Rmu_sc0001849.1_g000075

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001849.1
OG0000087
Physical Location & Seq
Forward (+)
281936 .. 283937
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001849.1_g000075.1.cds

Sequence Viewer

Length: 1848 bp
atgaatgagatcatcgccatgcgactgaggtggggaataccggacccggtggagcttaggcctctccgggttggagagctggcagcgaatccttccccggggtgggtggcgctgcacaagaatcagttccaccaagggttatctctaccgctgccccggtgcctacagtatctgttacggatgctgaacctgtcaccggggcagttgaccccgaatgccattcgtcaaatatacagtatgatggccatgtgggacttgtgccaactagggtggccttccataaatgaatttcgtgcggtacacagggttctgtactcaaggaagttgtcttgtacgggtacggttacgtttgccgctagggattacgaaccactagttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtattcctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatctgaagtcgaaaggaagaggatagcccgggtatatgtcgtttggtcagagaaagagaggagctcttatagattcatccggcattctatactttataggctagggctagggtggctccccgtgaaagcgccaaagaggaaaccccggaaaggcaaagaggaagacagaatggatgatgctcagttgatggatatgctgatgggccagggggaagacgccctacacatcgatgtcgacctagggtcgaaaggtacgagtcggtcggttgaagagaccctactggagatcaccgatgagggatatggggaacctgatcctgatgctcccgtgacccaagttgtgcagccctctgttgccgacgtcatcacgatagatgataccgggacggggaagctatcggtccccgtgtctatttcctctcgctctgctgggagcgatgaggcattgcttcctggtgagaagaaaagatcccataggcaccggcatcgaagtgataagcaggaggtgacgtatactggcagggatgttcagggtttcggtgcgaagagacagaggaaagatcacccgggaccagagtcgtcgccttcgcttggcttattgtctcctgcccttctggtaatccccaagaagcccatcaagcagctgttgagtgagtacggggttgccgatgaaaagttcgtgcggtccatgcttggtgacctgaaggacattgacctcgaccgggtgcgggacaaggacaatacgccccaagagaatcgctgtcttgcccgggaatccatgatgtgggaacgtcttgtttcattctctgcactcttcagtgtgtacgcgattgacgccagcgaggaagatactcatcggaaggaggaggttagcaatctctccgggcacgtgaagtatctccatggcgataaggccaagctggagaaggagcgagactcattgaaggctgagatggccgcagctaagcagcggatcgcggagcttgagggtgaagtctctgaggtgcgggaagaggtgaaaaacgctcgggacttcgagaaaaaagctgcagagtctgccgggtcatggaaggagaaggcggactccctggaggatcgccttcccgcggagaggtacgaggctgtggaagagtacaagtcctccgaagagctcatcgctatgctaactgctcaagataaggctgtcatcatgaagttcaaggagtgggtggcggccggatacctagatgagactaaattcaggaggggtctccttgagaagaagaagaaagatcgggaggcggcggccaagtctggtgccggtgggtcccagagtaccggtggcgagcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

615

Amino Acids

69.5

Weight (kDa)

8.76

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 876
Acc65I GGTACC 1 cut(s) 476
AccB1I GGYRCC 4 cut(s) 159, 476, 990, 1808
AccB7I CCANNNNNTGG 1 cut(s) 1296
AccBSI CCGCTC 1 cut(s) 1840
AccI GTMKAC 2 cut(s) 747, 1025
