Rmu_sc0003781.1_g000021

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003781.1
OG0000087
Physical Location & Seq
Forward (+)
65594 .. 69748
4155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003781.1_g000021.1.cds

Sequence Viewer

Length: 2184 bp
atgcccgtcctttcacctgccaaagcttcgagaaatggggggaggcgaaggacacgtgtagcgatcctatggttgagggctcttcggctaacccttgtgcttctggttccagatatagcgagatttgaggtcctcggaaccgcagttaggatggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgaccggtacttaggccgagtagatcaattagcagagaacacgggatcctcaactagggtgttctcggagagtagtgaggagtccgacaagggtgagagcgagggtggatctgcggaggccccggtagtcacagtggccattcccgagggcatatcgaagccgaggtatacacttgcggatgggaccgtatgcgacgaacccgggagaagtatgacaatgaaggagatcatcgacatgagacttaagtgggggataccggacgcggtagatcttaggcctctcagggatggagagatggccgtgaaccctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtatctgctgcgaatgctgaacctgtccccggggcagctgaccccgaatgtacagtatgatggctatgtgggacttgtgccaaaaagggtggccttccataaacgaattccgcgcggtacatcggtgaaaccaccgaagaggaaaccccggaaaggcaaggaggaggacagaatggatgatgcccaattgatggatatgctgatgggccagggggaagacgcctttcacatcgatgtcgacctagggtcgaaaggtacaagtcggtcaattgaagaaacccttctggagatcaccgatgagggatatggtgaacctgaccccgacgctcccatgacccacgtcgtgcagccctccatgaccgatgttatctcaatagatgacaccgggacgggaaaggtaccggcccacgtgcctatttcctctcgttccactgggagcgatgaggcgttgcttcctggtgagaagaagagatcccataggcaccggcatcgaagtgataaggaagtgacgtacactggctgggatgttcaaggttttggtgcgaagaggcagaagaaagatcacccgggactagagtcgtcgccttcgcttgccttgttatctcccgccattccggtaatccgcaagaagcccatcaagcagctgctgagtgagtacggggttgctgatgaaaagttcgtgcggtccatgcttggtgacctgaaggatattgacctcgactgggttcgggccaaggataatacgccccaggagaatcgccgtcttgcccgagagtcgatgatgcgggcactcttcaatgtgtacgccattgacgccagtgaggaagatactcatctgaaagaggaggttagcaatctcttcggacaaagctgggaatttgggcccgaaaagcccgaagaccgaaccggcccgtttgggatcggtttctatcgggtgaagtatcttcatggcgagaaggccaagctggagaatgagcgggactcattgaaggctgagatggccgccgctaagcagcggatcgcggagcttgagggtgaagtctctgaggcgcgggaagaggtaaaaaacgcccgggactccgagaaaaaagctgcagagtttgccgtgtcatggaaggagaaggtagaccacctggaggatcgccttcctgcggagaggtacgaggccgtggaggagtacaagtcctcggaaaagctcatcgctatgctggctgctgcccaagataaggctgttatcatgaaattcaaggagtgggtggcggtcggatatttagatgaagctaaatggtctcctggagaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccggtgggtcccagagtaccggtggcgagcgctaggacaagatgctcccggagctacttgtaatagtaccgtaggcgctgggaatccatggatgcctggaaacgaccccgttcatgtctcggatgaaaaaggttaccggacctacctcttgaatgatctcgtaagggcctgtccaggatggatccagtccccggggctctgggtagacttgcttcatgacccagtcccccaactttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

