Rmu_sc0005629.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005629.1
OG0000087
Physical Location & Seq
Forward (+)
26410 .. 29766
3357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005629.1_g000006.1.cds

Sequence Viewer

Length: 1935 bp
atgcctcagggcatcacctcgagctaccctttaatgcctcagcggcaccgccaggctttcgcgctcgtgcctcagcggcaccaccacgacatcccgctcatgccttcccgacacccccgagcttccgctcatgcctcccaggcaactcacgagcttaccgctcatgccttcggtgcaccccgagcttccgctcatgcctcccaggcaactcacgagcttaccgctcatgccttcggtgcaccccgagcttcggctcatgcctccccggcaaccccgagcttccgctcacgagcttaccgctcatgccttcgcggcacccttgagcttccgctcatgccttctcggcaaccctggagcttccgctcacgagcttcccgctcatgccttcccggcaccccgagcttcccgctcatgccttcccggcacccccgagcttccgctcatgccttcccggcacccccgagcttccgctcatgcctccccggcaactcacgagcttaccgctcatgccttcgcggcaccccgagcttccgctcacgagcttccgctcatgcctcccaggcaaccccgagcttccgctcacgagcttaccgctcatgccttcgcggcacccttgagcttccactcatgccttcccggcaccacgagcttccgctcatgccttcccggcaccacgagcttcccgctcatgccttcccggcaccccgagcttcccgctcatgccttccctgcaacccacgagcttccctctcctgccttcccggcaccccgagcttcccgctcatgccttcccggcaacctacgagcttcccgctcatgccttcccggcaccccgagtttcccgctcacgagctttccgctcatgtctactcgacacaccacacgctagggttagggtggctccccgttaaagcgccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccagggagaagatgccctgcacatcgacgtcgacctaaggtcgaaaggtacgagtcggtctattgaagagacccttctggagatcaccgatgaggaatacggtgaacctgaccccgatgctcccgtgacccacgtcgcgcagccctccctggccgatgttatcacaatagatgacaccggaatgggaaaagtaccggtcccagtgcctattacctctcgttccactgggagcgatgagggtactggtgcgaagaggcagaagaaagatcacccgagatcagagtcgtcgccttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaagataatactccccaggagaatcgccgtctcgcccgggaatcaatgatgcaggcactcttcaatgtgtacgccattgatgccagcgaggaagatactcatctgaaggaggaggttagaaacctctccaggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggaacttgaaggtgaggagaaggcagaccatctggaggatcgccgtcccacggagaggcacgaggcagtggaggagtacaagtcctcggatgagctcatatctatgttggctgctgcccaagataaggctgtcatcatgaagtttaaggagtgggtggcggacgggtatttagatgaggccaaattcaggcggggtctcctggagataaagaagaaggatcgggaagcggcggccaagtctggtgccggtggatctcagagtaccggaggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

644

Amino Acids

71.3

Weight (kDa)

9.32

Isoelectric Point (pI)

