Rmu_sc0003352.1_g000035

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003352.1
OG0000087
Physical Location & Seq
Forward (+)
165019 .. 167001
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003352.1_g000035.1.cds

Sequence Viewer

Length: 1698 bp
atgaaggagatcatcgccatgcgactgaagtggggaataccggacgcggtggagcttaggcctctcagagatggagagatggccgcgaatcctgccccgtggtgggtggcgctgcacgtgaatcagttccaccaggggttatctctaccgctgccacggtgcctacagtatctgttgcggatgctgaacctgtcaccggggcagttgaccccgaatgctattcgtcaaatatatagtatgatggccatttgggacttgtgccaacaagggtggccttccataaatgaattccgggtggtacacagggtcctgtactcaaggaagctgtcatgtgcgggtacggttacatttgccgctagggattacgaaccattagttaccgacatgccttcctcgatgagaaaaaggttgaggaacaaagtattcctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccagtcctatactctatccgaagtagaaaggaagaggatagctcgggtatatgccgtttggtcagagaaagagaggagctcttatagattcatccggcattctatactttataggctagggctaggatggctccccggtaaagaagaggacagaatggatgatgctcagttgatggatatgctgatgggccagggagaagacgcccttcacatcgatgtcgacctagggtcgaaaggtacgggtctgtccgttgaagagaccctactggagatcaccgatgagggatatggggaacctgatcctgacgctcccgtgacccaagtcgtgcagccctctgtggccgacgtcatcacgatagatgataccgggatcggaaaggtaccggcccccgtgtttatttcctctcgttctactgggagcgatgaggcatttcttcccggtgagaagaagagatcccataggcaccggcaccgaagtgataagcaggaggtgatgtataccgccaggatgttcagggattcggtgccaagaggcagaagaaagatcactagggacctgggtcttcgccttcgcttggcttgttgtctcctgccctttcgtgtcctgaaggacattgacctcgaccgggtgcgggccaaggacaatacgcccaaagagaatcgccgtctcgcccgggaatccatgatgcgggcactcttcaatgtgtacgcgattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctcagggcaggtgaagtatctgcatggcgagaaggccaagctggagaaggagcgggactcgttgaaggccgagatggccgcggctaagcagagaatcgtggagcttgagggtgaagtctctgaggcgcgggaagaggtgaaaagcgctcgggactctgagaaaaaagctacagagtctgccatttcatggaaggagaaggcagactacctggaggatcgccttcccgtggagaagcacgaggccgtggaggagtacaagtcctctcaagagctcattgctatgctaactgctgctcaagataaggctgtcattatgaagttcaaggagtgggtggcggccgggtacctggatgaagctaaattcaggcggggtcttctggagaaaaagaagaaagatcgggaggcggcggtcaagtctggtgccgatggcgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

565

Amino Acids

64.5

Weight (kDa)

8.76

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1258
AatII GACGTC 1 cut(s) 846
Acc36I ACCTGC 1 cut(s) 1258
Acc65I GGTACC 3 cut(s) 476, 877, 1602
AccB1I GGYRCC 8 cut(s) 159, 476, 877, 960, 966, 1021, 1602, 1679
AccB7I CCANNNNNTGG 1 cut(s) 1446
AccBSI CCGCTC 1 cut(s) 1312
