Rmu_sc0000271.1_g000031

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000271.1
OG0000087
Physical Location & Seq
Reverse (-)
158187 .. 162049
3863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000271.1_g000031.1.cds

Sequence Viewer

Length: 1356 bp
atggtggccggagggtgttctccggtggttgcagaggaagagaagaagaagagaggaagagaaaaagagaagaagaagagaggtcgaggttctccggtggttgcagaggacgagaagaagagaagaagaagagaggtcgaggttccccggggagtttatgtcgaattttcgaataaacctttctctaacttggtctatatggatccaccttggaattcgggaacgggtctgacagcaggaggtgtagctcaggcctctacgtcccgttatctccaaaagcttggcgttagcttctttcaatcattgcaatgtgggatttgtgcgagatggggtggccgtcgattaacgagttctgggccatttactatttggtttaatcaaagaagtttatgggcgaggataaagaataagaagtggtatttaactggaacatttcaagctatcggggaccagtcgtacacactttcgaaggtagagaggaagcggatagcaagagtgtatgctgtgtggtgtgaccttgaagataggagctcgtataggttcacccggtacttaatactggataggttggggataggaagagtactcgtgaaagtactgaagaggaaaccatggaaagaaaaacctgaagataggatggatgacgccaagttgatggatagattgatcagccaaggggaggatgcccttcacattgaagtggacttgtccaccaagaagactaggagaatgctaggggagatgctgctggagatatctaatgacacgtatgggcagccagacccaaatgcgcccatcatgaacaaggaaagcatctcgaccagtaaggtagtcacagtggtggatcctttgaaaggaaaggttgaggcaacggggtcgcaggcatcccactcaggcgaatcgttgactggcacgggagtctatgatgtaggtaaggagcttgtatcccttttgtactttgctacaaatactcttactcttgtactcatggtgaagtgcctacacgaggagaaaagtaagctggagaaggagcgggacttcctgacccaaaaggtagcctccttaaccacgaaaatcagcaagctagaagaagagaagaaaatgatcccggaactcgaggaggggaaaaccaactgctggagaggtaagatagagtatctggaaggtcgtgttcctaaggtacgccgggaagcagtggcagaatacaaagtttcccaagagctggtttatttgcttatcgctcaagacaagaccgtgatcgagaagtacctgaagtgggtggctacgaggtacatggatgaagggaagtttaagcgtgggcttatcgacaagaagaaaaaggagaaagaggcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

451

Amino Acids

51.56

Weight (kDa)

