Rmu_sc0001393.1_g000026

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001393.1
OG0000087
Physical Location & Seq
Reverse (-)
99049 .. 101023
1975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001393.1_g000026.1.cds

Sequence Viewer

Length: 1710 bp
atgaaggagataatcgatttgcgactgaagtggggaataccggatgcgatggagcttaggcctctcagggatggagagatggccgtgaatcctgcctcggggtgggtggtgttgcacgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtacctgctgcggatgctgaacctgtcaccggggcagctgaccccgaacgccattcaccaagtatacagtatgatggccatgtgggacttgtgccaacaagggtggccctctataaatgaattccgcgcggtacaccgggtactgtactcgaggaagcagtcctgtgcgggtacggttacatttgccgctagggactacgaaccactagttaccgacatgccctcttcgatgagcaaaaggtggaggaacaaggtattcctagctgggggacgatggcaaattaaaaataggaagtggcttctgactggtaccttccaagcaatcgggctagggctagggtggctccccgtgaaagcgctgaagaggaaaccccggaaaggcaaagaggaggacagaatggatgatgcgaagttgatggatatgctgatgggccagggggaagacgcccttcacatcgatgtcgacctagggttgaaaggtacaagtcggtcagttgaagaaacccttctggagatcaccgatgagggatatggtgaacccgatcccgacgctcccgtgacccacgtcgtgcagccctctatggccgacgttatcacgatagatgacaccgggacaggaaaggtactggccccagtgcctatttcctctcgctcgactgggagcgacgaggcattgctgcccggtgagaagaagagatcccataggcaccgacatcgaagtgataaggaggtgacgtatactagccgggatgttcagggttttggtgagaagaggcagaagaagaatcacccgggaccggagtcgtcgccatcgcttggcctgttatctcctgcagttccggtaatccccaagaagcccatcaagcagctgttgagtgagtacggagttgccgatgaaaagttcgtgcggtccatgcttggtgacctgaaggatattgaccttgaccgggttctggtcaaagacaatacgccccaagagaatcgccgtcttgcccgggaatccatgatgcgggcactcttcaatgtgtacgctattgacgccagcgaggaagatactcatctgaaggaggaggttagtaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctagagaaggagcgggactcattgaaggctgagatggccggcgccaagcagcggatcacggagctggagggtgaagtctccgaggcgcgggaagaggtgaagaacgctcgggactctgagaaaaaagccgcagagtctgccatcttatggaaggagaaagcagaccacctagaggatcgccttcccacagaaaggcacgaggccgtggaggagtacaagtcatccgaagagctcatcgctatgctcactactgcccaagataaagctgttattatgaagtttaaggagtgggtggcggccgggtatttagatgaagctaaattcaggcggggtctcctggagaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccggtgggtcccagagtaccggtggcaagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

569

Amino Acids

63.94

Weight (kDa)

8.13

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1249
Acc36I ACCTGC 2 cut(s) 180, 1249
Acc65I GGTACC 1 cut(s) 476
AccB1I GGYRCC 5 cut(s) 159, 476, 873, 1331, 1670
AccB7I CCANNNNNTGG 2 cut(s) 983, 1437
AccBSI CCGCTC 1 cut(s) 1303
AccI GTMKAC 3 cut(s) 231, 630, 905
AccII CGCG 3 cut(s) 294, 296, 1378
AclWI GGATC 4 cut(s) 704, 858, 1352, 1473
AcoI YGGCCR 5 cut(s) 81, 243, 750, 1326, 1587
AcsI RAATTY 2 cut(s) 287, 1610
AcuI CTGAAG 4 cut(s) 47, 548, 1115, 1250
AcyI GRCGYC 3 cut(s) 612, 1206, 1332
AdeI CACNNNGTG 1 cut(s) 736