AccI GTMKAC 2 cut(s) 717, 995
AccII CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
AclWI GGATC 4 cut(s) 791, 875, 945, 1482
AcoI YGGCCR 5 cut(s) 81, 243, 837, 1335, 1596
AcsI RAATTY 2 cut(s) 287, 1619
AcuI CTGAAG 3 cut(s) 47, 1124, 1259
AcvI CACGTG 1 cut(s) 118
AcyI GRCGYC 3 cut(s) 699, 843, 1215
AfaI GTAC 9 cut(s) 300, 314, 340, 478, 736, 879, 1205, 1514, 1604
AfeI AGCGCT 1 cut(s) 1405
AgeI ACCGGT 1 cut(s) 473
AgsI TTSAA 4 cut(s) 752, 1198, 1324, 1582
AhdI GACNNNNNGTC 1 cut(s) 724
AjnI CCWGG 6 cut(s) 132, 687, 1001, 1053, 1467, 1605
AleI CACNNNNGTG 1 cut(s) 972
Alw21I GWGCWC 2 cut(s) 578, 1533
Alw26I GTCTC 4 cut(s) 749, 1088, 1169, 1381
AlwI GGATC 4 cut(s) 791, 875, 945, 1482
AlwNI CAGNNNCTG 2 cut(s) 172, 1436
Ama87I CYCGRG 3 cut(s) 540, 1170, 1407
Aor51HI AGCGCT 1 cut(s) 1405
ApeKI GCWGC 5 cut(s) 112, 151, 466, 826, 1550
ApoI RAATTY 2 cut(s) 287, 1619
AsiGI ACCGGT 1 cut(s) 473
Asp700I GAANNNNTTC 1 cut(s) 125
Asp718I GGTACC 3 cut(s) 476, 877, 1602
AspA2I CCTAGG 1 cut(s) 721
AspLEI GCGC 3 cut(s) 112, 1387, 1406
AspS9I GGNCC 6 cut(s) 307, 496, 685, 883, 1051, 1131
AsuC2I CCSGG 9 cut(s) 198, 293, 633, 865, 936, 1124, 1171, 1172, 1600
AsuHPI GGTGA 7 cut(s) 186, 763, 950, 1000, 1282, 1382, 1408
AvaI CYCGRG 3 cut(s) 540, 1170, 1407
AvaII GGWCC 3 cut(s) 307, 496, 1051
AvrII CCTAGG 1 cut(s) 721
BaeGI GKGCMC 1 cut(s) 1192
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 8 cut(s) 159, 476, 877, 960, 966, 1021, 1602, 1679
BanII GRGCYC 2 cut(s) 578, 1533
BarI GAAGNNNNNNTAC 4 cut(s) 744, 776, 1448, 1480
BauI CACGAG 1 cut(s) 1496
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 3 cut(s) 702, 1052, 1625
Bbv12I GWGCWC 2 cut(s) 578, 1533
BbvI GCAGC 5 cut(s) 99, 138, 478, 838, 1537
BccI CCATC 8 cut(s) 65, 73, 235, 618, 664, 676, 1327, 1679
BceAI ACGGC 3 cut(s) 536, 1146, 1487
BciT130I CCWGG 6 cut(s) 134, 689, 1003, 1055, 1469, 1607
BcnI CCSGG 9 cut(s) 198, 293, 633, 865, 936, 1124, 1171, 1172, 1600
BcoDI GTCTC 4 cut(s) 749, 1088, 1169, 1381
BfaI CTAG 6 cut(s) 357, 428, 614, 620, 722, 1047
BfmI CTRYAG 2 cut(s) 164, 1428
BfoI RGCGCY 2 cut(s) 113, 1407
BfuAI ACCTGC 1 cut(s) 1258
BglI GCCNNNNNGGC 1 cut(s) 1334
BlnI CCTAGG 1 cut(s) 721
BlpI GCTNAGC 1 cut(s) 1344
Bme18I GGWCC 3 cut(s) 307, 496, 1051
BmeRI GACNNNNNGTC 1 cut(s) 724
BmeT110I CYCGRG 3 cut(s) 540, 1170, 1407