AccII CGCG 3 cut(s) 1340, 1490, 1619
AclWI GGATC 4 cut(s) 821, 975, 1493, 1614
AcoI YGGCCR 4 cut(s) 243, 1467, 1725, 1797
AcsI RAATTY 2 cut(s) 287, 1748
AcuI CTGAAG 3 cut(s) 537, 1235, 1312
AcvI CACGTG 1 cut(s) 1402
AcyI GRCGYC 3 cut(s) 729, 873, 1347
AgeI ACCGGT 2 cut(s) 473, 1829
AgsI TTSAA 3 cut(s) 782, 1456, 1711
AhdI GACNNNNNGTC 1 cut(s) 754
AhlI ACTAGT 1 cut(s) 373
AjnI CCWGG 3 cut(s) 717, 964, 1599
Alw21I GWGCWC 2 cut(s) 578, 1665
Alw26I GTCTC 7 cut(s) 779, 1054, 1119, 1440, 1513, 1736, 1766
AlwI GGATC 4 cut(s) 821, 975, 1493, 1614
AlwNI CAGNNNCTG 2 cut(s) 172, 1568
Ama87I CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
AoxI GGCC 8 cut(s) 59, 243, 272, 715, 1425, 1467, 1725, 1797
ApeKI GCWGC 9 cut(s) 83, 112, 151, 466, 856, 1153, 1472, 1480, 1559
ApoI RAATTY 2 cut(s) 287, 1748
AsiGI ACCGGT 2 cut(s) 473, 1829
Asp700I GAANNNNTTC 1 cut(s) 125
Asp718I GGTACC 1 cut(s) 476
AspA2I CCTAGG 1 cut(s) 751
AspLEI GCGC 2 cut(s) 112, 643
AspS9I GGNCC 7 cut(s) 43, 496, 715, 913, 1082, 1197, 1818
AsuHPI GGTGA 8 cut(s) 186, 793, 980, 1030, 1067, 1220, 1514, 1540
AvaI CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
AvaII GGWCC 6 cut(s) 43, 496, 913, 1082, 1197, 1818
AvrII CCTAGG 1 cut(s) 751
BaeGI GKGCMC 1 cut(s) 1401
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 4 cut(s) 159, 476, 990, 1808
BanII GRGCYC 2 cut(s) 578, 1665
BarI GAAGNNNNNNTAC 4 cut(s) 717, 749, 774, 806
BbrPI CACGTG 1 cut(s) 1402
BbsI GAAGAC 2 cut(s) 681, 732
Bbv12I GWGCWC 2 cut(s) 578, 1665
BbvI GCAGC 9 cut(s) 95, 99, 138, 478, 868, 1165, 1484, 1492, 1546
BccI CCATC 5 cut(s) 235, 694, 706, 1154, 1459
BcgI CGANNNNNNTGC 2 cut(s) 980, 1014
BciT130I CCWGG 3 cut(s) 719, 966, 1601
BciVI GTATCC 1 cut(s) 1724
BcoDI GTCTC 7 cut(s) 779, 1054, 1119, 1440, 1513, 1736, 1766
BcuI ACTAGT 1 cut(s) 373
BfaI CTAG 8 cut(s) 266, 357, 374, 428, 614, 620, 752, 1736
BfmI CTRYAG 2 cut(s) 164, 1560
BfoI RGCGCY 2 cut(s) 113, 644
BfuI GTATCC 1 cut(s) 1724
BlnI CCTAGG 1 cut(s) 751
BlpI GCTNAGC 1 cut(s) 1476
Bme18I GGWCC 6 cut(s) 43, 496, 913, 1082, 1197, 1818
BmeRI GACNNNNNGTC 1 cut(s) 754
BmeT110I CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
BmgT120I GGNCC 7 cut(s) 43, 496, 715, 913, 1082, 1197, 1818
BmsI GCATC 4 cut(s) 171, 679, 823, 1006
BoxI GACNNNNGTC 1 cut(s) 1087
BpiI GAAGAC 2 cut(s) 681, 732
BplI GAGNNNNNCTC 4 cut(s) 560, 592, 1433, 1465
BpmI CTGGAG 3 cut(s) 815, 1454, 1622
