Rmu_sc0005507.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005507.1
OG0000087
Physical Location & Seq
Forward (+)
9308 .. 11522
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005507.1_g000003.1.cds

Sequence Viewer

Length: 1881 bp
atggttgtaccagtcttctgcccgggaagccgaggtggatatcgaccagtacttaggccgggtagatcaattagcaagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatcagttggggccccggtagtcacagtggccattcccgagggcattccgaagccgaggtacacactagcggatgggacagtatgcgacgaacccgggagaagtatgacgatgaaggagatcatcgacctgcgattgaagtgggggataccggacgcggtggagcttaggcctcttagggatggggaactggccgcgaatcctgccccgcggtgggtggtgctgcacgagaatcagctccaccaagggttatcgctaccgctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaacggggcagctgaccccgaatgccgttcgccaaatatatagtatgatggcgatgtgggacttgtgtcaacaagggtggccttccgtaaacgaatttcgcgcgtcctacactctatcagaagtagaaaggaagaggatagcccgggtatatgccgtttggtcagagaaagagaggagctcttatagattcatccggcactctatactttataggctagggctagggtggctctccgtgaaagcgccgaagaggaaaccccggaaaggcaaagaggaggacagaatggatgatgcccaactgatggacatgctgatgggtcagggagaagacgccctgcacatcgacgtcgacctagggtcgaaaggtacgagtcggtccattgaagaaacccttatggagatcaccgatgagggatacggtgagcttgaccccgacgctcccgtgacccacgtcgcgcagccctccctggccgatgttatcacgatagatgacaccgggatgggaaaagtaccggccccagtgcctatttcctctcgttctactgggagcgacgaggtattactcccaggtgagaagaagagatcccataggcaccggcatcggactgataaagaggtgacgtatactgcccgggatgtccaagggactggtgcgaagaggcagaagaaagatcacccgggactagagtcgtcgccttctcttggcctgttgtctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacgaggttgccgatgaaaagttcgtacggtccatgctgggggacctgaaggatattgacctcgaccgggttcgggccaaggatagcactccccaggagaatcgccgtctcgcccgggagtcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagattctcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggtcaagctggagaaggagcgggactcactgagggctgaaatggccgccgctaagcagcggattgcggagcttgagggtgaggcgactgaggcgcgggaagaagtaaaaaacgcccgggactccgagaaaaaggctgtagaatctgcggtctcatggaaggagaaggcagaccacctggagggtagccttcccgcggagaggcacgaggccgtggaggagtacaagtcctctaaagagctcatctccatgctggctgctgcccaagataaggttgtcatcatgaagttcaaggagtgggtggcggccgggtatttggatgaagccaaattcaggcggggtcttctggagaaaaagaaaagagatcgggaggcggcggccaagtctggtgctggtgggtcccagagtaccggtggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

626

Amino Acids

69.6

Weight (kDa)

6.43

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1420
AatII GACGTC 1 cut(s) 801
Acc36I ACCTGC 2 cut(s) 285, 1420