BmgT120I GGNCC 6 cut(s) 307, 496, 685, 883, 1051, 1131
BmrI ACTGGG 1 cut(s) 921
BmsI GCATC 3 cut(s) 171, 649, 1173
BmuI ACTGGG 1 cut(s) 921
BoxI GACNNNNGTC 2 cut(s) 818, 1056
BpiI GAAGAC 3 cut(s) 702, 1052, 1625
BplI GAGNNNNNCTC 6 cut(s) 523, 555, 560, 592, 1301, 1333
BpmI CTGGAG 4 cut(s) 785, 1322, 1490, 1658
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 1344
BpuEI CTTGAG 4 cut(s) 301, 1385, 1509, 1539
BpuMI CCSGG 9 cut(s) 198, 293, 633, 865, 936, 1124, 1171, 1172, 1600
Bsa29I ATCGAT 1 cut(s) 711
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 1233
BsaHI GRCGYC 3 cut(s) 699, 843, 1215
BsaI GGTCTC 1 cut(s) 749
BsaWI WCCGGW 2 cut(s) 40, 473
BsaXI ACNNNNNCTCC 4 cut(s) 977, 1007, 1502, 1532
Bse118I RCCGGY 3 cut(s) 473, 880, 963
Bse1I ACTGG 3 cut(s) 499, 768, 916
Bse3DI GCAATG 1 cut(s) 1533
Bse8I GATNNNNATC 1 cut(s) 1233
BseBI CCWGG 6 cut(s) 134, 689, 1003, 1055, 1469, 1607
BseCI ATCGAT 1 cut(s) 711
BseGI GGATG 6 cut(s) 186, 588, 629, 661, 1011, 1615
BseJI GATNNNNATC 1 cut(s) 1233
BseMI GCAATG 1 cut(s) 1533
BseMII CTCAG 5 cut(s) 79, 677, 1275, 1371, 1407
BseNI ACTGG 3 cut(s) 499, 768, 916
BseRI GAGGAG 3 cut(s) 586, 1259, 1523
BseSI GKGCMC 1 cut(s) 1192
BseX3I CGGCCG 1 cut(s) 1596
BseXI GCAGC 5 cut(s) 99, 138, 478, 838, 1537
BseYI CCCAGC 1 cut(s) 431
BsgI GTGCAG 2 cut(s) 98, 845
Bsh1236I CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
Bsh1285I CGRYCG 2 cut(s) 1123, 1599
BshNI GGYRCC 8 cut(s) 159, 476, 877, 960, 966, 1021, 1602, 1679
BshTI ACCGGT 1 cut(s) 473
BshVI ATCGAT 1 cut(s) 711
BsiEI CGRYCG 2 cut(s) 1123, 1599
BsiHKAI GWGCWC 2 cut(s) 578, 1533
BsiHKCI CYCGRG 3 cut(s) 540, 1170, 1407
BslFI GGGAC 5 cut(s) 266, 509, 1064, 1328, 1424
BsmAI GTCTC 4 cut(s) 749, 1088, 1169, 1381
BsmBI CGTCTC 1 cut(s) 1169
BsmFI GGGAC 5 cut(s) 266, 509, 1064, 1328, 1424
BsmI GAATGC 2 cut(s) 220, 595
Bso31I GGTCTC 1 cut(s) 749
BsoBI CYCGRG 3 cut(s) 540, 1170, 1407
Bsp1286I GDGCHC 3 cut(s) 578, 1192, 1533
Bsp143I GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
Bsp1720I GCTNAGC 1 cut(s) 1344
BspCNI CTCAG 5 cut(s) 78, 676, 1274, 1372, 1408
BspDI ATCGAT 1 cut(s) 711
BspFNI CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 4 cut(s) 791, 875, 945, 1482
BspT107I GGYRCC 8 cut(s) 159, 476, 877, 960, 966, 1021, 1602, 1679
BspTNI GGTCTC 1 cut(s) 749
BsrBI CCGCTC 1 cut(s) 1312
BsrDI GCAATG 1 cut(s) 1533
