Rmu_sc0000455.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000455.1
OG0000087
Physical Location & Seq
Reverse (-)
94758 .. 95174
417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000455.1_g000020.1.cds

Sequence Viewer

Length: 417 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgcccggcaagctgaggtggatatcgatcggtacttaggccgggtagatcaattagcagagaacacggggtcctcgactggggtgttctcgcagagtagtgaggagtccgacgagggtgagagcgagggtggatccgcgggggccctggtagtcacagtggccattcccaagggcattccgaagccgaggtacacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacctgcaattgaagtgggggataccggacgaggtggagcttaggcctcttagggatggggaactggcggcgaatcctgccccggggtgggtggcgctgcacgagaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

138

Amino Acids

14.67

Weight (kDa)

4.34

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 318
AccII CGCG 1 cut(s) 188
AciI CCGC 4 cut(s) 186, 188, 251, 374
AclWI GGATC 3 cut(s) 40, 177, 190
AcoI YGGCCR 1 cut(s) 210
AfaI GTAC 3 cut(s) 41, 83, 242
AfiI CCNNNNNNNGG 5 cut(s) 21, 129, 389, 393, 394
AgsI TTSAA 1 cut(s) 319
AjnI CCWGG 2 cut(s) 14, 195
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 2 cut(s) 62, 346
AluI AGCT 2 cut(s) 62, 346
AlwI GGATC 3 cut(s) 40, 177, 190
Ama87I CYCGRG 2 cut(s) 275, 388
AoxI GGCC 4 cut(s) 88, 192, 210, 350
ApaI GGGCCC 1 cut(s) 196
ApeKI GCWGC 1 cut(s) 403
AspLEI GCGC 1 cut(s) 403
AspS9I GGNCC 4 cut(s) 120, 192, 193, 258
AsuC2I CCSGG 6 cut(s) 55, 92, 276, 277, 389, 390
AsuHPI GGTGA 1 cut(s) 179
AvaI CYCGRG 2 cut(s) 275, 388
AvaII GGWCC 2 cut(s) 120, 258
BaeGI GKGCMC 1 cut(s) 196
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 1 cut(s) 182
BanII GRGCYC 1 cut(s) 196
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 39
BbvCI CCTCAGC 1 cut(s) 63
BbvI GCAGC 1 cut(s) 390
BccI CCATC 2 cut(s) 248, 356
BciT130I CCWGG 2 cut(s) 16, 197
BciVI GTATCC 2 cut(s) 19, 321
BcnI CCSGG 6 cut(s) 55, 92, 276, 277, 389, 390
BfoI RGCGCY 1 cut(s) 404
BfuAI ACCTGC 1 cut(s) 318
BfuI GTATCC 2 cut(s) 19, 321
BisI GCNGC 2 cut(s) 375, 404
BlsI GCNGC 2 cut(s) 376, 405
Bme1390I CCNGG 8 cut(s) 16, 55, 92, 197, 276, 277, 389, 390
Bme18I GGWCC 2 cut(s) 120, 258
BmeT110I CYCGRG 2 cut(s) 275, 388
BmgT120I GGNCC 4 cut(s) 120, 192, 193, 258
BmiI GGNNCC 5 cut(s) 121, 184, 193, 194, 259
BmrFI CCNGG 8 cut(s) 16, 55, 92, 197, 276, 277, 389, 390
BmrI ACTGGG 1 cut(s) 138
BmuI ACTGGG 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 39
Bpu10I CCTNAGC 2 cut(s) 63, 347
BpuMI CCSGG 6 cut(s) 55, 92, 276, 277, 389, 390
Bsa29I ATCGAT 1 cut(s) 75
BsaBI GATNNNNATC 1 cut(s) 75
BsaJI CCNNGG 9 cut(s) 15, 186, 195, 219, 236, 275, 387, 388, 389
BsaWI WCCGGW 1 cut(s) 331
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 129, 389, 393, 394
Bse1I ACTGG 3 cut(s) 43, 133, 375
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 2 cut(s) 16, 197
BseCI ATCGAT 1 cut(s) 75
BseDI CCNNGG 9 cut(s) 15, 186, 195, 219, 236, 275, 387, 388, 389
BseGI GGATG 2 cut(s) 259, 367
BseJI GATNNNNATC 1 cut(s) 75
BseLI CCNNNNNNNGG 5 cut(s) 21, 129, 389, 393, 394
BseMII CTCAG 1 cut(s) 54
BseNI ACTGG 3 cut(s) 43, 133, 375
BseRI GAGGAG 1 cut(s) 167
BseSI GKGCMC 1 cut(s) 196
BseXI GCAGC 1 cut(s) 390
BsgI GTGCAG 1 cut(s) 389
Bsh1236I CGCG 1 cut(s) 188
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 4 cut(s) 90, 194, 212, 352
