355, 1606
BsmAI GTCTC 7 cut(s) 599, 874, 939, 1239, 1312, 1538, 1568
BsmFI GGGAC 5 cut(s) 86, 329, 719, 1355, 1606
BsmI GAATGC 1 cut(s) 40
Bso31I GGTCTC 2 cut(s) 599, 1568
BsoBI CYCGRG 4 cut(s) 360, 434, 1101, 1338
Bsp1286I GDGCHC 3 cut(s) 398, 1123, 1464
Bsp143I GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
Bsp1720I GCTNAGC 2 cut(s) 1181, 1275
Bsp19I CCATGG 1 cut(s) 1213
BspCNI CTCAG 3 cut(s) 526, 1252, 1303
BspDI ATCGAT 1 cut(s) 561
BspFNI CGCG 4 cut(s) 116, 1139, 1289, 1418
BspHI TCATGA 1 cut(s) 1503
BspMAI CTGCAG 1 cut(s) 1363
BspPI GGATC 3 cut(s) 641, 946, 1413
BspQI GCTCTTC 1 cut(s) 1452
BspT107I GGYRCC 3 cut(s) 296, 810, 1610
BspTNI GGTCTC 2 cut(s) 599, 1568
BsrFI RCCGGY 4 cut(s) 293, 813, 1613, 1631
BsrI ACTGG 4 cut(s) 319, 618, 735, 853
BssAI RCCGGY 4 cut(s) 293, 813, 1613, 1631
BssMI GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
BssNAI GTATAC 1 cut(s) 846
BssNI GRCGYC 2 cut(s) 693, 1146
BssSI CACGAG 1 cut(s) 1427
BssT1I CCWWGG 3 cut(s) 571, 1065, 1213
Bst1107I GTATAC 1 cut(s) 846
Bst2BI CACGAG 1 cut(s) 1427
Bst2UI CCWGG 5 cut(s) 539, 900, 1199, 1400, 1538
Bst4CI ACNGT 1 cut(s) 169
Bst6I CTCTTC 8 cut(s) 344, 461, 597, 872, 1130, 1317, 1434, 1452
BstACI GRCGYC 2 cut(s) 693, 1146
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstC8I GCNNGC 3 cut(s) 1119, 1150, 1640
BstDEI CTNAG 5 cut(s) 513, 1181, 1260, 1275, 1311
BstDSI CCRYGG 3 cut(s) 1213, 1416, 1434
BstEII GGTNACC 1 cut(s) 1028
BstF5I GGATG 5 cut(s) 408, 511, 775, 862, 1546
BstFNI CGCG 4 cut(s) 116, 1139, 1289, 1418
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 1 cut(s) 463
BstKTI GATC 6 cut(s) 649, 895, 954, 1287, 1408, 1588
BstMAI GTCTC 7 cut(s) 599, 874, 939, 1239, 1312, 1538, 1568
BstMBI GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
BstMCI CGRYCG 1 cut(s) 1530
BstMWI GCNNNNNNNGC 6 cut(s) 445, 970, 1021, 1145, 1265, 1367
BstNI CCWGG 5 cut(s) 539, 900, 1199, 1400, 1538
BstNSI RCATGY 1 cut(s) 208
BstPAI GACNNNNGTC 1 cut(s) 907
BstPI GGTNACC 1 cut(s) 1028
BstSFI CTRYAG 1 cut(s) 1359
BstSLI GKGCMC 1 cut(s) 1123
BstUI CGCG 4 cut(s) 116, 1139, 1289, 1418
BstV1I GCAGC 7 cut(s) 298, 688, 985, 1283, 1291, 1345, 1468
BstV2I GAAGAC 2 cut(s) 501, 903
BstZ17I GTATAC 1 cut(s) 846
BstZI CGGCCG 1 cut(s) 1527
Bsu15I ATCGAT 1 cut(s) 561
BsuI GTATCC 1 cut(s) 1526
BsuTUI ATCGAT 1 cut(s) 561
BtgI CCRYGG 3 cut(s) 1213, 1416, 1434
BtgZI GCGATG 1 cut(s) 1450
