Rmu_sc0000643.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000643.1
OG0000087
Physical Location & Seq
Forward (+)
23381 .. 25127
1747 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000643.1_g000006.1.cds

Sequence Viewer

Length: 1206 bp
ctgtaccgggtcttatacttgaggaaacagtcttgtcaaggtaccgtgacgttcgtcaccctggactatgtggccctagttaccgatatgcctacttctcagagcaagaggtggaggaataaagtgtttcttgctggaggacattggcagattaggaataagaaatggcacctaacggtgaaagtgccgaagcggaaacctcggaaaggtaaggaggacgacaagatgaatgacaacaagctgatggatatgctcatgagccaaggagaggatgctctgcatattgaagttgacctggggtcgaaggcaatgggtcgctcaattgaggagtttctcctcgagattcatgataaagggtacgggaaccctgatcttgacgcccccgttactcagagtgagcagcccactgccagggacggggttaccattgctgatcccgggaggggaaaggcgccagtgtctggctctgtctcttcaagtttcgctgggtcagctggaagggaagaggtcctgcttccgggtgagaagaagaggttccataggcacggtcatcagagtggggataaggaggaggttacttacaccggtcgagatgttacagggacggtgcccaagaggcagaagaaaagtcattcgggactagagctggtgccgtcacttggtatgttatctccagcagtaccactagtccccaaaaagcccataaagcaactgttgagtgactacgaggttgctgatgagaagttcgtgcgctctatgctcatagatttgaaagatatagacctcgaccgggtacgggcgaaggacaaccccccacaagagaatcgtcgtctcgctcgggaatcaatgatgcgggaggaggttagcaacctctccgggcaagtgaagtatcttcatggggagaagtcaaaccgggagaaggagcgggactccttgaagatgaaggtagactccttgactcccaaggtagccgaactggaggcggcgaagacgaggatggcggagcttgagggtgaactagccagggacaaggccgtgatcatgaagtacaaggagtgggtggcatctaggtacttggatgaggctaaattcaggcgggcacttctcgagaagaagaagaaggaacaggaggtcaagggggaagaacaaggaaaccagggttccagaaccgagggagggtcaagtggtggtcaccctgatgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

401

Amino Acids

45.14

Weight (kDa)

9.34

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 41
AccB1I GGYRCC 5 cut(s) 41, 168, 451, 607, 649
AccB7I CCANNNNNTGG 1 cut(s) 461
AccBSI CCGCTC 1 cut(s) 925
AccI GTMKAC 1 cut(s) 948
AciI CCGC 6 cut(s) 193, 853, 925, 983, 1001, 1096
AclWI GGATC 1 cut(s) 428
AcsI RAATTY 1 cut(s) 1088
AcyI GRCGYC 2 cut(s) 378, 452
AfaI GTAC 7 cut(s) 5, 43, 359, 681, 795, 1049, 1073
AgeI ACCGGT 1 cut(s) 584
AgsI TTSAA 4 cut(s) 287, 477, 772, 937
AhdI GACNNNNNGTC 1 cut(s) 298
AhlI ACTAGT 1 cut(s) 685
AjnI CCWGG 5 cut(s) 60, 294, 410, 1022, 1155
AluBI AGCT 4 cut(s) 241, 494, 646, 1006
AluI AGCT 4 cut(s) 241, 494, 646, 1006
Alw26I GTCTC 2 cut(s) 475, 836
AlwI GGATC 1 cut(s) 428
AlwNI CAGNNNCTG 1 cut(s) 461
Ama87I CYCGRG 4 cut(s) 338, 437, 837, 1106
AoxI GGCC 2 cut(s) 72, 1032
ApeKI GCWGC 1 cut(s) 400
ApoI RAATTY 1 cut(s) 1088
AsiGI ACCGGT 1 cut(s) 584
Asp700I GAANNNNTTC 1 cut(s) 533
