Belongs to the DEAD box helicase family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2371 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 62 |
| Acc36I | ACCTGC | 1 cut(s) | 2371 |
| Acc65I | GGTACC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| AccB1I | GGYRCC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| AccBSI | CCGCTC | 3 cut(s) | 2425, 2605, 2770 |
| AccI | GTMKAC | 2 cut(s) | 909, 1119 |
| AccII | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| AccIII | TCCGGA | 1 cut(s) | 358 |
| AclWI | GGATC | 8 cut(s) | 612, 853, 1003, 1826, 1980, 2092, 2220, 2595 |
| AcoI | YGGCCR | 6 cut(s) | 1023, 1248, 1872, 2032, 2448, 2709 |
| AcsI | RAATTY | 3 cut(s) | 347, 671, 2732 |
| AcuI | CTGAAG | 4 cut(s) | 1064, 1151, 2237, 2372 |
| AcyI | GRCGYC | 2 cut(s) | 1839, 2328 |
| AgeI | ACCGGT | 4 cut(s) | 891, 1478, 2051, 2795 |
| AgsI | TTSAA | 3 cut(s) | 671, 1765, 2311 |
| AleI | CACNNNNGTG | 1 cut(s) | 1901 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 917, 949 |
| Alw21I | GWGCWC | 1 cut(s) | 1583 |
| Alw26I | GTCTC | 5 cut(s) | 1784, 2282, 2560, 2750, 2808 |
| AlwI | GGATC | 8 cut(s) | 612, 853, 1003, 1826, 1980, 2092, 2220, 2595 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2161, 2549 |
| Ama87I | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| Aor13HI | TCCGGA | 1 cut(s) | 358 |
| ApoI | RAATTY | 3 cut(s) | 347, 671, 2732 |
| AseI | ATTAAT | 1 cut(s) | 1703 |
| AsiGI | ACCGGT | 4 cut(s) | 891, 1478, 2051, 2795 |
| Asp718I | GGTACC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| AspA2I | CCTAGG | 1 cut(s) | 1756 |
| AspLEI | GCGC | 3 cut(s) | 34, 1216, 2500 |
| AsuHPI | GGTGA | 9 cut(s) | 190, 992, 1360, 1835, 1985, 2032, 2069, 2395, 2495 |
| AvaI | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| AvaII | GGWCC | 7 cut(s) | 236, 650, 793, 933, 1258, 1501, 2199 |
| AvrII | CCTAGG | 1 cut(s) | 1756 |
| BaeGI | GKGCMC | 1 cut(s) | 1929 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 792, 825 |
| BalI | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| BanI | GGYRCC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| BanII | GRGCYC | 2 cut(s) | 272, 1583 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1037, 1069, 1973, 2005 |
| BauI | CACGAG | 3 cut(s) | 1220, 1771, 2609 |
| BbsI | GAAGAC | 1 cut(s) | 852 |
| Bbv12I | GWGCWC | 1 cut(s) | 1583 |
| BbvCI | CCTCAGC | 1 cut(s) | 2493 |
| BceAI | ACGGC | 6 cut(s) | 640, 1541, 2108, 2259, 2537, 2600 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1985, 2019 |
| BciVI | GTATCC | 3 cut(s) | 832, 1811, 2162 |
| BcoDI | GTCTC | 5 cut(s) | 1784, 2282, 2560, 2750, 2808 |
| BfmI | CTRYAG | 2 cut(s) | 1739, 2541 |
