Rmu_sc0004903.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004903.1
OG0000087
Physical Location & Seq
Reverse (-)
11334 .. 13182
1849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004903.1_g000006.1.cds

Sequence Viewer

Length: 1671 bp
atgacgatgaaggagatcgtagacatgcggctgaggtgggggataccggacgcggtagagcttaggccacttagggatggggagatggctgcgaatcctgccccggggtgggtggcgctgcacaagaatcagctccaccaagggttatcgctacccctaccccggtgtctacagtatctgctgcggatgctgaacctgtcaccggggcagctgactccgaatgccgttcgccaaatatacagtatgatggctatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcgatacaccgggtgatgtactcaaggaagcagtcttgtgcgggtacggtgacctttgccactagggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaataagaagtggcagctgatcggtccctttcaagccatcggggatcagtcctatacgctatccgaagtggaaaagaagaggatagcccgggtatatgccgtgtggtcggagaaagagagcagctcttatagattcatccggcactctatactctttaggctaggattagggtggctccctgagataactgatgagggatacggtgaacctgatcccgacgctcctgtggcccaccccgtgcagccctccatggccgatgtcattacgatagatgacaccggaatgggaaaagtaccggcctctgtgcctatctcttctcgttcaactgggagcgatgaggcgctactccccggtgagaagaagagatcccacaagcaccggcgtcgaactgataaggaggtgacgtacactggccgggatgtccagggtgccggtgcgaagaggcaaaagaaagatcacccgggatcagggccgtcaccttcccttggcctgttatctcccgccgttcctgtaatccctaagaagcccatcaagcagctgctgaacgaatacggggtcgccgatgaaaagttcgtgaggtccatgcttggggatctgaaggatatcgacctcgaccgggttcgagccaaagataatactccccaggagaatcgccgtctcgcccgggaatcgatgatgcgggcactctttaatgtgtacgccatcgacgccagcgaggaggatactcacctgaaggaggaggttagcaatctttccgggcaggggaagtaccttcatggcgagaaggccaagctggagaaggagcgggactcgttgaaggctgagatggccgcctctaagcagcggattgctgagcttgagggcgaggttgctgaggcgagagaggaggtgaagaatgcccgggacttcgagaagaaggctgcagagtctgccgtctcatggaaggagaaagcagactctctggaggatcgcctacccgcggagaggcacgaggccgtggaggagtacaagtcctcagatgagcttatctccatgctggctgctgcccaagataaggctgtcatcatgaagtttaagaagtgggtggcggccgggtatctagatgaggccaaattcaggcggggtctcctagagaaaaagaaaaaagagcgggaggcggcgggcaagtctggtgccggcgggtctcagagtaccgatggggatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

556

Amino Acids

62.54

Weight (kDa)

9.18

Isoelectric Point (pI)