9.62

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1137, 1222
AccBSI CCGCTC 1 cut(s) 1033
AciI CCGC 2 cut(s) 484, 1033
AclWI GGATC 5 cut(s) 197, 210, 839, 852, 1099
AcoI YGGCCR 2 cut(s) 6, 334
AcsI RAATTY 2 cut(s) 164, 214
AcuI CTGAAG 3 cut(s) 620, 648, 1292
AcyI GRCGYC 1 cut(s) 645
AfaI GTAC 9 cut(s) 458, 551, 585, 597, 956, 984, 1182, 1268, 1292
AfiI CCNNNNNNNGG 6 cut(s) 679, 854, 1006, 1137, 1222, 1276
AflIII ACRYGT 1 cut(s) 765
AgsI TTSAA 5 cut(s) 299, 437, 521, 698, 853
AleI CACNNNNGTG 1 cut(s) 839
AluBI AGCT 9 cut(s) 248, 280, 291, 440, 531, 940, 1021, 1084, 1222
AluI AGCT 9 cut(s) 248, 280, 291, 440, 531, 940, 1021, 1084, 1222
Alw21I GWGCWC 1 cut(s) 533
AlwI GGATC 5 cut(s) 197, 210, 839, 852, 1099
Ama87I CYCGRG 2 cut(s) 147, 1115
AoxI GGCC 4 cut(s) 6, 252, 334, 356
ApeKI GCWGC 2 cut(s) 745, 775
ApoI RAATTY 2 cut(s) 164, 214
AspLEI GCGC 1 cut(s) 793
AspS9I GGNCC 2 cut(s) 356, 448
AsuC2I CCSGG 5 cut(s) 148, 149, 547, 1109, 1187
AsuHPI GGTGA 2 cut(s) 535, 1003
AsuII TTCGAA 2 cut(s) 170, 467
AvaI CYCGRG 2 cut(s) 147, 1115
AvaII GGWCC 1 cut(s) 448
AxyI CCTNAGG 1 cut(s) 1176
BamHI GGATCC 2 cut(s) 202, 844
BanII GRGCYC 1 cut(s) 533
BauI CACGAG 2 cut(s) 587, 1004
BbsI GAAGAC 1 cut(s) 725
Bbv12I GWGCWC 1 cut(s) 533
BbvI GCAGC 2 cut(s) 732, 787
BccI CCATC 4 cut(s) 321, 631, 649, 803
BceAI ACGGC 1 cut(s) 321
BcgI CGANNNNNNTGC 2 cut(s) 858, 892
BciVI GTATCC 1 cut(s) 955
BclI TGATCA 1 cut(s) 666
BcnI CCSGG 5 cut(s) 148, 149, 547, 1109, 1187
BfaI CTAG 3 cut(s) 723, 734, 1085
BfuI GTATCC 1 cut(s) 955
BisI GCNGC 2 cut(s) 746, 776
BlsI GCNGC 2 cut(s) 747, 777
BmcAI AGTACT 2 cut(s) 585, 597
Bme1390I CCNGG 5 cut(s) 148, 149, 547, 1109, 1187
Bme18I GGWCC 1 cut(s) 448
BmeT110I CYCGRG 2 cut(s) 147, 1115
BmgT120I GGNCC 2 cut(s) 356, 448
BmiI GGNNCC 4 cut(s) 144, 204, 449, 846
BmrFI CCNGG 5 cut(s) 148, 149, 547, 1109, 1187
BmsI GCATC 4 cut(s) 673, 732, 822, 893
BpiI GAAGAC 1 cut(s) 725
BpmI CTGGAG 3 cut(s) 770, 1043, 1159
Bpu10I CCTNAGC 1 cut(s) 249
Bpu14I TTCGAA 2 cut(s) 170, 467
BpuEI CTTGAG 1 cut(s) 1227
BpuMI CCSGG 5 cut(s) 148, 149, 547, 1109, 1187
BsaAI YACGTR 1 cut(s) 768
BsaHI GRCGYC 1 cut(s) 645
BsaJI CCNNGG 6 cut(s) 146, 147, 148, 209, 611, 673
BsaWI WCCGGW 2 cut(s) 22, 94
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 6 cut(s) 679, 854, 1006, 1137, 1222, 1276
Bse1I ACTGG 5 cut(s) 430, 451, 564, 822, 913
Bse21I CCTNAGG 1 cut(s) 1176
Bse3DI GCAATG 2 cut(s) 302, 314
BseDI CCNNGG 6 cut(s) 146, 147, 148, 209, 611, 673
BseGI GGATG 5 cut(s) 642, 646, 688, 884, 1303
BseLI CCNNNNNNNGG 6 cut(s) 679, 854, 1006, 1137, 1222, 1276
BseMI GCAATG 2 cut(s) 302, 314
BseMII CTCAG 2 cut(s) 263, 906
