Rmu_sc0003092.1_g000012

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003092.1
OG0000087
Physical Location & Seq
Forward (+)
20819 .. 22815
1997 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003092.1_g000012.1.cds

Sequence Viewer

Length: 1725 bp
atgaatgagatcatcgccatgcgactgaagtggggaataccggacgcggtggagcttaggcctctcagggatggagagatggccgcgaatcttgccccggggtgggtggtgctacacaagaatcagttccaccaagggttatcgctaccgctgccccggtgcctacagtatctgttgcggatgctgaacctgtcaccggggcaggtcctgtactcaaggaagctgtcctgtgcgggtacggttacatttgccgctagggattacgaaccattagttaccgacatgccttcctcgatgagcaaaaggtggaggaacaaagtattcctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccaggcttatactttatccgaggtagaaaggaagaggatagcccgggtatatgctgtttggtcagagaaagagaggagctcttatagattcatccggcattctatactttataggctagggctaggatggctccccgtgaaaacgccgaagaggaaaccccggaaaggcaaagaggattacagaatggatgatgatcagttgatggatatgctgatgggccagagagaagacgcccttcacatcgatgtcgacctagggtcgaaaggtatgggtcggttcgttgaagagaccctactggagatcaccgatgcgggatatggggaacctgatcttgacgctcccgtgacccaagtcgtgcagccctctgttgctgacatcatcacgatagatgatatcgggacgggaaaggtaccggcccccgtgtctatttcctctcgttccactgggagcgatgaggcattgcttcccggtgagaagaaaagatcccataggcaccggcaccgaagtgataagcaggaggtgacgtataccggccgggatgttcagggattcggtgcgaagaggcagaagaaaaatcacccgggacctgagtcgtcgccttcacttggcttgttgtctcctgccattctggtaatccccaagaagcctatcaagcagctgttgagtgagtatagggttgccgatgaaaagttcgtgcggtccatgcttagtgacctgaagcacattgacctcgaccgggtgagggccaaggacaatacgcccaaagagaatcgccgtctcgcccgggaatccatgatgcgggcactcttcaatgtgtacgcgactgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatctgcatggcgagaaggccaagatggagaaggagcgggactcattgatggctaagatggacgcggctaagcagcgaatcgtggagcttgagggtgaagtctctgaggcgcgagaagaggtgaaaagcgctcgggactctgagaaaaaagctgcagagtctgccgtgtcatggaaggagaaggcagactacttagaggatcgccttcccgtggagaagcacgaggctgtggaggagtacaagtcctcccaagagctcatttctatgctaactgctgctcaagataaggctgtcatcatgaagttcaaggagtgggtggtggccgggtacctggatgaagccaaattcagacggggtcttctggagaaaaagaagaaagatcgggaggcggcggtcaagtttggtgccggtgggtcccagagtaccggtggcgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

574

Amino Acids

65.01

Weight (kDa)

9.21

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1267
Acc36I ACCTGC 2 cut(s) 193, 1267
Acc65I GGTACC 3 cut(s) 374, 805, 1611
AccB1I GGYRCC 7 cut(s) 159, 374, 805, 888, 894, 1611, 1688
AccBSI CCGCTC 1 cut(s) 1321