BtsCI GGATG 5 cut(s) 408, 511, 775, 862, 1546
Cac8I GCNNGC 3 cut(s) 1119, 1150, 1640
CciI TCATGA 1 cut(s) 1503
CfoI GCGC 1 cut(s) 463
Cfr10I RCCGGY 4 cut(s) 293, 813, 1613, 1631
Cfr13I GGNCC 8 cut(s) 127, 316, 535, 733, 902, 1017, 1062, 1620
Cfr42I CCGCGG 1 cut(s) 1419
Cfr9I CCCGGG 2 cut(s) 360, 1101
ClaI ATCGAT 1 cut(s) 561
CseI GACGC 2 cut(s) 662, 1154
CspAI ACCGGT 2 cut(s) 293, 1631
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 7 cut(s) 67, 205, 1021, 1111, 1214, 1377, 1504
DdeI CTNAG 5 cut(s) 513, 1181, 1260, 1275, 1311
DpnI GATC 6 cut(s) 648, 894, 953, 1286, 1407, 1587
DpnII GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
DriI GACNNNNNGTC 1 cut(s) 574
EaeI YGGCCR 6 cut(s) 63, 850, 1195, 1266, 1527, 1599
EagI CGGCCG 1 cut(s) 1527
Eam1104I CTCTTC 8 cut(s) 344, 461, 597, 872, 1130, 1317, 1434, 1452
Eam1105I GACNNNNNGTC 1 cut(s) 574
EarI CTCTTC 8 cut(s) 344, 461, 597, 872, 1130, 1317, 1434, 1452
Ecl136II GAGCTC 2 cut(s) 396, 1462
EclXI CGGCCG 1 cut(s) 1527
Eco130I CCWWGG 3 cut(s) 571, 1065, 1213
Eco24I GRGCYC 2 cut(s) 398, 1464
Eco31I GGTCTC 2 cut(s) 599, 1568
Eco32I GATATC 1 cut(s) 619
Eco47I GGWCC 7 cut(s) 127, 316, 733, 902, 1017, 1062, 1620
Eco52I CGGCCG 1 cut(s) 1527
Eco53kI GAGCTC 2 cut(s) 396, 1462
Eco57I CTGAAG 2 cut(s) 1055, 1190
Eco88I CYCGRG 4 cut(s) 360, 434, 1101, 1338
Eco91I GGTNACC 1 cut(s) 1028
EcoICRI GAGCTC 2 cut(s) 396, 1462
EcoO109I RGGNCCY 2 cut(s) 127, 1620
EcoO65I GGTNACC 1 cut(s) 1028
EcoRII CCWGG 5 cut(s) 537, 898, 1197, 1398, 1536
EcoRV GATATC 1 cut(s) 619
EcoT14I CCWWGG 3 cut(s) 571, 1065, 1213
EcoT38I GRGCYC 2 cut(s) 398, 1464
ErhI CCWWGG 3 cut(s) 571, 1065, 1213
FaeI CATG 7 cut(s) 70, 208, 1024, 1114, 1217, 1380, 1507
FaqI GGGAC 5 cut(s) 86, 329, 719, 1355, 1606
FatI CATG 7 cut(s) 66, 204, 1020, 1110, 1213, 1376, 1503
FauI CCCGC 4 cut(s) 148, 1110, 1311, 1423
FblI GTMKAC 2 cut(s) 567, 845
FokI GGATG 5 cut(s) 395, 518, 782, 869, 1553
FriOI GRGCYC 2 cut(s) 398, 1464
FspBI CTAG 5 cut(s) 177, 194, 248, 440, 572
GlaI GCGC 1 cut(s) 462
GsaI CCCAGC 2 cut(s) 255, 765
GsuI CTGGAG 2 cut(s) 1253, 1421
HaeII RGCGCY 1 cut(s) 464
HgaI GACGC 2 cut(s) 662, 1154
HhaI GCGC 1 cut(s) 463
Hin1I GRCGYC 2 cut(s) 693, 1146
Hin1II CATG 7 cut(s) 70, 208, 1024, 1114, 1217, 1380, 1507
Hin6I GCGC 1 cut(s) 461
HinP1I GCGC 1 cut(s) 461
HincII GTYRAC 2 cut(s) 27, 568
HindII GTYRAC 2 cut(s) 27, 568