AfeI AGCGCT 1 cut(s) 525
AgeI ACCGGT 1 cut(s) 1691
AgsI TTSAA 4 cut(s) 643, 665, 1189, 1315
AhlI ACTAGT 1 cut(s) 373
AjiI CACGTC 1 cut(s) 733
AjnI CCWGG 2 cut(s) 600, 1626
Alw21I GWGCWC 1 cut(s) 1524
Alw26I GTCTC 2 cut(s) 1372, 1628
AlwI GGATC 4 cut(s) 704, 858, 1352, 1473
AlwNI CAGNNNCTG 2 cut(s) 172, 1427
Ama87I CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
Aor51HI AGCGCT 1 cut(s) 525
ApeKI GCWGC 7 cut(s) 151, 175, 202, 739, 844, 1033, 1339
ApoI RAATTY 2 cut(s) 287, 1610
AsiGI ACCGGT 1 cut(s) 1691
Asp700I GAANNNNTTC 1 cut(s) 672
Asp718I GGTACC 1 cut(s) 476
AspA2I CCTAGG 1 cut(s) 634
AspLEI GCGC 4 cut(s) 296, 526, 1334, 1378
AspS9I GGNCC 6 cut(s) 273, 598, 796, 962, 1077, 1680
AvaI CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
AvaII GGWCC 3 cut(s) 962, 1077, 1680
AvrII CCTAGG 1 cut(s) 634
BaeGI GKGCMC 1 cut(s) 1183
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 5 cut(s) 159, 476, 873, 1331, 1670
BanII GRGCYC 1 cut(s) 1524
BauI CACGAG 2 cut(s) 116, 1487
BbsI GAAGAC 1 cut(s) 615
Bbv12I GWGCWC 1 cut(s) 1524
BbvI GCAGC 7 cut(s) 138, 162, 214, 751, 831, 1045, 1351
BceAI ACGGC 3 cut(s) 68, 1137, 1478
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BciT130I CCWGG 2 cut(s) 602, 1628
BcoDI GTCTC 2 cut(s) 1372, 1628
BcuI ACTAGT 1 cut(s) 373
BfaI CTAG 9 cut(s) 357, 374, 428, 497, 503, 635, 909, 1292, 1460
BfmI CTRYAG 2 cut(s) 164, 999
BfoI RGCGCY 2 cut(s) 527, 1335
BfuAI ACCTGC 2 cut(s) 180, 1249
BlnI CCTAGG 1 cut(s) 634
Bme18I GGWCC 3 cut(s) 962, 1077, 1680
BmeT110I CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
BmgBI CACGTC 1 cut(s) 733
BmgT120I GGNCC 6 cut(s) 273, 598, 796, 962, 1077, 1680
BmrI ACTGGG 2 cut(s) 794, 834
BmsI GCATC 4 cut(s) 34, 171, 562, 1164
BmuI ACTGGG 2 cut(s) 794, 834
BoxI GACNNNNGTC 2 cut(s) 731, 967
BpiI GAAGAC 1 cut(s) 615
BplI GAGNNNNNCTC 2 cut(s) 1292, 1324
BpmI CTGGAG 3 cut(s) 698, 1376, 1649
Bpu10I CCTNAGC 1 cut(s) 56
Bsa29I ATCGAT 2 cut(s) 15, 624
BsaBI GATNNNNATC 1 cut(s) 1224
BsaHI GRCGYC 3 cut(s) 612, 1206, 1332
BsaI GGTCTC 1 cut(s) 1628
BsaWI WCCGGW 4 cut(s) 40, 964, 1006, 1691
BsaXI ACNNNNNCTCC 4 cut(s) 887, 917, 1493, 1523
Bse118I RCCGGY 3 cut(s) 1328, 1673, 1691
Bse1I ACTGG 4 cut(s) 478, 798, 800, 829
Bse3DI GCAATG 1 cut(s) 839
Bse8I GATNNNNATC 1 cut(s) 1224
BseBI CCWGG 2 cut(s) 602, 1628
BseCI ATCGAT 2 cut(s) 15, 624
BseGI GGATG 6 cut(s) 49, 76, 186, 574, 922, 1511
BseJI GATNNNNATC 1 cut(s) 1224
BseMI GCAATG 1 cut(s) 839
BseMII CTCAG 3 cut(s) 79, 1311, 1398
BseNI ACTGG 4 cut(s) 478, 798, 800, 829
BseRI GAGGAG 3 cut(s) 569, 1250, 1514
BseSI GKGCMC 1 cut(s) 1183
BseX3I CGGCCG 1 cut(s) 1587
BseXI GCAGC 7 cut(s) 138, 162, 214, 751, 831, 1045, 1351