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 1476
BpuEI CTTGAG 4 cut(s) 301, 1517, 1668, 1787
Bsa29I ATCGAT 1 cut(s) 741
BsaAI YACGTR 1 cut(s) 1402
BsaBI GATNNNNATC 1 cut(s) 1365
BsaHI GRCGYC 3 cut(s) 729, 873, 1347
BsaI GGTCTC 2 cut(s) 779, 1766
BsaWI WCCGGW 3 cut(s) 40, 473, 1829
BsaXI ACNNNNNCTCC 4 cut(s) 1007, 1037, 1637, 1667
Bse118I RCCGGY 4 cut(s) 473, 993, 1811, 1829
Bse1I ACTGG 3 cut(s) 499, 798, 1033
Bse3DI GCAATG 1 cut(s) 956
Bse8I GATNNNNATC 1 cut(s) 1365
BseBI CCWGG 3 cut(s) 719, 966, 1601
BseCI ATCGAT 1 cut(s) 741
BseGI GGATG 4 cut(s) 186, 588, 691, 1042
BseJI GATNNNNATC 1 cut(s) 1365
BseMI GCAATG 1 cut(s) 956
BseMII CTCAG 4 cut(s) 17, 707, 1452, 1503
BseNI ACTGG 3 cut(s) 499, 798, 1033
BseRI GAGGAG 2 cut(s) 586, 1391
BseSI GKGCMC 1 cut(s) 1401
BseX3I CGGCCG 1 cut(s) 1725
BseXI GCAGC 9 cut(s) 95, 99, 138, 478, 868, 1165, 1484, 1492, 1546
BseYI CCCAGC 2 cut(s) 431, 941
BsgI GTGCAG 3 cut(s) 98, 875, 1305
Bsh1236I CGCG 3 cut(s) 1340, 1490, 1619
Bsh1285I CGRYCG 3 cut(s) 776, 1234, 1728
BshFI GGCC 8 cut(s) 61, 245, 274, 717, 1427, 1469, 1727, 1799
BshNI GGYRCC 4 cut(s) 159, 476, 990, 1808
BshTI ACCGGT 2 cut(s) 473, 1829
BshVI ATCGAT 1 cut(s) 741
BsiEI CGRYCG 3 cut(s) 776, 1234, 1728
BsiHKAI GWGCWC 2 cut(s) 578, 1665
BsiHKCI CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
BslFI GGGAC 8 cut(s) 266, 509, 899, 910, 1095, 1256, 1556, 1804
BsmAI GTCTC 7 cut(s) 779, 1054, 1119, 1440, 1513, 1736, 1766
BsmFI GGGAC 8 cut(s) 266, 509, 899, 910, 1095, 1256, 1556, 1804
BsmI GAATGC 2 cut(s) 220, 595
BsnI GGCC 8 cut(s) 61, 245, 274, 717, 1427, 1469, 1727, 1799
Bso31I GGTCTC 2 cut(s) 779, 1766
BsoBI CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
Bsp1286I GDGCHC 3 cut(s) 578, 1401, 1665
Bsp143I GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
Bsp1720I GCTNAGC 1 cut(s) 1476
Bsp19I CCATGG 1 cut(s) 1414
BspANI GGCC 8 cut(s) 61, 245, 274, 717, 1427, 1469, 1727, 1799
BspCNI CTCAG 4 cut(s) 18, 706, 1453, 1504
BspDI ATCGAT 1 cut(s) 741
BspFNI CGCG 3 cut(s) 1340, 1490, 1619
BspHI TCATGA 1 cut(s) 1701
BspMAI CTGCAG 1 cut(s) 1564
BspPI GGATC 4 cut(s) 821, 975, 1493, 1614
BspQI GCTCTTC 1 cut(s) 1653
BspT107I GGYRCC 4 cut(s) 159, 476, 990, 1808
BspTNI GGTCTC 2 cut(s) 779, 1766
BsrBI CCGCTC 1 cut(s) 1840
BsrDI GCAATG 1 cut(s) 956
BsrFI RCCGGY 4 cut(s) 473, 993, 1811, 1829
BsrI ACTGG 3 cut(s) 499, 798, 1033
BssAI RCCGGY 4 cut(s) 473, 993, 1811, 1829