| BfoI | RGCGCY | 1 cut(s) | 1217 |
| BfuAI | ACCTGC | 1 cut(s) | 2371 |
| BfuI | GTATCC | 3 cut(s) | 832, 1811, 2162 |
| BlnI | CCTAGG | 1 cut(s) | 1756 |
| BmcAI | AGTACT | 1 cut(s) | 250 |
| Bme18I | GGWCC | 7 cut(s) | 236, 650, 793, 933, 1258, 1501, 2199 |
| BmeT110I | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| BmrI | ACTGGG | 5 cut(s) | 342, 951, 1318, 1916, 1956 |
| BmsI | GCATC | 5 cut(s) | 79, 646, 1684, 1723, 2011 |
| BmuI | ACTGGG | 5 cut(s) | 342, 951, 1318, 1916, 1956 |
| BpiI | GAAGAC | 1 cut(s) | 852 |
| BpmI | CTGGAG | 3 cut(s) | 2435, 2603, 2732 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1160, 2493 |
| BpuEI | CTTGAG | 1 cut(s) | 2498 |
| BsaBI | GATNNNNATC | 4 cut(s) | 120, 1748, 2346, 2820 |
| BsaHI | GRCGYC | 2 cut(s) | 1839, 2328 |
| BsaI | GGTCTC | 3 cut(s) | 1784, 2750, 2808 |
| BsaWI | WCCGGW | 7 cut(s) | 358, 842, 891, 1478, 2051, 2128, 2795 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 209, 239, 2009, 2039, 2615, 2645 |
| Bse118I | RCCGGY | 6 cut(s) | 891, 1478, 1915, 1998, 2051, 2795 |
| Bse3DI | GCAATG | 1 cut(s) | 1087 |
| Bse8I | GATNNNNATC | 4 cut(s) | 120, 1748, 2346, 2820 |
| BseAI | TCCGGA | 1 cut(s) | 358 |
| BseGI | GGATG | 8 cut(s) | 94, 346, 819, 1180, 1593, 1692, 1696, 2044 |
| BseJI | GATNNNNATC | 4 cut(s) | 120, 1748, 2346, 2820 |
| BseMI | GCAATG | 1 cut(s) | 1087 |
| BseMII | CTCAG | 3 cut(s) | 2433, 2484, 2819 |
| BseRI | GAGGAG | 6 cut(s) | 74, 1591, 1691, 2372, 2519, 2636 |
| BseSI | GKGCMC | 1 cut(s) | 1929 |
| BseX3I | CGGCCG | 1 cut(s) | 2709 |
| BseYI | CCCAGC | 1 cut(s) | 1860 |
| BsgI | GTGCAG | 1 cut(s) | 1202 |
| Bsh1236I | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| Bsh1285I | CGRYCG | 3 cut(s) | 892, 2236, 2712 |
| BshNI | GGYRCC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| BshTI | ACCGGT | 4 cut(s) | 891, 1478, 2051, 2795 |
| BsiEI | CGRYCG | 3 cut(s) | 892, 2236, 2712 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1583 |
| BsiHKCI | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| BslFI | GGGAC | 7 cut(s) | 308, 323, 343, 779, 1271, 1514, 2441 |
| BsmAI | GTCTC | 5 cut(s) | 1784, 2282, 2560, 2750, 2808 |
| BsmBI | CGTCTC | 2 cut(s) | 2282, 2560 |
| BsmFI | GGGAC | 7 cut(s) | 308, 323, 343, 779, 1271, 1514, 2441 |
| BsmI | GAATGC | 1 cut(s) | 1038 |
| Bso31I | GGTCTC | 3 cut(s) | 1784, 2750, 2808 |
| BsoBI | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| Bsp1286I | GDGCHC | 3 cut(s) | 272, 1583, 1929 |
| Bsp13I | TCCGGA | 1 cut(s) | 358 |
| Bsp19I | CCATGG | 2 cut(s) | 239, 1869 |
| BspCNI | CTCAG | 3 cut(s) | 2434, 2485, 2818 |
| BspEI | TCCGGA | 1 cut(s) | 358 |