68.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1552
AatII GACGTC 1 cut(s) 1020
Acc36I ACCTGC 1 cut(s) 1552
AccB7I CCANNNNNTGG 1 cut(s) 973
AccI GTMKAC 2 cut(s) 867, 1020
AccII CGCG 5 cut(s) 62, 312, 516, 606, 1127
AclWI GGATC 4 cut(s) 1401, 1698, 1878, 1912
AcoI YGGCCR 3 cut(s) 1140, 1629, 1884
AcsI RAATTY 1 cut(s) 1835
AcuI CTGAAG 2 cut(s) 1418, 1553
AcyI GRCGYC 1 cut(s) 1017
AfaI GTAC 7 cut(s) 1039, 1182, 1231, 1352, 1499, 1730, 1915
AgeI ACCGGT 1 cut(s) 1183
AgsI TTSAA 3 cut(s) 1055, 1492, 1661
AhdI GACNNNNNGTC 1 cut(s) 1027
AjiI CACGTC 1 cut(s) 1123
Alw21I GWGCWC 3 cut(s) 178, 241, 1749
Alw26I GTCTC 3 cut(s) 1052, 1463, 1853
Alw44I GTGCAC 2 cut(s) 174, 237
AlwI GGATC 4 cut(s) 1401, 1698, 1878, 1912
AlwNI CAGNNNCTG 1 cut(s) 1342
AoxI GGCC 8 cut(s) 988, 1140, 1288, 1425, 1587, 1629, 1830, 1884
ApaLI GTGCAC 2 cut(s) 174, 237
ApeKI GCWGC 6 cut(s) 1129, 1336, 1339, 1642, 1763, 1766
ApoI RAATTY 1 cut(s) 1835
AsiGI ACCGGT 1 cut(s) 1183
AspLEI GCGC 3 cut(s) 64, 916, 1129
AspS9I GGNCC 4 cut(s) 988, 1186, 1380, 1425
AsuHPI GGTGA 6 cut(s) 7, 1066, 1103, 1250, 1576, 1676
AvaII GGWCC 2 cut(s) 1186, 1380
AxyI CCTNAGG 2 cut(s) 6, 1025
BaeGI GKGCMC 2 cut(s) 178, 241
BanII GRGCYC 1 cut(s) 1749
Bbv12I GWGCWC 3 cut(s) 178, 241, 1749
BbvCI CCTCAGC 2 cut(s) 39, 72
BbvI GCAGC 6 cut(s) 1141, 1326, 1348, 1654, 1750, 1753
BccI CCATC 6 cut(s) 949, 967, 979, 1337, 1621, 1689
BceAI ACGGC 2 cut(s) 1440, 1680
BcoDI GTCTC 3 cut(s) 1052, 1463, 1853
BfaI CTAG 1 cut(s) 887
BfoI RGCGCY 1 cut(s) 917
BfuAI ACCTGC 1 cut(s) 1552
Bme18I GGWCC 2 cut(s) 1186, 1380
BmeRI GACNNNNNGTC 1 cut(s) 1027
BmgBI CACGTC 1 cut(s) 1123
BmgT120I GGNCC 4 cut(s) 988, 1186, 1380, 1425
BmrI ACTGGG 2 cut(s) 1184, 1224
BmsI GCATC 6 cut(s) 21, 952, 991, 1096, 1467, 1498
BmuI ACTGGG 2 cut(s) 1184, 1224
BoxI GACNNNNGTC 1 cut(s) 1121
BplI GAGNNNNNCTC 4 cut(s) 732, 764, 1595, 1627
BpmI CTGGAG 6 cut(s) 373, 1088, 1540, 1616, 1706, 1874
Bpu10I CCTNAGC 2 cut(s) 39, 72
BpuEI CTTGAG 2 cut(s) 341, 635
BsaBI GATNNNNATC 1 cut(s) 1527
BsaHI GRCGYC 1 cut(s) 1017
BsaI GGTCTC 2 cut(s) 1052, 1853
BsaWI WCCGGW 4 cut(s) 1166, 1183, 1309, 1916
BsaXI ACNNNNNCTCC 2 cut(s) 1718, 1748
Bse118I RCCGGY 2 cut(s) 1183, 1898
Bse1I ACTGG 3 cut(s) 1190, 1219, 1237
Bse21I CCTNAGG 2 cut(s) 6, 1025
Bse8I GATNNNNATC 1 cut(s) 1527
BseGI GGATG 4 cut(s) 90, 960, 964, 1747
BseJI GATNNNNATC 1 cut(s) 1527
BseMII CTCAG 6 cut(s) 20, 53, 86, 1334, 1614, 1922
BseNI ACTGG 3 cut(s) 1190, 1219, 1237
BseRI GAGGAG 4 cut(s) 959, 1553, 1682, 1739
BseSI GKGCMC 2 cut(s) 178, 241
BseXI GCAGC 6 cut(s) 1141, 1326, 1348, 1654, 1750, 1753