Asp718I GGTACC 1 cut(s) 41
AspLEI GCGC 2 cut(s) 454, 753
AspS9I GGNCC 2 cut(s) 73, 508
AsuC2I CCSGG 7 cut(s) 8, 438, 439, 519, 791, 877, 914
AsuHPI GGTGA 5 cut(s) 49, 190, 533, 1025, 1184
AvaI CYCGRG 4 cut(s) 338, 437, 837, 1106
AvaII GGWCC 1 cut(s) 508
BaeGI GKGCMC 2 cut(s) 612, 1102
BanI GGYRCC 5 cut(s) 41, 168, 451, 607, 649
BbsI GAAGAC 1 cut(s) 995
BbvI GCAGC 1 cut(s) 412
BccI CCATC 2 cut(s) 238, 991
BceAI ACGGC 2 cut(s) 637, 1019
BciT130I CCWGG 5 cut(s) 62, 296, 412, 1024, 1157
BclI TGATCA 1 cut(s) 1038
BcnI CCSGG 7 cut(s) 8, 438, 439, 519, 791, 877, 914
BcoDI GTCTC 2 cut(s) 475, 836
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 5 cut(s) 77, 641, 686, 1019, 1068
BfoI RGCGCY 1 cut(s) 455
BglI GCCNNNNNGGC 1 cut(s) 616
BisI GCNGC 2 cut(s) 401, 984
BlsI GCNGC 2 cut(s) 402, 985
Bme18I GGWCC 1 cut(s) 508
BmeRI GACNNNNNGTC 1 cut(s) 298
BmeT110I CYCGRG 4 cut(s) 338, 437, 837, 1106
BmgT120I GGNCC 2 cut(s) 73, 508
BmiI GGNNCC 8 cut(s) 43, 170, 365, 453, 536, 609, 651, 1162
BmsI GCATC 3 cut(s) 262, 840, 1073
BoxI GACNNNNGTC 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 995
BplI GAGNNNNNCTC 2 cut(s) 914, 946
BpmI CTGGAG 3 cut(s) 156, 657, 998
BpuEI CTTGAG 2 cut(s) 40, 1028
BpuMI CCSGG 7 cut(s) 8, 438, 439, 519, 791, 877, 914
BsaHI GRCGYC 2 cut(s) 378, 452
BsaWI WCCGGW 1 cut(s) 584
Bse118I RCCGGY 1 cut(s) 584
Bse1I ACTGG 2 cut(s) 455, 981
Bse3DI GCAATG 2 cut(s) 315, 426
BseBI CCWGG 5 cut(s) 62, 296, 412, 1024, 1157
BseGI GGATG 3 cut(s) 277, 1002, 1084
BseMI GCAATG 2 cut(s) 315, 426
BseMII CTCAG 2 cut(s) 113, 404
BseNI ACTGG 2 cut(s) 455, 981
BseRI GAGGAG 4 cut(s) 326, 341, 584, 872
BseSI GKGCMC 2 cut(s) 612, 1102
BseXI GCAGC 1 cut(s) 412
BseYI CCCAGC 1 cut(s) 485
Bsh1285I CGRYCG 2 cut(s) 589, 790
BshFI GGCC 2 cut(s) 74, 1034
BshNI GGYRCC 5 cut(s) 41, 168, 451, 607, 649
BshTI ACCGGT 1 cut(s) 584
BsiEI CGRYCG 2 cut(s) 589, 790
BsiHKCI CYCGRG 4 cut(s) 338, 437, 837, 1106
BsiSI CCGG 7 cut(s) 7, 438, 518, 585, 790, 876, 913
BslFI GGGAC 6 cut(s) 428, 616, 651, 674, 941, 1040
BsmAI GTCTC 2 cut(s) 475, 836
BsmBI CGTCTC 1 cut(s) 836
BsmFI GGGAC 6 cut(s) 428, 616, 651, 674, 941, 1040
BsnI GGCC 2 cut(s) 74, 1034
BsoBI CYCGRG 4 cut(s) 338, 437, 837, 1106
Bsp1286I GDGCHC 2 cut(s) 612, 1102
Bsp143I GATC 3 cut(s) 370, 433, 1038
BspACI CCGC 6 cut(s) 193, 853, 925, 983, 1001, 1096
BspANI GGCC 2 cut(s) 74, 1034
BspCNI CTCAG 2 cut(s) 112, 403
BspHI TCATGA 3 cut(s) 255, 346, 1041
