Rmu_sc0001700.1_g000026

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001700.1
OG0000087
Physical Location & Seq
Reverse (-)
119495 .. 122103
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001700.1_g000026.1.cds

Sequence Viewer

Length: 1176 bp
atggacatcgaccggtacctaggccgggtagaccaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatctgcggaggccccggtagttacagtggccattcccgagggcattccgaagccaaggtacacacttgtggacgggaccgtatgcgatgaacttgggagaagcatgacgatgaaggagatagtagacatgcggctgaagtggggcagccagggagaagatgccctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtctatcgaagagaccctgttggggataactgatgagggatacggtgaacctgatcccgacgcccctatgacccatgccgcgcagccctccatggccgatgtcattacgatagctgacaccgggggatggggaactggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaaaggttatcgctacccctgccccagtgcctacagtatctgttgcggatgctgaacctgtcaccggggcagctaaccccgaatgccgttcgccaaatatacagtatgatggccatgcgggacctgtgccagcaagggcactcttcaatgtgtacgccatctacgccagcgaggaagatactcatctgaaggaggaggttagcaaactctccgggcaggtgaagtatcttcatggagagaaggccaagctggagaaggagcgggactcattgagggctgagatggccacctctaagcagtggattgtggagcttgagggtgaggtttctgaggcgcgggaggaggtcaagaacgcccgggactctgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagactctctggaggatcgccttcccgcggagaggcacgaggccgcggaggagtacaagtcctcggatgagcttatcgctatgctggctgctccccaagataaggctgtcatcatgaagtataaggagtgggtggcggccgggtacttagatgaagccaaatttaggcggggtctcctggagaaaaggaagaaggagcgggaggcggcggtcaagtccggtgccggtgggtctcagagtaccgatggagatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

391

Amino Acids

41.97

Weight (kDa)