BshVI ATCGAT 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 79
BsiHKCI CYCGRG 2 cut(s) 275, 388
BsiSI CCGG 5 cut(s) 55, 91, 276, 332, 389
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 5 cut(s) 21, 129, 389, 393, 394
BsmFI GGGAC 1 cut(s) 271
BsmI GAATGC 1 cut(s) 225
BsnI GGCC 4 cut(s) 90, 194, 212, 352
BsoBI CYCGRG 2 cut(s) 275, 388
Bsp120I GGGCCC 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 196
Bsp143I GATC 5 cut(s) 32, 76, 97, 182, 300
BspACI CCGC 4 cut(s) 186, 188, 251, 374
BspANI GGCC 4 cut(s) 90, 194, 212, 352
BspCNI CTCAG 1 cut(s) 55
BspDI ATCGAT 1 cut(s) 75
BspFNI CGCG 1 cut(s) 188
BspLI GGNNCC 5 cut(s) 121, 184, 193, 194, 259
BspMI ACCTGC 1 cut(s) 318
BspPI GGATC 3 cut(s) 40, 177, 190
BsrI ACTGG 3 cut(s) 43, 133, 375
BssECI CCNNGG 9 cut(s) 15, 186, 195, 219, 236, 275, 387, 388, 389
BssMI GATC 5 cut(s) 32, 76, 97, 182, 300
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 219
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 2 cut(s) 16, 197
Bst4CI ACNGT 2 cut(s) 208, 262
BstC8I GCNNGC 1 cut(s) 60
BstDEI CTNAG 4 cut(s) 63, 85, 347, 356
BstDSI CCRYGG 1 cut(s) 186
BstF5I GGATG 2 cut(s) 259, 367
BstFNI CGCG 1 cut(s) 188
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 1 cut(s) 403
BstKTI GATC 5 cut(s) 35, 79, 100, 185, 303
BstMBI GATC 5 cut(s) 32, 76, 97, 182, 300
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 2 cut(s) 59, 383
BstNI CCWGG 2 cut(s) 16, 197
BstSCI CCNGG 8 cut(s) 14, 53, 90, 195, 274, 275, 387, 388
BstSLI GKGCMC 1 cut(s) 196
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 390
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 182
BstYI RGATCY 1 cut(s) 182
Bsu15I ATCGAT 1 cut(s) 75
BsuI GTATCC 2 cut(s) 19, 321
BsuRI GGCC 4 cut(s) 90, 194, 212, 352
BsuTUI ATCGAT 1 cut(s) 75
BtgI CCRYGG 1 cut(s) 186
BtsCI GGATG 2 cut(s) 259, 367
BtsIMutI CAGTG 1 cut(s) 213
BveI ACCTGC 1 cut(s) 318
Cac8I GCNNGC 1 cut(s) 60
CfoI GCGC 1 cut(s) 403
Cfr13I GGNCC 4 cut(s) 120, 192, 193, 258
Cfr42I CCGCGG 1 cut(s) 189
Cfr9I CCCGGG 2 cut(s) 275, 388
ClaI ATCGAT 1 cut(s) 75
Csp6I GTAC 3 cut(s) 40, 82, 241
CspCI CAANNNNNGTGG 2 cut(s) 302, 337
CviJI RGCY 8 cut(s) 14, 62, 90, 194, 212, 235, 346, 352
CviKI_1 RGCY 8 cut(s) 14, 62, 90, 194, 212, 235, 346, 352
CviQI GTAC 3 cut(s) 40, 82, 241
DdeI CTNAG 4 cut(s) 63, 85, 347, 356
DpnI GATC 5 cut(s) 34, 78, 99, 184, 302
DpnII GATC 5 cut(s) 32, 76, 97, 182, 300
EaeI YGGCCR 1 cut(s) 210
Eco130I CCWWGG 1 cut(s) 219
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 196
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 2 cut(s) 120, 258
Eco88I CYCGRG 2 cut(s) 275, 388
EcoO109I RGGNCCY 3 cut(s) 120, 192, 193
EcoRII CCWGG 2 cut(s) 14, 195
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 1 cut(s) 219
EcoT38I GRGCYC 1 cut(s) 196
ErhI CCWWGG 1 cut(s) 219
FaiI YATR 2 cut(s) 265, 287
FaqI GGGAC 1 cut(s) 271
FauI CCCGC 1 cut(s) 181
Fnu4HI GCNGC 2 cut(s) 375, 404
FokI GGATG 2 cut(s) 266, 374
FriOI GRGCYC 1 cut(s) 196
Fsp4HI GCNGC 2 cut(s) 375, 404
GlaI GCGC 1 cut(s) 402
GluI GCNGC 2 cut(s) 375, 404
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 4 cut(s) 90, 194, 212, 352
HapII CCGG 5 cut(s) 55, 91, 276, 332, 389
HhaI GCGC 1 cut(s) 403
Hin6I GCGC 1 cut(s) 401