AccI GTMKAC 2 cut(s) 645, 923
AccII CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
AclWI GGATC 2 cut(s) 873, 1491
AcoI YGGCCR 3 cut(s) 81, 928, 1605
AcsI RAATTY 1 cut(s) 1628
AcuI CTGAAG 3 cut(s) 47, 1133, 1268
AcyI GRCGYC 2 cut(s) 627, 1224
AfaI GTAC 8 cut(s) 212, 238, 376, 807, 1214, 1523, 1613, 1708
AfeI AGCGCT 1 cut(s) 1414
AgeI ACCGGT 2 cut(s) 371, 1709
AgsI TTSAA 3 cut(s) 680, 1207, 1591
AhdI GACNNNNNGTC 1 cut(s) 652
AjnI CCWGG 2 cut(s) 396, 1614
AleI CACNNNNGTG 1 cut(s) 900
Alw21I GWGCWC 2 cut(s) 476, 1542
Alw26I GTCTC 4 cut(s) 677, 1017, 1178, 1390
AlwI GGATC 2 cut(s) 873, 1491
AlwNI CAGNNNCTG 3 cut(s) 172, 208, 1445
Ama87I CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
Aor51HI AGCGCT 1 cut(s) 1414
AoxI GGCC 8 cut(s) 59, 81, 613, 810, 928, 1140, 1302, 1605
ApeKI GCWGC 7 cut(s) 151, 364, 754, 1051, 1357, 1436, 1559
ApoI RAATTY 1 cut(s) 1628
AsiGI ACCGGT 2 cut(s) 371, 1709
Asp700I GAANNNNTTC 1 cut(s) 125
Asp718I GGTACC 3 cut(s) 374, 805, 1611
AspA2I CCTAGG 1 cut(s) 649
AspLEI GCGC 2 cut(s) 1396, 1415
AspS9I GGNCC 8 cut(s) 205, 394, 613, 811, 980, 1095, 1140, 1698
AsuHPI GGTGA 9 cut(s) 186, 691, 878, 928, 965, 1147, 1291, 1391, 1417
AvaI CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
AvaII GGWCC 5 cut(s) 205, 394, 980, 1095, 1698
AvrII CCTAGG 1 cut(s) 649
BaeGI GKGCMC 1 cut(s) 1201
BanI GGYRCC 7 cut(s) 159, 374, 805, 888, 894, 1611, 1688
BanII GRGCYC 2 cut(s) 476, 1542
BarI GAAGNNNNNNTAC 4 cut(s) 672, 704, 1457, 1489
BauI CACGAG 1 cut(s) 1505
BbsI GAAGAC 2 cut(s) 630, 1634
Bbv12I GWGCWC 2 cut(s) 476, 1542
BbvI GCAGC 7 cut(s) 138, 376, 766, 1063, 1369, 1423, 1546
BccI CCATC 8 cut(s) 65, 73, 516, 592, 604, 1303, 1327, 1336
BceAI ACGGC 2 cut(s) 1155, 1433
BciT130I CCWGG 2 cut(s) 398, 1616
BclI TGATCA 1 cut(s) 589
BcoDI GTCTC 4 cut(s) 677, 1017, 1178, 1390
BfaI CTAG 5 cut(s) 255, 326, 512, 518, 650
BfmI CTRYAG 2 cut(s) 164, 1437
BfoI RGCGCY 1 cut(s) 1416
BfuAI ACCTGC 2 cut(s) 193, 1267
BlnI CCTAGG 1 cut(s) 649
BlpI GCTNAGC 1 cut(s) 1353
Bme18I GGWCC 5 cut(s) 205, 394, 980, 1095, 1698
BmeRI GACNNNNNGTC 1 cut(s) 652
BmeT110I CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
BmgT120I GGNCC 8 cut(s) 205, 394, 613, 811, 980, 1095, 1140, 1698
BmrI ACTGGG 1 cut(s) 849
BmsI GCATC 3 cut(s) 171, 694, 1182
BmuI ACTGGG 1 cut(s) 849
