Rmu_sc0003276.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003276.1
OG0000087
Physical Location & Seq
Forward (+)
22904 .. 23884
981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003276.1_g000004.1.cds

Sequence Viewer

Length: 855 bp
atgggaaaagtaccggccccagtgcctatttcctctcgttccactgggagcgatgaggcattactccccggtgagaagaagagatcccacaggcaccggcatcggactgataaggaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcacccgggatcagagtcgtcgccttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgcggttgaaaagttcgtgcggtccatgcttagggatctgaaggatattgacctcgaccgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgccgctaagcagcagatcgcggagcttaagggtgaggttgctgaggcgcgggaagaggtaaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaagaagaaggcagaccacttggaggatcgccttcccgcggagaggcacgaggtcgtggaggagtacaagtcctcggaagagctcatctctatgctggctgctgcccaagataaggctgtcattatgaagttcaaggagtgggtggcggccgggtatttagatgaagccaaattcaggcggggtctcctggagaaaaagaagaaggatcgggaggcggcggccaaatctggtgccggtgggtctcagagtactgatggcgatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

284

Amino Acids

31.46

Weight (kDa)

8.74

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 394
Acc36I ACCTGC 1 cut(s) 394
AccB1I GGYRCC 3 cut(s) 93, 162, 815
AccBSI CCGCTC 1 cut(s) 448
AccII CGCG 3 cut(s) 494, 523, 623
AclWI GGATC 5 cut(s) 78, 178, 306, 618, 798
AcoI YGGCCR 4 cut(s) 130, 471, 732, 804
AcsI RAATTY 1 cut(s) 755
AcuI CTGAAG 2 cut(s) 323, 395
AcyI GRCGYC 1 cut(s) 351
AfaI GTAC 7 cut(s) 12, 125, 148, 257, 341, 650, 835
AfiI CCNNNNNNNGG 9 cut(s) 191, 294, 322, 582, 607, 622, 627, 697, 759
AflII CTTAAG 1 cut(s) 500
AgsI TTSAA 3 cut(s) 272, 334, 718
AjnI CCWGG 1 cut(s) 771
AluBI AGCT 4 cut(s) 244, 436, 499, 667
AluI AGCT 4 cut(s) 244, 436, 499, 667
Alw21I GWGCWC 1 cut(s) 669
Alw26I GTCTC 3 cut(s) 583, 773, 831
AlwI GGATC 5 cut(s) 78, 178, 306, 618, 798
AlwNI CAGNNNCTG 2 cut(s) 247, 572
Ama87I CYCGRG 2 cut(s) 166, 543
AoxI GGCC 7 cut(s) 15, 130, 193, 429, 471, 732, 804
ApeKI GCWGC 6 cut(s) 241, 244, 484, 563, 683, 686
ApoI RAATTY 1 cut(s) 755
AspLEI GCGC 1 cut(s) 523
AspS9I GGNCC 2 cut(s) 16, 285
AsuC2I CCSGG 9 cut(s) 69, 134, 167, 168, 323, 400, 544, 545, 736
AsuHPI GGTGA 4 cut(s) 83, 130, 418, 518
AvaI CYCGRG 2 cut(s) 166, 543
AvaII GGWCC 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 328
BanI GGYRCC 3 cut(s) 93, 162, 815
BanII GRGCYC 1 cut(s) 669