BspLI GGNNCC 8 cut(s) 43, 170, 365, 453, 536, 609, 651, 1162
BspPI GGATC 1 cut(s) 428
BspT107I GGYRCC 5 cut(s) 41, 168, 451, 607, 649
BsrBI CCGCTC 1 cut(s) 925
BsrDI GCAATG 2 cut(s) 315, 426
BsrFI RCCGGY 1 cut(s) 584
BsrI ACTGG 2 cut(s) 455, 981
BssAI RCCGGY 1 cut(s) 584
BssMI GATC 3 cut(s) 370, 433, 1038
BssNI GRCGYC 2 cut(s) 378, 452
BssT1I CCWWGG 2 cut(s) 262, 963
Bst2UI CCWGG 5 cut(s) 62, 296, 412, 1024, 1157
Bst4CI ACNGT 6 cut(s) 30, 46, 178, 548, 607, 714
Bst6I CTCTTC 3 cut(s) 478, 498, 524
BstACI GRCGYC 2 cut(s) 378, 452
BstC8I GCNNGC 1 cut(s) 1098
BstDEI CTNAG 2 cut(s) 99, 390
BstEII GGTNACC 2 cut(s) 421, 1190
BstENI CCTNNNNNAGG 1 cut(s) 204
BstF5I GGATG 3 cut(s) 277, 1002, 1084
BstH2I RGCGCY 1 cut(s) 455
BstHHI GCGC 2 cut(s) 454, 753
BstKTI GATC 3 cut(s) 373, 436, 1041
BstMAI GTCTC 2 cut(s) 475, 836
BstMBI GATC 3 cut(s) 370, 433, 1038
BstMCI CGRYCG 2 cut(s) 589, 790
BstMWI GCNNNNNNNGC 4 cut(s) 491, 616, 706, 757
BstNI CCWGG 5 cut(s) 62, 296, 412, 1024, 1157
BstPAI GACNNNNGTC 1 cut(s) 53
BstPI GGTNACC 2 cut(s) 421, 1190
BstSLI GKGCMC 2 cut(s) 612, 1102
BstV1I GCAGC 1 cut(s) 412
BstV2I GAAGAC 1 cut(s) 995
BsuRI GGCC 2 cut(s) 74, 1034
BtsCI GGATG 3 cut(s) 277, 1002, 1084
BtsI GCAGTG 1 cut(s) 405
BtsIMutI CAGTG 2 cut(s) 405, 462
Cac8I GCNNGC 1 cut(s) 1098
CaiI CAGNNNCTG 1 cut(s) 461
CciI TCATGA 3 cut(s) 255, 346, 1041
CfoI GCGC 2 cut(s) 454, 753
Cfr10I RCCGGY 1 cut(s) 584
Cfr13I GGNCC 2 cut(s) 73, 508
Cfr9I CCCGGG 1 cut(s) 437
CseI GACGC 1 cut(s) 386
Csp6I GTAC 7 cut(s) 4, 42, 358, 680, 794, 1048, 1072
CspAI ACCGGT 1 cut(s) 584
CviAII CATG 4 cut(s) 256, 347, 896, 1042
CviQI GTAC 7 cut(s) 4, 42, 358, 680, 794, 1048, 1072
DdeI CTNAG 2 cut(s) 99, 390
DinI GGCGCC 1 cut(s) 453
DpnI GATC 3 cut(s) 372, 435, 1040
DpnII GATC 3 cut(s) 370, 433, 1038
DriI GACNNNNNGTC 1 cut(s) 298
Eam1104I CTCTTC 3 cut(s) 478, 498, 524
Eam1105I GACNNNNNGTC 1 cut(s) 298
EarI CTCTTC 3 cut(s) 478, 498, 524
EciI GGCGGA 1 cut(s) 1016
Eco130I CCWWGG 2 cut(s) 262, 963
Eco47I GGWCC 1 cut(s) 508
Eco88I CYCGRG 4 cut(s) 338, 437, 837, 1106
Eco91I GGTNACC 2 cut(s) 421, 1190
EcoNI CCTNNNNNAGG 1 cut(s) 204
EcoO109I RGGNCCY 1 cut(s) 508
EcoO65I GGTNACC 2 cut(s) 421, 1190
EcoRII CCWGG 5 cut(s) 60, 294, 410, 1022, 1155
EcoT14I CCWWGG 2 cut(s) 262, 963
EgeI GGCGCC 1 cut(s) 453
EheI GGCGCC 1 cut(s) 453
ErhI CCWWGG 2 cut(s) 262, 963
Esp3I CGTCTC 1 cut(s) 836
FaeI CATG 4 cut(s) 259, 350, 899, 1045
FalI AAGNNNNNCTT 2 cut(s) 114, 146