BoxI GACNNNNGTC 2 cut(s) 746, 985
BpiI GAAGAC 2 cut(s) 630, 1634
BplI GAGNNNNNCTC 4 cut(s) 458, 490, 1310, 1342
BpmI CTGGAG 2 cut(s) 713, 1667
Bpu10I CCTNAGC 1 cut(s) 56
Bpu1102I GCTNAGC 1 cut(s) 1353
BpuEI CTTGAG 3 cut(s) 199, 1394, 1548
Bsa29I ATCGAT 1 cut(s) 639
BsaBI GATNNNNATC 2 cut(s) 588, 1242
BsaHI GRCGYC 2 cut(s) 627, 1224
BsaI GGTCTC 1 cut(s) 677
BsaWI WCCGGW 3 cut(s) 40, 371, 1709
BsaXI ACNNNNNCTCC 6 cut(s) 905, 935, 1511, 1514, 1541, 1544
Bse118I RCCGGY 6 cut(s) 371, 808, 891, 926, 1691, 1709
Bse1I ACTGG 2 cut(s) 696, 844
Bse3DI GCAATG 1 cut(s) 854
Bse8I GATNNNNATC 2 cut(s) 588, 1242
BseBI CCWGG 2 cut(s) 398, 1616
BseCI ATCGAT 1 cut(s) 639
BseGI GGATG 7 cut(s) 76, 186, 486, 527, 589, 940, 1624
BseJI GATNNNNATC 2 cut(s) 588, 1242
BseMI GCAATG 1 cut(s) 854
BseMII CTCAG 4 cut(s) 79, 975, 1380, 1416
BseNI ACTGG 2 cut(s) 696, 844
BseRI GAGGAG 3 cut(s) 484, 1268, 1532
BseSI GKGCMC 1 cut(s) 1201
BseX3I CGGCCG 1 cut(s) 928
BseXI GCAGC 7 cut(s) 138, 376, 766, 1063, 1369, 1423, 1546
BseYI CCCAGC 1 cut(s) 329
BsgI GTGCAG 1 cut(s) 773
Bsh1236I CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
Bsh1285I CGRYCG 2 cut(s) 931, 1132
BshFI GGCC 8 cut(s) 61, 83, 615, 812, 930, 1142, 1304, 1607
BshNI GGYRCC 7 cut(s) 159, 374, 805, 888, 894, 1611, 1688
BshTI ACCGGT 2 cut(s) 371, 1709
BshVI ATCGAT 1 cut(s) 639
BsiEI CGRYCG 2 cut(s) 931, 1132
BsiHKAI GWGCWC 2 cut(s) 476, 1542
BsiHKCI CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
BslFI GGGAC 6 cut(s) 407, 808, 993, 1337, 1433, 1684
BsmAI GTCTC 4 cut(s) 677, 1017, 1178, 1390
BsmBI CGTCTC 1 cut(s) 1178
BsmFI GGGAC 6 cut(s) 407, 808, 993, 1337, 1433, 1684
BsmI GAATGC 1 cut(s) 493
BsnI GGCC 8 cut(s) 61, 83, 615, 812, 930, 1142, 1304, 1607
Bso31I GGTCTC 1 cut(s) 677
BsoBI CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
Bsp1286I GDGCHC 3 cut(s) 476, 1201, 1542
Bsp143I GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
Bsp1720I GCTNAGC 1 cut(s) 1353
BspANI GGCC 8 cut(s) 61, 83, 615, 812, 930, 1142, 1304, 1607
BspCNI CTCAG 4 cut(s) 78, 976, 1381, 1417
BspDI ATCGAT 1 cut(s) 639
BspFNI CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
BspHI TCATGA 1 cut(s) 1581
BspMAI CTGCAG 1 cut(s) 1441
BspMI ACCTGC 2 cut(s) 193, 1267
BspPI GGATC 2 cut(s) 873, 1491
BspT107I GGYRCC 7 cut(s) 159, 374, 805, 888, 894, 1611, 1688