HinP1I GCGC 1 cut(s) 401
HinfI GANTC 3 cut(s) 5, 155, 379
HpaII CCGG 5 cut(s) 55, 91, 276, 332, 389
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 1 cut(s) 243
Hpy188I TCNGA 3 cut(s) 10, 160, 231
Hpy8I GTNNAC 1 cut(s) 243
Hpy99I CGWCG 3 cut(s) 40, 164, 272
HpyAV CCTTC 1 cut(s) 289
HpyCH4III ACNGT 2 cut(s) 208, 262
HpyCH4V TGCA 2 cut(s) 313, 406
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 383
HpyF3I CTNAG 4 cut(s) 63, 85, 347, 356
HspAI GCGC 1 cut(s) 401
KspI CCGCGG 1 cut(s) 189
Kzo9I GATC 5 cut(s) 32, 76, 97, 182, 300
LmnI GCTCC 1 cut(s) 343
Lsp1109I GCAGC 1 cut(s) 390
MaeIII GTNAC 1 cut(s) 202
MalI GATC 5 cut(s) 34, 78, 99, 184, 302
MboI GATC 5 cut(s) 32, 76, 97, 182, 300
MboII GAAGA 1 cut(s) 39
MfeI CAATTG 1 cut(s) 314
MflI RGATCY 1 cut(s) 182
MhlI GDGCHC 1 cut(s) 196
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 3 cut(s) 101, 314, 412
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 1 cut(s) 183
MnlI CCTC 8 cut(s) 58, 133, 145, 157, 169, 231, 331, 363
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 188
MspI CCGG 5 cut(s) 55, 91, 276, 332, 389
MspR9I CCNGG 8 cut(s) 16, 55, 92, 197, 276, 277, 389, 390
MunI CAATTG 1 cut(s) 314
Mva1269I GAATGC 1 cut(s) 225
MvaI CCWGG 2 cut(s) 16, 197
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 2 cut(s) 59, 383
NciI CCSGG 6 cut(s) 55, 92, 276, 277, 389, 390
NdeII GATC 5 cut(s) 32, 76, 97, 182, 300
NlaIV GGNNCC 5 cut(s) 121, 184, 193, 194, 259
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 1 cut(s) 202
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 2 cut(s) 35, 122
PctI GAATGC 1 cut(s) 225
PfeI GAWTC 2 cut(s) 5, 379
PkrI GCNGC 2 cut(s) 376, 405
Ple19I CGATCG 1 cut(s) 79
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PpuMI RGGWCCY 1 cut(s) 120
Psp5II RGGWCCY 1 cut(s) 120
Psp6I CCWGG 2 cut(s) 14, 195
PspGI CCWGG 2 cut(s) 14, 195
PspN4I GGNNCC 5 cut(s) 121, 184, 193, 194, 259
PspOMI GGGCCC 1 cut(s) 192
PspPI GGNCC 4 cut(s) 120, 192, 193, 258
PspPPI RGGWCCY 1 cut(s) 120
PsuI RGATCY 1 cut(s) 182
PvuI CGATCG 1 cut(s) 79
RsaI GTAC 3 cut(s) 41, 83, 242
RsaNI GTAC 3 cut(s) 40, 82, 241
SacII CCGCGG 1 cut(s) 189
SatI GCNGC 2 cut(s) 375, 404
Sau3AI GATC 5 cut(s) 32, 76, 97, 182, 300
Sau96I GGNCC 4 cut(s) 120, 192, 193, 258
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 8 cut(s) 16, 55, 92, 197, 276, 277, 389, 390
SduI GDGCHC 1 cut(s) 196
SetI ASST 6 cut(s) 64, 69, 242, 312, 342, 348
Sfr303I CCGCGG 1 cut(s) 189
SgrBI CCGCGG 1 cut(s) 189
SinI GGWCC 2 cut(s) 120, 258
SmaI CCCGGG 2 cut(s) 277, 390
Sse9I AATT 3 cut(s) 101, 314, 412
SseBI AGGCCT 1 cut(s) 352
SsiI CCGC 4 cut(s) 186, 188, 251, 374
StuI AGGCCT 1 cut(s) 352
StyD4I CCNGG 8 cut(s) 14, 53, 90, 195, 274, 275, 387, 388
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 2 cut(s) 208, 262
TaqI TCGA 3 cut(s) 75, 125, 306
TasI AATT 3 cut(s) 101, 314, 412
TauI GCSGC 1 cut(s) 377
TfiI GAWTC 2 cut(s) 5, 379
TscAI CASTG 1 cut(s) 213
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 1 cut(s) 403
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 1 cut(s) 308
TspMI CCCGGG 2 cut(s) 275, 388
TspRI CASTG 1 cut(s) 213
VpaK11BI GGWCC 2 cut(s) 120, 258
XmaI CCCGGG 2 cut(s) 275, 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.