FaqI GGGAC 6 cut(s) 428, 616, 651, 674, 941, 1040
FatI CATG 4 cut(s) 255, 346, 895, 1041
FauI CCCGC 3 cut(s) 846, 918, 1089
FbaI TGATCA 1 cut(s) 1038
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 2 cut(s) 401, 984
FokI GGATG 3 cut(s) 284, 1009, 1091
Fsp4HI GCNGC 2 cut(s) 401, 984
FspBI CTAG 5 cut(s) 77, 641, 686, 1019, 1068
GlaI GCGC 2 cut(s) 453, 752
GluI GCNGC 2 cut(s) 401, 984
GsaI CCCAGC 1 cut(s) 489
GsuI CTGGAG 3 cut(s) 156, 657, 998
HaeII RGCGCY 1 cut(s) 455
HaeIII GGCC 2 cut(s) 74, 1034
HapII CCGG 7 cut(s) 7, 438, 518, 585, 790, 876, 913
HgaI GACGC 1 cut(s) 386
HhaI GCGC 2 cut(s) 454, 753
Hin1I GRCGYC 2 cut(s) 378, 452
Hin1II CATG 4 cut(s) 259, 350, 899, 1045
Hin6I GCGC 2 cut(s) 452, 751
HinP1I GCGC 2 cut(s) 452, 751
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 6 cut(s) 343, 823, 842, 929, 950, 958
HpaII CCGG 7 cut(s) 7, 438, 518, 585, 790, 876, 913
HphI GGTGA 5 cut(s) 49, 190, 533, 1025, 1184
Hpy166II GTNNAC 3 cut(s) 292, 949, 1016
Hpy188I TCNGA 4 cut(s) 102, 204, 393, 555
Hpy8I GTNNAC 3 cut(s) 292, 949, 1016
Hpy99I CGWCG 1 cut(s) 831
HpyAV CCTTC 6 cut(s) 298, 492, 796, 913, 937, 1114
HpyCH4III ACNGT 6 cut(s) 30, 46, 178, 548, 607, 714
HpyCH4IV ACGT 1 cut(s) 50
HpyCH4V TGCA 1 cut(s) 280
HpyF10VI GCNNNNNNNGC 4 cut(s) 491, 616, 706, 757
HpyF3I CTNAG 2 cut(s) 99, 390
HpySE526I ACGT 1 cut(s) 50
Hsp92I GRCGYC 2 cut(s) 378, 452
Hsp92II CATG 4 cut(s) 259, 350, 899, 1045
HspAI GCGC 2 cut(s) 452, 751
KasI GGCGCC 1 cut(s) 451
KpnI GGTACC 1 cut(s) 45
Ksp22I TGATCA 1 cut(s) 1038
Kzo9I GATC 3 cut(s) 370, 433, 1038
LmnI GCTCC 2 cut(s) 922, 1003
Lsp1109I GCAGC 1 cut(s) 412
LweI GCATC 3 cut(s) 262, 840, 1073
MaeI CTAG 5 cut(s) 77, 641, 686, 1019, 1068
MaeII ACGT 1 cut(s) 50
MalI GATC 3 cut(s) 372, 435, 1040
MbiI CCGCTC 1 cut(s) 925
MboI GATC 3 cut(s) 370, 433, 1038
MfeI CAATTG 1 cut(s) 321
MhlI GDGCHC 2 cut(s) 612, 1102
MluCI AATT 2 cut(s) 321, 1088
Mly113I GGCGCC 1 cut(s) 452
MlyI GAGTC 3 cut(s) 923, 944, 952
MroXI GAANNNNTTC 1 cut(s) 533
MslI CAYNNNNRTG 2 cut(s) 555, 1197
MspA1I CMGCKG 1 cut(s) 494
MspI CCGG 7 cut(s) 7, 438, 518, 585, 790, 876, 913
MunI CAATTG 1 cut(s) 321
MvaI CCWGG 5 cut(s) 62, 296, 412, 1024, 1157
MwoI GCNNNNNNNGC 4 cut(s) 491, 616, 706, 757
NarI GGCGCC 1 cut(s) 452
NciI CCSGG 7 cut(s) 8, 438, 439, 519, 791, 877, 914
NdeII GATC 3 cut(s) 370, 433, 1038
NlaIII CATG 4 cut(s) 259, 350, 899, 1045
NlaIV GGNNCC 8 cut(s) 43, 170, 365, 453, 536, 609, 651, 1162