BsrFI RCCGGY 3 cut(s) 473, 880, 963
BsrI ACTGG 3 cut(s) 499, 768, 916
BssAI RCCGGY 3 cut(s) 473, 880, 963
BssMI GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
BssNAI GTATAC 1 cut(s) 996
BssNI GRCGYC 3 cut(s) 699, 843, 1215
BssSI CACGAG 1 cut(s) 1496
BssT1I CCWWGG 2 cut(s) 721, 1134
Bst1107I GTATAC 1 cut(s) 996
Bst2BI CACGAG 1 cut(s) 1496
Bst2UI CCWGG 6 cut(s) 134, 689, 1003, 1055, 1469, 1607
Bst4CI ACNGT 3 cut(s) 159, 168, 343
Bst6I CTCTTC 6 cut(s) 524, 636, 747, 941, 1199, 1386
BstACI GRCGYC 3 cut(s) 699, 843, 1215
BstBAI YACGTR 1 cut(s) 118
BstC8I GCNNGC 4 cut(s) 1131, 1188, 1219, 1691
BstDEI CTNAG 7 cut(s) 56, 65, 663, 1261, 1344, 1380, 1416
BstDSI CCRYGG 5 cut(s) 98, 155, 1338, 1485, 1503
BstF5I GGATG 6 cut(s) 186, 588, 629, 661, 1011, 1615
BstFNI CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
BstH2I RGCGCY 2 cut(s) 113, 1407
BstHHI GCGC 3 cut(s) 112, 1387, 1406
BstKTI GATC 8 cut(s) 12, 771, 799, 870, 953, 1044, 1477, 1657
BstMAI GTCTC 4 cut(s) 749, 1088, 1169, 1381
BstMBI GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
BstMCI CGRYCG 2 cut(s) 1123, 1599
BstMWI GCNNNNNNNGC 4 cut(s) 92, 625, 1214, 1334
BstNI CCWGG 6 cut(s) 134, 689, 1003, 1055, 1469, 1607
BstNSI RCATGY 1 cut(s) 388
BstPAI GACNNNNGTC 2 cut(s) 818, 1056
BstSFI CTRYAG 2 cut(s) 164, 1428
BstSLI GKGCMC 1 cut(s) 1192
BstUI CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
BstV1I GCAGC 5 cut(s) 99, 138, 478, 838, 1537
BstV2I GAAGAC 3 cut(s) 702, 1052, 1625
BstX2I RGATCY 1 cut(s) 950
BstYI RGATCY 1 cut(s) 950
BstZ17I GTATAC 1 cut(s) 996
BstZI CGGCCG 1 cut(s) 1596
Bsu15I ATCGAT 1 cut(s) 711
BsuTUI ATCGAT 1 cut(s) 711
BtgI CCRYGG 5 cut(s) 98, 155, 1338, 1485, 1503
BtgZI GCGATG 1 cut(s) 933
BtsCI GGATG 6 cut(s) 186, 588, 629, 661, 1011, 1615
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 4 cut(s) 1131, 1188, 1219, 1691
CaiI CAGNNNCTG 2 cut(s) 172, 1436
CfoI GCGC 3 cut(s) 112, 1387, 1406
Cfr10I RCCGGY 3 cut(s) 473, 880, 963
Cfr13I GGNCC 6 cut(s) 307, 496, 685, 883, 1051, 1131
Cfr42I CCGCGG 1 cut(s) 1341
Cfr9I CCCGGG 1 cut(s) 1170
ClaI ATCGAT 1 cut(s) 711
CseI GACGC 4 cut(s) 53, 707, 812, 1223
Csp6I GTAC 9 cut(s) 299, 313, 339, 477, 735, 878, 1204, 1513, 1603
CspAI ACCGGT 1 cut(s) 473
CspCI CAANNNNNGTGG 2 cut(s) 251, 286
CviAII CATG 6 cut(s) 19, 330, 385, 1180, 1283, 1446