BspTNI GGTCTC 1 cut(s) 677
BsrBI CCGCTC 1 cut(s) 1321
BsrDI GCAATG 1 cut(s) 854
BsrFI RCCGGY 6 cut(s) 371, 808, 891, 926, 1691, 1709
BsrI ACTGG 2 cut(s) 696, 844
BssAI RCCGGY 6 cut(s) 371, 808, 891, 926, 1691, 1709
BssMI GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
BssNAI GTATAC 1 cut(s) 924
BssNI GRCGYC 2 cut(s) 627, 1224
BssSI CACGAG 1 cut(s) 1505
BssT1I CCWWGG 3 cut(s) 133, 649, 1143
Bst1107I GTATAC 1 cut(s) 924
Bst2BI CACGAG 1 cut(s) 1505
Bst2UI CCWGG 2 cut(s) 398, 1616
Bst4CI ACNGT 2 cut(s) 168, 241
Bst6I CTCTTC 6 cut(s) 422, 539, 675, 950, 1208, 1395
BstACI GRCGYC 2 cut(s) 627, 1224
BstAPI GCANNNNNTGC 1 cut(s) 1445
BstC8I GCNNGC 3 cut(s) 1197, 1228, 1718
BstDEI CTNAG 9 cut(s) 56, 65, 984, 1103, 1338, 1353, 1389, 1425, 1477
BstDSI CCRYGG 1 cut(s) 1494
BstF5I GGATG 7 cut(s) 76, 186, 486, 527, 589, 940, 1624
BstFNI CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
BstH2I RGCGCY 1 cut(s) 1416
BstHHI GCGC 2 cut(s) 1396, 1415
BstKTI GATC 7 cut(s) 12, 592, 699, 727, 881, 1486, 1666
BstMAI GTCTC 4 cut(s) 677, 1017, 1178, 1390
BstMBI GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
BstMCI CGRYCG 2 cut(s) 931, 1132
BstMWI GCNNNNNNNGC 7 cut(s) 92, 151, 523, 1048, 1099, 1223, 1445
BstNI CCWGG 2 cut(s) 398, 1616
BstNSI RCATGY 1 cut(s) 286
BstPAI GACNNNNGTC 2 cut(s) 746, 985
BstSFI CTRYAG 2 cut(s) 164, 1437
BstSLI GKGCMC 1 cut(s) 1201
BstUI CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
BstV1I GCAGC 7 cut(s) 138, 376, 766, 1063, 1369, 1423, 1546
BstV2I GAAGAC 2 cut(s) 630, 1634
BstX2I RGATCY 1 cut(s) 878
BstYI RGATCY 1 cut(s) 878
BstZ17I GTATAC 1 cut(s) 924
BstZI CGGCCG 1 cut(s) 928
Bsu15I ATCGAT 1 cut(s) 639
BsuRI GGCC 8 cut(s) 61, 83, 615, 812, 930, 1142, 1304, 1607
BsuTUI ATCGAT 1 cut(s) 639
BtgI CCRYGG 1 cut(s) 1494
BtgZI GCGATG 1 cut(s) 861
BtsCI GGATG 7 cut(s) 76, 186, 486, 527, 589, 940, 1624
BtsIMutI CAGTG 1 cut(s) 837
BveI ACCTGC 2 cut(s) 193, 1267
Cac8I GCNNGC 3 cut(s) 1197, 1228, 1718
CaiI CAGNNNCTG 3 cut(s) 172, 208, 1445
CciI TCATGA 1 cut(s) 1581
CfoI GCGC 2 cut(s) 1396, 1415
Cfr10I RCCGGY 6 cut(s) 371, 808, 891, 926, 1691, 1709
Cfr13I GGNCC 8 cut(s) 205, 394, 613, 811, 980, 1095, 1140, 1698
Cfr9I CCCGGG 4 cut(s) 97, 438, 976, 1179
ClaI ATCGAT 1 cut(s) 639
CseI GACGC 5 cut(s) 53, 635, 740, 1232, 1355