AccB1I GGYRCC 2 cut(s) 417, 1044
AccB7I CCANNNNNTGG 1 cut(s) 754
AccBSI CCGCTC 1 cut(s) 1474
AccI GTMKAC 2 cut(s) 801, 1076
AccII CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
AclWI GGATC 2 cut(s) 157, 1029
AcoI YGGCCR 6 cut(s) 177, 339, 921, 1497, 1758, 1830
AcsI RAATTY 2 cut(s) 545, 1781
AcuI CTGAAG 2 cut(s) 1286, 1421
AcyI GRCGYC 3 cut(s) 783, 798, 1377
AgeI ACCGGT 1 cut(s) 1862
AgsI TTSAA 4 cut(s) 286, 836, 1360, 1744
AhdI GACNNNNNGTC 1 cut(s) 808
AjiI CACGTC 1 cut(s) 904
AjnI CCWGG 4 cut(s) 918, 1018, 1311, 1629
AloI GAACNNNNNNTCC 2 cut(s) 71, 103
AluBI AGCT 9 cut(s) 313, 385, 463, 630, 877, 1207, 1462, 1525, 1693
AluI AGCT 9 cut(s) 313, 385, 463, 630, 877, 1207, 1462, 1525, 1693
Alw21I GWGCWC 2 cut(s) 632, 1695
Alw26I GTCTC 3 cut(s) 1170, 1331, 1609
AlwI GGATC 2 cut(s) 157, 1029
AlwNI CAGNNNCTG 2 cut(s) 430, 1210
Ama87I CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
ApaI GGGCCC 1 cut(s) 163
ApoI RAATTY 2 cut(s) 545, 1781
AsiGI ACCGGT 1 cut(s) 1862
AspA2I CCTAGG 1 cut(s) 805
AspLEI GCGC 4 cut(s) 554, 697, 910, 1549
AspS9I GGNCC 9 cut(s) 87, 159, 160, 828, 967, 1248, 1261, 1293, 1851
AsuHPI GGTGA 8 cut(s) 146, 847, 884, 1034, 1081, 1118, 1444, 1544
AvaI CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
AvaII GGWCC 5 cut(s) 87, 828, 1248, 1261, 1851
AvrII CCTAGG 1 cut(s) 805
BaeGI GKGCMC 2 cut(s) 163, 1354
BalI TGGCCA 1 cut(s) 179
BanI GGYRCC 2 cut(s) 417, 1044
BanII GRGCYC 3 cut(s) 163, 632, 1695
BarI GAAGNNNNNNTAC 2 cut(s) 191, 223
BauI CACGAG 2 cut(s) 374, 1658
BbsI GAAGAC 3 cut(s) 7, 786, 1787
Bbv12I GWGCWC 2 cut(s) 632, 1695
BccI CCATC 7 cut(s) 215, 323, 493, 748, 760, 946, 1205
BceAI ACGGC 4 cut(s) 461, 590, 1308, 1649
BcgI CGANNNNNNTGC 2 cut(s) 1034, 1068
BciT130I CCWGG 4 cut(s) 920, 1020, 1313, 1631
BciVI GTATCC 2 cut(s) 288, 860
BcoDI GTCTC 3 cut(s) 1170, 1331, 1609
BfaI CTAG 5 cut(s) 215, 668, 674, 806, 1136
BfmI CTRYAG 2 cut(s) 422, 1590
BfoI RGCGCY 1 cut(s) 698
BfuAI ACCTGC 2 cut(s) 285, 1420
BfuI GTATCC 2 cut(s) 288, 860
BlnI CCTAGG 1 cut(s) 805
BlpI GCTNAGC 1 cut(s) 1506
BmcAI AGTACT 1 cut(s) 51
Bme18I GGWCC 5 cut(s) 87, 828, 1248, 1261, 1851
BmeRI GACNNNNNGTC 1 cut(s) 808
BmeT110I CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
BmgBI CACGTC 1 cut(s) 904
BmgT120I GGNCC 9 cut(s) 87, 159, 160, 828, 967, 1248, 1261, 1293, 1851