CviQI GTAC 9 cut(s) 299, 313, 339, 477, 735, 878, 1204, 1513, 1603
DdeI CTNAG 7 cut(s) 56, 65, 663, 1261, 1344, 1380, 1416
DpnI GATC 8 cut(s) 11, 770, 798, 869, 952, 1043, 1476, 1656
DpnII GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
DriI GACNNNNNGTC 1 cut(s) 724
EaeI YGGCCR 5 cut(s) 81, 243, 837, 1335, 1596
EagI CGGCCG 1 cut(s) 1596
Eam1104I CTCTTC 6 cut(s) 524, 636, 747, 941, 1199, 1386
Eam1105I GACNNNNNGTC 1 cut(s) 724
EarI CTCTTC 6 cut(s) 524, 636, 747, 941, 1199, 1386
Ecl136II GAGCTC 2 cut(s) 576, 1531
EclXI CGGCCG 1 cut(s) 1596
Eco130I CCWWGG 2 cut(s) 721, 1134
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 2 cut(s) 578, 1533
Eco31I GGTCTC 1 cut(s) 749
Eco47I GGWCC 3 cut(s) 307, 496, 1051
Eco47III AGCGCT 1 cut(s) 1405
Eco52I CGGCCG 1 cut(s) 1596
Eco53kI GAGCTC 2 cut(s) 576, 1531
Eco57I CTGAAG 3 cut(s) 47, 1124, 1259
Eco72I CACGTG 1 cut(s) 118
Eco88I CYCGRG 3 cut(s) 540, 1170, 1407
EcoICRI GAGCTC 2 cut(s) 576, 1531
EcoO109I RGGNCCY 2 cut(s) 307, 1051
EcoRI GAATTC 1 cut(s) 287
EcoRII CCWGG 6 cut(s) 132, 687, 1001, 1053, 1467, 1605
EcoT14I CCWWGG 2 cut(s) 721, 1134
EcoT38I GRGCYC 2 cut(s) 578, 1533
ErhI CCWWGG 2 cut(s) 721, 1134
Esp3I CGTCTC 1 cut(s) 1169
FaeI CATG 6 cut(s) 22, 333, 388, 1183, 1286, 1449
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FaqI GGGAC 5 cut(s) 266, 509, 1064, 1328, 1424
FatI CATG 6 cut(s) 18, 329, 384, 1179, 1282, 1445
FauI CCCGC 6 cut(s) 328, 1122, 1179, 1305, 1380, 1620
FblI GTMKAC 2 cut(s) 717, 995
FokI GGATG 6 cut(s) 193, 575, 636, 668, 1018, 1622
FriOI GRGCYC 2 cut(s) 578, 1533
FspBI CTAG 6 cut(s) 357, 428, 614, 620, 722, 1047
GlaI GCGC 3 cut(s) 111, 1386, 1405
GsaI CCCAGC 1 cut(s) 435
GsuI CTGGAG 4 cut(s) 785, 1322, 1490, 1658
HaeII RGCGCY 2 cut(s) 113, 1407
HgaI GACGC 4 cut(s) 53, 707, 812, 1223
HhaI GCGC 3 cut(s) 112, 1387, 1406
Hin1I GRCGYC 3 cut(s) 699, 843, 1215
Hin1II CATG 6 cut(s) 22, 333, 388, 1183, 1286, 1449
Hin6I GCGC 3 cut(s) 110, 1385, 1404
HinP1I GCGC 3 cut(s) 110, 1385, 1404
HincII GTYRAC 2 cut(s) 207, 718
HindII GTYRAC 2 cut(s) 207, 718
HphI GGTGA 7 cut(s) 186, 763, 950, 1000, 1282, 1382, 1408
Hpy166II GTNNAC 5 cut(s) 207, 301, 718, 996, 1204
Hpy188I TCNGA 7 cut(s) 68, 517, 562, 872, 1239, 1381, 1417
Hpy188III TCNNGA 8 cut(s) 800, 850, 1102, 1409, 1526, 1556, 1637, 1658
Hpy8I GTNNAC 5 cut(s) 207, 301, 718, 996, 1204
