Rmu_sc0003079.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003079.1
OG0000087
Physical Location & Seq
Forward (+)
8 .. 571
564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003079.1_g000001.1.cds

Sequence Viewer

Length: 564 bp
atggttttggttttgtatgaacttctgggtatttatgggttttggcttgaatttatgggttttggcttgaattttcgggttcttgttaggctaacccttgtgcttctggttccagatatagcaagatttgaggttcccggtaccgtagttaggatggaatcagaagccaagggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgaccggtacttaggccgagtagatcaattagcagagaacacggggtcctcgactggggtgttctcgaagagtagtgaggagttagacgagggtgagagcgagggtggatctgcggaggccccggtagtcacagtggccattcccgagggcattctgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacatgagactaaggtgggggataccggacgcggtggagcttaggcctctcagggatggagagatggccgcgaatcctgcctctgggtgggtggcgttgcactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

187

Amino Acids

20.39

Weight (kDa)

4.53

Isoelectric Point (pI)

31.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 140
AccB1I GGYRCC 1 cut(s) 140
AccI GTMKAC 1 cut(s) 395
AccII CGCG 2 cut(s) 491, 530
AciI CCGC 4 cut(s) 341, 404, 491, 528
AclWI GGATC 2 cut(s) 193, 343
AcoI YGGCCR 2 cut(s) 363, 525
AcsI RAATTY 2 cut(s) 50, 70
AcuI CTGAAG 2 cut(s) 237, 404
AfaI GTAC 3 cut(s) 142, 194, 236
AfiI CCNNNNNNNGG 5 cut(s) 150, 174, 282, 542, 546
AgeI ACCGGT 1 cut(s) 231
AgsI TTSAA 2 cut(s) 50, 70
AjnI CCWGG 1 cut(s) 206
AloI GAACNNNNNNTCC 2 cut(s) 257, 289
AluBI AGCT 2 cut(s) 215, 499
AluI AGCT 2 cut(s) 215, 499
Alw26I GTCTC 1 cut(s) 460
AlwI GGATC 2 cut(s) 193, 343
Ama87I CYCGRG 2 cut(s) 371, 428
AoxI GGCC 5 cut(s) 241, 345, 363, 503, 525
ApoI RAATTY 2 cut(s) 50, 70
AsiGI ACCGGT 1 cut(s) 231
Asp718I GGTACC 1 cut(s) 140
AspS9I GGNCC 3 cut(s) 273, 346, 411
AsuC2I CCSGG 4 cut(s) 138, 350, 429, 430
AsuHPI GGTGA 1 cut(s) 332
AvaI CYCGRG 2 cut(s) 371, 428
AvaII GGWCC 2 cut(s) 273, 411
BaeI ACNNNNGTAYC 2 cut(s) 132, 165
BalI TGGCCA 1 cut(s) 365
BanI GGYRCC 1 cut(s) 140
BbsI GAAGAC 1 cut(s) 192
BccI CCATC 4 cut(s) 148, 401, 509, 517
BciT130I CCWGG 1 cut(s) 208
BciVI GTATCC 2 cut(s) 172, 474
BcnI CCSGG 4 cut(s) 138, 350, 429, 430
BcoDI GTCTC 1 cut(s) 460
BfaI CTAG 1 cut(s) 562
BfuI GTATCC 2 cut(s) 172, 474
BisI GCNGC 1 cut(s) 528
BlsI GCNGC 1 cut(s) 529