BmrI ACTGGG 3 cut(s) 105, 965, 1005
BmsI GCATC 4 cut(s) 429, 733, 1060, 1335
BmuI ACTGGG 3 cut(s) 105, 965, 1005
BoxI GACNNNNGTC 3 cut(s) 516, 902, 1138
BpiI GAAGAC 3 cut(s) 7, 786, 1787
BplI GAGNNNNNCTC 6 cut(s) 614, 646, 1463, 1495, 1682, 1714
BpmI CTGGAG 3 cut(s) 1484, 1652, 1820
Bpu10I CCTNAGC 1 cut(s) 314
Bpu1102I GCTNAGC 1 cut(s) 1506
BpuEI CTTGAG 1 cut(s) 1547
BsaBI GATNNNNATC 1 cut(s) 1395
BsaHI GRCGYC 3 cut(s) 783, 798, 1377
BsaI GGTCTC 1 cut(s) 1609
BsaWI WCCGGW 3 cut(s) 298, 1177, 1862
BsaXI ACNNNNNCTCC 2 cut(s) 1664, 1694
Bse118I RCCGGY 3 cut(s) 964, 1047, 1862
Bse1I ACTGG 7 cut(s) 11, 47, 100, 342, 971, 1000, 1105
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 4 cut(s) 920, 1020, 1313, 1631
BseGI GGATG 8 cut(s) 226, 334, 444, 642, 745, 957, 1093, 1777
BseJI GATNNNNATC 1 cut(s) 1395
BseMII CTCAG 3 cut(s) 1202, 1475, 1533
BseNI ACTGG 7 cut(s) 11, 47, 100, 342, 971, 1000, 1105
BseRI GAGGAG 5 cut(s) 134, 640, 740, 1421, 1685
BseSI GKGCMC 2 cut(s) 163, 1354
BseX3I CGGCCG 1 cut(s) 1758
BseYI CCCAGC 1 cut(s) 1255
BsgI GTGCAG 2 cut(s) 356, 773
Bsh1236I CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
Bsh1285I CGRYCG 3 cut(s) 1285, 1761, 1873
BshNI GGYRCC 2 cut(s) 417, 1044
BshTI ACCGGT 1 cut(s) 1862
BsiEI CGRYCG 3 cut(s) 1285, 1761, 1873
BsiHKAI GWGCWC 2 cut(s) 632, 1695
BsiHKCI CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
BsiWI CGTACG 1 cut(s) 1243
BslFI GGGAC 8 cut(s) 238, 524, 1111, 1146, 1274, 1490, 1586, 1837
BsmAI GTCTC 3 cut(s) 1170, 1331, 1609
BsmBI CGTCTC 1 cut(s) 1331
BsmFI GGGAC 8 cut(s) 238, 524, 1111, 1146, 1274, 1490, 1586, 1837
BsmI GAATGC 2 cut(s) 192, 478
Bso31I GGTCTC 1 cut(s) 1609
BsoBI CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
Bsp120I GGGCCC 1 cut(s) 159
Bsp1286I GDGCHC 4 cut(s) 163, 632, 1354, 1695
Bsp143I GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
Bsp1720I GCTNAGC 1 cut(s) 1506
BspCNI CTCAG 3 cut(s) 1203, 1476, 1534
BspFNI CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
BspHI TCATGA 1 cut(s) 1734
BspMI ACCTGC 2 cut(s) 285, 1420
BspPI GGATC 2 cut(s) 157, 1029
BspT107I GGYRCC 2 cut(s) 417, 1044
BspTNI GGTCTC 1 cut(s) 1609
BsrBI CCGCTC 1 cut(s) 1474
BsrFI RCCGGY 3 cut(s) 964, 1047, 1862
BsrI ACTGG 7 cut(s) 11, 47, 100, 342, 971, 1000, 1105
BssAI RCCGGY 3 cut(s) 964, 1047, 1862
BssMI GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