NmuCI GTSAC 5 cut(s) 46, 55, 654, 719, 1190
PaeR7I CTCGAG 2 cut(s) 338, 1106
PagI TCATGA 3 cut(s) 255, 346, 1041
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 3 cut(s) 343, 823, 842
PflMI CCANNNNNTGG 1 cut(s) 461
PinAI ACCGGT 1 cut(s) 584
PkrI GCNGC 2 cut(s) 402, 985
PleI GAGTC 3 cut(s) 923, 944, 952
PluTI GGCGCC 1 cut(s) 455
PpsI GAGTC 3 cut(s) 923, 944, 952
PpuMI RGGWCCY 1 cut(s) 508
PshAI GACNNNNGTC 1 cut(s) 53
Psp5II RGGWCCY 1 cut(s) 508
Psp6I CCWGG 5 cut(s) 60, 294, 410, 1022, 1155
PspEI GGTNACC 2 cut(s) 421, 1190
PspFI CCCAGC 1 cut(s) 485
PspGI CCWGG 5 cut(s) 60, 294, 410, 1022, 1155
PspN4I GGNNCC 8 cut(s) 43, 170, 365, 453, 536, 609, 651, 1162
PspPI GGNCC 2 cut(s) 73, 508
PspPPI RGGWCCY 1 cut(s) 508
PstNI CAGNNNCTG 1 cut(s) 461
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 7 cut(s) 5, 43, 359, 681, 795, 1049, 1073
RsaNI GTAC 7 cut(s) 4, 42, 358, 680, 794, 1048, 1072
RseI CAYNNNNRTG 2 cut(s) 555, 1197
SatI GCNGC 2 cut(s) 401, 984
Sau3AI GATC 3 cut(s) 370, 433, 1038
Sau96I GGNCC 2 cut(s) 73, 508
SchI GAGTC 3 cut(s) 923, 944, 952
SduI GDGCHC 2 cut(s) 612, 1102
SfaNI GCATC 3 cut(s) 262, 840, 1073
SfoI GGCGCC 1 cut(s) 453
Sfr274I CTCGAG 2 cut(s) 338, 1106
SinI GGWCC 1 cut(s) 508
SlaI CTCGAG 2 cut(s) 338, 1106
SmaI CCCGGG 1 cut(s) 439
SmiMI CAYNNNNRTG 2 cut(s) 555, 1197
SmlI CTYRAG 4 cut(s) 19, 338, 1007, 1106
SmoI CTYRAG 4 cut(s) 19, 338, 1007, 1106
SpeI ACTAGT 1 cut(s) 685
Sse9I AATT 2 cut(s) 321, 1088
SsiI CCGC 6 cut(s) 193, 853, 925, 983, 1001, 1096
SspDI GGCGCC 1 cut(s) 451
SspMI CTAG 5 cut(s) 77, 641, 686, 1019, 1068
StyI CCWWGG 2 cut(s) 262, 963
TaaI ACNGT 6 cut(s) 30, 46, 178, 548, 607, 714
TaiI ACGT 1 cut(s) 53
TaqI TCGA 5 cut(s) 302, 339, 589, 786, 1107
TasI AATT 2 cut(s) 321, 1088
TatI WGTACW 1 cut(s) 1047
TauI GCSGC 1 cut(s) 986
TfiI GAWTC 3 cut(s) 343, 823, 842
TscAI CASTG 2 cut(s) 412, 462
TseFI GTSAC 5 cut(s) 46, 55, 654, 719, 1190
TseI GCWGC 1 cut(s) 400
Tsp45I GTSAC 5 cut(s) 46, 55, 654, 719, 1190
TspDTI ATGAA 5 cut(s) 242, 335, 884, 956, 1058
TspMI CCCGGG 1 cut(s) 437
TspRI CASTG 2 cut(s) 412, 462
Van91I CCANNNNNTGG 1 cut(s) 461
VpaK11BI GGWCC 1 cut(s) 508
XagI CCTNNNNNAGG 1 cut(s) 204
XapI RAATTY 1 cut(s) 1088
XhoI CTCGAG 2 cut(s) 338, 1106
XmaI CCCGGG 1 cut(s) 437
XmiI GTMKAC 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 533
XspI CTAG 5 cut(s) 77, 641, 686, 1019, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.