| BspFNI | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| BspHI | TCATGA | 1 cut(s) | 2685 |
| BspMAI | CTGCAG | 2 cut(s) | 1743, 2545 |
| BspMI | ACCTGC | 1 cut(s) | 2371 |
| BspPI | GGATC | 8 cut(s) | 612, 853, 1003, 1826, 1980, 2092, 2220, 2595 |
| BspT107I | GGYRCC | 5 cut(s) | 507, 604, 800, 2048, 2792 |
| BspTNI | GGTCTC | 3 cut(s) | 1784, 2750, 2808 |
| BsrBI | CCGCTC | 3 cut(s) | 2425, 2605, 2770 |
| BsrDI | GCAATG | 1 cut(s) | 1087 |
| BsrFI | RCCGGY | 6 cut(s) | 891, 1478, 1915, 1998, 2051, 2795 |
| BssAI | RCCGGY | 6 cut(s) | 891, 1478, 1915, 1998, 2051, 2795 |
| BssNI | GRCGYC | 2 cut(s) | 1839, 2328 |
| BssSI | CACGAG | 3 cut(s) | 1220, 1771, 2609 |
| BssT1I | CCWWGG | 7 cut(s) | 78, 201, 239, 764, 1237, 1756, 1869 |
| Bst2BI | CACGAG | 3 cut(s) | 1220, 1771, 2609 |
| Bst6I | CTCTTC | 7 cut(s) | 743, 1529, 1782, 1976, 2054, 2312, 2750 |
| BstACI | GRCGYC | 2 cut(s) | 1839, 2328 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2549 |
| BstC8I | GCNNGC | 4 cut(s) | 873, 1268, 2332, 2658 |
| BstDEI | CTNAG | 7 cut(s) | 1160, 1169, 2442, 2457, 2493, 2719, 2805 |
| BstDSI | CCRYGG | 4 cut(s) | 239, 1869, 2598, 2616 |
| BstEII | GGTNACC | 1 cut(s) | 1348 |
| BstF5I | GGATG | 8 cut(s) | 94, 346, 819, 1180, 1593, 1692, 1696, 2044 |
| BstFNI | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| BstH2I | RGCGCY | 1 cut(s) | 1217 |
| BstHHI | GCGC | 3 cut(s) | 34, 1216, 2500 |
| BstMAI | GTCTC | 5 cut(s) | 1784, 2282, 2560, 2750, 2808 |
| BstMCI | CGRYCG | 3 cut(s) | 892, 2236, 2712 |
| BstNSI | RCATGY | 2 cut(s) | 1126, 1714 |
| BstPI | GGTNACC | 1 cut(s) | 1348 |
| BstSFI | CTRYAG | 2 cut(s) | 1739, 2541 |
| BstSLI | GKGCMC | 1 cut(s) | 1929 |
| BstUI | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| BstV2I | GAAGAC | 1 cut(s) | 852 |
| BstX2I | RGATCY | 3 cut(s) | 995, 1985, 2212 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 85, 306 |
| BstYI | RGATCY | 3 cut(s) | 995, 1985, 2212 |
| BstZI | CGGCCG | 1 cut(s) | 2709 |
| BsuI | GTATCC | 3 cut(s) | 832, 1811, 2162 |
| BtgI | CCRYGG | 4 cut(s) | 239, 1869, 2598, 2616 |
| BtgZI | GCGATG | 1 cut(s) | 1968 |
| BtsCI | GGATG | 8 cut(s) | 94, 346, 819, 1180, 1593, 1692, 1696, 2044 |
| BtsI | GCAGTG | 1 cut(s) | 1451 |
| BtsIMutI | CAGTG | 6 cut(s) | 1026, 1306, 1451, 1929, 1944, 2028 |
| BveI | ACCTGC | 1 cut(s) | 2371 |
| Cac8I | GCNNGC | 4 cut(s) | 873, 1268, 2332, 2658 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2161, 2549 |
| CciI | TCATGA | 1 cut(s) | 2685 |
| CfoI | GCGC | 3 cut(s) | 34, 1216, 2500 |
| Cfr10I | RCCGGY | 6 cut(s) | 891, 1478, 1915, 1998, 2051, 2795 |
| Cfr42I | CCGCGG | 1 cut(s) | 2601 |