727

Amino Acids

80.95

Weight (kDa)

5.67

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 25
Acc36I ACCTGC 1 cut(s) 25
Acc65I GGTACC 1 cut(s) 1006
AccB1I GGYRCC 4 cut(s) 600, 1006, 1089, 1944
AccB7I CCANNNNNTGG 1 cut(s) 799
AccBSI CCGCTC 1 cut(s) 1585
AccI GTMKAC 4 cut(s) 392, 846, 1734, 2151
AccII CGCG 5 cut(s) 488, 721, 723, 1631, 1660
AcoI YGGCCR 3 cut(s) 360, 522, 1608
AcsI RAATTY 3 cut(s) 714, 1484, 1850
AcuI CTGAAG 2 cut(s) 234, 1331
AcvI CACGTG 2 cut(s) 56, 1018
AcyI GRCGYC 2 cut(s) 828, 1422
AdeI CACNNNGTG 1 cut(s) 952
AfeI AGCGCT 1 cut(s) 1977
AflII CTTAAG 1 cut(s) 467
AflIII ACRYGT 2 cut(s) 53, 55
AgeI ACCGGT 2 cut(s) 228, 1965
AgsI TTSAA 6 cut(s) 881, 1139, 1405, 1597, 1855, 2098
AhdI GACNNNNNGTC 1 cut(s) 853
AjiI CACGTC 1 cut(s) 949
AjnI CCWGG 9 cut(s) 164, 203, 816, 1063, 1356, 1740, 1900, 2041, 2119
AloI GAACNNNNNNTCC 2 cut(s) 254, 286
Alw26I GTCTC 4 cut(s) 457, 1654, 1902, 2068
AlwNI CAGNNNCTG 2 cut(s) 613, 1255
Ama87I CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
Aor51HI AGCGCT 1 cut(s) 1977
ApaI GGGCCC 1 cut(s) 1494
ApoI RAATTY 3 cut(s) 714, 1484, 1850
AsiGI ACCGGT 2 cut(s) 228, 1965
Asp700I GAANNNNTTC 1 cut(s) 888
Asp718I GGTACC 1 cut(s) 1006
AspA2I CCTAGG 1 cut(s) 850
AspLEI GCGC 5 cut(s) 553, 723, 1660, 1978, 2024
AvaI CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
AvaII GGWCC 5 cut(s) 130, 408, 1293, 1954, 2085
AvrII CCTAGG 1 cut(s) 850
BaeGI GKGCMC 2 cut(s) 1399, 1494
BaeI ACNNNNGTAYC 2 cut(s) 717, 750
BalI TGGCCA 1 cut(s) 362
BamHI GGATCC 2 cut(s) 269, 2127
BanI GGYRCC 4 cut(s) 600, 1006, 1089, 1944
BanII GRGCYC 3 cut(s) 82, 1494, 2145
BarI GAAGNNNNNNTAC 2 cut(s) 2142, 2174
BauI CACGAG 1 cut(s) 557
BbrPI CACGTG 2 cut(s) 56, 1018
BbsI GAAGAC 3 cut(s) 189, 831, 1512
BceAI ACGGC 4 cut(s) 509, 1353, 1697, 1760
BcgI CGANNNNNNTGC 4 cut(s) 1079, 1113, 1450, 1484
BciT130I CCWGG 9 cut(s) 166, 205, 818, 1065, 1358, 1742, 1902, 2043, 2121
BciVI GTATCC 2 cut(s) 169, 471
BcoDI GTCTC 4 cut(s) 457, 1654, 1902, 2068
BfaI CTAG 4 cut(s) 279, 851, 1181, 1979
BfmI CTRYAG 2 cut(s) 605, 1701
BfoI RGCGCY 3 cut(s) 554, 1979, 2025