4.77

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 715
AatII GACGTC 1 cut(s) 294
Acc36I ACCTGC 1 cut(s) 715
Acc65I GGTACC 1 cut(s) 15
AccB1I GGYRCC 2 cut(s) 15, 1136
AccBSI CCGCTC 2 cut(s) 769, 1114
AccI GTMKAC 3 cut(s) 30, 240, 294
AccII CGCG 4 cut(s) 401, 844, 944, 962
AclWI GGATC 3 cut(s) 124, 368, 939
AcoI YGGCCR 6 cut(s) 144, 414, 457, 619, 792, 1053
AcsI RAATTY 1 cut(s) 1076
AcuI CTGAAG 2 cut(s) 272, 716
AcyI GRCGYC 2 cut(s) 291, 381
AfaI GTAC 6 cut(s) 17, 176, 662, 971, 1061, 1156
AgeI ACCGGT 1 cut(s) 12
AgsI TTSAA 1 cut(s) 655
AhdI GACNNNNNGTC 1 cut(s) 301
AjnI CCWGG 2 cut(s) 264, 1092
AleI CACNNNNGTG 1 cut(s) 182
AloI GAACNNNNNNTCC 2 cut(s) 38, 70
AluBI AGCT 6 cut(s) 434, 503, 581, 757, 820, 988
AluI AGCT 6 cut(s) 434, 503, 581, 757, 820, 988
Alw26I GTCTC 4 cut(s) 326, 904, 1094, 1152
AlwI GGATC 3 cut(s) 124, 368, 939
AlwNI CAGNNNCTG 2 cut(s) 548, 893
Ama87I CYCGRG 3 cut(s) 152, 473, 864
ApeKI GCWGC 6 cut(s) 261, 403, 488, 578, 884, 1004
ApoI RAATTY 1 cut(s) 1076
AsiGI ACCGGT 1 cut(s) 12
Asp718I GGTACC 1 cut(s) 15
AspA2I CCTAGG 2 cut(s) 19, 298
AspLEI GCGC 3 cut(s) 403, 488, 844
AspS9I GGNCC 4 cut(s) 54, 127, 192, 629
AsuHPI GGTGA 5 cut(s) 113, 377, 562, 739, 839
AvaI CYCGRG 3 cut(s) 152, 473, 864
AvaII GGWCC 3 cut(s) 54, 192, 629
AvrII CCTAGG 2 cut(s) 19, 298
BaeGI GKGCMC 1 cut(s) 649
BalI TGGCCA 3 cut(s) 146, 621, 794
BanI GGYRCC 2 cut(s) 15, 1136
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 3 cut(s) 313, 492, 953
BbvI GCAGC 6 cut(s) 273, 415, 475, 590, 871, 991
BccI CCATC 5 cut(s) 441, 611, 674, 784, 1154
BceAI ACGGC 2 cut(s) 579, 881
BciT130I CCWGG 2 cut(s) 266, 1094
BciVI GTATCC 1 cut(s) 353
BcoDI GTCTC 4 cut(s) 326, 904, 1094, 1152
BfaI CTAG 2 cut(s) 20, 299
BfmI CTRYAG 2 cut(s) 540, 885
BfoI RGCGCY 1 cut(s) 489
BfuAI ACCTGC 1 cut(s) 715
BfuI GTATCC 1 cut(s) 353
BlnI CCTAGG 2 cut(s) 19, 298
Bme18I GGWCC 3 cut(s) 54, 192, 629
BmeRI GACNNNNNGTC 1 cut(s) 301
BmeT110I CYCGRG 3 cut(s) 152, 473, 864
BmgT120I GGNCC 4 cut(s) 54, 127, 192, 629
BmiI GGNNCC 6 cut(s) 17, 55, 129, 193, 630, 1138
BmrI ACTGGG 2 cut(s) 72, 527
BmsI GCATC 2 cut(s) 265, 547
BmuI ACTGGG 2 cut(s) 72, 527
BplI GAGNNNNNCTC 2 cut(s) 758, 790
BpmI CTGGAG 3 cut(s) 779, 947, 1115
BpuEI CTTGAG 1 cut(s) 842
BsaBI GATNNNNATC 2 cut(s) 690, 1164
BsaHI GRCGYC 2 cut(s) 291, 381
BsaI GGTCTC 3 cut(s) 326, 1094, 1152
BsaWI WCCGGW 2 cut(s) 12, 1133
BsaXI ACNNNNNCTCC 2 cut(s) 959, 989
Bse118I RCCGGY 2 cut(s) 12, 1139
Bse1I ACTGG 3 cut(s) 67, 460, 533
Bse8I GATNNNNATC 2 cut(s) 690, 1164
BseBI CCWGG 2 cut(s) 266, 1094
BseGI GGATG 3 cut(s) 452, 562, 988
BseJI GATNNNNATC 2 cut(s) 690, 1164
BseMII CTCAG 4 cut(s) 777, 828, 864, 1163
BseNI ACTGG 3 cut(s) 67, 460, 533
BseRI GAGGAG 3 cut(s) 716, 863, 980
BseSI GKGCMC 1 cut(s) 649
BseX3I CGGCCG 1 cut(s) 1053
BseXI GCAGC 6 cut(s) 273, 415, 475, 590, 871, 991