Bme1390I CCNGG 5 cut(s) 138, 208, 350, 429, 430
Bme18I GGWCC 2 cut(s) 273, 411
BmeT110I CYCGRG 2 cut(s) 371, 428
BmgT120I GGNCC 3 cut(s) 273, 346, 411
BmiI GGNNCC 6 cut(s) 111, 135, 142, 274, 348, 412
BmrFI CCNGG 5 cut(s) 138, 208, 350, 429, 430
BmrI ACTGGG 1 cut(s) 291
BmuI ACTGGG 1 cut(s) 291
BpiI GAAGAC 1 cut(s) 192
Bpu10I CCTNAGC 1 cut(s) 500
BpuMI CCSGG 4 cut(s) 138, 350, 429, 430
BsaJI CCNNGG 5 cut(s) 168, 348, 372, 389, 428
BsaWI WCCGGW 2 cut(s) 231, 484
Bsc4I CCNNNNNNNGG 5 cut(s) 150, 174, 282, 542, 546
Bse118I RCCGGY 1 cut(s) 231
Bse1I ACTGG 2 cut(s) 196, 286
BseBI CCWGG 1 cut(s) 208
BseDI CCNNGG 5 cut(s) 168, 348, 372, 389, 428
BseGI GGATG 3 cut(s) 159, 412, 520
BseLI CCNNNNNNNGG 5 cut(s) 150, 174, 282, 542, 546
BseMII CTCAG 1 cut(s) 523
BseNI ACTGG 2 cut(s) 196, 286
BseRI GAGGAG 1 cut(s) 320
Bsh1236I CGCG 2 cut(s) 491, 530
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 5 cut(s) 243, 347, 365, 505, 527
BshNI GGYRCC 1 cut(s) 140
BshTI ACCGGT 1 cut(s) 231
BsiEI CGRYCG 1 cut(s) 232
BsiHKCI CYCGRG 2 cut(s) 371, 428
BsiSI CCGG 5 cut(s) 138, 232, 350, 429, 485
BslFI GGGAC 1 cut(s) 424
BslI CCNNNNNNNGG 5 cut(s) 150, 174, 282, 542, 546
BsmAI GTCTC 1 cut(s) 460
BsmFI GGGAC 1 cut(s) 424
BsmI GAATGC 1 cut(s) 378
BsnI GGCC 5 cut(s) 243, 347, 365, 505, 527
BsoBI CYCGRG 2 cut(s) 371, 428
Bsp143I GATC 4 cut(s) 185, 250, 335, 453
BspACI CCGC 4 cut(s) 341, 404, 491, 528
BspANI GGCC 5 cut(s) 243, 347, 365, 505, 527
BspCNI CTCAG 1 cut(s) 522
BspFNI CGCG 2 cut(s) 491, 530
BspLI GGNNCC 6 cut(s) 111, 135, 142, 274, 348, 412
BspPI GGATC 2 cut(s) 193, 343
BspT107I GGYRCC 1 cut(s) 140
BsrFI RCCGGY 1 cut(s) 231
BsrI ACTGG 2 cut(s) 196, 286
BssAI RCCGGY 1 cut(s) 231
BssECI CCNNGG 5 cut(s) 168, 348, 372, 389, 428
BssMI GATC 4 cut(s) 185, 250, 335, 453
BssNAI GTATAC 1 cut(s) 396
BssT1I CCWWGG 1 cut(s) 168
Bst1107I GTATAC 1 cut(s) 396
Bst2UI CCWGG 1 cut(s) 208
Bst4CI ACNGT 3 cut(s) 145, 361, 415
Bst6I CTCTTC 1 cut(s) 290
BstC8I GCNNGC 1 cut(s) 213
BstDEI CTNAG 4 cut(s) 238, 470, 500, 509
BstF5I GGATG 3 cut(s) 159, 412, 520
BstFNI CGCG 2 cut(s) 491, 530
BstKTI GATC 4 cut(s) 188, 253, 338, 456
BstMAI GTCTC 1 cut(s) 460
BstMBI GATC 4 cut(s) 185, 250, 335, 453
BstMCI CGRYCG 1 cut(s) 232