BauI CACGAG 1 cut(s) 632
Bbv12I GWGCWC 1 cut(s) 669
BbvCI CCTCAGC 1 cut(s) 516
BbvI GCAGC 6 cut(s) 231, 253, 496, 550, 670, 673
BccI CCATC 3 cut(s) 242, 463, 833
BceAI ACGGC 1 cut(s) 560
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BciT130I CCWGG 1 cut(s) 773
BcnI CCSGG 9 cut(s) 69, 134, 167, 168, 323, 400, 544, 545, 736
BcoDI GTCTC 3 cut(s) 583, 773, 831
BfmI CTRYAG 1 cut(s) 564
BfrI CTTAAG 1 cut(s) 500
BfuAI ACCTGC 1 cut(s) 394
BlpI GCTNAGC 1 cut(s) 480
BmcAI AGTACT 1 cut(s) 835
Bme18I GGWCC 1 cut(s) 285
BmeT110I CYCGRG 2 cut(s) 166, 543
BmgT120I GGNCC 2 cut(s) 16, 285
BmiI GGNNCC 4 cut(s) 18, 95, 164, 817
BmrI ACTGGG 2 cut(s) 14, 54
BmsI GCATC 1 cut(s) 109
BmuI ACTGGG 2 cut(s) 14, 54
BplI GAGNNNNNCTC 4 cut(s) 437, 469, 656, 688
BpmI CTGGAG 2 cut(s) 458, 794
Bpu10I CCTNAGC 2 cut(s) 293, 516
Bpu1102I GCTNAGC 1 cut(s) 480
BpuMI CCSGG 9 cut(s) 69, 134, 167, 168, 323, 400, 544, 545, 736
BsaBI GATNNNNATC 2 cut(s) 369, 843
BsaHI GRCGYC 1 cut(s) 351
BsaI GGTCTC 2 cut(s) 773, 831
BsaJI CCNNGG 6 cut(s) 67, 142, 166, 543, 621, 657
BsaWI WCCGGW 1 cut(s) 214
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 638, 668
Bsc4I CCNNNNNNNGG 9 cut(s) 191, 294, 322, 582, 607, 622, 627, 697, 759
Bse118I RCCGGY 3 cut(s) 13, 96, 818
Bse1I ACTGG 4 cut(s) 20, 49, 133, 154
Bse8I GATNNNNATC 2 cut(s) 369, 843
BseBI CCWGG 1 cut(s) 773
BseDI CCNNGG 6 cut(s) 67, 142, 166, 543, 621, 657
BseGI GGATG 1 cut(s) 142
BseJI GATNNNNATC 2 cut(s) 369, 843
BseLI CCNNNNNNNGG 9 cut(s) 191, 294, 322, 582, 607, 622, 627, 697, 759
BseMII CTCAG 4 cut(s) 239, 456, 507, 842
BseNI ACTGG 4 cut(s) 20, 49, 133, 154
BseRI GAGGAG 2 cut(s) 395, 659
BseSI GKGCMC 1 cut(s) 328
BseX3I CGGCCG 1 cut(s) 732
BseXI GCAGC 6 cut(s) 231, 253, 496, 550, 670, 673
Bsh1236I CGCG 3 cut(s) 494, 523, 623
Bsh1285I CGRYCG 3 cut(s) 322, 735, 847
BshFI GGCC 7 cut(s) 17, 132, 195, 431, 473, 734, 806
BshNI GGYRCC 3 cut(s) 93, 162, 815
BsiEI CGRYCG 3 cut(s) 322, 735, 847
BsiHKAI GWGCWC 1 cut(s) 669
BsiHKCI CYCGRG 2 cut(s) 166, 543
BslFI GGGAC 2 cut(s) 464, 560
BslI CCNNNNNNNGG 9 cut(s) 191, 294, 322, 582, 607, 622, 627, 697, 759
BsmAI GTCTC 3 cut(s) 583, 773, 831
BsmBI CGTCTC 1 cut(s) 583
BsmFI GGGAC 2 cut(s) 464, 560
BsnI GGCC 7 cut(s) 17, 132, 195, 431, 473, 734, 806
Bso31I GGTCTC 2 cut(s) 773, 831
BsoBI CYCGRG 2 cut(s) 166, 543