BsgI GTGCAG 1 cut(s) 992
Bsh1236I CGCG 5 cut(s) 62, 312, 516, 606, 1127
Bsh1285I CGRYCG 2 cut(s) 1417, 1927
BshFI GGCC 8 cut(s) 990, 1142, 1290, 1427, 1589, 1631, 1832, 1886
BshTI ACCGGT 1 cut(s) 1183
BsiEI CGRYCG 2 cut(s) 1417, 1927
BsiHKAI GWGCWC 3 cut(s) 178, 241, 1749
BslFI GGGAC 3 cut(s) 1172, 1622, 1683
BsmAI GTCTC 3 cut(s) 1052, 1463, 1853
BsmBI CGTCTC 1 cut(s) 1463
BsmFI GGGAC 3 cut(s) 1172, 1622, 1683
BsnI GGCC 8 cut(s) 990, 1142, 1290, 1427, 1589, 1631, 1832, 1886
Bso31I GGTCTC 2 cut(s) 1052, 1853
Bsp1286I GDGCHC 3 cut(s) 178, 241, 1749
Bsp143I GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
BspANI GGCC 8 cut(s) 990, 1142, 1290, 1427, 1589, 1631, 1832, 1886
BspCNI CTCAG 6 cut(s) 19, 52, 85, 1335, 1615, 1921
BspFNI CGCG 5 cut(s) 62, 312, 516, 606, 1127
BspHI TCATGA 1 cut(s) 1788
BspMI ACCTGC 1 cut(s) 1552
BspPI GGATC 4 cut(s) 1401, 1698, 1878, 1912
BspTNI GGTCTC 2 cut(s) 1052, 1853
BsrFI RCCGGY 2 cut(s) 1183, 1898
BsrI ACTGG 3 cut(s) 1190, 1219, 1237
BssAI RCCGGY 2 cut(s) 1183, 1898
BssMI GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
BssNI GRCGYC 1 cut(s) 1017
Bst4CI ACNGT 1 cut(s) 1091
Bst6I CTCTTC 4 cut(s) 914, 1050, 1235, 1493
BstACI GRCGYC 1 cut(s) 1017
BstC8I GCNNGC 2 cut(s) 1482, 1513
BstDEI CTNAG 8 cut(s) 6, 39, 72, 1025, 1343, 1623, 1638, 1908
BstDSI CCRYGG 1 cut(s) 1701
BstF5I GGATG 4 cut(s) 90, 960, 964, 1747
BstFNI CGCG 5 cut(s) 62, 312, 516, 606, 1127
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 3 cut(s) 64, 916, 1129
BstKTI GATC 8 cut(s) 1074, 1258, 1268, 1396, 1693, 1873, 1907, 1927
BstMAI GTCTC 3 cut(s) 1052, 1463, 1853
BstMBI GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
BstMCI CGRYCG 2 cut(s) 1417, 1927
BstNSI RCATGY 1 cut(s) 982
BstPAI GACNNNNGTC 1 cut(s) 1121
BstSLI GKGCMC 2 cut(s) 178, 241
BstUI CGCG 5 cut(s) 62, 312, 516, 606, 1127
BstV1I GCAGC 6 cut(s) 1141, 1326, 1348, 1654, 1750, 1753
BstX2I RGATCY 2 cut(s) 1393, 1904
BstYI RGATCY 2 cut(s) 1393, 1904
Bsu36I CCTNAGG 2 cut(s) 6, 1025
BsuRI GGCC 8 cut(s) 990, 1142, 1290, 1427, 1589, 1631, 1832, 1886
BtgI CCRYGG 1 cut(s) 1701
BtgZI GCGATG 1 cut(s) 1236
BtrI CACGTC 1 cut(s) 1123
BtsCI GGATG 4 cut(s) 90, 960, 964, 1747
BtsI GCAGTG 1 cut(s) 1725
BtsIMutI CAGTG 3 cut(s) 1197, 1212, 1725
BveI ACCTGC 1 cut(s) 1552
Cac8I GCNNGC 2 cut(s) 1482, 1513
CaiI CAGNNNCTG 1 cut(s) 1342
CciI TCATGA 1 cut(s) 1788
CfoI GCGC 3 cut(s) 64, 916, 1129
Cfr10I RCCGGY 2 cut(s) 1183, 1898
Cfr13I GGNCC 4 cut(s) 988, 1186, 1380, 1425
Cfr9I CCCGGG 1 cut(s) 1464
Csp6I GTAC 7 cut(s) 1038, 1181, 1230, 1351, 1498, 1729, 1914
CspAI ACCGGT 1 cut(s) 1183