BssNAI GTATAC 1 cut(s) 1077
BssNI GRCGYC 3 cut(s) 783, 798, 1377
BssSI CACGAG 2 cut(s) 374, 1658
BssT1I CCWWGG 4 cut(s) 391, 805, 1093, 1296
Bst1107I GTATAC 1 cut(s) 1077
Bst2BI CACGAG 2 cut(s) 374, 1658
Bst2UI CCWGG 4 cut(s) 920, 1020, 1313, 1631
Bst4CI ACNGT 5 cut(s) 175, 229, 426, 872, 1248
Bst6I CTCTTC 5 cut(s) 578, 695, 1025, 1103, 1361
BstACI GRCGYC 3 cut(s) 783, 798, 1377
BstC8I GCNNGC 3 cut(s) 1350, 1381, 1707
BstDEI CTNAG 7 cut(s) 53, 314, 323, 1211, 1484, 1506, 1542
BstDSI CCRYGG 3 cut(s) 356, 1647, 1665
BstF5I GGATG 8 cut(s) 226, 334, 444, 642, 745, 957, 1093, 1777
BstFNI CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
BstH2I RGCGCY 1 cut(s) 698
BstHHI GCGC 4 cut(s) 554, 697, 910, 1549
BstKTI GATC 8 cut(s) 68, 152, 270, 855, 1037, 1126, 1819, 1873
BstMAI GTCTC 3 cut(s) 1170, 1331, 1609
BstMBI GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
BstMCI CGRYCG 3 cut(s) 1285, 1761, 1873
BstMWI GCNNNNNNNGC 9 cut(s) 27, 350, 409, 439, 679, 1201, 1376, 1496, 1544
BstNI CCWGG 4 cut(s) 920, 1020, 1313, 1631
BstNSI RCATGY 1 cut(s) 763
BstPAI GACNNNNGTC 3 cut(s) 516, 902, 1138
BstSFI CTRYAG 2 cut(s) 422, 1590
BstSLI GKGCMC 2 cut(s) 163, 1354
BstUI CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
BstV2I GAAGAC 3 cut(s) 7, 786, 1787
BstX2I RGATCY 1 cut(s) 1034
BstXI CCANNNNNNTGG 1 cut(s) 1100
BstYI RGATCY 1 cut(s) 1034
BstZ17I GTATAC 1 cut(s) 1077
BstZI CGGCCG 1 cut(s) 1758
BsuI GTATCC 2 cut(s) 288, 860
BtgI CCRYGG 3 cut(s) 356, 1647, 1665
BtgZI GCGATG 1 cut(s) 518
BtrI CACGTC 1 cut(s) 904
BtsCI GGATG 8 cut(s) 226, 334, 444, 642, 745, 957, 1093, 1777
BtsIMutI CAGTG 3 cut(s) 180, 978, 1481
BveI ACCTGC 2 cut(s) 285, 1420
Cac8I GCNNGC 3 cut(s) 1350, 1381, 1707
CaiI CAGNNNCTG 2 cut(s) 430, 1210
CciI TCATGA 1 cut(s) 1734
CfoI GCGC 4 cut(s) 554, 697, 910, 1549
Cfr10I RCCGGY 3 cut(s) 964, 1047, 1862
Cfr13I GGNCC 9 cut(s) 87, 159, 160, 828, 967, 1248, 1261, 1293, 1851
Cfr42I CCGCGG 2 cut(s) 359, 1650
Cfr9I CCCGGG 7 cut(s) 22, 242, 594, 1083, 1129, 1332, 1569
CseI GACGC 5 cut(s) 311, 543, 791, 896, 1385
CspAI ACCGGT 1 cut(s) 1862
CspCI CAANNNNNGTGG 2 cut(s) 509, 544
CviAII CATG 6 cut(s) 760, 1252, 1445, 1608, 1702, 1735
DdeI CTNAG 7 cut(s) 53, 314, 323, 1211, 1484, 1506, 1542
DpnI GATC 8 cut(s) 67, 151, 269, 854, 1036, 1125, 1818, 1872