BseYI CCCAGC 1 cut(s) 431
BsgI GTGCAG 1 cut(s) 758
Bsh1236I CGCG 3 cut(s) 294, 296, 1378
Bsh1285I CGRYCG 1 cut(s) 1590
BshNI GGYRCC 5 cut(s) 159, 476, 873, 1331, 1670
BshTI ACCGGT 1 cut(s) 1691
BshVI ATCGAT 2 cut(s) 15, 624
BsiEI CGRYCG 1 cut(s) 1590
BsiHKAI GWGCWC 1 cut(s) 1524
BsiHKCI CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
BslFI GGGAC 8 cut(s) 266, 374, 450, 793, 975, 1319, 1415, 1666
BsmAI GTCTC 2 cut(s) 1372, 1628
BsmFI GGGAC 8 cut(s) 266, 374, 450, 793, 975, 1319, 1415, 1666
Bso31I GGTCTC 1 cut(s) 1628
BsoBI CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
Bsp1286I GDGCHC 2 cut(s) 1183, 1524
Bsp143I GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
BspCNI CTCAG 3 cut(s) 78, 1312, 1399
BspDI ATCGAT 2 cut(s) 15, 624
BspFNI CGCG 3 cut(s) 294, 296, 1378
BspMAI CTGCAG 1 cut(s) 1003
BspMI ACCTGC 2 cut(s) 180, 1249
BspPI GGATC 4 cut(s) 704, 858, 1352, 1473
BspQI GCTCTTC 1 cut(s) 1512
BspT107I GGYRCC 5 cut(s) 159, 476, 873, 1331, 1670
BspTNI GGTCTC 1 cut(s) 1628
BsrBI CCGCTC 1 cut(s) 1303
BsrDI GCAATG 1 cut(s) 839
BsrFI RCCGGY 3 cut(s) 1328, 1673, 1691
BsrI ACTGG 4 cut(s) 478, 798, 800, 829
BssAI RCCGGY 3 cut(s) 1328, 1673, 1691
BssMI GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
BssNAI GTATAC 2 cut(s) 232, 906
BssNI GRCGYC 3 cut(s) 612, 1206, 1332
BssSI CACGAG 2 cut(s) 116, 1487
BssT1I CCWWGG 2 cut(s) 133, 634
Bst1107I GTATAC 2 cut(s) 232, 906
Bst2BI CACGAG 2 cut(s) 116, 1487
Bst2UI CCWGG 2 cut(s) 602, 1628
Bst4CI ACNGT 4 cut(s) 168, 236, 312, 343
Bst6I CTCTTC 7 cut(s) 397, 524, 854, 932, 1190, 1377, 1512
BstACI GRCGYC 3 cut(s) 612, 1206, 1332
BstAPI GCANNNNNTGC 1 cut(s) 1427
BstC8I GCNNGC 4 cut(s) 1179, 1210, 1330, 1700
BstDEI CTNAG 4 cut(s) 56, 65, 1320, 1407
BstDSI CCRYGG 1 cut(s) 1494
BstEII GGTNACC 1 cut(s) 1088
BstF5I GGATG 6 cut(s) 49, 76, 186, 574, 922, 1511
BstFNI CGCG 3 cut(s) 294, 296, 1378
BstH2I RGCGCY 2 cut(s) 527, 1335
BstHHI GCGC 4 cut(s) 296, 526, 1334, 1378
BstKTI GATC 6 cut(s) 684, 712, 866, 1347, 1468, 1648
BstMAI GTCTC 2 cut(s) 1372, 1628
BstMBI GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
BstMCI CGRYCG 1 cut(s) 1590
BstMWI GCNNNNNNNGC 8 cut(s) 151, 181, 508, 1030, 1081, 1205, 1325, 1427
BstNI CCWGG 2 cut(s) 602, 1628
BstNSI RCATGY 1 cut(s) 388
BstPAI GACNNNNGTC 2 cut(s) 731, 967
BstPI GGTNACC 1 cut(s) 1088
BstSFI CTRYAG 2 cut(s) 164, 999
BstSLI GKGCMC 1 cut(s) 1183
BstUI CGCG 3 cut(s) 294, 296, 1378
BstV1I GCAGC 7 cut(s) 138, 162, 214, 751, 831, 1045, 1351
BstV2I GAAGAC 1 cut(s) 615
BstX2I RGATCY 1 cut(s) 863
BstYI RGATCY 1 cut(s) 863
BstZ17I GTATAC 2 cut(s) 232, 906
BstZI CGGCCG 1 cut(s) 1587