HinfI GANTC 8 cut(s) 405, 589, 908, 1087, 1106, 1247, 1343, 1394
HphI GGTGA 9 cut(s) 6, 613, 800, 850, 887, 1040, 1213, 1313, 1339
Hpy166II GTNNAC 4 cut(s) 27, 568, 846, 1135
Hpy188I TCNGA 6 cut(s) 382, 413, 1170, 1312, 1348, 1456
Hpy188III TCNNGA 5 cut(s) 650, 1340, 1487, 1504, 1589
Hpy8I GTNNAC 4 cut(s) 27, 568, 846, 1135
Hpy99I CGWCG 1 cut(s) 695
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 2 cut(s) 693, 842
HpyCH4V TGCA 2 cut(s) 676, 1361
HpyF10VI GCNNNNNNNGC 6 cut(s) 445, 970, 1021, 1145, 1265, 1367
HpyF3I CTNAG 5 cut(s) 513, 1181, 1260, 1275, 1311
HpySE526I ACGT 2 cut(s) 693, 842
Hsp92I GRCGYC 2 cut(s) 693, 1146
Hsp92II CATG 7 cut(s) 70, 208, 1024, 1114, 1217, 1380, 1507
HspAI GCGC 1 cut(s) 461
KflI GGGWCCC 1 cut(s) 1620
KpnI GGTACC 1 cut(s) 300
KspI CCGCGG 1 cut(s) 1419
Kzo9I GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
LguI GCTCTTC 1 cut(s) 1452
LmnI GCTCC 7 cut(s) 393, 453, 661, 761, 1177, 1240, 1291
Lsp1109I GCAGC 7 cut(s) 298, 688, 985, 1283, 1291, 1345, 1468
LweI GCATC 3 cut(s) 499, 826, 1104
MaeI CTAG 5 cut(s) 177, 194, 248, 440, 572
MaeII ACGT 2 cut(s) 693, 842
MaeIII GTNAC 5 cut(s) 12, 196, 661, 838, 1028
MalI GATC 6 cut(s) 648, 894, 953, 1286, 1407, 1587
MboI GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
MhlI GDGCHC 3 cut(s) 398, 1123, 1464
MlsI TGGCCA 2 cut(s) 65, 1601
MluCI AATT 3 cut(s) 107, 267, 1550
MluNI TGGCCA 2 cut(s) 65, 1601
MlyI GAGTC 5 cut(s) 598, 917, 1241, 1337, 1388
MmeI TCCRAC 1 cut(s) 436
Mox20I TGGCCA 2 cut(s) 65, 1601
MroXI GAANNNNTTC 1 cut(s) 800
MscI TGGCCA 2 cut(s) 65, 1601
MseI TTAA 1 cut(s) 270
MslI CAYNNNNRTG 3 cut(s) 561, 822, 1469
Msp20I TGGCCA 2 cut(s) 65, 1601
MspA1I CMGCKG 5 cut(s) 289, 761, 976, 1282, 1418
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 5 cut(s) 539, 900, 1199, 1400, 1538
MvnI CGCG 4 cut(s) 116, 1139, 1289, 1418
MwoI GCNNNNNNNGC 6 cut(s) 445, 970, 1021, 1145, 1265, 1367
NciI CCSGG 9 cut(s) 18, 361, 362, 478, 715, 854, 1055, 1102, 1103
NcoI CCATGG 1 cut(s) 1213
NdeII GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
NlaIII CATG 7 cut(s) 70, 208, 1024, 1114, 1217, 1380, 1507
NmuCI GTSAC 4 cut(s) 12, 661, 838, 1028
NspI RCATGY 1 cut(s) 208
PagI TCATGA 1 cut(s) 1503
PciSI GCTCTTC 1 cut(s) 1452
PcsI WCGNNNNNNNCGW 1 cut(s) 996
PctI GAATGC 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 800
PfeI GAWTC 3 cut(s) 405, 1087, 1106
PinAI ACCGGT 2 cut(s) 293, 1631