BssMI GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
BssNAI GTATAC 1 cut(s) 1026
BssNI GRCGYC 3 cut(s) 729, 873, 1347
BssT1I CCWWGG 3 cut(s) 133, 751, 1414
Bst1107I GTATAC 1 cut(s) 1026
Bst2UI CCWGG 3 cut(s) 719, 966, 1601
Bst4CI ACNGT 3 cut(s) 168, 236, 343
Bst6I CTCTTC 7 cut(s) 524, 777, 1052, 1331, 1518, 1635, 1653
BstACI GRCGYC 3 cut(s) 729, 873, 1347
BstAPI GCANNNNNTGC 1 cut(s) 1568
BstBAI YACGTR 1 cut(s) 1402
BstC8I GCNNGC 3 cut(s) 81, 1351, 1838
BstDEI CTNAG 6 cut(s) 26, 56, 693, 1461, 1476, 1512
BstDSI CCRYGG 2 cut(s) 1414, 1617
BstEII GGTNACC 1 cut(s) 1208
BstF5I GGATG 4 cut(s) 186, 588, 691, 1042
BstFNI CGCG 3 cut(s) 1340, 1490, 1619
BstH2I RGCGCY 2 cut(s) 113, 644
BstHHI GCGC 2 cut(s) 112, 643
BstKTI GATC 8 cut(s) 12, 801, 829, 983, 1075, 1488, 1609, 1786
BstMAI GTCTC 7 cut(s) 779, 1054, 1119, 1440, 1513, 1736, 1766
BstMBI GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
BstMCI CGRYCG 3 cut(s) 776, 1234, 1728
BstMWI GCNNNNNNNGC 6 cut(s) 625, 1150, 1201, 1346, 1466, 1568
BstNI CCWGG 3 cut(s) 719, 966, 1601
BstNSI RCATGY 1 cut(s) 388
BstPAI GACNNNNGTC 1 cut(s) 1087
BstPI GGTNACC 1 cut(s) 1208
BstSFI CTRYAG 2 cut(s) 164, 1560
BstSLI GKGCMC 1 cut(s) 1401
BstUI CGCG 3 cut(s) 1340, 1490, 1619
BstV1I GCAGC 9 cut(s) 95, 99, 138, 478, 868, 1165, 1484, 1492, 1546
BstV2I GAAGAC 2 cut(s) 681, 732
BstX2I RGATCY 1 cut(s) 980
BstYI RGATCY 1 cut(s) 980
BstZ17I GTATAC 1 cut(s) 1026
BstZI CGGCCG 1 cut(s) 1725
Bsu15I ATCGAT 1 cut(s) 741
BsuI GTATCC 1 cut(s) 1724
BsuRI GGCC 8 cut(s) 61, 245, 274, 717, 1427, 1469, 1727, 1799
BsuTUI ATCGAT 1 cut(s) 741
BtgI CCRYGG 2 cut(s) 1414, 1617
BtgZI GCGATG 2 cut(s) 963, 1651
BtsCI GGATG 4 cut(s) 186, 588, 691, 1042
BtsIMutI CAGTG 1 cut(s) 1336
Cac8I GCNNGC 3 cut(s) 81, 1351, 1838
CaiI CAGNNNCTG 2 cut(s) 172, 1568
CciI TCATGA 1 cut(s) 1701
CfoI GCGC 2 cut(s) 112, 643
Cfr10I RCCGGY 4 cut(s) 473, 993, 1811, 1829
Cfr13I GGNCC 7 cut(s) 43, 496, 715, 913, 1082, 1197, 1818
Cfr42I CCGCGG 1 cut(s) 1620
Cfr9I CCCGGG 4 cut(s) 97, 540, 1078, 1281
ClaI ATCGAT 1 cut(s) 741
CseI GACGC 2 cut(s) 737, 1355
CspAI ACCGGT 2 cut(s) 473, 1829
CspCI CAANNNNNGTGG 2 cut(s) 251, 286
CviAII CATG 8 cut(s) 19, 247, 385, 1201, 1291, 1415, 1578, 1702
DdeI CTNAG 6 cut(s) 26, 56, 693, 1461, 1476, 1512
DpnI GATC 8 cut(s) 11, 800, 828, 982, 1074, 1487, 1608, 1785
DpnII GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
DriI GACNNNNNGTC 1 cut(s) 754
EaeI YGGCCR 4 cut(s) 243, 1467, 1725, 1797