Bsu15I ATCGAT 2 cut(s) 15, 624
BsuTUI ATCGAT 2 cut(s) 15, 624
BtgI CCRYGG 1 cut(s) 1494
BtgZI GCGATG 3 cut(s) 62, 963, 1510
BtrI CACGTC 1 cut(s) 733
BtsCI GGATG 6 cut(s) 49, 76, 186, 574, 922, 1511
BtsIMutI CAGTG 1 cut(s) 807
BveI ACCTGC 2 cut(s) 180, 1249
Cac8I GCNNGC 4 cut(s) 1179, 1210, 1330, 1700
CaiI CAGNNNCTG 2 cut(s) 172, 1427
CfoI GCGC 4 cut(s) 296, 526, 1334, 1378
Cfr10I RCCGGY 3 cut(s) 1328, 1673, 1691
Cfr13I GGNCC 6 cut(s) 273, 598, 796, 962, 1077, 1680
Cfr9I CCCGGG 2 cut(s) 958, 1161
ClaI ATCGAT 2 cut(s) 15, 624
CseI GACGC 3 cut(s) 620, 725, 1214
CspAI ACCGGT 1 cut(s) 1691
CspCI CAANNNNNGTGG 2 cut(s) 251, 286
CviAII CATG 5 cut(s) 247, 385, 1081, 1171, 1274
DdeI CTNAG 4 cut(s) 56, 65, 1320, 1407
DinI GGCGCC 1 cut(s) 1333
DpnI GATC 6 cut(s) 683, 711, 865, 1346, 1467, 1647
DpnII GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
DraIII CACNNNGTG 1 cut(s) 736
EaeI YGGCCR 5 cut(s) 81, 243, 750, 1326, 1587
EagI CGGCCG 1 cut(s) 1587
Eam1104I CTCTTC 7 cut(s) 397, 524, 854, 932, 1190, 1377, 1512
EarI CTCTTC 7 cut(s) 397, 524, 854, 932, 1190, 1377, 1512
Ecl136II GAGCTC 1 cut(s) 1522
EclXI CGGCCG 1 cut(s) 1587
Eco130I CCWWGG 2 cut(s) 133, 634
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 1 cut(s) 1524
Eco31I GGTCTC 1 cut(s) 1628
Eco47I GGWCC 3 cut(s) 962, 1077, 1680
Eco47III AGCGCT 1 cut(s) 525
Eco52I CGGCCG 1 cut(s) 1587
Eco53kI GAGCTC 1 cut(s) 1522
Eco57I CTGAAG 4 cut(s) 47, 548, 1115, 1250
Eco88I CYCGRG 5 cut(s) 97, 316, 958, 1161, 1398
Eco91I GGTNACC 1 cut(s) 1088
EcoICRI GAGCTC 1 cut(s) 1522
EcoO109I RGGNCCY 1 cut(s) 1680
EcoO65I GGTNACC 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 287
EcoRII CCWGG 2 cut(s) 600, 1626
EcoT14I CCWWGG 2 cut(s) 133, 634
EcoT38I GRGCYC 1 cut(s) 1524
EgeI GGCGCC 1 cut(s) 1333
EheI GGCGCC 1 cut(s) 1333
ErhI CCWWGG 2 cut(s) 133, 634
FaeI CATG 5 cut(s) 250, 388, 1084, 1174, 1277
FalI AAGNNNNNCTT 4 cut(s) 600, 632, 657, 689
FaqI GGGAC 8 cut(s) 266, 374, 450, 793, 975, 1319, 1415, 1666
FatI CATG 5 cut(s) 246, 384, 1080, 1170, 1273
FauI CCCGC 5 cut(s) 328, 1170, 1296, 1371, 1611
FblI GTMKAC 3 cut(s) 231, 630, 905
FokI GGATG 6 cut(s) 56, 83, 193, 581, 929, 1498
FriOI GRGCYC 1 cut(s) 1524
FspBI CTAG 9 cut(s) 357, 374, 428, 497, 503, 635, 909, 1292, 1460
GlaI GCGC 4 cut(s) 295, 525, 1333, 1377
GsaI CCCAGC 1 cut(s) 435
GsuI CTGGAG 3 cut(s) 698, 1376, 1649
HaeII RGCGCY 2 cut(s) 527, 1335
HgaI GACGC 3 cut(s) 620, 725, 1214
HhaI GCGC 4 cut(s) 296, 526, 1334, 1378
Hin1I GRCGYC 3 cut(s) 612, 1206, 1332
Hin1II CATG 5 cut(s) 250, 388, 1084, 1174, 1277
Hin6I GCGC 4 cut(s) 294, 524, 1332, 1376
HinP1I GCGC 4 cut(s) 294, 524, 1332, 1376