Bsp1286I GDGCHC 2 cut(s) 328, 669
Bsp143I GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
Bsp1720I GCTNAGC 1 cut(s) 480
BspANI GGCC 7 cut(s) 17, 132, 195, 431, 473, 734, 806
BspCNI CTCAG 4 cut(s) 240, 457, 508, 841
BspFNI CGCG 3 cut(s) 494, 523, 623
BspLI GGNNCC 4 cut(s) 18, 95, 164, 817
BspMAI CTGCAG 1 cut(s) 568
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 5 cut(s) 78, 178, 306, 618, 798
BspQI GCTCTTC 1 cut(s) 657
BspT107I GGYRCC 3 cut(s) 93, 162, 815
BspTI CTTAAG 1 cut(s) 500
BspTNI GGTCTC 2 cut(s) 773, 831
BsrBI CCGCTC 1 cut(s) 448
BsrFI RCCGGY 3 cut(s) 13, 96, 818
BsrI ACTGG 4 cut(s) 20, 49, 133, 154
BssAI RCCGGY 3 cut(s) 13, 96, 818
BssECI CCNNGG 6 cut(s) 67, 142, 166, 543, 621, 657
BssMI GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
BssNI GRCGYC 1 cut(s) 351
BssSI CACGAG 1 cut(s) 632
BssT1I CCWWGG 1 cut(s) 142
Bst2BI CACGAG 1 cut(s) 632
Bst2UI CCWGG 1 cut(s) 773
Bst6I CTCTTC 5 cut(s) 74, 152, 335, 522, 657
BstACI GRCGYC 1 cut(s) 351
BstAFI CTTAAG 1 cut(s) 500
BstAPI GCANNNNNTGC 1 cut(s) 572
BstC8I GCNNGC 2 cut(s) 355, 681
BstDEI CTNAG 6 cut(s) 248, 293, 465, 480, 516, 828
BstDSI CCRYGG 1 cut(s) 621
BstF5I GGATG 1 cut(s) 142
BstFNI CGCG 3 cut(s) 494, 523, 623
BstHHI GCGC 1 cut(s) 523
BstKTI GATC 7 cut(s) 86, 173, 301, 492, 613, 793, 847
BstMAI GTCTC 3 cut(s) 583, 773, 831
BstMBI GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
BstMCI CGRYCG 3 cut(s) 322, 735, 847
BstMWI GCNNNNNNNGC 5 cut(s) 238, 289, 350, 470, 572
BstNI CCWGG 1 cut(s) 773
BstSFI CTRYAG 1 cut(s) 564
BstSLI GKGCMC 1 cut(s) 328
BstUI CGCG 3 cut(s) 494, 523, 623
BstV1I GCAGC 6 cut(s) 231, 253, 496, 550, 670, 673
BstX2I RGATCY 2 cut(s) 83, 298
BstXI CCANNNNNNTGG 1 cut(s) 149
BstYI RGATCY 2 cut(s) 83, 298
BstZI CGGCCG 1 cut(s) 732
BsuRI GGCC 7 cut(s) 17, 132, 195, 431, 473, 734, 806
BtgI CCRYGG 1 cut(s) 621
BtgZI GCGATG 1 cut(s) 66
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 3 cut(s) 27, 42, 126
BveI ACCTGC 1 cut(s) 394
Cac8I GCNNGC 2 cut(s) 355, 681
CaiI CAGNNNCTG 2 cut(s) 247, 572
CfoI GCGC 1 cut(s) 523
Cfr10I RCCGGY 3 cut(s) 13, 96, 818
Cfr13I GGNCC 2 cut(s) 16, 285
Cfr42I CCGCGG 1 cut(s) 624
Cfr9I CCCGGG 2 cut(s) 166, 543
CseI GACGC 1 cut(s) 359
Csp6I GTAC 7 cut(s) 11, 124, 147, 256, 340, 649, 834
CviAII CATG 3 cut(s) 289, 419, 582
CviQI GTAC 7 cut(s) 11, 124, 147, 256, 340, 649, 834