| Cfr9I | CCCGGG | 4 cut(s) | 41, 1201, 2080, 2283 |
| CseI | GACGC | 3 cut(s) | 1157, 1847, 2336 |
| CspAI | ACCGGT | 4 cut(s) | 891, 1478, 2051, 2795 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 355, 390, 436, 471, 501, 536, 2280, 2315 |
| DdeI | CTNAG | 7 cut(s) | 1160, 1169, 2442, 2457, 2493, 2719, 2805 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 62 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 62 |
| EaeI | YGGCCR | 6 cut(s) | 1023, 1248, 1872, 2032, 2448, 2709 |
| EagI | CGGCCG | 1 cut(s) | 2709 |
| Eam1104I | CTCTTC | 7 cut(s) | 743, 1529, 1782, 1976, 2054, 2312, 2750 |
| EarI | CTCTTC | 7 cut(s) | 743, 1529, 1782, 1976, 2054, 2312, 2750 |
| EciI | GGCGGA | 1 cut(s) | 568 |
| Ecl136II | GAGCTC | 1 cut(s) | 1581 |
| EclXI | CGGCCG | 1 cut(s) | 2709 |
| Eco130I | CCWWGG | 7 cut(s) | 78, 201, 239, 764, 1237, 1756, 1869 |
| Eco147I | AGGCCT | 1 cut(s) | 1165 |
| Eco24I | GRGCYC | 2 cut(s) | 272, 1583 |
| Eco31I | GGTCTC | 3 cut(s) | 1784, 2750, 2808 |
| Eco32I | GATATC | 1 cut(s) | 1143 |
| Eco47I | GGWCC | 7 cut(s) | 236, 650, 793, 933, 1258, 1501, 2199 |
| Eco52I | CGGCCG | 1 cut(s) | 2709 |
| Eco53kI | GAGCTC | 1 cut(s) | 1581 |
| Eco57I | CTGAAG | 4 cut(s) | 1064, 1151, 2237, 2372 |
| Eco88I | CYCGRG | 6 cut(s) | 41, 722, 1031, 1201, 2080, 2283 |
| Eco91I | GGTNACC | 1 cut(s) | 1348 |
| EcoICRI | GAGCTC | 1 cut(s) | 1581 |
| EcoO109I | RGGNCCY | 4 cut(s) | 793, 933, 1006, 1258 |
| EcoO65I | GGTNACC | 1 cut(s) | 1348 |
| EcoRV | GATATC | 1 cut(s) | 1143 |
| EcoT14I | CCWWGG | 7 cut(s) | 78, 201, 239, 764, 1237, 1756, 1869 |
| EcoT38I | GRGCYC | 2 cut(s) | 272, 1583 |
| ErhI | CCWWGG | 7 cut(s) | 78, 201, 239, 764, 1237, 1756, 1869 |
| Esp3I | CGTCTC | 2 cut(s) | 2282, 2560 |
| FaqI | GGGAC | 7 cut(s) | 308, 323, 343, 779, 1271, 1514, 2441 |
| FauI | CCCGC | 8 cut(s) | 1333, 1366, 2128, 2418, 2493, 2605, 2733, 2763 |
| FblI | GTMKAC | 2 cut(s) | 909, 1119 |
| FokI | GGATG | 8 cut(s) | 101, 353, 826, 1187, 1580, 1699, 1703, 2051 |
| FriOI | GRGCYC | 2 cut(s) | 272, 1583 |
| GlaI | GCGC | 3 cut(s) | 33, 1215, 2499 |
| GsaI | CCCAGC | 1 cut(s) | 1864 |
| GsuI | CTGGAG | 3 cut(s) | 2435, 2603, 2732 |
| HaeII | RGCGCY | 1 cut(s) | 1217 |
| HgaI | GACGC | 3 cut(s) | 1157, 1847, 2336 |
| HhaI | GCGC | 3 cut(s) | 34, 1216, 2500 |
| Hin1I | GRCGYC | 2 cut(s) | 1839, 2328 |
| Hin6I | GCGC | 3 cut(s) | 32, 1214, 2498 |
| HinP1I | GCGC | 3 cut(s) | 32, 1214, 2498 |
| HphI | GGTGA | 9 cut(s) | 190, 992, 1360, 1835, 1985, 2032, 2069, 2395, 2495 |
| Hpy166II | GTNNAC | 8 cut(s) | 136, 910, 1056, 1120, 1306, 1826, 2028, 2317 |
| Hpy188III | TCNNGA | 9 cut(s) | 359, 653, 709, 724, 1031, 1835, 2512, 2582, 2686 |