BfrI CTTAAG 1 cut(s) 467
BfuAI ACCTGC 1 cut(s) 25
BfuI GTATCC 2 cut(s) 169, 471
BglII AGATCT 1 cut(s) 493
BlnI CCTAGG 1 cut(s) 850
BlpI GCTNAGC 1 cut(s) 1617
Bme18I GGWCC 5 cut(s) 130, 408, 1293, 1954, 2085
BmeRI GACNNNNNGTC 1 cut(s) 853
BmeT110I CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
BmgBI CACGTC 1 cut(s) 949
BmrI ACTGGG 3 cut(s) 1050, 1339, 2162
BmsI GCATC 5 cut(s) 778, 1105, 1380, 1978, 2028
BmuI ACTGGG 3 cut(s) 1050, 1339, 2162
BoxI GACNNNNGTC 2 cut(s) 947, 1183
BpiI GAAGAC 3 cut(s) 189, 831, 1512
BplI GAGNNNNNCTC 2 cut(s) 1574, 1606
BpmI CTGGAG 4 cut(s) 914, 1595, 1763, 1923
Bpu1102I GCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 1 cut(s) 1658
Bsa29I ATCGAT 1 cut(s) 840
BsaAI YACGTR 2 cut(s) 56, 1018
BsaBI GATNNNNATC 1 cut(s) 1440
BsaHI GRCGYC 2 cut(s) 828, 1422
BsaI GGTCTC 1 cut(s) 1902
BsaWI WCCGGW 5 cut(s) 228, 481, 1222, 1965, 2082
BsaXI ACNNNNNCTCC 2 cut(s) 1775, 1805
Bse118I RCCGGY 6 cut(s) 228, 1009, 1092, 1514, 1947, 1965
Bse1I ACTGG 7 cut(s) 193, 1045, 1129, 1334, 1425, 2131, 2168
Bse8I GATNNNNATC 1 cut(s) 1440
BseBI CCWGG 9 cut(s) 166, 205, 818, 1065, 1358, 1742, 1902, 2043, 2121
BseCI ATCGAT 1 cut(s) 840
BseGI GGATG 8 cut(s) 156, 409, 517, 790, 1138, 2043, 2074, 2129
BseJI GATNNNNATC 1 cut(s) 1440
BseMII CTCAG 4 cut(s) 520, 1247, 1593, 1644
BseNI ACTGG 7 cut(s) 193, 1045, 1129, 1334, 1425, 2131, 2168
BseRI GAGGAG 4 cut(s) 317, 785, 1466, 1796
BseSI GKGCMC 2 cut(s) 1399, 1494
BseYI CCCAGC 3 cut(s) 1128, 1479, 2024
BsgI GTGCAG 2 cut(s) 539, 974
Bsh1236I CGCG 5 cut(s) 488, 721, 723, 1631, 1660
Bsh1285I CGRYCG 2 cut(s) 229, 1872
BshNI GGYRCC 4 cut(s) 600, 1006, 1089, 1944
BshTI ACCGGT 2 cut(s) 228, 1965
BshVI ATCGAT 1 cut(s) 840
BsiEI CGRYCG 2 cut(s) 229, 1872
BsiHKCI CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
BsmAI GTCTC 4 cut(s) 457, 1654, 1902, 2068
BsmI GAATGC 1 cut(s) 627
Bso31I GGTCTC 1 cut(s) 1902
BsoBI CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
Bsp120I GGGCCC 1 cut(s) 1490
Bsp1286I GDGCHC 4 cut(s) 82, 1399, 1494, 2145
Bsp1407I TGTACA 1 cut(s) 658
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp19I CCATGG 1 cut(s) 2033
BspCNI CTCAG 4 cut(s) 519, 1248, 1594, 1645
BspDI ATCGAT 1 cut(s) 840
BspFNI CGCG 5 cut(s) 488, 721, 723, 1631, 1660
BspHI TCATGA 2 cut(s) 1845, 2161
BspMAI CTGCAG 1 cut(s) 1705