BstMWI GCNNNNNNNGC 2 cut(s) 212, 536
BstNI CCWGG 1 cut(s) 208
BstSCI CCNGG 5 cut(s) 136, 206, 348, 427, 428
BstUI CGCG 2 cut(s) 491, 530
BstV2I GAAGAC 1 cut(s) 192
BstX2I RGATCY 1 cut(s) 335
BstYI RGATCY 1 cut(s) 335
BstZ17I GTATAC 1 cut(s) 396
BsuI GTATCC 2 cut(s) 172, 474
BsuRI GGCC 5 cut(s) 243, 347, 365, 505, 527
BtsCI GGATG 3 cut(s) 159, 412, 520
BtsIMutI CAGTG 1 cut(s) 366
Cac8I GCNNGC 1 cut(s) 213
Cfr10I RCCGGY 1 cut(s) 231
Cfr13I GGNCC 3 cut(s) 273, 346, 411
Cfr9I CCCGGG 1 cut(s) 428
CseI GACGC 1 cut(s) 497
Csp6I GTAC 3 cut(s) 141, 193, 235
CspAI ACCGGT 1 cut(s) 231
CviAII CATG 1 cut(s) 463
CviQI GTAC 3 cut(s) 141, 193, 235
DdeI CTNAG 4 cut(s) 238, 470, 500, 509
DpnI GATC 4 cut(s) 187, 252, 337, 455
DpnII GATC 4 cut(s) 185, 250, 335, 453
EaeI YGGCCR 2 cut(s) 363, 525
Eam1104I CTCTTC 1 cut(s) 290
EarI CTCTTC 1 cut(s) 290
Eco130I CCWWGG 1 cut(s) 168
Eco147I AGGCCT 1 cut(s) 505
Eco32I GATATC 1 cut(s) 226
Eco47I GGWCC 2 cut(s) 273, 411
Eco57I CTGAAG 2 cut(s) 237, 404
Eco88I CYCGRG 2 cut(s) 371, 428
EcoO109I RGGNCCY 2 cut(s) 273, 346
EcoRII CCWGG 1 cut(s) 206
EcoRV GATATC 1 cut(s) 226
EcoT14I CCWWGG 1 cut(s) 168
ErhI CCWWGG 1 cut(s) 168
FaeI CATG 1 cut(s) 466
FaiI YATR 8 cut(s) 18, 36, 56, 119, 396, 418, 440, 464
FaqI GGGAC 1 cut(s) 424
FatI CATG 1 cut(s) 462
FblI GTMKAC 1 cut(s) 395
Fnu4HI GCNGC 1 cut(s) 528
FokI GGATG 3 cut(s) 166, 419, 527
Fsp4HI GCNGC 1 cut(s) 528
FspBI CTAG 1 cut(s) 562
GluI GCNGC 1 cut(s) 528
HaeIII GGCC 5 cut(s) 243, 347, 365, 505, 527
HapII CCGG 5 cut(s) 138, 232, 350, 429, 485
HgaI GACGC 1 cut(s) 497
Hin1II CATG 1 cut(s) 466
HinfI GANTC 2 cut(s) 158, 532
HpaII CCGG 5 cut(s) 138, 232, 350, 429, 485
HphI GGTGA 1 cut(s) 332
Hpy166II GTNNAC 1 cut(s) 396
Hpy188I TCNGA 2 cut(s) 163, 384
Hpy188III TCNNGA 3 cut(s) 113, 292, 371
Hpy8I GTNNAC 1 cut(s) 396
Hpy99I CGWCG 2 cut(s) 193, 425
HpyAV CCTTC 1 cut(s) 442
HpyCH4III ACNGT 3 cut(s) 145, 361, 415
HpyCH4V TGCA 1 cut(s) 559
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 536
HpyF3I CTNAG 4 cut(s) 238, 470, 500, 509
Hsp92II CATG 1 cut(s) 466
KpnI GGTACC 1 cut(s) 144
Kzo9I GATC 4 cut(s) 185, 250, 335, 453
LmnI GCTCC 1 cut(s) 496
MaeI CTAG 1 cut(s) 562
MaeIII GTNAC 1 cut(s) 355
MalI GATC 4 cut(s) 187, 252, 337, 455