| Hpy8I | GTNNAC | 8 cut(s) | 136, 910, 1056, 1120, 1306, 1826, 2028, 2317 |
| Hpy99I | CGWCG | 8 cut(s) | 59, 650, 853, 977, 1841, 2098, 2330, 2782 |
| HpyCH4IV | ACGT | 1 cut(s) | 2024 |
| HpyCH4V | TGCA | 5 cut(s) | 743, 1080, 1219, 1741, 2543 |
| HpyF3I | CTNAG | 7 cut(s) | 1160, 1169, 2442, 2457, 2493, 2719, 2805 |
| HpySE526I | ACGT | 1 cut(s) | 2024 |
| Hsp92I | GRCGYC | 2 cut(s) | 1839, 2328 |
| HspAI | GCGC | 3 cut(s) | 32, 1214, 2498 |
| Kpn2I | TCCGGA | 1 cut(s) | 358 |
| KpnI | GGTACC | 5 cut(s) | 511, 608, 804, 2052, 2796 |
| KspI | CCGCGG | 1 cut(s) | 2601 |
| LweI | GCATC | 5 cut(s) | 79, 646, 1684, 1723, 2011 |
| MaeII | ACGT | 1 cut(s) | 2024 |
| MaeIII | GTNAC | 6 cut(s) | 1015, 1348, 1381, 1846, 1962, 2020 |
| MbiI | CCGCTC | 3 cut(s) | 2425, 2605, 2770 |
| MflI | RGATCY | 3 cut(s) | 995, 1985, 2212 |
| MhlI | GDGCHC | 3 cut(s) | 272, 1583, 1929 |
| MlsI | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| MluCI | AATT | 7 cut(s) | 156, 347, 671, 772, 914, 1700, 2732 |
| MluNI | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| MlyI | GAGTC | 8 cut(s) | 233, 977, 1783, 2297, 2423, 2519, 2555, 2570 |
| MmeI | TCCRAC | 6 cut(s) | 51, 78, 81, 642, 996, 1779 |
| Mox20I | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| MroI | TCCGGA | 1 cut(s) | 358 |
| MscI | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| MseI | TTAA | 3 cut(s) | 675, 1703, 2694 |
| MslI | CAYNNNNRTG | 4 cut(s) | 304, 1103, 1715, 1901 |
| Msp20I | TGGCCA | 3 cut(s) | 1025, 1250, 2450 |
| MspA1I | CMGCKG | 5 cut(s) | 74, 1474, 2158, 2464, 2600 |
| Mva1269I | GAATGC | 1 cut(s) | 1038 |
| MvnI | CGCG | 5 cut(s) | 32, 215, 1299, 2500, 2600 |
| NcoI | CCATGG | 2 cut(s) | 239, 1869 |
| NmeAIII | GCCGAG | 1 cut(s) | 1074 |
| NmuCI | GTSAC | 3 cut(s) | 1348, 1846, 2020 |
| NspI | RCATGY | 2 cut(s) | 1126, 1714 |
| OliI | CACNNNNGTG | 1 cut(s) | 1901 |
| PaeR7I | CTCGAG | 1 cut(s) | 722 |
| PagI | TCATGA | 1 cut(s) | 2685 |
| PaqCI | CACCTGC | 1 cut(s) | 2371 |
| PasI | CCCWGGG | 1 cut(s) | 326 |
| PceI | AGGCCT | 1 cut(s) | 1165 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 606, 935, 2178, 2331 |
| PctI | GAATGC | 1 cut(s) | 1038 |
| PfeI | GAWTC | 7 cut(s) | 5, 50, 110, 169, 818, 1225, 2269 |
| PfoI | TCCNGGA | 1 cut(s) | 2748 |
| PinAI | ACCGGT | 4 cut(s) | 891, 1478, 2051, 2795 |
| PleI | GAGTC | 8 cut(s) | 232, 976, 1782, 2296, 2423, 2519, 2554, 2570 |
| PpsI | GAGTC | 8 cut(s) | 232, 976, 1782, 2296, 2423, 2519, 2554, 2570 |
| PpuMI | RGGWCCY | 3 cut(s) | 793, 933, 1258 |
| PshBI | ATTAAT | 1 cut(s) | 1703 |
| Psp124BI | GAGCTC | 1 cut(s) | 1583 |
| Psp5II | RGGWCCY | 3 cut(s) | 793, 933, 1258 |