BspMI ACCTGC 1 cut(s) 25
BspQI GCTCTTC 1 cut(s) 87
BspT107I GGYRCC 4 cut(s) 600, 1006, 1089, 1944
BspTI CTTAAG 1 cut(s) 467
BspTNI GGTCTC 1 cut(s) 1902
BsrBI CCGCTC 1 cut(s) 1585
BsrFI RCCGGY 6 cut(s) 228, 1009, 1092, 1514, 1947, 1965
BsrGI TGTACA 1 cut(s) 658
BsrI ACTGG 7 cut(s) 193, 1045, 1129, 1334, 1425, 2131, 2168
BssAI RCCGGY 6 cut(s) 228, 1009, 1092, 1514, 1947, 1965
BssNAI GTATAC 1 cut(s) 393
BssNI GRCGYC 2 cut(s) 828, 1422
BssSI CACGAG 1 cut(s) 557
BssT1I CCWWGG 4 cut(s) 574, 850, 1341, 2033
Bst1107I GTATAC 1 cut(s) 393
Bst2BI CACGAG 1 cut(s) 557
Bst2UI CCWGG 9 cut(s) 166, 205, 818, 1065, 1358, 1742, 1902, 2043, 2121
Bst4CI ACNGT 5 cut(s) 358, 412, 609, 663, 2017
Bst6I CTCTTC 7 cut(s) 87, 740, 1070, 1148, 1406, 1472, 1659
BstACI GRCGYC 2 cut(s) 828, 1422
BstAFI CTTAAG 1 cut(s) 467
BstAPI GCANNNNNTGC 1 cut(s) 1709
BstAUI TGTACA 1 cut(s) 658
BstBAI YACGTR 2 cut(s) 56, 1018
BstC8I GCNNGC 5 cut(s) 210, 1200, 1395, 1818, 1974
BstDEI CTNAG 7 cut(s) 235, 497, 506, 1256, 1602, 1617, 1653
BstDSI CCRYGG 2 cut(s) 1776, 2033
BstEII GGTNACC 2 cut(s) 1304, 2078
BstENI CCTNNNNNAGG 1 cut(s) 277
BstF5I GGATG 8 cut(s) 156, 409, 517, 790, 1138, 2043, 2074, 2129
BstFNI CGCG 5 cut(s) 488, 721, 723, 1631, 1660
BstH2I RGCGCY 3 cut(s) 554, 1979, 2025
BstHHI GCGC 5 cut(s) 553, 723, 1660, 1978, 2024
BstMAI GTCTC 4 cut(s) 457, 1654, 1902, 2068
BstMCI CGRYCG 2 cut(s) 229, 1872
BstNI CCWGG 9 cut(s) 166, 205, 818, 1065, 1358, 1742, 1902, 2043, 2121
BstPAI GACNNNNGTC 2 cut(s) 947, 1183
BstPI GGTNACC 2 cut(s) 1304, 2078
BstSFI CTRYAG 2 cut(s) 605, 1701
BstSLI GKGCMC 2 cut(s) 1399, 1494
BstUI CGCG 5 cut(s) 488, 721, 723, 1631, 1660
BstV2I GAAGAC 3 cut(s) 189, 831, 1512
BstX2I RGATCY 5 cut(s) 269, 332, 493, 1079, 2127
BstYI RGATCY 5 cut(s) 269, 332, 493, 1079, 2127
BstZ17I GTATAC 1 cut(s) 393
Bsu15I ATCGAT 1 cut(s) 840
BsuI GTATCC 2 cut(s) 169, 471
BsuTUI ATCGAT 1 cut(s) 840
BtgI CCRYGG 2 cut(s) 1776, 2033
BtgZI GCGATG 2 cut(s) 1062, 1792
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 8 cut(s) 156, 409, 517, 790, 1138, 2043, 2074, 2129
BtsIMutI CAGTG 4 cut(s) 363, 1038, 1122, 1432
BveI ACCTGC 1 cut(s) 25
Cac8I GCNNGC 5 cut(s) 210, 1200, 1395, 1818, 1974
CaiI CAGNNNCTG 2 cut(s) 613, 1255
CciI TCATGA 2 cut(s) 1845, 2161
CfoI GCGC 5 cut(s) 553, 723, 1660, 1978, 2024