MboI GATC 4 cut(s) 185, 250, 335, 453
MboII GAAGA 2 cut(s) 192, 307
MflI RGATCY 1 cut(s) 335
MlsI TGGCCA 1 cut(s) 365
MluCI AATT 3 cut(s) 50, 70, 254
MluNI TGGCCA 1 cut(s) 365
Mox20I TGGCCA 1 cut(s) 365
MscI TGGCCA 1 cut(s) 365
MslI CAYNNNNRTG 1 cut(s) 461
Msp20I TGGCCA 1 cut(s) 365
MspI CCGG 5 cut(s) 138, 232, 350, 429, 485
MspR9I CCNGG 5 cut(s) 138, 208, 350, 429, 430
Mva1269I GAATGC 1 cut(s) 378
MvaI CCWGG 1 cut(s) 208
MvnI CGCG 2 cut(s) 491, 530
MwoI GCNNNNNNNGC 2 cut(s) 212, 536
NciI CCSGG 4 cut(s) 138, 350, 429, 430
NdeII GATC 4 cut(s) 185, 250, 335, 453
NlaIII CATG 1 cut(s) 466
NlaIV GGNNCC 6 cut(s) 111, 135, 142, 274, 348, 412
NmeAIII GCCGAG 2 cut(s) 269, 414
NmuCI GTSAC 1 cut(s) 355
PceI AGGCCT 1 cut(s) 505
PcsI WCGNNNNNNNCGW 2 cut(s) 188, 275
PctI GAATGC 1 cut(s) 378
PfeI GAWTC 2 cut(s) 158, 532
PinAI ACCGGT 1 cut(s) 231
PkrI GCNGC 1 cut(s) 529
PpuMI RGGWCCY 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 273
Psp6I CCWGG 1 cut(s) 206
PspGI CCWGG 1 cut(s) 206
PspN4I GGNNCC 6 cut(s) 111, 135, 142, 274, 348, 412
PspPI GGNCC 3 cut(s) 273, 346, 411
PspPPI RGGWCCY 1 cut(s) 273
PsuI RGATCY 1 cut(s) 335
RsaI GTAC 3 cut(s) 142, 194, 236
RsaNI GTAC 3 cut(s) 141, 193, 235
RseI CAYNNNNRTG 1 cut(s) 461
SatI GCNGC 1 cut(s) 528
Sau3AI GATC 4 cut(s) 185, 250, 335, 453
Sau96I GGNCC 3 cut(s) 273, 346, 411
ScrFI CCNGG 5 cut(s) 138, 208, 350, 429, 430
SetI ASST 5 cut(s) 135, 217, 395, 476, 501
SinI GGWCC 2 cut(s) 273, 411
SmaI CCCGGG 1 cut(s) 430
SmiMI CAYNNNNRTG 1 cut(s) 461
Sse9I AATT 3 cut(s) 50, 70, 254
SseBI AGGCCT 1 cut(s) 505
SsiI CCGC 4 cut(s) 341, 404, 491, 528
SspMI CTAG 1 cut(s) 562
StuI AGGCCT 1 cut(s) 505
StyD4I CCNGG 5 cut(s) 136, 206, 348, 427, 428
StyI CCWWGG 1 cut(s) 168
TaaI ACNGT 3 cut(s) 145, 361, 415
TaqI TCGA 4 cut(s) 228, 278, 293, 459
TasI AATT 3 cut(s) 50, 70, 254
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 2 cut(s) 158, 532
TscAI CASTG 1 cut(s) 366
TseFI GTSAC 1 cut(s) 355
Tsp45I GTSAC 1 cut(s) 355
TspDTI ATGAA 2 cut(s) 33, 461
TspMI CCCGGG 1 cut(s) 428
TspRI CASTG 1 cut(s) 366
VpaK11BI GGWCC 2 cut(s) 273, 411
XapI RAATTY 2 cut(s) 50, 70
XmaI CCCGGG 1 cut(s) 428
XmiI GTMKAC 1 cut(s) 395
XspI CTAG 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.