EagI CGGCCG 1 cut(s) 1725
Eam1104I CTCTTC 7 cut(s) 524, 777, 1052, 1331, 1518, 1635, 1653
Eam1105I GACNNNNNGTC 1 cut(s) 754
EarI CTCTTC 7 cut(s) 524, 777, 1052, 1331, 1518, 1635, 1653
EciI GGCGGA 1 cut(s) 1607
Ecl136II GAGCTC 2 cut(s) 576, 1663
EclXI CGGCCG 1 cut(s) 1725
Eco130I CCWWGG 3 cut(s) 133, 751, 1414
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 2 cut(s) 578, 1665
Eco31I GGTCTC 2 cut(s) 779, 1766
Eco47I GGWCC 6 cut(s) 43, 496, 913, 1082, 1197, 1818
Eco52I CGGCCG 1 cut(s) 1725
Eco53kI GAGCTC 2 cut(s) 576, 1663
Eco57I CTGAAG 3 cut(s) 537, 1235, 1312
Eco72I CACGTG 1 cut(s) 1402
Eco88I CYCGRG 5 cut(s) 97, 540, 1078, 1281, 1539
Eco91I GGTNACC 1 cut(s) 1208
EcoICRI GAGCTC 2 cut(s) 576, 1663
EcoO109I RGGNCCY 1 cut(s) 1818
EcoO65I GGTNACC 1 cut(s) 1208
EcoRII CCWGG 3 cut(s) 717, 964, 1599
EcoT14I CCWWGG 3 cut(s) 133, 751, 1414
EcoT38I GRGCYC 2 cut(s) 578, 1665
ErhI CCWWGG 3 cut(s) 133, 751, 1414
FaeI CATG 8 cut(s) 22, 250, 388, 1204, 1294, 1418, 1581, 1705
FaqI GGGAC 8 cut(s) 266, 509, 899, 910, 1095, 1256, 1556, 1804
FatI CATG 8 cut(s) 18, 246, 384, 1200, 1290, 1414, 1577, 1701
FauI CCCGC 3 cut(s) 1233, 1512, 1624
FblI GTMKAC 2 cut(s) 747, 1025
FokI GGATG 4 cut(s) 193, 575, 698, 1049
FriOI GRGCYC 2 cut(s) 578, 1665
FspBI CTAG 8 cut(s) 266, 357, 374, 428, 614, 620, 752, 1736
GlaI GCGC 2 cut(s) 111, 642
GsaI CCCAGC 2 cut(s) 435, 945
GsuI CTGGAG 3 cut(s) 815, 1454, 1622
HaeII RGCGCY 2 cut(s) 113, 644
HaeIII GGCC 8 cut(s) 61, 245, 274, 717, 1427, 1469, 1727, 1799
HgaI GACGC 2 cut(s) 737, 1355
HhaI GCGC 2 cut(s) 112, 643
Hin1I GRCGYC 3 cut(s) 729, 873, 1347
Hin1II CATG 8 cut(s) 22, 250, 388, 1204, 1294, 1418, 1581, 1705
Hin6I GCGC 2 cut(s) 110, 641
HinP1I GCGC 2 cut(s) 110, 641
HincII GTYRAC 2 cut(s) 207, 748
HindII GTYRAC 2 cut(s) 207, 748
HphI GGTGA 8 cut(s) 186, 793, 980, 1030, 1067, 1220, 1514, 1540
Hpy166II GTNNAC 5 cut(s) 207, 301, 748, 1026, 1336
Hpy188I TCNGA 5 cut(s) 517, 562, 1371, 1513, 1657
Hpy188III TCNNGA 8 cut(s) 830, 880, 1541, 1549, 1685, 1702, 1753, 1787
Hpy8I GTNNAC 5 cut(s) 207, 301, 748, 1026, 1336
Hpy99I CGWCG 2 cut(s) 875, 1096
HpyCH4III ACNGT 3 cut(s) 168, 236, 343
HpyCH4IV ACGT 5 cut(s) 347, 873, 1022, 1303, 1401
HpyCH4V TGCA 4 cut(s) 115, 856, 1322, 1562
HpyF10VI GCNNNNNNNGC 6 cut(s) 625, 1150, 1201, 1346, 1466, 1568
HpyF3I CTNAG 6 cut(s) 26, 56, 693, 1461, 1476, 1512
HpySE526I ACGT 5 cut(s) 347, 873, 1022, 1303, 1401