CviQI GTAC 7 cut(s) 1038, 1181, 1230, 1351, 1498, 1729, 1914
DdeI CTNAG 8 cut(s) 6, 39, 72, 1025, 1343, 1623, 1638, 1908
DpnI GATC 8 cut(s) 1073, 1257, 1267, 1395, 1692, 1872, 1906, 1926
DpnII GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
DriI GACNNNNNGTC 1 cut(s) 1027
EaeI YGGCCR 3 cut(s) 1140, 1629, 1884
Eam1104I CTCTTC 4 cut(s) 914, 1050, 1235, 1493
Eam1105I GACNNNNNGTC 1 cut(s) 1027
EarI CTCTTC 4 cut(s) 914, 1050, 1235, 1493
EciI GGCGGA 1 cut(s) 1826
Ecl136II GAGCTC 1 cut(s) 1747
Eco24I GRGCYC 1 cut(s) 1749
Eco31I GGTCTC 2 cut(s) 1052, 1853
Eco47I GGWCC 2 cut(s) 1186, 1380
Eco53kI GAGCTC 1 cut(s) 1747
Eco57I CTGAAG 2 cut(s) 1418, 1553
Eco81I CCTNAGG 2 cut(s) 6, 1025
EcoICRI GAGCTC 1 cut(s) 1747
EcoT38I GRGCYC 1 cut(s) 1749
Esp3I CGTCTC 1 cut(s) 1463
FalI AAGNNNNNCTT 2 cut(s) 1047, 1079
FaqI GGGAC 3 cut(s) 1172, 1622, 1683
FblI GTMKAC 2 cut(s) 867, 1020
FokI GGATG 4 cut(s) 77, 967, 971, 1754
FriOI GRGCYC 1 cut(s) 1749
FspBI CTAG 1 cut(s) 887
GlaI GCGC 3 cut(s) 63, 915, 1128
GsuI CTGGAG 6 cut(s) 373, 1088, 1540, 1616, 1706, 1874
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 8 cut(s) 990, 1142, 1290, 1427, 1589, 1631, 1832, 1886
HhaI GCGC 3 cut(s) 64, 916, 1129
Hin1I GRCGYC 1 cut(s) 1017
Hin6I GCGC 3 cut(s) 62, 914, 1127
HinP1I GCGC 3 cut(s) 62, 914, 1127
HincII GTYRAC 1 cut(s) 1021
HindII GTYRAC 1 cut(s) 1021
HinfI GANTC 5 cut(s) 1042, 1271, 1450, 1469, 1610
HphI GGTGA 6 cut(s) 7, 1066, 1103, 1250, 1576, 1676
Hpy166II GTNNAC 6 cut(s) 176, 239, 868, 1021, 1094, 1498
Hpy188I TCNGA 5 cut(s) 1270, 1398, 1533, 1741, 1911
Hpy8I GTNNAC 6 cut(s) 176, 239, 868, 1021, 1094, 1498
Hpy99I CGWCG 4 cut(s) 1019, 1022, 1127, 1279
HpyCH4III ACNGT 1 cut(s) 1091
HpyCH4IV ACGT 2 cut(s) 1017, 1122
HpyCH4V TGCA 5 cut(s) 176, 239, 732, 1009, 1480
HpyF3I CTNAG 8 cut(s) 6, 39, 72, 1025, 1343, 1623, 1638, 1908
HpySE526I ACGT 2 cut(s) 1017, 1122
Hsp92I GRCGYC 1 cut(s) 1017
HspAI GCGC 3 cut(s) 62, 914, 1127
Kzo9I GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
LmnI GCTCC 5 cut(s) 354, 906, 1114, 1218, 1603
Lsp1109I GCAGC 6 cut(s) 1141, 1326, 1348, 1654, 1750, 1753
LweI GCATC 6 cut(s) 21, 952, 991, 1096, 1467, 1498
MaeI CTAG 1 cut(s) 887
MaeII ACGT 2 cut(s) 1017, 1122
MaeIII GTNAC 1 cut(s) 1114
MalI GATC 8 cut(s) 1073, 1257, 1267, 1395, 1692, 1872, 1906, 1926
MboI GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
MboII GAAGA 9 cut(s) 931, 1010, 1067, 1252, 1261, 1480, 1532, 1565, 1876
MflI RGATCY 2 cut(s) 1393, 1904
MhlI GDGCHC 3 cut(s) 178, 241, 1749
MluCI AATT 1 cut(s) 1835
MlyI GAGTC 3 cut(s) 1051, 1280, 1604
MseI TTAA 3 cut(s) 32, 909, 1797