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HinfI GANTC 9 cut(s) 88, 121, 952, 968, 1147, 1166, 1307, 1403, 1424
Hpy166II GTNNAC 6 cut(s) 232, 301, 631, 704, 906, 1195
Hpy188I TCNGA 5 cut(s) 471, 1230, 1372, 1408, 1516
Hpy188III TCNNGA 5 cut(s) 677, 713, 763, 1400, 1649
Hpy8I GTNNAC 6 cut(s) 232, 301, 631, 704, 906, 1195
Hpy99I CGWCG 5 cut(s) 719, 737, 758, 836, 976
HpyCH4III ACNGT 4 cut(s) 168, 236, 312, 343
HpyCH4IV ACGT 3 cut(s) 732, 756, 902
HpyCH4V TGCA 3 cut(s) 115, 739, 1001
HpyF10VI GCNNNNNNNGC 8 cut(s) 151, 181, 508, 1030, 1081, 1205, 1325, 1427
HpyF3I CTNAG 4 cut(s) 56, 65, 1320, 1407
HpySE526I ACGT 3 cut(s) 732, 756, 902
Hsp92I GRCGYC 3 cut(s) 612, 1206, 1332
Hsp92II CATG 5 cut(s) 250, 388, 1084, 1174, 1277
HspAI GCGC 4 cut(s) 294, 524, 1332, 1376
KasI GGCGCC 1 cut(s) 1331
KflI GGGWCCC 1 cut(s) 1680
KpnI GGTACC 1 cut(s) 480
KroI GCCGGC 1 cut(s) 1328
KroNI GCCGGC 1 cut(s) 1330
Kzo9I GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 7 cut(s) 52, 132, 516, 724, 828, 1300, 1351
Lsp1109I GCAGC 7 cut(s) 138, 162, 214, 751, 831, 1045, 1351
LweI GCATC 4 cut(s) 34, 171, 562, 1164
MaeI CTAG 9 cut(s) 357, 374, 428, 497, 503, 635, 909, 1292, 1460
MaeII ACGT 3 cut(s) 732, 756, 902
MaeIII GTNAC 6 cut(s) 192, 343, 376, 724, 898, 1088
MalI GATC 6 cut(s) 683, 711, 865, 1346, 1467, 1647
MbiI CCGCTC 1 cut(s) 1303
MboI GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
MflI RGATCY 1 cut(s) 863
MhlI GDGCHC 2 cut(s) 1183, 1524
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 3 cut(s) 287, 447, 1610
MluNI TGGCCA 1 cut(s) 245
Mly113I GGCGCC 1 cut(s) 1332
MlyI GAGTC 4 cut(s) 977, 1301, 1397, 1433
Mox20I TGGCCA 1 cut(s) 245
MroNI GCCGGC 1 cut(s) 1328
MroXI GAANNNNTTC 1 cut(s) 672
MscI TGGCCA 1 cut(s) 245
MseI TTAA 2 cut(s) 450, 1572
MslI CAYNNNNRTG 3 cut(s) 624, 885, 1529
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 4 cut(s) 151, 205, 1036, 1342
MvaI CCWGG 2 cut(s) 602, 1628
MvnI CGCG 3 cut(s) 294, 296, 1378
MwoI GCNNNNNNNGC 8 cut(s) 151, 181, 508, 1030, 1081, 1205, 1325, 1427
NaeI GCCGGC 1 cut(s) 1330
NarI GGCGCC 1 cut(s) 1332
NdeII GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
NgoMIV GCCGGC 1 cut(s) 1328
NlaIII CATG 5 cut(s) 250, 388, 1084, 1174, 1277
NmuCI GTSAC 4 cut(s) 192, 724, 898, 1088
NspI RCATGY 1 cut(s) 388
PaeR7I CTCGAG 1 cut(s) 316
PaqCI CACCTGC 1 cut(s) 1249
PceI AGGCCT 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 1512
PcsI WCGNNNNNNNCGW 1 cut(s) 1056
PdiI GCCGGC 1 cut(s) 1330
PdmI GAANNNNTTC 1 cut(s) 672
PfeI GAWTC 5 cut(s) 88, 121, 952, 1147, 1166
PflMI CCANNNNNTGG 2 cut(s) 983, 1437
PfoI TCCNGGA 1 cut(s) 1626
PinAI ACCGGT 1 cut(s) 1691