Hsp92I GRCGYC 3 cut(s) 729, 873, 1347
Hsp92II CATG 8 cut(s) 22, 250, 388, 1204, 1294, 1418, 1581, 1705
HspAI GCGC 2 cut(s) 110, 641
KflI GGGWCCC 1 cut(s) 1818
KpnI GGTACC 1 cut(s) 480
KspI CCGCGG 1 cut(s) 1620
Kzo9I GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
LguI GCTCTTC 1 cut(s) 1653
LmnI GCTCC 7 cut(s) 52, 573, 633, 841, 945, 1441, 1492
Lsp1109I GCAGC 9 cut(s) 95, 99, 138, 478, 868, 1165, 1484, 1492, 1546
LweI GCATC 4 cut(s) 171, 679, 823, 1006
MaeI CTAG 8 cut(s) 266, 357, 374, 428, 614, 620, 752, 1736
MaeII ACGT 5 cut(s) 347, 873, 1022, 1303, 1401
MaeIII GTNAC 7 cut(s) 174, 192, 343, 376, 841, 1018, 1208
MalI GATC 8 cut(s) 11, 800, 828, 982, 1074, 1487, 1608, 1785
MbiI CCGCTC 1 cut(s) 1840
MboI GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
MflI RGATCY 1 cut(s) 980
MhlI GDGCHC 3 cut(s) 578, 1401, 1665
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 3 cut(s) 287, 447, 1748
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 5 cut(s) 778, 1097, 1442, 1574, 1589
MmeI TCCRAC 1 cut(s) 52
Mox20I TGGCCA 1 cut(s) 245
MroXI GAANNNNTTC 1 cut(s) 125
MscI TGGCCA 1 cut(s) 245
MseI TTAA 1 cut(s) 450
MslI CAYNNNNRTG 4 cut(s) 17, 741, 1002, 1670
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 5 cut(s) 151, 469, 1156, 1483, 1619
Mva1269I GAATGC 2 cut(s) 220, 595
MvaI CCWGG 3 cut(s) 719, 966, 1601
MvnI CGCG 3 cut(s) 1340, 1490, 1619
MwoI GCNNNNNNNGC 6 cut(s) 625, 1150, 1201, 1346, 1466, 1568
NcoI CCATGG 1 cut(s) 1414
NdeII GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
NlaIII CATG 8 cut(s) 22, 250, 388, 1204, 1294, 1418, 1581, 1705
NmuCI GTSAC 4 cut(s) 192, 841, 1018, 1208
NspI RCATGY 1 cut(s) 388
PagI TCATGA 1 cut(s) 1701
PceI AGGCCT 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 1653
PcsI WCGNNNNNNNCGW 2 cut(s) 764, 1176
PctI GAATGC 2 cut(s) 220, 595
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 5 cut(s) 88, 121, 585, 1267, 1286
PflMI CCANNNNNTGG 1 cut(s) 1296
PinAI ACCGGT 2 cut(s) 473, 1829
PleI GAGTC 5 cut(s) 777, 1096, 1442, 1573, 1589
PmaCI CACGTG 1 cut(s) 1402
PmlI CACGTG 1 cut(s) 1402
PpsI GAGTC 5 cut(s) 777, 1096, 1442, 1573, 1589
Ppu21I YACGTR 1 cut(s) 1402
PpuMI RGGWCCY 1 cut(s) 1818
PshAI GACNNNNGTC 1 cut(s) 1087
Psp124BI GAGCTC 2 cut(s) 578, 1665
Psp5II RGGWCCY 1 cut(s) 1818
Psp6I CCWGG 3 cut(s) 717, 964, 1599
PspCI CACGTG 1 cut(s) 1402
PspEI GGTNACC 1 cut(s) 1208
PspFI CCCAGC 2 cut(s) 431, 941