MslI CAYNNNNRTG 3 cut(s) 983, 1169, 1754
MspA1I CMGCKG 4 cut(s) 43, 76, 1339, 1645
MvnI CGCG 5 cut(s) 62, 312, 516, 606, 1127
NdeII GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
NmeAIII GCCGAG 1 cut(s) 322
NmuCI GTSAC 1 cut(s) 1114
NspI RCATGY 1 cut(s) 982
PaeR7I CTCGAG 1 cut(s) 19
PagI TCATGA 1 cut(s) 1788
PaqCI CACCTGC 1 cut(s) 1552
PcsI WCGNNNNNNNCGW 2 cut(s) 1037, 1359
PfeI GAWTC 2 cut(s) 1450, 1469
PflMI CCANNNNNTGG 1 cut(s) 973
PfoI TCCNGGA 1 cut(s) 1851
PinAI ACCGGT 1 cut(s) 1183
Ple19I CGATCG 1 cut(s) 1927
PleI GAGTC 3 cut(s) 1050, 1279, 1604
PpsI GAGTC 3 cut(s) 1050, 1279, 1604
PshAI GACNNNNGTC 1 cut(s) 1121
Psp124BI GAGCTC 1 cut(s) 1749
PspPI GGNCC 4 cut(s) 988, 1186, 1380, 1425
PspXI VCTCGAGB 1 cut(s) 19
PstNI CAGNNNCTG 1 cut(s) 1342
PsuI RGATCY 2 cut(s) 1393, 1904
PvuI CGATCG 1 cut(s) 1927
PvuII CAGCTG 1 cut(s) 1339
RsaI GTAC 7 cut(s) 1039, 1182, 1231, 1352, 1499, 1730, 1915
RsaNI GTAC 7 cut(s) 1038, 1181, 1230, 1351, 1498, 1729, 1914
RseI CAYNNNNRTG 3 cut(s) 983, 1169, 1754
SacI GAGCTC 1 cut(s) 1749
SalI GTCGAC 1 cut(s) 1019
SaqAI TTAA 3 cut(s) 32, 909, 1797
Sau3AI GATC 8 cut(s) 1071, 1255, 1265, 1393, 1690, 1870, 1904, 1924
Sau96I GGNCC 4 cut(s) 988, 1186, 1380, 1425
SchI GAGTC 3 cut(s) 1051, 1280, 1604
SduI GDGCHC 3 cut(s) 178, 241, 1749
SfaNI GCATC 6 cut(s) 21, 952, 991, 1096, 1467, 1498
Sfr274I CTCGAG 1 cut(s) 19
SinI GGWCC 2 cut(s) 1186, 1380
SlaI CTCGAG 1 cut(s) 19
SmaI CCCGGG 1 cut(s) 1466
SmiMI CAYNNNNRTG 3 cut(s) 983, 1169, 1754
SmlI CTYRAG 3 cut(s) 19, 320, 614
SmoI CTYRAG 3 cut(s) 19, 320, 614
Sse9I AATT 1 cut(s) 1835
SspMI CTAG 1 cut(s) 887
SstI GAGCTC 1 cut(s) 1749
TaaI ACNGT 1 cut(s) 1091
TaiI ACGT 2 cut(s) 1020, 1125
TaqI TCGA 6 cut(s) 20, 872, 1014, 1020, 1031, 1413
TaqII GACCGA 1 cut(s) 1035
TasI AATT 1 cut(s) 1835
TatI WGTACW 1 cut(s) 1728
TauI GCSGC 8 cut(s) 46, 79, 315, 519, 609, 1634, 1883, 1886
TfiI GAWTC 2 cut(s) 1450, 1469
Tru1I TTAA 3 cut(s) 32, 909, 1797
Tru9I TTAA 3 cut(s) 32, 909, 1797
TscAI CASTG 3 cut(s) 1197, 1219, 1725
TseFI GTSAC 1 cut(s) 1114
TseI GCWGC 6 cut(s) 1129, 1336, 1339, 1642, 1763, 1766
Tsp45I GTSAC 1 cut(s) 1114
TspDTI ATGAA 3 cut(s) 1380, 1565, 1805
TspGWI ACGGA 1 cut(s) 1718
TspMI CCCGGG 1 cut(s) 1464
TspRI CASTG 3 cut(s) 1197, 1219, 1725
Van91I CCANNNNNTGG 1 cut(s) 973
VneI GTGCAC 2 cut(s) 174, 237
VpaK11BI GGWCC 2 cut(s) 1186, 1380
XapI RAATTY 1 cut(s) 1835
XceI RCATGY 1 cut(s) 982
XhoI CTCGAG 1 cut(s) 19
XmaI CCCGGG 1 cut(s) 1464
XmiI GTMKAC 2 cut(s) 867, 1020
XspI CTAG 1 cut(s) 887
ZraI GACGTC 1 cut(s) 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.