Hpy99I CGWCG 1 cut(s) 845
HpyCH4III ACNGT 3 cut(s) 159, 168, 343
HpyCH4IV ACGT 2 cut(s) 117, 843
HpyCH4V TGCA 3 cut(s) 115, 826, 1282
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 625, 1214, 1334
HpyF3I CTNAG 7 cut(s) 56, 65, 663, 1261, 1344, 1380, 1416
HpySE526I ACGT 2 cut(s) 117, 843
Hsp92I GRCGYC 3 cut(s) 699, 843, 1215
Hsp92II CATG 6 cut(s) 22, 333, 388, 1183, 1286, 1449
HspAI GCGC 3 cut(s) 110, 1385, 1404
KpnI GGTACC 3 cut(s) 480, 881, 1606
KspI CCGCGG 1 cut(s) 1341
Kzo9I GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
LmnI GCTCC 7 cut(s) 52, 573, 633, 811, 915, 1309, 1360
Lsp1109I GCAGC 5 cut(s) 99, 138, 478, 838, 1537
LweI GCATC 3 cut(s) 171, 649, 1173
MaeI CTAG 6 cut(s) 357, 428, 614, 620, 722, 1047
MaeII ACGT 2 cut(s) 117, 843
MaeIII GTNAC 4 cut(s) 192, 343, 376, 811
MalI GATC 8 cut(s) 11, 770, 798, 869, 952, 1043, 1476, 1656
MbiI CCGCTC 1 cut(s) 1312
MboI GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
MflI RGATCY 1 cut(s) 950
MhlI GDGCHC 3 cut(s) 578, 1192, 1533
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 3 cut(s) 287, 447, 1619
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 3 cut(s) 1310, 1406, 1442
Mox20I TGGCCA 1 cut(s) 245
MroXI GAANNNNTTC 1 cut(s) 125
MscI TGGCCA 1 cut(s) 245
MseI TTAA 1 cut(s) 450
MslI CAYNNNNRTG 4 cut(s) 17, 711, 972, 1538
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 3 cut(s) 151, 469, 1340
Mva1269I GAATGC 2 cut(s) 220, 595
MvaI CCWGG 6 cut(s) 134, 689, 1003, 1055, 1469, 1607
MvnI CGCG 5 cut(s) 47, 86, 1208, 1340, 1387
MwoI GCNNNNNNNGC 4 cut(s) 92, 625, 1214, 1334
NciI CCSGG 9 cut(s) 198, 293, 633, 865, 936, 1124, 1171, 1172, 1600
NdeII GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
NlaIII CATG 6 cut(s) 22, 333, 388, 1183, 1286, 1449
NmeAIII GCCGAG 1 cut(s) 1354
NmuCI GTSAC 2 cut(s) 192, 811
NspI RCATGY 1 cut(s) 388
OliI CACNNNNGTG 1 cut(s) 972
PaqCI CACCTGC 1 cut(s) 1258
PceI AGGCCT 1 cut(s) 61
PctI GAATGC 2 cut(s) 220, 595
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 7 cut(s) 88, 121, 585, 1016, 1156, 1175, 1353
PflMI CCANNNNNTGG 1 cut(s) 1446
PinAI ACCGGT 1 cut(s) 473
PleI GAGTC 3 cut(s) 1310, 1406, 1441
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 3 cut(s) 1310, 1406, 1441
Ppu21I YACGTR 1 cut(s) 118
PpuMI RGGWCCY 2 cut(s) 307, 1051
PshAI GACNNNNGTC 2 cut(s) 818, 1056