| PspEI | GGTNACC | 1 cut(s) | 1348 |
| PspFI | CCCAGC | 1 cut(s) | 1860 |
| PspPPI | RGGWCCY | 3 cut(s) | 793, 933, 1258 |
| PstI | CTGCAG | 2 cut(s) | 1743, 2545 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2161, 2549 |
| PsuI | RGATCY | 3 cut(s) | 995, 1985, 2212 |
| PvuII | CAGCTG | 2 cut(s) | 1474, 2158 |
| RseI | CAYNNNNRTG | 4 cut(s) | 304, 1103, 1715, 1901 |
| SacI | GAGCTC | 1 cut(s) | 1583 |
| SacII | CCGCGG | 1 cut(s) | 2601 |
| SaqAI | TTAA | 3 cut(s) | 675, 1703, 2694 |
| ScaI | AGTACT | 1 cut(s) | 250 |
| SchI | GAGTC | 8 cut(s) | 233, 977, 1783, 2297, 2423, 2519, 2555, 2570 |
| SduI | GDGCHC | 3 cut(s) | 272, 1583, 1929 |
| SfaNI | GCATC | 5 cut(s) | 79, 646, 1684, 1723, 2011 |
| SfcI | CTRYAG | 2 cut(s) | 1739, 2541 |
| Sfr274I | CTCGAG | 1 cut(s) | 722 |
| Sfr303I | CCGCGG | 1 cut(s) | 2601 |
| SgrBI | CCGCGG | 1 cut(s) | 2601 |
| SinI | GGWCC | 7 cut(s) | 236, 650, 793, 933, 1258, 1501, 2199 |
| SlaI | CTCGAG | 1 cut(s) | 722 |
| SmaI | CCCGGG | 4 cut(s) | 43, 1203, 2082, 2285 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 304, 1103, 1715, 1901 |
| SmlI | CTYRAG | 2 cut(s) | 722, 2477 |
| SmoI | CTYRAG | 2 cut(s) | 722, 2477 |
| Sse9I | AATT | 7 cut(s) | 156, 347, 671, 772, 914, 1700, 2732 |
| SseBI | AGGCCT | 1 cut(s) | 1165 |
| SstI | GAGCTC | 1 cut(s) | 1583 |
| StuI | AGGCCT | 1 cut(s) | 1165 |
| StyI | CCWWGG | 7 cut(s) | 78, 201, 239, 764, 1237, 1756, 1869 |
| TaiI | ACGT | 1 cut(s) | 2027 |
| TaqII | GACCGA | 1 cut(s) | 1767 |
| TasI | AATT | 7 cut(s) | 156, 347, 671, 772, 914, 1700, 2732 |
| TatI | WGTACW | 2 cut(s) | 248, 2625 |
| TauI | GCSGC | 5 cut(s) | 74, 1129, 1378, 2608, 2711 |
| TfiI | GAWTC | 7 cut(s) | 5, 50, 110, 169, 818, 1225, 2269 |
| Tru1I | TTAA | 3 cut(s) | 675, 1703, 2694 |
| Tru9I | TTAA | 3 cut(s) | 675, 1703, 2694 |
| TscAI | CASTG | 6 cut(s) | 1026, 1313, 1451, 1929, 1951, 2035 |
| TseFI | GTSAC | 3 cut(s) | 1348, 1846, 2020 |
| Tsp45I | GTSAC | 3 cut(s) | 1348, 1846, 2020 |
| TspDTI | ATGAA | 8 cut(s) | 294, 1098, 1121, 1582, 2199, 2384, 2702, 2739 |
| TspGWI | ACGGA | 2 cut(s) | 1016, 1083 |
| TspMI | CCCGGG | 4 cut(s) | 41, 1201, 2080, 2283 |
| TspRI | CASTG | 6 cut(s) | 1026, 1313, 1451, 1929, 1951, 2035 |
| VpaK11BI | GGWCC | 7 cut(s) | 236, 650, 793, 933, 1258, 1501, 2199 |
| VspI | ATTAAT | 1 cut(s) | 1703 |
| XapI | RAATTY | 3 cut(s) | 347, 671, 2732 |
| XceI | RCATGY | 2 cut(s) | 1126, 1714 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 16 |
| XhoI | CTCGAG | 1 cut(s) | 722 |
| XmaI | CCCGGG | 4 cut(s) | 41, 1201, 2080, 2283 |
| XmaJI | CCTAGG | 1 cut(s) | 1756 |
| XmiI | GTMKAC | 2 cut(s) | 909, 1119 |
| ZrmI | AGTACT | 1 cut(s) | 250 |