DpnII GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
DriI GACNNNNNGTC 1 cut(s) 808
EaeI YGGCCR 6 cut(s) 177, 339, 921, 1497, 1758, 1830
EagI CGGCCG 1 cut(s) 1758
Eam1104I CTCTTC 5 cut(s) 578, 695, 1025, 1103, 1361
Eam1105I GACNNNNNGTC 1 cut(s) 808
EarI CTCTTC 5 cut(s) 578, 695, 1025, 1103, 1361
Ecl136II GAGCTC 2 cut(s) 630, 1693
EclXI CGGCCG 1 cut(s) 1758
Eco130I CCWWGG 4 cut(s) 391, 805, 1093, 1296
Eco147I AGGCCT 1 cut(s) 319
Eco24I GRGCYC 3 cut(s) 163, 632, 1695
Eco31I GGTCTC 1 cut(s) 1609
Eco32I GATATC 1 cut(s) 41
Eco47I GGWCC 5 cut(s) 87, 828, 1248, 1261, 1851
Eco52I CGGCCG 1 cut(s) 1758
Eco53kI GAGCTC 2 cut(s) 630, 1693
Eco57I CTGAAG 2 cut(s) 1286, 1421
Eco88I CYCGRG 8 cut(s) 22, 185, 242, 594, 1083, 1129, 1332, 1569
EcoICRI GAGCTC 2 cut(s) 630, 1693
EcoO109I RGGNCCY 5 cut(s) 87, 159, 160, 1261, 1851
EcoRII CCWGG 4 cut(s) 918, 1018, 1311, 1629
EcoRV GATATC 1 cut(s) 41
EcoT14I CCWWGG 4 cut(s) 391, 805, 1093, 1296
EcoT38I GRGCYC 3 cut(s) 163, 632, 1695
ErhI CCWWGG 4 cut(s) 391, 805, 1093, 1296
Esp3I CGTCTC 1 cut(s) 1331
FaeI CATG 6 cut(s) 763, 1255, 1448, 1611, 1705, 1738
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FaqI GGGAC 8 cut(s) 238, 524, 1111, 1146, 1274, 1490, 1586, 1837
FatI CATG 6 cut(s) 759, 1251, 1444, 1607, 1701, 1734
FauI CCCGC 7 cut(s) 363, 1177, 1341, 1467, 1542, 1654, 1782
FblI GTMKAC 2 cut(s) 801, 1076
FokI GGATG 8 cut(s) 233, 341, 451, 629, 752, 964, 1100, 1784
FriOI GRGCYC 3 cut(s) 163, 632, 1695
FspBI CTAG 5 cut(s) 215, 668, 674, 806, 1136
GlaI GCGC 4 cut(s) 553, 696, 909, 1548
GsaI CCCAGC 1 cut(s) 1259
GsuI CTGGAG 3 cut(s) 1484, 1652, 1820
HaeII RGCGCY 1 cut(s) 698
HgaI GACGC 5 cut(s) 311, 543, 791, 896, 1385
HhaI GCGC 4 cut(s) 554, 697, 910, 1549
Hin1I GRCGYC 3 cut(s) 783, 798, 1377
Hin1II CATG 6 cut(s) 763, 1255, 1448, 1611, 1705, 1738
Hin6I GCGC 4 cut(s) 552, 695, 908, 1547
HinP1I GCGC 4 cut(s) 552, 695, 908, 1547
HincII GTYRAC 3 cut(s) 453, 521, 802
HindII GTYRAC 3 cut(s) 453, 521, 802
HphI GGTGA 8 cut(s) 146, 847, 884, 1034, 1081, 1118, 1444, 1544
Hpy166II GTNNAC 7 cut(s) 210, 453, 521, 541, 802, 1077, 1366
Hpy188I TCNGA 8 cut(s) 109, 127, 198, 571, 616, 1056, 1401, 1579
Hpy188III TCNNGA 5 cut(s) 185, 934, 1735, 1799, 1820
Hpy8I GTNNAC 7 cut(s) 210, 453, 521, 541, 802, 1077, 1366
Hpy99I CGWCG 8 cut(s) 131, 239, 800, 803, 890, 908, 1007, 1147