Csp6I GTAC 8 cut(s) 211, 237, 375, 806, 1213, 1522, 1612, 1707
CspAI ACCGGT 2 cut(s) 371, 1709
CviAII CATG 7 cut(s) 19, 283, 1099, 1189, 1292, 1455, 1582
CviQI GTAC 8 cut(s) 211, 237, 375, 806, 1213, 1522, 1612, 1707
DdeI CTNAG 9 cut(s) 56, 65, 984, 1103, 1338, 1353, 1389, 1425, 1477
DpnI GATC 7 cut(s) 11, 591, 698, 726, 880, 1485, 1665
DpnII GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
DriI GACNNNNNGTC 1 cut(s) 652
EaeI YGGCCR 3 cut(s) 81, 928, 1605
EagI CGGCCG 1 cut(s) 928
Eam1104I CTCTTC 6 cut(s) 422, 539, 675, 950, 1208, 1395
Eam1105I GACNNNNNGTC 1 cut(s) 652
EarI CTCTTC 6 cut(s) 422, 539, 675, 950, 1208, 1395
Ecl136II GAGCTC 2 cut(s) 474, 1540
EclXI CGGCCG 1 cut(s) 928
Eco130I CCWWGG 3 cut(s) 133, 649, 1143
Eco147I AGGCCT 1 cut(s) 61
Eco24I GRGCYC 2 cut(s) 476, 1542
Eco31I GGTCTC 1 cut(s) 677
Eco32I GATATC 1 cut(s) 790
Eco47I GGWCC 5 cut(s) 205, 394, 980, 1095, 1698
Eco47III AGCGCT 1 cut(s) 1414
Eco52I CGGCCG 1 cut(s) 928
Eco53kI GAGCTC 2 cut(s) 474, 1540
Eco57I CTGAAG 3 cut(s) 47, 1133, 1268
Eco88I CYCGRG 5 cut(s) 97, 438, 976, 1179, 1416
EcoICRI GAGCTC 2 cut(s) 474, 1540
EcoO109I RGGNCCY 3 cut(s) 205, 980, 1698
EcoRII CCWGG 2 cut(s) 396, 1614
EcoRV GATATC 1 cut(s) 790
EcoT14I CCWWGG 3 cut(s) 133, 649, 1143
EcoT38I GRGCYC 2 cut(s) 476, 1542
ErhI CCWWGG 3 cut(s) 133, 649, 1143
Esp3I CGTCTC 1 cut(s) 1178
FaeI CATG 7 cut(s) 22, 286, 1102, 1192, 1295, 1458, 1585
FalI AAGNNNNNCTT 2 cut(s) 615, 647
FaqI GGGAC 6 cut(s) 407, 808, 993, 1337, 1433, 1684
FatI CATG 7 cut(s) 18, 282, 1098, 1188, 1291, 1454, 1581
FauI CCCGC 4 cut(s) 226, 700, 1188, 1314
FbaI TGATCA 1 cut(s) 589
FblI GTMKAC 2 cut(s) 645, 923
FokI GGATG 7 cut(s) 83, 193, 473, 534, 596, 947, 1631
FriOI GRGCYC 2 cut(s) 476, 1542
FspBI CTAG 5 cut(s) 255, 326, 512, 518, 650
GlaI GCGC 2 cut(s) 1395, 1414
GsaI CCCAGC 1 cut(s) 333
GsuI CTGGAG 2 cut(s) 713, 1667
HaeII RGCGCY 1 cut(s) 1416
HaeIII GGCC 8 cut(s) 61, 83, 615, 812, 930, 1142, 1304, 1607
HgaI GACGC 5 cut(s) 53, 635, 740, 1232, 1355
HhaI GCGC 2 cut(s) 1396, 1415
Hin1I GRCGYC 2 cut(s) 627, 1224
Hin1II CATG 7 cut(s) 22, 286, 1102, 1192, 1295, 1458, 1585
Hin6I GCGC 2 cut(s) 1394, 1413
HinP1I GCGC 2 cut(s) 1394, 1413
HincII GTYRAC 1 cut(s) 646
HindII GTYRAC 1 cut(s) 646