BseNI ACTGG 5 cut(s) 430, 451, 564, 822, 913
BseRI GAGGAG 2 cut(s) 1022, 1133
BseXI GCAGC 2 cut(s) 732, 787
BshFI GGCC 4 cut(s) 8, 254, 336, 358
BsiHKAI GWGCWC 1 cut(s) 533
BsiHKCI CYCGRG 2 cut(s) 147, 1115
BsiSI CCGG 7 cut(s) 9, 23, 95, 148, 547, 1109, 1186
BslFI GGGAC 3 cut(s) 247, 461, 1049
BslI CCNNNNNNNGG 6 cut(s) 679, 854, 1006, 1137, 1222, 1276
BsmFI GGGAC 3 cut(s) 247, 461, 1049
BsmI GAATGC 1 cut(s) 735
BsnI GGCC 4 cut(s) 8, 254, 336, 358
BsoBI CYCGRG 2 cut(s) 147, 1115
Bsp119I TTCGAA 2 cut(s) 170, 467
Bsp1286I GDGCHC 1 cut(s) 533
Bsp143I GATC 5 cut(s) 202, 666, 844, 1104, 1257
Bsp19I CCATGG 1 cut(s) 611
BspACI CCGC 2 cut(s) 484, 1033
BspANI GGCC 4 cut(s) 8, 254, 336, 358
BspCNI CTCAG 2 cut(s) 262, 905
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 4 cut(s) 144, 204, 449, 846
BspPI GGATC 5 cut(s) 197, 210, 839, 852, 1099
BspT104I TTCGAA 2 cut(s) 170, 467
BsrBI CCGCTC 1 cut(s) 1033
BsrDI GCAATG 2 cut(s) 302, 314
BsrI ACTGG 5 cut(s) 430, 451, 564, 822, 913
BssECI CCNNGG 6 cut(s) 146, 147, 148, 209, 611, 673
BssMI GATC 5 cut(s) 202, 666, 844, 1104, 1257
BssNI GRCGYC 1 cut(s) 645
BssSI CACGAG 2 cut(s) 587, 1004
BssT1I CCWWGG 3 cut(s) 209, 611, 673
Bst2BI CACGAG 2 cut(s) 587, 1004
Bst4CI ACNGT 2 cut(s) 838, 1255
Bst6I CTCTTC 9 cut(s) 33, 44, 52, 71, 113, 124, 574, 596, 1086
BstACI GRCGYC 1 cut(s) 645
BstBAI YACGTR 1 cut(s) 768
BstBI TTCGAA 2 cut(s) 170, 467
BstC8I GCNNGC 2 cut(s) 882, 1082
BstDEI CTNAG 3 cut(s) 249, 892, 1176
BstDSI CCRYGG 1 cut(s) 611
BstENI CCTNNNNNAGG 2 cut(s) 852, 1004
BstF5I GGATG 5 cut(s) 642, 646, 688, 884, 1303
BstHHI GCGC 1 cut(s) 793
BstKTI GATC 5 cut(s) 205, 669, 847, 1107, 1260
BstMBI GATC 5 cut(s) 202, 666, 844, 1104, 1257
BstSCI CCNGG 5 cut(s) 146, 147, 545, 1107, 1185
BstV1I GCAGC 2 cut(s) 732, 787
BstV2I GAAGAC 1 cut(s) 725
BstX2I RGATCY 2 cut(s) 202, 844
BstXI CCANNNNNNTGG 2 cut(s) 281, 655
BstYI RGATCY 2 cut(s) 202, 844
Bsu36I CCTNAGG 1 cut(s) 1176
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 4 cut(s) 8, 254, 336, 358
BtgI CCRYGG 1 cut(s) 611
BtsCI GGATG 5 cut(s) 642, 646, 688, 884, 1303
BtsI GCAGTG 1 cut(s) 1200
BtsIMutI CAGTG 2 cut(s) 843, 1200
Cac8I GCNNGC 2 cut(s) 882, 1082
CciI TCATGA 1 cut(s) 798
CfoI GCGC 1 cut(s) 793
Cfr13I GGNCC 2 cut(s) 356, 448
Cfr9I CCCGGG 1 cut(s) 147
CseI GACGC 1 cut(s) 653
Csp6I GTAC 9 cut(s) 457, 550, 584, 596, 955, 983, 1181, 1267, 1291
CviAII CATG 4 cut(s) 612, 799, 988, 1294
CviQI GTAC 9 cut(s) 457, 550, 584, 596, 955, 983, 1181, 1267, 1291
DdeI CTNAG 3 cut(s) 249, 892, 1176
DpnI GATC 5 cut(s) 204, 668, 846, 1106, 1259
DpnII GATC 5 cut(s) 202, 666, 844, 1104, 1257
EaeI YGGCCR 2 cut(s) 6, 334
Eam1104I CTCTTC 9 cut(s) 33, 44, 52, 71, 113, 124, 574, 596, 1086