BsgI GTGCAG 2 cut(s) 266, 474
Bsh1236I CGCG 4 cut(s) 401, 844, 944, 962
Bsh1285I CGRYCG 2 cut(s) 13, 1056
BshNI GGYRCC 2 cut(s) 15, 1136
BshTI ACCGGT 1 cut(s) 12
BsiEI CGRYCG 2 cut(s) 13, 1056
BsiHKCI CYCGRG 3 cut(s) 152, 473, 864
BslFI GGGAC 4 cut(s) 205, 642, 785, 881
BsmAI GTCTC 4 cut(s) 326, 904, 1094, 1152
BsmBI CGTCTC 1 cut(s) 904
BsmFI GGGAC 4 cut(s) 205, 642, 785, 881
BsmI GAATGC 2 cut(s) 159, 596
Bso31I GGTCTC 3 cut(s) 326, 1094, 1152
BsoBI CYCGRG 3 cut(s) 152, 473, 864
Bsp1286I GDGCHC 1 cut(s) 649
Bsp143I GATC 4 cut(s) 116, 373, 931, 1165
Bsp19I CCATGG 1 cut(s) 411
BspCNI CTCAG 4 cut(s) 778, 829, 865, 1162
BspFNI CGCG 4 cut(s) 401, 844, 944, 962
BspHI TCATGA 1 cut(s) 1029
BspLI GGNNCC 6 cut(s) 17, 55, 129, 193, 630, 1138
BspMAI CTGCAG 1 cut(s) 889
BspMI ACCTGC 1 cut(s) 715
BspPI GGATC 3 cut(s) 124, 368, 939
BspT107I GGYRCC 2 cut(s) 15, 1136
BspTNI GGTCTC 3 cut(s) 326, 1094, 1152
BsrBI CCGCTC 2 cut(s) 769, 1114
BsrFI RCCGGY 2 cut(s) 12, 1139
BsrI ACTGG 3 cut(s) 67, 460, 533
BssAI RCCGGY 2 cut(s) 12, 1139
BssMI GATC 4 cut(s) 116, 373, 931, 1165
BssNI GRCGYC 2 cut(s) 291, 381
BssSI CACGAG 3 cut(s) 313, 492, 953
BssT1I CCWWGG 4 cut(s) 19, 170, 298, 411
Bst2BI CACGAG 3 cut(s) 313, 492, 953
Bst2UI CCWGG 2 cut(s) 266, 1094
Bst4CI ACNGT 5 cut(s) 142, 196, 365, 544, 612
Bst6I CTCTTC 2 cut(s) 324, 656
BstACI GRCGYC 2 cut(s) 291, 381
BstAPI GCANNNNNTGC 2 cut(s) 468, 893
BstC8I GCNNGC 3 cut(s) 639, 676, 1002
BstDEI CTNAG 6 cut(s) 786, 801, 837, 873, 1063, 1149
BstDSI CCRYGG 3 cut(s) 411, 942, 960
BstF5I GGATG 3 cut(s) 452, 562, 988
BstFNI CGCG 4 cut(s) 401, 844, 944, 962
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 3 cut(s) 403, 488, 844
BstKTI GATC 4 cut(s) 119, 376, 934, 1168
BstMAI GTCTC 4 cut(s) 326, 904, 1094, 1152
BstMBI GATC 4 cut(s) 116, 373, 931, 1165
BstMCI CGRYCG 2 cut(s) 13, 1056
BstMWI GCNNNNNNNGC 6 cut(s) 468, 527, 671, 791, 893, 1001
BstNI CCWGG 2 cut(s) 266, 1094
BstNSI RCATGY 1 cut(s) 247
BstSFI CTRYAG 2 cut(s) 540, 885
BstSLI GKGCMC 1 cut(s) 649
BstUI CGCG 4 cut(s) 401, 844, 944, 962
BstV1I GCAGC 6 cut(s) 273, 415, 475, 590, 871, 991
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BstZI CGGCCG 1 cut(s) 1053
BsuI GTATCC 1 cut(s) 353
BtgI CCRYGG 3 cut(s) 411, 942, 960
BtgZI GCGATG 1 cut(s) 216
BtsCI GGATG 3 cut(s) 452, 562, 988
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 3 cut(s) 147, 540, 812
BveI ACCTGC 1 cut(s) 715
Cac8I GCNNGC 3 cut(s) 639, 676, 1002
CaiI CAGNNNCTG 2 cut(s) 548, 893
CciI TCATGA 1 cut(s) 1029
CfoI GCGC 3 cut(s) 403, 488, 844
Cfr10I RCCGGY 2 cut(s) 12, 1139
Cfr13I GGNCC 4 cut(s) 54, 127, 192, 629
Cfr42I CCGCGG 2 cut(s) 945, 963
Cfr9I CCCGGG 2 cut(s) 473, 864
CseI GACGC 1 cut(s) 389
Csp6I GTAC 6 cut(s) 16, 175, 661, 970, 1060, 1155
CspAI ACCGGT 1 cut(s) 12
CviAII CATG 8 cut(s) 220, 244, 395, 412, 623, 740, 903, 1030
CviQI GTAC 6 cut(s) 16, 175, 661, 970, 1060, 1155