Cfr10I RCCGGY 6 cut(s) 228, 1009, 1092, 1514, 1947, 1965
Cfr9I CCCGGG 6 cut(s) 425, 538, 637, 1174, 1680, 2137
ClaI ATCGAT 1 cut(s) 840
CseI GACGC 4 cut(s) 494, 836, 941, 1430
CspAI ACCGGT 2 cut(s) 228, 1965
CspCI CAANNNNNGTGG 2 cut(s) 678, 713
DdeI CTNAG 7 cut(s) 235, 497, 506, 1256, 1602, 1617, 1653
DraIII CACNNNGTG 1 cut(s) 952
DriI GACNNNNNGTC 1 cut(s) 853
EaeI YGGCCR 3 cut(s) 360, 522, 1608
Eam1104I CTCTTC 7 cut(s) 87, 740, 1070, 1148, 1406, 1472, 1659
Eam1105I GACNNNNNGTC 1 cut(s) 853
EarI CTCTTC 7 cut(s) 87, 740, 1070, 1148, 1406, 1472, 1659
Eco130I CCWWGG 4 cut(s) 574, 850, 1341, 2033
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 3 cut(s) 82, 1494, 2145
Eco31I GGTCTC 1 cut(s) 1902
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 5 cut(s) 130, 408, 1293, 1954, 2085
Eco47III AGCGCT 1 cut(s) 1977
Eco57I CTGAAG 2 cut(s) 234, 1331
Eco72I CACGTG 2 cut(s) 56, 1018
Eco88I CYCGRG 8 cut(s) 368, 425, 538, 637, 1174, 1377, 1680, 2137
Eco91I GGTNACC 2 cut(s) 1304, 2078
EcoNI CCTNNNNNAGG 1 cut(s) 277
EcoO109I RGGNCCY 4 cut(s) 130, 343, 1954, 2112
EcoO65I GGTNACC 2 cut(s) 1304, 2078
EcoRI GAATTC 1 cut(s) 714
EcoRII CCWGG 9 cut(s) 164, 203, 816, 1063, 1356, 1740, 1900, 2041, 2119
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 4 cut(s) 574, 850, 1341, 2033
EcoT38I GRGCYC 3 cut(s) 82, 1494, 2145
ErhI CCWWGG 4 cut(s) 574, 850, 1341, 2033
FalI AAGNNNNNCTT 2 cut(s) 873, 905
FauI CCCGC 4 cut(s) 1222, 1386, 1578, 1653
FblI GTMKAC 4 cut(s) 392, 846, 1734, 2151
FokI GGATG 8 cut(s) 163, 416, 524, 797, 1145, 2050, 2081, 2136
FriOI GRGCYC 3 cut(s) 82, 1494, 2145
FspBI CTAG 4 cut(s) 279, 851, 1181, 1979
GlaI GCGC 5 cut(s) 552, 722, 1659, 1977, 2023
GsaI CCCAGC 3 cut(s) 1132, 1483, 2028
GsuI CTGGAG 4 cut(s) 914, 1595, 1763, 1923
HaeII RGCGCY 3 cut(s) 554, 1979, 2025
HgaI GACGC 4 cut(s) 494, 836, 941, 1430
HhaI GCGC 5 cut(s) 553, 723, 1660, 1978, 2024
Hin1I GRCGYC 2 cut(s) 828, 1422
Hin6I GCGC 5 cut(s) 551, 721, 1658, 1976, 2022
HinP1I GCGC 5 cut(s) 551, 721, 1658, 1976, 2022
HincII GTYRAC 1 cut(s) 847
HindII GTYRAC 1 cut(s) 847
HindIII AAGCTT 1 cut(s) 24
HinfI GANTC 9 cut(s) 155, 305, 562, 1184, 1363, 1382, 1589, 1685, 2029
Hpy166II GTNNAC 8 cut(s) 393, 529, 847, 920, 1122, 1411, 1735, 2152
Hpy188III TCNNGA 8 cut(s) 30, 110, 368, 893, 1846, 1923, 2095, 2162