EarI CTCTTC 9 cut(s) 33, 44, 52, 71, 113, 124, 574, 596, 1086
Ecl136II GAGCTC 1 cut(s) 531
Eco130I CCWWGG 3 cut(s) 209, 611, 673
Eco147I AGGCCT 1 cut(s) 254
Eco24I GRGCYC 1 cut(s) 533
Eco32I GATATC 1 cut(s) 756
Eco47I GGWCC 1 cut(s) 448
Eco53kI GAGCTC 1 cut(s) 531
Eco57I CTGAAG 3 cut(s) 620, 648, 1292
Eco81I CCTNAGG 1 cut(s) 1176
Eco88I CYCGRG 2 cut(s) 147, 1115
EcoICRI GAGCTC 1 cut(s) 531
EcoNI CCTNNNNNAGG 2 cut(s) 852, 1004
EcoRI GAATTC 1 cut(s) 214
EcoRV GATATC 1 cut(s) 756
EcoT14I CCWWGG 3 cut(s) 209, 611, 673
EcoT38I GRGCYC 1 cut(s) 533
ErhI CCWWGG 3 cut(s) 209, 611, 673
FaeI CATG 4 cut(s) 615, 802, 991, 1297
FaqI GGGAC 3 cut(s) 247, 461, 1049
FatI CATG 4 cut(s) 611, 798, 987, 1293
FauI CCCGC 1 cut(s) 1026
FbaI TGATCA 1 cut(s) 666
Fnu4HI GCNGC 2 cut(s) 746, 776
FokI GGATG 5 cut(s) 649, 653, 695, 871, 1310
FriOI GRGCYC 1 cut(s) 533
Fsp4HI GCNGC 2 cut(s) 746, 776
FspBI CTAG 3 cut(s) 723, 734, 1085
GlaI GCGC 1 cut(s) 792
GluI GCNGC 2 cut(s) 746, 776
GsuI CTGGAG 3 cut(s) 770, 1043, 1159
HaeIII GGCC 4 cut(s) 8, 254, 336, 358
HapII CCGG 7 cut(s) 9, 23, 95, 148, 547, 1109, 1186
HgaI GACGC 1 cut(s) 653
HhaI GCGC 1 cut(s) 793
Hin1I GRCGYC 1 cut(s) 645
Hin1II CATG 4 cut(s) 615, 802, 991, 1297
Hin6I GCGC 1 cut(s) 791
HinP1I GCGC 1 cut(s) 791
HincII GTYRAC 1 cut(s) 906
HindII GTYRAC 1 cut(s) 906
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 2 cut(s) 899, 918
HpaII CCGG 7 cut(s) 9, 23, 95, 148, 547, 1109, 1186
HphI GGTGA 2 cut(s) 535, 1003
Hpy166II GTNNAC 5 cut(s) 459, 543, 703, 711, 906
Hpy188I TCNGA 1 cut(s) 231
Hpy188III TCNNGA 8 cut(s) 219, 589, 799, 817, 1042, 1160, 1244, 1261
Hpy8I GTNNAC 5 cut(s) 459, 543, 703, 711, 906
Hpy99I CGWCG 1 cut(s) 342
HpyAV CCTTC 5 cut(s) 463, 698, 1021, 1157, 1295
HpyCH4III ACNGT 2 cut(s) 838, 1255
HpyCH4IV ACGT 2 cut(s) 260, 767
HpyCH4V TGCA 3 cut(s) 32, 104, 307
HpyF3I CTNAG 3 cut(s) 249, 892, 1176
HpySE526I ACGT 2 cut(s) 260, 767
Hsp92I GRCGYC 1 cut(s) 645
Hsp92II CATG 4 cut(s) 615, 802, 991, 1297
HspAI GCGC 1 cut(s) 791
Ksp22I TGATCA 1 cut(s) 666
Kzo9I GATC 5 cut(s) 202, 666, 844, 1104, 1257
LmnI GCTCC 3 cut(s) 528, 937, 1030
Lsp1109I GCAGC 2 cut(s) 732, 787
LweI GCATC 4 cut(s) 673, 732, 822, 893
MaeI CTAG 3 cut(s) 723, 734, 1085
MaeII ACGT 2 cut(s) 260, 767
MaeIII GTNAC 2 cut(s) 512, 832
MalI GATC 5 cut(s) 204, 668, 846, 1106, 1259
MbiI CCGCTC 1 cut(s) 1033
MboI GATC 5 cut(s) 202, 666, 844, 1104, 1257
MflI RGATCY 2 cut(s) 202, 844
MhlI GDGCHC 1 cut(s) 533
MluCI AATT 2 cut(s) 164, 214
MlyI GAGTC 1 cut(s) 927
MseI TTAA 7 cut(s) 344, 375, 422, 554, 1064, 1311, 1354
MslI CAYNNNNRTG 3 cut(s) 307, 698, 839
MspI CCGG 7 cut(s) 9, 23, 95, 148, 547, 1109, 1186