HphI GGTGA 9 cut(s) 186, 691, 878, 928, 965, 1147, 1291, 1391, 1417
Hpy166II GTNNAC 3 cut(s) 646, 924, 1213
Hpy188I TCNGA 6 cut(s) 415, 460, 1248, 1390, 1426, 1634
Hpy188III TCNNGA 8 cut(s) 728, 778, 793, 1418, 1565, 1582, 1646, 1667
Hpy8I GTNNAC 3 cut(s) 646, 924, 1213
Hpy99I CGWCG 1 cut(s) 994
HpyCH4III ACNGT 2 cut(s) 168, 241
HpyCH4IV ACGT 1 cut(s) 920
HpyCH4V TGCA 3 cut(s) 754, 1291, 1439
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 151, 523, 1048, 1099, 1223, 1445
HpyF3I CTNAG 9 cut(s) 56, 65, 984, 1103, 1338, 1353, 1389, 1425, 1477
HpySE526I ACGT 1 cut(s) 920
Hsp92I GRCGYC 2 cut(s) 627, 1224
Hsp92II CATG 7 cut(s) 22, 286, 1102, 1192, 1295, 1458, 1585
HspAI GCGC 2 cut(s) 1394, 1413
KflI GGGWCCC 1 cut(s) 1698
KpnI GGTACC 3 cut(s) 378, 809, 1615
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
LmnI GCTCC 7 cut(s) 52, 471, 531, 739, 843, 1318, 1369
Lsp1109I GCAGC 7 cut(s) 138, 376, 766, 1063, 1369, 1423, 1546
LweI GCATC 3 cut(s) 171, 694, 1182
MaeI CTAG 5 cut(s) 255, 326, 512, 518, 650
MaeII ACGT 1 cut(s) 920
MaeIII GTNAC 6 cut(s) 192, 241, 274, 739, 916, 1106
MalI GATC 7 cut(s) 11, 591, 698, 726, 880, 1485, 1665
MbiI CCGCTC 1 cut(s) 1321
MboI GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
MflI RGATCY 1 cut(s) 878
MhlI GDGCHC 3 cut(s) 476, 1201, 1542
MluCI AATT 2 cut(s) 345, 1628
MlyI GAGTC 4 cut(s) 995, 1319, 1415, 1451
MroXI GAANNNNTTC 1 cut(s) 125
MseI TTAA 1 cut(s) 348
MslI CAYNNNNRTG 4 cut(s) 17, 639, 900, 1547
MspA1I CMGCKG 3 cut(s) 151, 367, 1054
Mva1269I GAATGC 1 cut(s) 493
MvaI CCWGG 2 cut(s) 398, 1616
MvnI CGCG 5 cut(s) 47, 86, 1217, 1349, 1396
MwoI GCNNNNNNNGC 7 cut(s) 92, 151, 523, 1048, 1099, 1223, 1445
NdeII GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
NlaIII CATG 7 cut(s) 22, 286, 1102, 1192, 1295, 1458, 1585
NmuCI GTSAC 4 cut(s) 192, 739, 916, 1106
NspI RCATGY 1 cut(s) 286
OliI CACNNNNGTG 1 cut(s) 900
PagI TCATGA 1 cut(s) 1581
PaqCI CACCTGC 1 cut(s) 1267
PceI AGGCCT 1 cut(s) 61
PctI GAATGC 1 cut(s) 493
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 7 cut(s) 88, 121, 483, 945, 1165, 1184, 1362
PflFI GACNNNGTC 1 cut(s) 1638
PinAI ACCGGT 2 cut(s) 371, 1709
PleI GAGTC 4 cut(s) 994, 1319, 1415, 1450
PpsI GAGTC 4 cut(s) 994, 1319, 1415, 1450
PpuMI RGGWCCY 3 cut(s) 205, 980, 1698
PshAI GACNNNNGTC 2 cut(s) 746, 985