HpyCH4III ACNGT 5 cut(s) 175, 229, 426, 872, 1248
HpyCH4IV ACGT 3 cut(s) 798, 903, 1073
HpyCH4V TGCA 2 cut(s) 373, 790
HpyF10VI GCNNNNNNNGC 9 cut(s) 27, 350, 409, 439, 679, 1201, 1376, 1496, 1544
HpyF3I CTNAG 7 cut(s) 53, 314, 323, 1211, 1484, 1506, 1542
HpySE526I ACGT 3 cut(s) 798, 903, 1073
Hsp92I GRCGYC 3 cut(s) 783, 798, 1377
Hsp92II CATG 6 cut(s) 763, 1255, 1448, 1611, 1705, 1738
HspAI GCGC 4 cut(s) 552, 695, 908, 1547
KflI GGGWCCC 1 cut(s) 1851
KspI CCGCGG 2 cut(s) 359, 1650
Kzo9I GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
LmnI GCTCC 7 cut(s) 310, 390, 627, 895, 999, 1471, 1522
LweI GCATC 4 cut(s) 429, 733, 1060, 1335
MaeI CTAG 5 cut(s) 215, 668, 674, 806, 1136
MaeII ACGT 3 cut(s) 798, 903, 1073
MaeIII GTNAC 3 cut(s) 169, 895, 1069
MalI GATC 8 cut(s) 67, 151, 269, 854, 1036, 1125, 1818, 1872
MbiI CCGCTC 1 cut(s) 1474
MboI GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
MflI RGATCY 1 cut(s) 1034
MhlI GDGCHC 4 cut(s) 163, 632, 1354, 1695
MlsI TGGCCA 1 cut(s) 179
MluCI AATT 3 cut(s) 69, 545, 1781
MluNI TGGCCA 1 cut(s) 179
MlyI GAGTC 6 cut(s) 131, 832, 1148, 1346, 1472, 1568
MmeI TCCRAC 1 cut(s) 150
Mox20I TGGCCA 1 cut(s) 179
MscI TGGCCA 1 cut(s) 179
MslI CAYNNNNRTG 3 cut(s) 764, 950, 1700
Msp20I TGGCCA 1 cut(s) 179
MspA1I CMGCKG 6 cut(s) 358, 409, 463, 1207, 1513, 1649
Mva1269I GAATGC 2 cut(s) 192, 478
MvaI CCWGG 4 cut(s) 920, 1020, 1313, 1631
MvnI CGCG 8 cut(s) 305, 344, 358, 552, 554, 908, 1549, 1649
MwoI GCNNNNNNNGC 9 cut(s) 27, 350, 409, 439, 679, 1201, 1376, 1496, 1544
NdeII GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
NlaIII CATG 6 cut(s) 763, 1255, 1448, 1611, 1705, 1738
NmeAIII GCCGAG 2 cut(s) 56, 228
NmuCI GTSAC 3 cut(s) 169, 895, 1069
NspI RCATGY 1 cut(s) 763
PagI TCATGA 1 cut(s) 1734
PaqCI CACCTGC 1 cut(s) 1420
PceI AGGCCT 1 cut(s) 319
PcsI WCGNNNNNNNCGW 3 cut(s) 89, 818, 1227
PctI GAATGC 2 cut(s) 192, 478
PfeI GAWTC 6 cut(s) 346, 379, 639, 1318, 1391, 1595
Pfl23II CGTACG 1 cut(s) 1243
PflMI CCANNNNNTGG 1 cut(s) 754
PinAI ACCGGT 1 cut(s) 1862
Ple19I CGATCG 1 cut(s) 1873
PleI GAGTC 6 cut(s) 130, 831, 1147, 1345, 1472, 1568
PpsI GAGTC 6 cut(s) 130, 831, 1147, 1345, 1472, 1568
PpuMI RGGWCCY 3 cut(s) 87, 1261, 1851
PshAI GACNNNNGTC 3 cut(s) 516, 902, 1138
Psp124BI GAGCTC 2 cut(s) 632, 1695
Psp5II RGGWCCY 3 cut(s) 87, 1261, 1851
Psp6I CCWGG 4 cut(s) 918, 1018, 1311, 1629