DdeI CTNAG 6 cut(s) 248, 293, 465, 480, 516, 828
DpnI GATC 7 cut(s) 85, 172, 300, 491, 612, 792, 846
DpnII GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
EaeI YGGCCR 4 cut(s) 130, 471, 732, 804
EagI CGGCCG 1 cut(s) 732
Eam1104I CTCTTC 5 cut(s) 74, 152, 335, 522, 657
EarI CTCTTC 5 cut(s) 74, 152, 335, 522, 657
Ecl136II GAGCTC 1 cut(s) 667
EclXI CGGCCG 1 cut(s) 732
Eco130I CCWWGG 1 cut(s) 142
Eco24I GRGCYC 1 cut(s) 669
Eco31I GGTCTC 2 cut(s) 773, 831
Eco47I GGWCC 1 cut(s) 285
Eco52I CGGCCG 1 cut(s) 732
Eco53kI GAGCTC 1 cut(s) 667
Eco57I CTGAAG 2 cut(s) 323, 395
Eco88I CYCGRG 2 cut(s) 166, 543
EcoICRI GAGCTC 1 cut(s) 667
EcoRII CCWGG 1 cut(s) 771
EcoT14I CCWWGG 1 cut(s) 142
EcoT38I GRGCYC 1 cut(s) 669
ErhI CCWWGG 1 cut(s) 142
Esp3I CGTCTC 1 cut(s) 583
FaeI CATG 3 cut(s) 292, 422, 585
FaiI YATR 5 cut(s) 290, 420, 583, 677, 710
FaqI GGGAC 2 cut(s) 464, 560
FatI CATG 3 cut(s) 288, 418, 581
FauI CCCGC 5 cut(s) 214, 441, 516, 628, 756
FokI GGATG 1 cut(s) 149
FriOI GRGCYC 1 cut(s) 669
GlaI GCGC 1 cut(s) 522
GsuI CTGGAG 2 cut(s) 458, 794
HaeIII GGCC 7 cut(s) 17, 132, 195, 431, 473, 734, 806
HgaI GACGC 1 cut(s) 359
HhaI GCGC 1 cut(s) 523
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 3 cut(s) 292, 422, 585
Hin6I GCGC 1 cut(s) 521
HinP1I GCGC 1 cut(s) 521
HinfI GANTC 4 cut(s) 176, 452, 548, 569
HphI GGTGA 4 cut(s) 83, 130, 418, 518
Hpy166II GTNNAC 2 cut(s) 126, 340
Hpy188I TCNGA 7 cut(s) 105, 175, 303, 375, 553, 661, 831
Hpy188III TCNNGA 1 cut(s) 794
Hpy8I GTNNAC 2 cut(s) 126, 340
Hpy99I CGWCG 1 cut(s) 184
HpyAV CCTTC 8 cut(s) 195, 298, 370, 421, 436, 586, 626, 781
HpyCH4IV ACGT 1 cut(s) 122
HpyCH4V TGCA 2 cut(s) 418, 566
HpyF10VI GCNNNNNNNGC 5 cut(s) 238, 289, 350, 470, 572
HpyF3I CTNAG 6 cut(s) 248, 293, 465, 480, 516, 828
HpySE526I ACGT 1 cut(s) 122
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 3 cut(s) 292, 422, 585
HspAI GCGC 1 cut(s) 521
KspI CCGCGG 1 cut(s) 624
Kzo9I GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 3 cut(s) 48, 445, 496
Lsp1109I GCAGC 6 cut(s) 231, 253, 496, 550, 670, 673
LweI GCATC 1 cut(s) 109
MaeII ACGT 1 cut(s) 122
MaeIII GTNAC 1 cut(s) 118
MalI GATC 7 cut(s) 85, 172, 300, 491, 612, 792, 846
MbiI CCGCTC 1 cut(s) 448
MboI GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
MflI RGATCY 2 cut(s) 83, 298
MhlI GDGCHC 2 cut(s) 328, 669