Psp124BI GAGCTC 2 cut(s) 578, 1533
Psp5II RGGWCCY 2 cut(s) 307, 1051
Psp6I CCWGG 6 cut(s) 132, 687, 1001, 1053, 1467, 1605
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 431
PspGI CCWGG 6 cut(s) 132, 687, 1001, 1053, 1467, 1605
PspPI GGNCC 6 cut(s) 307, 496, 685, 883, 1051, 1131
PspPPI RGGWCCY 2 cut(s) 307, 1051
PstNI CAGNNNCTG 2 cut(s) 172, 1436
PsuI RGATCY 1 cut(s) 950
PvuII CAGCTG 1 cut(s) 469
RsaI GTAC 9 cut(s) 300, 314, 340, 478, 736, 879, 1205, 1514, 1604
RsaNI GTAC 9 cut(s) 299, 313, 339, 477, 735, 878, 1204, 1513, 1603
RseI CAYNNNNRTG 4 cut(s) 17, 711, 972, 1538
SacI GAGCTC 2 cut(s) 578, 1533
SacII CCGCGG 1 cut(s) 1341
SalI GTCGAC 1 cut(s) 716
SaqAI TTAA 1 cut(s) 450
Sau3AI GATC 8 cut(s) 9, 768, 796, 867, 950, 1041, 1474, 1654
Sau96I GGNCC 6 cut(s) 307, 496, 685, 883, 1051, 1131
SchI GAGTC 3 cut(s) 1310, 1406, 1442
SduI GDGCHC 3 cut(s) 578, 1192, 1533
SfaNI GCATC 3 cut(s) 171, 649, 1173
SfcI CTRYAG 2 cut(s) 164, 1428
SfiI GGCCNNNNNGGCC 1 cut(s) 1334
Sfr303I CCGCGG 1 cut(s) 1341
SgrBI CCGCGG 1 cut(s) 1341
SinI GGWCC 3 cut(s) 307, 496, 1051
SmaI CCCGGG 1 cut(s) 1172
SmiMI CAYNNNNRTG 4 cut(s) 17, 711, 972, 1538
SmlI CTYRAG 4 cut(s) 316, 1364, 1524, 1554
SmoI CTYRAG 4 cut(s) 316, 1364, 1524, 1554
Sse9I AATT 3 cut(s) 287, 447, 1619
SseBI AGGCCT 1 cut(s) 61
SspMI CTAG 6 cut(s) 357, 428, 614, 620, 722, 1047
SstI GAGCTC 2 cut(s) 578, 1533
StuI AGGCCT 1 cut(s) 61
StyI CCWWGG 2 cut(s) 721, 1134
TaaI ACNGT 3 cut(s) 159, 168, 343
TaiI ACGT 2 cut(s) 120, 846
TaqI TCGA 5 cut(s) 395, 711, 717, 728, 1119
TasI AATT 3 cut(s) 287, 447, 1619
TatI WGTACW 2 cut(s) 312, 1512
TauI GCSGC 6 cut(s) 86, 356, 1340, 1343, 1598, 1667
TfiI GAWTC 7 cut(s) 88, 121, 585, 1016, 1156, 1175, 1353
Tru1I TTAA 1 cut(s) 450
Tru9I TTAA 1 cut(s) 450
TseFI GTSAC 2 cut(s) 192, 811
TseI GCWGC 5 cut(s) 112, 151, 466, 826, 1550
Tsp45I GTSAC 2 cut(s) 192, 811
TspDTI ATGAA 6 cut(s) 17, 300, 577, 1434, 1589, 1626
TspGWI ACGGA 1 cut(s) 736
TspMI CCCGGG 1 cut(s) 1170
Van91I CCANNNNNTGG 1 cut(s) 1446
VpaK11BI GGWCC 3 cut(s) 307, 496, 1051
XapI RAATTY 2 cut(s) 287, 1619
XceI RCATGY 1 cut(s) 388
XmaI CCCGGG 1 cut(s) 1170
XmaJI CCTAGG 1 cut(s) 721
XmiI GTMKAC 2 cut(s) 717, 995
XmnI GAANNNNTTC 1 cut(s) 125
XspI CTAG 6 cut(s) 357, 428, 614, 620, 722, 1047
ZraI GACGTC 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.