PleI GAGTC 4 cut(s) 976, 1301, 1397, 1432
PluTI GGCGCC 1 cut(s) 1335
PpsI GAGTC 4 cut(s) 976, 1301, 1397, 1432
PpuMI RGGWCCY 1 cut(s) 1680
PshAI GACNNNNGTC 2 cut(s) 731, 967
Psp124BI GAGCTC 1 cut(s) 1524
Psp5II RGGWCCY 1 cut(s) 1680
Psp6I CCWGG 2 cut(s) 600, 1626
PspEI GGTNACC 1 cut(s) 1088
PspFI CCCAGC 1 cut(s) 431
PspGI CCWGG 2 cut(s) 600, 1626
PspPI GGNCC 6 cut(s) 273, 598, 796, 962, 1077, 1680
PspPPI RGGWCCY 1 cut(s) 1680
PspXI VCTCGAGB 1 cut(s) 316
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 2 cut(s) 172, 1427
PsuI RGATCY 1 cut(s) 863
PvuII CAGCTG 2 cut(s) 205, 1036
RseI CAYNNNNRTG 3 cut(s) 624, 885, 1529
SacI GAGCTC 1 cut(s) 1524
SalI GTCGAC 1 cut(s) 629
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 2 cut(s) 450, 1572
Sau3AI GATC 6 cut(s) 681, 709, 863, 1344, 1465, 1645
Sau96I GGNCC 6 cut(s) 273, 598, 796, 962, 1077, 1680
SchI GAGTC 4 cut(s) 977, 1301, 1397, 1433
SduI GDGCHC 2 cut(s) 1183, 1524
SfaNI GCATC 4 cut(s) 34, 171, 562, 1164
SfcI CTRYAG 2 cut(s) 164, 999
SfoI GGCGCC 1 cut(s) 1333
Sfr274I CTCGAG 1 cut(s) 316
SinI GGWCC 3 cut(s) 962, 1077, 1680
SlaI CTCGAG 1 cut(s) 316
SmaI CCCGGG 2 cut(s) 960, 1163
SmiMI CAYNNNNRTG 3 cut(s) 624, 885, 1529
SmlI CTYRAG 1 cut(s) 316
SmoI CTYRAG 1 cut(s) 316
SpeI ACTAGT 1 cut(s) 373
Sse9I AATT 3 cut(s) 287, 447, 1610
SseBI AGGCCT 1 cut(s) 61
SspDI GGCGCC 1 cut(s) 1331
SspMI CTAG 9 cut(s) 357, 374, 428, 497, 503, 635, 909, 1292, 1460
SstI GAGCTC 1 cut(s) 1524
StuI AGGCCT 1 cut(s) 61
StyI CCWWGG 2 cut(s) 133, 634
TaaI ACNGT 4 cut(s) 168, 236, 312, 343
TaiI ACGT 3 cut(s) 735, 759, 905
TaqI TCGA 7 cut(s) 15, 317, 395, 624, 630, 821, 883
TaqII GACCGA 1 cut(s) 645
TasI AATT 3 cut(s) 287, 447, 1610
TatI WGTACW 2 cut(s) 312, 1503
TauI GCSGC 4 cut(s) 356, 1421, 1589, 1658
TfiI GAWTC 5 cut(s) 88, 121, 952, 1147, 1166
Tru1I TTAA 2 cut(s) 450, 1572
Tru9I TTAA 2 cut(s) 450, 1572
TscAI CASTG 1 cut(s) 807
TseFI GTSAC 4 cut(s) 192, 724, 898, 1088
TseI GCWGC 7 cut(s) 151, 175, 202, 739, 844, 1033, 1339
Tsp45I GTSAC 4 cut(s) 192, 724, 898, 1088
TspDTI ATGAA 6 cut(s) 17, 300, 1077, 1262, 1580, 1617
TspGWI ACGGA 2 cut(s) 1065, 1364
TspMI CCCGGG 2 cut(s) 958, 1161
TspRI CASTG 1 cut(s) 807
Van91I CCANNNNNTGG 2 cut(s) 983, 1437
VpaK11BI GGWCC 3 cut(s) 962, 1077, 1680
XapI RAATTY 2 cut(s) 287, 1610
XceI RCATGY 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 1 cut(s) 1691
XhoI CTCGAG 1 cut(s) 316
XmaI CCCGGG 2 cut(s) 958, 1161
XmaJI CCTAGG 1 cut(s) 634
XmiI GTMKAC 3 cut(s) 231, 630, 905
XmnI GAANNNNTTC 1 cut(s) 672
XspI CTAG 9 cut(s) 357, 374, 428, 497, 503, 635, 909, 1292, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.