DdeI CTNAG 6 cut(s) 786, 801, 837, 873, 1063, 1149
DpnI GATC 4 cut(s) 118, 375, 933, 1167
DpnII GATC 4 cut(s) 116, 373, 931, 1165
DriI GACNNNNNGTC 1 cut(s) 301
EaeI YGGCCR 6 cut(s) 144, 414, 457, 619, 792, 1053
EagI CGGCCG 1 cut(s) 1053
Eam1104I CTCTTC 2 cut(s) 324, 656
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 2 cut(s) 324, 656
EclXI CGGCCG 1 cut(s) 1053
Eco130I CCWWGG 4 cut(s) 19, 170, 298, 411
Eco31I GGTCTC 3 cut(s) 326, 1094, 1152
Eco47I GGWCC 3 cut(s) 54, 192, 629
Eco52I CGGCCG 1 cut(s) 1053
Eco57I CTGAAG 2 cut(s) 272, 716
Eco88I CYCGRG 3 cut(s) 152, 473, 864
EcoO109I RGGNCCY 3 cut(s) 54, 127, 629
EcoRII CCWGG 2 cut(s) 264, 1092
EcoT14I CCWWGG 4 cut(s) 19, 170, 298, 411
ErhI CCWWGG 4 cut(s) 19, 170, 298, 411
Esp3I CGTCTC 1 cut(s) 904
FaeI CATG 8 cut(s) 223, 247, 398, 415, 626, 743, 906, 1033
FaqI GGGAC 4 cut(s) 205, 642, 785, 881
FatI CATG 8 cut(s) 219, 243, 394, 411, 622, 739, 902, 1029
FauI CCCGC 6 cut(s) 619, 762, 837, 949, 1077, 1107
FblI GTMKAC 3 cut(s) 30, 240, 294
FokI GGATG 3 cut(s) 459, 569, 995
FspBI CTAG 2 cut(s) 20, 299
GlaI GCGC 3 cut(s) 402, 487, 843
GsuI CTGGAG 3 cut(s) 779, 947, 1115
HaeII RGCGCY 1 cut(s) 489
HgaI GACGC 1 cut(s) 389
HhaI GCGC 3 cut(s) 403, 488, 844
Hin1I GRCGYC 2 cut(s) 291, 381
Hin1II CATG 8 cut(s) 223, 247, 398, 415, 626, 743, 906, 1033
Hin6I GCGC 3 cut(s) 401, 486, 842
HinP1I GCGC 3 cut(s) 401, 486, 842
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 7 cut(s) 89, 316, 497, 773, 869, 890, 920
HphI GGTGA 5 cut(s) 113, 377, 562, 739, 839
Hpy166II GTNNAC 7 cut(s) 31, 177, 187, 241, 295, 368, 661
Hpy188I TCNGA 8 cut(s) 76, 94, 165, 696, 838, 874, 982, 1152
Hpy188III TCNNGA 5 cut(s) 152, 377, 856, 926, 1030
Hpy8I GTNNAC 7 cut(s) 31, 177, 187, 241, 295, 368, 661
Hpy99I CGWCG 4 cut(s) 98, 293, 296, 383
HpyAV CCTTC 8 cut(s) 223, 691, 742, 757, 901, 907, 947, 1102
HpyCH4III ACNGT 5 cut(s) 142, 196, 365, 544, 612
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 3 cut(s) 283, 491, 887
HpyF10VI GCNNNNNNNGC 6 cut(s) 468, 527, 671, 791, 893, 1001
HpyF3I CTNAG 6 cut(s) 786, 801, 837, 873, 1063, 1149
HpySE526I ACGT 1 cut(s) 291
Hsp92I GRCGYC 2 cut(s) 291, 381
Hsp92II CATG 8 cut(s) 223, 247, 398, 415, 626, 743, 906, 1033
HspAI GCGC 3 cut(s) 401, 486, 842
KpnI GGTACC 1 cut(s) 19
KspI CCGCGG 2 cut(s) 945, 963
Kzo9I GATC 4 cut(s) 116, 373, 931, 1165
LmnI GCTCC 5 cut(s) 508, 766, 817, 1012, 1111
Lsp1109I GCAGC 6 cut(s) 273, 415, 475, 590, 871, 991
LweI GCATC 2 cut(s) 265, 547
MaeI CTAG 2 cut(s) 20, 299
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 2 cut(s) 136, 568
MalI GATC 4 cut(s) 118, 375, 933, 1167
MbiI CCGCTC 2 cut(s) 769, 1114
MboI GATC 4 cut(s) 116, 373, 931, 1165
MboII GAAGA 6 cut(s) 284, 341, 643, 695, 728, 1117
MflI RGATCY 1 cut(s) 116
MhlI GDGCHC 1 cut(s) 649
MlsI TGGCCA 3 cut(s) 146, 621, 794