MspR9I CCNGG 5 cut(s) 148, 149, 547, 1109, 1187
Mva1269I GAATGC 1 cut(s) 735
NciI CCSGG 5 cut(s) 148, 149, 547, 1109, 1187
NcoI CCATGG 1 cut(s) 611
NdeII GATC 5 cut(s) 202, 666, 844, 1104, 1257
NlaIII CATG 4 cut(s) 615, 802, 991, 1297
NlaIV GGNNCC 4 cut(s) 144, 204, 449, 846
NmuCI GTSAC 2 cut(s) 512, 832
NspV TTCGAA 2 cut(s) 170, 467
OliI CACNNNNGTG 1 cut(s) 839
PaeR7I CTCGAG 1 cut(s) 1115
PagI TCATGA 1 cut(s) 798
PceI AGGCCT 1 cut(s) 254
PctI GAATGC 1 cut(s) 735
PfeI GAWTC 1 cut(s) 899
PflMI CCANNNNNTGG 2 cut(s) 1137, 1222
PfoI TCCNGGA 1 cut(s) 1107
PkrI GCNGC 2 cut(s) 747, 777
PleI GAGTC 1 cut(s) 926
PpsI GAGTC 1 cut(s) 926
Ppu21I YACGTR 1 cut(s) 768
Psp124BI GAGCTC 1 cut(s) 533
PspN4I GGNNCC 4 cut(s) 144, 204, 449, 846
PspPI GGNCC 2 cut(s) 356, 448
PspXI VCTCGAGB 1 cut(s) 1115
PsuI RGATCY 2 cut(s) 202, 844
RsaI GTAC 9 cut(s) 458, 551, 585, 597, 956, 984, 1182, 1268, 1292
RsaNI GTAC 9 cut(s) 457, 550, 584, 596, 955, 983, 1181, 1267, 1291
RseI CAYNNNNRTG 3 cut(s) 307, 698, 839
SacI GAGCTC 1 cut(s) 533
SaqAI TTAA 7 cut(s) 344, 375, 422, 554, 1064, 1311, 1354
SatI GCNGC 2 cut(s) 746, 776
Sau3AI GATC 5 cut(s) 202, 666, 844, 1104, 1257
Sau96I GGNCC 2 cut(s) 356, 448
ScaI AGTACT 2 cut(s) 585, 597
SchI GAGTC 1 cut(s) 927
ScrFI CCNGG 5 cut(s) 148, 149, 547, 1109, 1187
SduI GDGCHC 1 cut(s) 533
SfaNI GCATC 4 cut(s) 673, 732, 822, 893
Sfr274I CTCGAG 1 cut(s) 1115
SfuI TTCGAA 2 cut(s) 170, 467
SinI GGWCC 1 cut(s) 448
SlaI CTCGAG 1 cut(s) 1115
SmaI CCCGGG 1 cut(s) 149
SmiMI CAYNNNNRTG 3 cut(s) 307, 698, 839
SmlI CTYRAG 2 cut(s) 1115, 1242
SmoI CTYRAG 2 cut(s) 1115, 1242
Sse9I AATT 2 cut(s) 164, 214
SseBI AGGCCT 1 cut(s) 254
SsiI CCGC 2 cut(s) 484, 1033
SspMI CTAG 3 cut(s) 723, 734, 1085
SstI GAGCTC 1 cut(s) 533
StuI AGGCCT 1 cut(s) 254
StyD4I CCNGG 5 cut(s) 146, 147, 545, 1107, 1185
StyI CCWWGG 3 cut(s) 209, 611, 673
TaaI ACNGT 2 cut(s) 838, 1255
TaiI ACGT 2 cut(s) 263, 770
TasI AATT 2 cut(s) 164, 214
TatI WGTACW 4 cut(s) 583, 595, 954, 982
TfiI GAWTC 1 cut(s) 899
Tru1I TTAA 7 cut(s) 344, 375, 422, 554, 1064, 1311, 1354
Tru9I TTAA 7 cut(s) 344, 375, 422, 554, 1064, 1311, 1354
TscAI CASTG 2 cut(s) 843, 1200
TseFI GTSAC 2 cut(s) 512, 832
TseI GCWGC 2 cut(s) 745, 775
Tsp45I GTSAC 2 cut(s) 512, 832
TspDTI ATGAA 2 cut(s) 815, 1314
TspMI CCCGGG 1 cut(s) 147
TspRI CASTG 2 cut(s) 843, 1200
Van91I CCANNNNNTGG 2 cut(s) 1137, 1222
VpaK11BI GGWCC 1 cut(s) 448
XagI CCTNNNNNAGG 2 cut(s) 852, 1004
XapI RAATTY 2 cut(s) 164, 214
XcmI CCANNNNNNNNNTGG 1 cut(s) 366
XhoI CTCGAG 1 cut(s) 1115
XmaI CCCGGG 1 cut(s) 147
XspI CTAG 3 cut(s) 723, 734, 1085
ZrmI AGTACT 2 cut(s) 585, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.