Hpy8I GTNNAC 8 cut(s) 393, 529, 847, 920, 1122, 1411, 1735, 2152
Hpy99I CGWCG 5 cut(s) 190, 422, 935, 953, 1192
HpyCH4III ACNGT 5 cut(s) 358, 412, 609, 663, 2017
HpyCH4IV ACGT 4 cut(s) 55, 948, 1017, 1118
HpyCH4V TGCA 3 cut(s) 556, 955, 1703
HpyF3I CTNAG 7 cut(s) 235, 497, 506, 1256, 1602, 1617, 1653
HpySE526I ACGT 4 cut(s) 55, 948, 1017, 1118
Hsp92I GRCGYC 2 cut(s) 828, 1422
HspAI GCGC 5 cut(s) 551, 721, 1658, 1976, 2022
KflI GGGWCCC 1 cut(s) 1954
KpnI GGTACC 1 cut(s) 1010
LguI GCTCTTC 1 cut(s) 87
LmnI GCTCC 6 cut(s) 573, 940, 1044, 1633, 1996, 1997
LweI GCATC 5 cut(s) 778, 1105, 1380, 1978, 2028
MaeI CTAG 4 cut(s) 279, 851, 1181, 1979
MaeII ACGT 4 cut(s) 55, 948, 1017, 1118
MaeIII GTNAC 4 cut(s) 352, 1114, 1304, 2078
MbiI CCGCTC 1 cut(s) 1585
MfeI CAATTG 2 cut(s) 794, 876
MflI RGATCY 5 cut(s) 269, 332, 493, 1079, 2127
MhlI GDGCHC 4 cut(s) 82, 1399, 1494, 2145
MlsI TGGCCA 1 cut(s) 362
MluCI AATT 6 cut(s) 251, 714, 794, 876, 1484, 1850
MluNI TGGCCA 1 cut(s) 362
MlyI GAGTC 5 cut(s) 314, 1193, 1391, 1583, 1679
MmeI TCCRAC 2 cut(s) 333, 1852
Mox20I TGGCCA 1 cut(s) 362
MroXI GAANNNNTTC 1 cut(s) 888
MscI TGGCCA 1 cut(s) 362
MseI TTAA 2 cut(s) 468, 2182
MslI CAYNNNNRTG 4 cut(s) 458, 840, 1101, 1811
Msp20I TGGCCA 1 cut(s) 362
MspA1I CMGCKG 4 cut(s) 592, 646, 1252, 1624
MspCI CTTAAG 1 cut(s) 467
MunI CAATTG 2 cut(s) 794, 876
Mva1269I GAATGC 1 cut(s) 627
MvaI CCWGG 9 cut(s) 166, 205, 818, 1065, 1358, 1742, 1902, 2043, 2121
MvnI CGCG 5 cut(s) 488, 721, 723, 1631, 1660
NcoI CCATGG 1 cut(s) 2033
NmeAIII GCCGAG 2 cut(s) 266, 411
NmuCI GTSAC 3 cut(s) 352, 1114, 1304
PagI TCATGA 2 cut(s) 1845, 2161
PaqCI CACCTGC 1 cut(s) 25
PceI AGGCCT 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 87
PcsI WCGNNNNNNNCGW 1 cut(s) 185
PctI GAATGC 1 cut(s) 627
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 4 cut(s) 155, 562, 1363, 2029
PflFI GACNNNGTC 1 cut(s) 2168
PflMI CCANNNNNTGG 1 cut(s) 799
PfoI TCCNGGA 3 cut(s) 1900, 1993, 2119
PinAI ACCGGT 2 cut(s) 228, 1965
PleI GAGTC 5 cut(s) 313, 1192, 1390, 1583, 1679
PmaCI CACGTG 2 cut(s) 56, 1018
PmlI CACGTG 2 cut(s) 56, 1018
PpsI GAGTC 5 cut(s) 313, 1192, 1390, 1583, 1679
Ppu21I YACGTR 2 cut(s) 56, 1018
PpuMI RGGWCCY 2 cut(s) 130, 1954
PshAI GACNNNNGTC 2 cut(s) 947, 1183
Psp5II RGGWCCY 2 cut(s) 130, 1954