MluCI AATT 1 cut(s) 755
MlyI GAGTC 4 cut(s) 185, 446, 542, 578
MseI TTAA 1 cut(s) 501
MslI CAYNNNNRTG 1 cut(s) 674
MspA1I CMGCKG 2 cut(s) 244, 623
MspCI CTTAAG 1 cut(s) 500
MvaI CCWGG 1 cut(s) 773
MvnI CGCG 3 cut(s) 494, 523, 623
MwoI GCNNNNNNNGC 5 cut(s) 238, 289, 350, 470, 572
NciI CCSGG 9 cut(s) 69, 134, 167, 168, 323, 400, 544, 545, 736
NdeII GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
NlaIII CATG 3 cut(s) 292, 422, 585
NlaIV GGNNCC 4 cut(s) 18, 95, 164, 817
NmuCI GTSAC 1 cut(s) 118
PaqCI CACCTGC 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 657
PfoI TCCNGGA 1 cut(s) 771
Ple19I CGATCG 1 cut(s) 847
PleI GAGTC 4 cut(s) 184, 446, 542, 577
PpsI GAGTC 4 cut(s) 184, 446, 542, 577
Psp124BI GAGCTC 1 cut(s) 669
Psp6I CCWGG 1 cut(s) 771
PspGI CCWGG 1 cut(s) 771
PspN4I GGNNCC 4 cut(s) 18, 95, 164, 817
PspPI GGNCC 2 cut(s) 16, 285
PstI CTGCAG 1 cut(s) 568
PstNI CAGNNNCTG 2 cut(s) 247, 572
PsuI RGATCY 2 cut(s) 83, 298
PvuI CGATCG 1 cut(s) 847
PvuII CAGCTG 1 cut(s) 244
RsaI GTAC 7 cut(s) 12, 125, 148, 257, 341, 650, 835
RsaNI GTAC 7 cut(s) 11, 124, 147, 256, 340, 649, 834
RseI CAYNNNNRTG 1 cut(s) 674
SacI GAGCTC 1 cut(s) 669
SacII CCGCGG 1 cut(s) 624
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 1 cut(s) 501
Sau3AI GATC 7 cut(s) 83, 170, 298, 489, 610, 790, 844
Sau96I GGNCC 2 cut(s) 16, 285
ScaI AGTACT 1 cut(s) 835
SchI GAGTC 4 cut(s) 185, 446, 542, 578
SduI GDGCHC 2 cut(s) 328, 669
SfaNI GCATC 1 cut(s) 109
SfcI CTRYAG 1 cut(s) 564
Sfr303I CCGCGG 1 cut(s) 624
SgrBI CCGCGG 1 cut(s) 624
SinI GGWCC 1 cut(s) 285
SmaI CCCGGG 2 cut(s) 168, 545
SmiMI CAYNNNNRTG 1 cut(s) 674
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
Sse9I AATT 1 cut(s) 755
SstI GAGCTC 1 cut(s) 669
StyI CCWWGG 1 cut(s) 142
TaiI ACGT 1 cut(s) 125
TaqI TCGA 1 cut(s) 318
TasI AATT 1 cut(s) 755
TatI WGTACW 2 cut(s) 648, 833
TauI GCSGC 5 cut(s) 476, 479, 734, 803, 806
Tru1I TTAA 1 cut(s) 501
Tru9I TTAA 1 cut(s) 501
TscAI CASTG 3 cut(s) 27, 49, 133
TseFI GTSAC 1 cut(s) 118
TseI GCWGC 6 cut(s) 241, 244, 484, 563, 683, 686
Tsp45I GTSAC 1 cut(s) 118
TspDTI ATGAA 2 cut(s) 725, 762
TspMI CCCGGG 2 cut(s) 166, 543
TspRI CASTG 3 cut(s) 27, 49, 133
Vha464I CTTAAG 1 cut(s) 500
VpaK11BI GGWCC 1 cut(s) 285
XapI RAATTY 1 cut(s) 755
XmaI CCCGGG 2 cut(s) 166, 543
ZrmI AGTACT 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.