Psp124BI GAGCTC 2 cut(s) 476, 1542
Psp5II RGGWCCY 3 cut(s) 205, 980, 1698
Psp6I CCWGG 2 cut(s) 396, 1614
PspFI CCCAGC 1 cut(s) 329
PspGI CCWGG 2 cut(s) 396, 1614
PspPI GGNCC 8 cut(s) 205, 394, 613, 811, 980, 1095, 1140, 1698
PspPPI RGGWCCY 3 cut(s) 205, 980, 1698
PstI CTGCAG 1 cut(s) 1441
PstNI CAGNNNCTG 3 cut(s) 172, 208, 1445
PsuI RGATCY 1 cut(s) 878
PsyI GACNNNGTC 1 cut(s) 1638
PvuII CAGCTG 2 cut(s) 367, 1054
RsaI GTAC 8 cut(s) 212, 238, 376, 807, 1214, 1523, 1613, 1708
RsaNI GTAC 8 cut(s) 211, 237, 375, 806, 1213, 1522, 1612, 1707
RseI CAYNNNNRTG 4 cut(s) 17, 639, 900, 1547
SacI GAGCTC 2 cut(s) 476, 1542
SalI GTCGAC 1 cut(s) 644
SaqAI TTAA 1 cut(s) 348
Sau3AI GATC 7 cut(s) 9, 589, 696, 724, 878, 1483, 1663
Sau96I GGNCC 8 cut(s) 205, 394, 613, 811, 980, 1095, 1140, 1698
SchI GAGTC 4 cut(s) 995, 1319, 1415, 1451
SduI GDGCHC 3 cut(s) 476, 1201, 1542
SfaNI GCATC 3 cut(s) 171, 694, 1182
SfcI CTRYAG 2 cut(s) 164, 1437
SinI GGWCC 5 cut(s) 205, 394, 980, 1095, 1698
SmaI CCCGGG 4 cut(s) 99, 440, 978, 1181
SmiMI CAYNNNNRTG 4 cut(s) 17, 639, 900, 1547
SmlI CTYRAG 3 cut(s) 214, 1373, 1563
SmoI CTYRAG 3 cut(s) 214, 1373, 1563
Sse9I AATT 2 cut(s) 345, 1628
SseBI AGGCCT 1 cut(s) 61
SspMI CTAG 5 cut(s) 255, 326, 512, 518, 650
SstI GAGCTC 2 cut(s) 476, 1542
StuI AGGCCT 1 cut(s) 61
StyI CCWWGG 3 cut(s) 133, 649, 1143
TaaI ACNGT 2 cut(s) 168, 241
TaiI ACGT 1 cut(s) 923
TaqI TCGA 5 cut(s) 293, 639, 645, 656, 1128
TasI AATT 2 cut(s) 345, 1628
TatI WGTACW 2 cut(s) 210, 1521
TauI GCSGC 4 cut(s) 86, 254, 1352, 1676
TfiI GAWTC 7 cut(s) 88, 121, 483, 945, 1165, 1184, 1362
Tru1I TTAA 1 cut(s) 348
Tru9I TTAA 1 cut(s) 348
TscAI CASTG 1 cut(s) 844
TseFI GTSAC 4 cut(s) 192, 739, 916, 1106
TseI GCWGC 7 cut(s) 151, 364, 754, 1051, 1357, 1436, 1559
Tsp45I GTSAC 4 cut(s) 192, 739, 916, 1106
TspDTI ATGAA 5 cut(s) 17, 475, 1095, 1598, 1635
TspMI CCCGGG 4 cut(s) 97, 438, 976, 1179
TspRI CASTG 1 cut(s) 844
Tth111I GACNNNGTC 1 cut(s) 1638
VpaK11BI GGWCC 5 cut(s) 205, 394, 980, 1095, 1698
XapI RAATTY 1 cut(s) 1628
XceI RCATGY 1 cut(s) 286
XcmI CCANNNNNNNNNTGG 1 cut(s) 1709
XmaI CCCGGG 4 cut(s) 97, 438, 976, 1179
XmaJI CCTAGG 1 cut(s) 649
XmiI GTMKAC 2 cut(s) 645, 923
XmnI GAANNNNTTC 1 cut(s) 125
XspI CTAG 5 cut(s) 255, 326, 512, 518, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.