Psp6I CCWGG 9 cut(s) 164, 203, 816, 1063, 1356, 1740, 1900, 2041, 2119
PspCI CACGTG 2 cut(s) 56, 1018
PspEI GGTNACC 2 cut(s) 1304, 2078
PspFI CCCAGC 3 cut(s) 1128, 1479, 2024
PspGI CCWGG 9 cut(s) 164, 203, 816, 1063, 1356, 1740, 1900, 2041, 2119
PspOMI GGGCCC 1 cut(s) 1490
PspPPI RGGWCCY 2 cut(s) 130, 1954
PstI CTGCAG 1 cut(s) 1705
PstNI CAGNNNCTG 2 cut(s) 613, 1255
PsuI RGATCY 5 cut(s) 269, 332, 493, 1079, 2127
PsyI GACNNNGTC 1 cut(s) 2168
PvuII CAGCTG 2 cut(s) 646, 1252
RseI CAYNNNNRTG 4 cut(s) 458, 840, 1101, 1811
SalI GTCGAC 1 cut(s) 845
SapI GCTCTTC 1 cut(s) 87
SaqAI TTAA 2 cut(s) 468, 2182
SchI GAGTC 5 cut(s) 314, 1193, 1391, 1583, 1679
SduI GDGCHC 4 cut(s) 82, 1399, 1494, 2145
SfaNI GCATC 5 cut(s) 778, 1105, 1380, 1978, 2028
SfcI CTRYAG 2 cut(s) 605, 1701
SinI GGWCC 5 cut(s) 130, 408, 1293, 1954, 2085
SmaI CCCGGG 6 cut(s) 427, 540, 639, 1176, 1682, 2139
SmiMI CAYNNNNRTG 4 cut(s) 458, 840, 1101, 1811
SmlI CTYRAG 2 cut(s) 467, 1637
SmoI CTYRAG 2 cut(s) 467, 1637
Sse9I AATT 6 cut(s) 251, 714, 794, 876, 1484, 1850
SseBI AGGCCT 1 cut(s) 502
SspMI CTAG 4 cut(s) 279, 851, 1181, 1979
StuI AGGCCT 1 cut(s) 502
StyI CCWWGG 4 cut(s) 574, 850, 1341, 2033
TaaI ACNGT 5 cut(s) 358, 412, 609, 663, 2017
TaiI ACGT 4 cut(s) 58, 951, 1020, 1121
TaqII GACCGA 3 cut(s) 861, 983, 1524
TasI AATT 6 cut(s) 251, 714, 794, 876, 1484, 1850
TatI WGTACW 2 cut(s) 658, 1785
TauI GCSGC 3 cut(s) 1613, 1616, 1932
TfiI GAWTC 4 cut(s) 155, 562, 1363, 2029
Tru1I TTAA 2 cut(s) 468, 2182
Tru9I TTAA 2 cut(s) 468, 2182
TscAI CASTG 4 cut(s) 363, 1045, 1129, 1432
TseFI GTSAC 3 cut(s) 352, 1114, 1304
Tsp45I GTSAC 3 cut(s) 352, 1114, 1304
TspDTI ATGAA 8 cut(s) 458, 1293, 1544, 1862, 1899, 2048, 2085, 2150
TspMI CCCGGG 6 cut(s) 425, 538, 637, 1174, 1680, 2137
TspRI CASTG 4 cut(s) 363, 1045, 1129, 1432
Tth111I GACNNNGTC 1 cut(s) 2168
Van91I CCANNNNNTGG 1 cut(s) 799
Vha464I CTTAAG 1 cut(s) 467
VpaK11BI GGWCC 5 cut(s) 130, 408, 1293, 1954, 2085
XagI CCTNNNNNAGG 1 cut(s) 277
XapI RAATTY 3 cut(s) 714, 1484, 1850
XcmI CCANNNNNNNNNTGG 1 cut(s) 1965
XmaI CCCGGG 6 cut(s) 425, 538, 637, 1174, 1680, 2137
XmaJI CCTAGG 1 cut(s) 850
XmiI GTMKAC 4 cut(s) 392, 846, 1734, 2151
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 4 cut(s) 279, 851, 1181, 1979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.