PspFI CCCAGC 1 cut(s) 1255
PspGI CCWGG 4 cut(s) 918, 1018, 1311, 1629
PspLI CGTACG 1 cut(s) 1243
PspOMI GGGCCC 1 cut(s) 159
PspPI GGNCC 9 cut(s) 87, 159, 160, 828, 967, 1248, 1261, 1293, 1851
PspPPI RGGWCCY 3 cut(s) 87, 1261, 1851
PstNI CAGNNNCTG 2 cut(s) 430, 1210
PsuI RGATCY 1 cut(s) 1034
PvuI CGATCG 1 cut(s) 1873
PvuII CAGCTG 2 cut(s) 463, 1207
RseI CAYNNNNRTG 3 cut(s) 764, 950, 1700
SacI GAGCTC 2 cut(s) 632, 1695
SacII CCGCGG 2 cut(s) 359, 1650
SalI GTCGAC 1 cut(s) 800
Sau3AI GATC 8 cut(s) 65, 149, 267, 852, 1034, 1123, 1816, 1870
Sau96I GGNCC 9 cut(s) 87, 159, 160, 828, 967, 1248, 1261, 1293, 1851
ScaI AGTACT 1 cut(s) 51
SchI GAGTC 6 cut(s) 131, 832, 1148, 1346, 1472, 1568
SduI GDGCHC 4 cut(s) 163, 632, 1354, 1695
SfaNI GCATC 4 cut(s) 429, 733, 1060, 1335
SfcI CTRYAG 2 cut(s) 422, 1590
Sfr303I CCGCGG 2 cut(s) 359, 1650
SgrBI CCGCGG 2 cut(s) 359, 1650
SinI GGWCC 5 cut(s) 87, 828, 1248, 1261, 1851
SmaI CCCGGG 7 cut(s) 24, 244, 596, 1085, 1131, 1334, 1571
SmiMI CAYNNNNRTG 3 cut(s) 764, 950, 1700
SmlI CTYRAG 1 cut(s) 1526
SmoI CTYRAG 1 cut(s) 1526
Sse9I AATT 3 cut(s) 69, 545, 1781
SseBI AGGCCT 1 cut(s) 319
SspMI CTAG 5 cut(s) 215, 668, 674, 806, 1136
SstI GAGCTC 2 cut(s) 632, 1695
StuI AGGCCT 1 cut(s) 319
StyI CCWWGG 4 cut(s) 391, 805, 1093, 1296
TaaI ACNGT 5 cut(s) 175, 229, 426, 872, 1248
TaiI ACGT 3 cut(s) 801, 906, 1076
TaqI TCGA 7 cut(s) 43, 92, 273, 795, 801, 812, 1281
TaqII GACCGA 1 cut(s) 816
TasI AATT 3 cut(s) 69, 545, 1781
TatI WGTACW 2 cut(s) 49, 1674
TauI GCSGC 6 cut(s) 344, 1502, 1505, 1760, 1829, 1832
TfiI GAWTC 6 cut(s) 346, 379, 639, 1318, 1391, 1595
TscAI CASTG 3 cut(s) 180, 978, 1488
TseFI GTSAC 3 cut(s) 169, 895, 1069
Tsp45I GTSAC 3 cut(s) 169, 895, 1069
TspDTI ATGAA 6 cut(s) 275, 631, 1248, 1433, 1751, 1788
TspGWI ACGGA 2 cut(s) 526, 676
TspMI CCCGGG 7 cut(s) 22, 242, 594, 1083, 1129, 1332, 1569
TspRI CASTG 3 cut(s) 180, 978, 1488
Van91I CCANNNNNTGG 1 cut(s) 754
VpaK11BI GGWCC 5 cut(s) 87, 828, 1248, 1261, 1851
XapI RAATTY 2 cut(s) 545, 1781
XceI RCATGY 1 cut(s) 763
XcmI CCANNNNNNNNNTGG 1 cut(s) 1862
XmaI CCCGGG 7 cut(s) 22, 242, 594, 1083, 1129, 1332, 1569
XmaJI CCTAGG 1 cut(s) 805
XmiI GTMKAC 2 cut(s) 801, 1076
XspI CTAG 5 cut(s) 215, 668, 674, 806, 1136
ZraI GACGTC 1 cut(s) 799
ZrmI AGTACT 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.