PleI GAGTC 5 cut(s) 597, 916, 1241, 1337, 1388
PpsI GAGTC 5 cut(s) 597, 916, 1241, 1337, 1388
PpuMI RGGWCCY 2 cut(s) 127, 1620
PshAI GACNNNNGTC 1 cut(s) 907
Psp124BI GAGCTC 2 cut(s) 398, 1464
Psp5II RGGWCCY 2 cut(s) 127, 1620
Psp6I CCWGG 5 cut(s) 537, 898, 1197, 1398, 1536
PspEI GGTNACC 1 cut(s) 1028
PspFI CCCAGC 2 cut(s) 251, 761
PspGI CCWGG 5 cut(s) 537, 898, 1197, 1398, 1536
PspPI GGNCC 8 cut(s) 127, 316, 535, 733, 902, 1017, 1062, 1620
PspPPI RGGWCCY 2 cut(s) 127, 1620
PstI CTGCAG 1 cut(s) 1363
PvuII CAGCTG 3 cut(s) 289, 976, 1282
RseI CAYNNNNRTG 3 cut(s) 561, 822, 1469
SacI GAGCTC 2 cut(s) 398, 1464
SacII CCGCGG 1 cut(s) 1419
SalI GTCGAC 1 cut(s) 566
SapI GCTCTTC 1 cut(s) 1452
SaqAI TTAA 1 cut(s) 270
Sau3AI GATC 6 cut(s) 646, 892, 951, 1284, 1405, 1585
Sau96I GGNCC 8 cut(s) 127, 316, 535, 733, 902, 1017, 1062, 1620
SchI GAGTC 5 cut(s) 598, 917, 1241, 1337, 1388
SduI GDGCHC 3 cut(s) 398, 1123, 1464
SfaNI GCATC 3 cut(s) 499, 826, 1104
SfcI CTRYAG 1 cut(s) 1359
Sfr303I CCGCGG 1 cut(s) 1419
SgrBI CCGCGG 1 cut(s) 1419
SinI GGWCC 7 cut(s) 127, 316, 733, 902, 1017, 1062, 1620
SmaI CCCGGG 2 cut(s) 362, 1103
SmiMI CAYNNNNRTG 3 cut(s) 561, 822, 1469
SmlI CTYRAG 4 cut(s) 136, 1295, 1485, 1568
SmoI CTYRAG 4 cut(s) 136, 1295, 1485, 1568
SpeI ACTAGT 1 cut(s) 193
Sse9I AATT 3 cut(s) 107, 267, 1550
SspI AATATT 1 cut(s) 801
SspMI CTAG 5 cut(s) 177, 194, 248, 440, 572
SstI GAGCTC 2 cut(s) 398, 1464
StyI CCWWGG 3 cut(s) 571, 1065, 1213
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 2 cut(s) 696, 845
TaqI TCGA 4 cut(s) 215, 561, 567, 820
TasI AATT 3 cut(s) 107, 267, 1550
TatI WGTACW 2 cut(s) 132, 1443
TauI GCSGC 3 cut(s) 176, 1271, 1529
TfiI GAWTC 3 cut(s) 405, 1087, 1106
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TseFI GTSAC 4 cut(s) 12, 661, 838, 1028
TseI GCWGC 7 cut(s) 286, 676, 973, 1271, 1279, 1358, 1481
Tsp45I GTSAC 4 cut(s) 12, 661, 838, 1028
TspDTI ATGAA 4 cut(s) 397, 536, 1017, 1520
TspGWI ACGGA 1 cut(s) 586
TspMI CCCGGG 2 cut(s) 360, 1101
VpaK11BI GGWCC 7 cut(s) 127, 316, 733, 902, 1017, 1062, 1620
XapI RAATTY 2 cut(s) 107, 1550
XceI RCATGY 1 cut(s) 208
XcmI CCANNNNNNNNNTGG 1 cut(s) 1631
XmaI CCCGGG 2 cut(s) 360, 1101
XmaJI CCTAGG 1 cut(s) 571
XmiI GTMKAC 2 cut(s) 567, 845
XmnI GAANNNNTTC 1 cut(s) 800
XspI CTAG 5 cut(s) 177, 194, 248, 440, 572
ZraI GACGTC 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.