PspGI CCWGG 3 cut(s) 717, 964, 1599
PspPI GGNCC 7 cut(s) 43, 496, 715, 913, 1082, 1197, 1818
PspPPI RGGWCCY 1 cut(s) 1818
PsrI GAACNNNNNNTAC 2 cut(s) 291, 323
PstI CTGCAG 1 cut(s) 1564
PstNI CAGNNNCTG 2 cut(s) 172, 1568
PsuI RGATCY 1 cut(s) 980
PvuII CAGCTG 2 cut(s) 469, 1156
RseI CAYNNNNRTG 4 cut(s) 17, 741, 1002, 1670
SacI GAGCTC 2 cut(s) 578, 1665
SacII CCGCGG 1 cut(s) 1620
SalI GTCGAC 1 cut(s) 746
SapI GCTCTTC 1 cut(s) 1653
SaqAI TTAA 1 cut(s) 450
Sau3AI GATC 8 cut(s) 9, 798, 826, 980, 1072, 1485, 1606, 1783
Sau96I GGNCC 7 cut(s) 43, 496, 715, 913, 1082, 1197, 1818
SchI GAGTC 5 cut(s) 778, 1097, 1442, 1574, 1589
SduI GDGCHC 3 cut(s) 578, 1401, 1665
SfaNI GCATC 4 cut(s) 171, 679, 823, 1006
SfcI CTRYAG 2 cut(s) 164, 1560
Sfr303I CCGCGG 1 cut(s) 1620
SgrBI CCGCGG 1 cut(s) 1620
SinI GGWCC 6 cut(s) 43, 496, 913, 1082, 1197, 1818
SmaI CCCGGG 4 cut(s) 99, 542, 1080, 1283
SmiMI CAYNNNNRTG 4 cut(s) 17, 741, 1002, 1670
SmlI CTYRAG 4 cut(s) 316, 1496, 1683, 1766
SmoI CTYRAG 4 cut(s) 316, 1496, 1683, 1766
SpeI ACTAGT 1 cut(s) 373
Sse9I AATT 3 cut(s) 287, 447, 1748
SseBI AGGCCT 1 cut(s) 61
SspMI CTAG 8 cut(s) 266, 357, 374, 428, 614, 620, 752, 1736
SstI GAGCTC 2 cut(s) 578, 1665
StuI AGGCCT 1 cut(s) 61
StyI CCWWGG 3 cut(s) 133, 751, 1414
TaaI ACNGT 3 cut(s) 168, 236, 343
TaiI ACGT 5 cut(s) 350, 876, 1025, 1306, 1404
TaqI TCGA 8 cut(s) 395, 522, 741, 747, 758, 1000, 1230, 1548
TaqII GACCGA 2 cut(s) 762, 901
TasI AATT 3 cut(s) 287, 447, 1748
TatI WGTACW 2 cut(s) 312, 1644
TauI GCSGC 5 cut(s) 356, 1472, 1727, 1796, 1799
TfiI GAWTC 5 cut(s) 88, 121, 585, 1267, 1286
Tru1I TTAA 1 cut(s) 450
Tru9I TTAA 1 cut(s) 450
TscAI CASTG 1 cut(s) 1336
TseFI GTSAC 4 cut(s) 192, 841, 1018, 1208
TseI GCWGC 9 cut(s) 83, 112, 151, 466, 856, 1153, 1472, 1480, 1559
Tsp45I GTSAC 4 cut(s) 192, 841, 1018, 1208
TspDTI ATGAA 6 cut(s) 17, 300, 577, 1197, 1302, 1718
TspGWI ACGGA 1 cut(s) 193
TspMI CCCGGG 4 cut(s) 97, 540, 1078, 1281
TspRI CASTG 1 cut(s) 1336
Van91I CCANNNNNTGG 1 cut(s) 1296
VpaK11BI GGWCC 6 cut(s) 43, 496, 913, 1082, 1197, 1818
XapI RAATTY 2 cut(s) 287, 1748
XceI RCATGY 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 1 cut(s) 1829
XmaI CCCGGG 4 cut(s) 97, 540, 1078, 1281
XmaJI CCTAGG 1 cut(s) 751
XmiI GTMKAC 2 cut(s) 747, 1025
XmnI GAANNNNTTC 1 cut(s) 125
XspI CTAG 8 cut(s) 266, 357, 374, 428, 614, 620, 752, 1736
ZraI GACGTC 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.