MluCI AATT 2 cut(s) 35, 1076
MluNI TGGCCA 3 cut(s) 146, 621, 794
MlyI GAGTC 6 cut(s) 98, 325, 767, 863, 899, 914
MmeI TCCRAC 1 cut(s) 117
Mox20I TGGCCA 3 cut(s) 146, 621, 794
MscI TGGCCA 3 cut(s) 146, 621, 794
MslI CAYNNNNRTG 2 cut(s) 182, 224
Msp20I TGGCCA 3 cut(s) 146, 621, 794
MspA1I CMGCKG 2 cut(s) 944, 962
Mva1269I GAATGC 2 cut(s) 159, 596
MvaI CCWGG 2 cut(s) 266, 1094
MvnI CGCG 4 cut(s) 401, 844, 944, 962
MwoI GCNNNNNNNGC 6 cut(s) 468, 527, 671, 791, 893, 1001
NcoI CCATGG 1 cut(s) 411
NdeII GATC 4 cut(s) 116, 373, 931, 1165
NlaIII CATG 8 cut(s) 223, 247, 398, 415, 626, 743, 906, 1033
NlaIV GGNNCC 6 cut(s) 17, 55, 129, 193, 630, 1138
NmuCI GTSAC 1 cut(s) 568
NspI RCATGY 1 cut(s) 247
OliI CACNNNNGTG 1 cut(s) 182
PagI TCATGA 1 cut(s) 1029
PaqCI CACCTGC 1 cut(s) 715
PcsI WCGNNNNNNNCGW 2 cut(s) 56, 311
PctI GAATGC 2 cut(s) 159, 596
PfeI GAWTC 1 cut(s) 497
PfoI TCCNGGA 1 cut(s) 1092
PinAI ACCGGT 1 cut(s) 12
PleI GAGTC 6 cut(s) 97, 324, 767, 863, 898, 914
PpsI GAGTC 6 cut(s) 97, 324, 767, 863, 898, 914
PpuMI RGGWCCY 2 cut(s) 54, 629
Psp5II RGGWCCY 2 cut(s) 54, 629
Psp6I CCWGG 2 cut(s) 264, 1092
PspGI CCWGG 2 cut(s) 264, 1092
PspN4I GGNNCC 6 cut(s) 17, 55, 129, 193, 630, 1138
PspPI GGNCC 4 cut(s) 54, 127, 192, 629
PspPPI RGGWCCY 2 cut(s) 54, 629
PstI CTGCAG 1 cut(s) 889
PstNI CAGNNNCTG 2 cut(s) 548, 893
PsuI RGATCY 1 cut(s) 116
RsaI GTAC 6 cut(s) 17, 176, 662, 971, 1061, 1156
RsaNI GTAC 6 cut(s) 16, 175, 661, 970, 1060, 1155
RseI CAYNNNNRTG 2 cut(s) 182, 224
SacII CCGCGG 2 cut(s) 945, 963
SalI GTCGAC 1 cut(s) 293
Sau3AI GATC 4 cut(s) 116, 373, 931, 1165
Sau96I GGNCC 4 cut(s) 54, 127, 192, 629
SchI GAGTC 6 cut(s) 98, 325, 767, 863, 899, 914
SduI GDGCHC 1 cut(s) 649
SfaNI GCATC 2 cut(s) 265, 547
SfcI CTRYAG 2 cut(s) 540, 885
Sfr303I CCGCGG 2 cut(s) 945, 963
SgrBI CCGCGG 2 cut(s) 945, 963
SinI GGWCC 3 cut(s) 54, 192, 629
SmaI CCCGGG 2 cut(s) 475, 866
SmiMI CAYNNNNRTG 2 cut(s) 182, 224
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
Sse9I AATT 2 cut(s) 35, 1076
SspMI CTAG 2 cut(s) 20, 299
StyI CCWWGG 4 cut(s) 19, 170, 298, 411
TaaI ACNGT 5 cut(s) 142, 196, 365, 544, 612
TaiI ACGT 1 cut(s) 294
TaqI TCGA 6 cut(s) 9, 59, 288, 294, 305, 327
TaqII GACCGA 1 cut(s) 309
TasI AATT 2 cut(s) 35, 1076
TatI WGTACW 1 cut(s) 969
TauI GCSGC 6 cut(s) 250, 401, 462, 962, 1055, 1124
TfiI GAWTC 1 cut(s) 497
TscAI CASTG 3 cut(s) 147, 540, 812
TseFI GTSAC 1 cut(s) 568
TseI GCWGC 6 cut(s) 261, 403, 488, 578, 884, 1004
Tsp45I GTSAC 1 cut(s) 568
TspDTI ATGAA 5 cut(s) 219, 242, 728, 1046, 1083
TspMI CCCGGG 2 cut(s) 473, 864
TspRI CASTG 3 cut(s) 147, 540, 812
VpaK11BI GGWCC 3 cut(s) 54, 192, 629
XapI RAATTY 1 cut(s) 1076
XceI RCATGY 1 cut(s) 247
XmaI CCCGGG 2 cut(s) 473, 864
XmaJI CCTAGG 2 cut(s) 19, 298
XmiI GTMKAC 3 cut(s) 30, 240, 294
XspI CTAG 2 cut(s) 20, 299
ZraI GACGTC 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.