48.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 887, 1631
AccBSI CCGCTC 2 cut(s) 1264, 1609
AccI GTMKAC 2 cut(s) 21, 169
AccII CGCG 4 cut(s) 53, 300, 302, 1439
AclWI GGATC 7 cut(s) 510, 665, 819, 931, 1059, 1434, 1668
AcoI YGGCCR 4 cut(s) 711, 871, 1287, 1548
AcsI RAATTY 1 cut(s) 1571
AcuI CTGAAG 2 cut(s) 1076, 1211
AcyI GRCGYC 2 cut(s) 841, 1167
AdeI CACNNNGTG 2 cut(s) 313, 697
AfaI GTAC 8 cut(s) 320, 346, 753, 866, 1157, 1229, 1466, 1651
AgsI TTSAA 3 cut(s) 491, 783, 1276
AjnI CCWGG 2 cut(s) 882, 1101
Alw26I GTCTC 4 cut(s) 1121, 1399, 1589, 1647
AlwI GGATC 7 cut(s) 510, 665, 819, 931, 1059, 1434, 1668
AlwNI CAGNNNCTG 3 cut(s) 178, 1000, 1388
Ama87I CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
ApoI RAATTY 1 cut(s) 1571
ArsI GACNNNNNNTTYG 2 cut(s) 999, 1031
AspLEI GCGC 3 cut(s) 118, 302, 802
AspS9I GGNCC 5 cut(s) 259, 482, 688, 929, 1038
AvaI CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
AvaII GGWCC 3 cut(s) 259, 482, 1038
BaeGI GKGCMC 1 cut(s) 1144
BanI GGYRCC 2 cut(s) 887, 1631
BauI CACGAG 1 cut(s) 1448
BbvCI CCTCAGC 2 cut(s) 32, 1332
BccI CCATC 8 cut(s) 71, 79, 241, 503, 995, 1169, 1279, 1649
BceAI ACGGC 7 cut(s) 209, 542, 916, 947, 1098, 1376, 1439
BcgI CGANNNNNNTGC 2 cut(s) 824, 858
BciT130I CCWGG 2 cut(s) 884, 1103
BciVI GTATCC 3 cut(s) 36, 650, 1174
BcoDI GTCTC 4 cut(s) 1121, 1399, 1589, 1647
BfaI CTAG 6 cut(s) 363, 380, 434, 620, 1559, 1589
BfmI CTRYAG 2 cut(s) 170, 1380
BfoI RGCGCY 2 cut(s) 119, 803
BfuI GTATCC 3 cut(s) 36, 650, 1174
BlpI GCTNAGC 1 cut(s) 1311
Bme18I GGWCC 3 cut(s) 259, 482, 1038
BmeT110I CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
BmgT120I GGNCC 5 cut(s) 259, 482, 688, 929, 1038
BmiI GGNNCC 5 cut(s) 260, 484, 635, 889, 1633
BmrI ACTGGG 1 cut(s) 795
BmsI GCATC 2 cut(s) 177, 1125
BmuI ACTGGG 1 cut(s) 795
BplI GAGNNNNNCTC 6 cut(s) 566, 598, 1253, 1285, 1472, 1504
BpmI CTGGAG 2 cut(s) 1274, 1442
Bpu10I CCTNAGC 3 cut(s) 32, 62, 1332
Bpu1102I GCTNAGC 1 cut(s) 1311
BpuEI CTTGAG 2 cut(s) 307, 1337
Bsa29I ATCGAT 1 cut(s) 1130
BsaBI GATNNNNATC 1 cut(s) 1659
BsaHI GRCGYC 2 cut(s) 841, 1167
BsaI GGTCTC 2 cut(s) 1589, 1647
BsaWI WCCGGW 2 cut(s) 46, 737
BsaXI ACNNNNNCTCC 4 cut(s) 848, 878, 1454, 1484
Bse118I RCCGGY 4 cut(s) 754, 837, 890, 1634
Bse1I ACTGG 2 cut(s) 790, 874
Bse8I GATNNNNATC 1 cut(s) 1659
BseBI CCWGG 2 cut(s) 884, 1103
BseCI ATCGAT 1 cut(s) 1130
BseGI GGATG 4 cut(s) 82, 192, 594, 883
BseJI GATNNNNATC 1 cut(s) 1659
BseMII CTCAG 7 cut(s) 23, 630, 1272, 1302, 1323, 1488, 1658
BseNI ACTGG 2 cut(s) 790, 874
BseRI GAGGAG 4 cut(s) 1190, 1211, 1358, 1475
BseSI GKGCMC 1 cut(s) 1144
BseX3I CGGCCG 1 cut(s) 1548
BsgI GTGCAG 2 cut(s) 104, 719
Bsh1236I CGCG 4 cut(s) 53, 300, 302, 1439
Bsh1285I CGRYCG 2 cut(s) 1075, 1551
BshNI GGYRCC 2 cut(s) 887, 1631
BshVI ATCGAT 1 cut(s) 1130
BsiEI CGRYCG 2 cut(s) 1075, 1551
BsiHKCI CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
BslFI GGGAC 4 cut(s) 272, 468, 1280, 1376
BsmAI GTCTC 4 cut(s) 1121, 1399, 1589, 1647
BsmBI CGTCTC 2 cut(s) 1121, 1399
BsmFI GGGAC 4 cut(s) 272, 468, 1280, 1376
BsmI GAATGC 2 cut(s) 226, 1360
Bso31I GGTCTC 2 cut(s) 1589, 1647
BsoBI CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
Bsp1286I GDGCHC 1 cut(s) 1144
Bsp1720I GCTNAGC 1 cut(s) 1311
Bsp19I CCATGG 1 cut(s) 708
BspCNI CTCAG 7 cut(s) 24, 631, 1273, 1303, 1324, 1487, 1657
BspDI ATCGAT 1 cut(s) 1130
BspFNI CGCG 4 cut(s) 53, 300, 302, 1439
BspHI TCATGA 1 cut(s) 1524
BspLI GGNNCC 5 cut(s) 260, 484, 635, 889, 1633
BspMAI CTGCAG 1 cut(s) 1384
BspPI GGATC 7 cut(s) 510, 665, 819, 931, 1059, 1434, 1668
BspT107I GGYRCC 2 cut(s) 887, 1631
BspTNI GGTCTC 2 cut(s) 1589, 1647
BsrBI CCGCTC 2 cut(s) 1264, 1609
BsrFI RCCGGY 4 cut(s) 754, 837, 890, 1634
BsrI ACTGG 2 cut(s) 790, 874
BssAI RCCGGY 4 cut(s) 754, 837, 890, 1634
BssNI GRCGYC 2 cut(s) 841, 1167
BssSI CACGAG 1 cut(s) 1448
BssT1I CCWWGG 3 cut(s) 139, 708, 943
Bst2BI CACGAG 1 cut(s) 1448
Bst2UI CCWGG 2 cut(s) 884, 1103
Bst4CI ACNGT 4 cut(s) 174, 242, 349, 662
Bst6I CTCTTC 4 cut(s) 530, 778, 815, 893
BstACI GRCGYC 2 cut(s) 841, 1167
BstAPI GCANNNNNTGC 1 cut(s) 1388
BstC8I GCNNGC 6 cut(s) 269, 1140, 1171, 1497, 1621, 1636
BstDSI CCRYGG 3 cut(s) 708, 1437, 1455
BstEII GGTNACC 1 cut(s) 349
BstENI CCTNNNNNAGG 1 cut(s) 1193
BstF5I GGATG 4 cut(s) 82, 192, 594, 883
BstFNI CGCG 4 cut(s) 53, 300, 302, 1439
BstH2I RGCGCY 2 cut(s) 119, 803
BstHHI GCGC 3 cut(s) 118, 302, 802
BstMAI GTCTC 4 cut(s) 1121, 1399, 1589, 1647
BstMCI CGRYCG 2 cut(s) 1075, 1551
BstMWI GCNNNNNNNGC 8 cut(s) 98, 187, 277, 686, 991, 1166, 1286, 1388
BstNI CCWGG 2 cut(s) 884, 1103
BstNSI RCATGY 1 cut(s) 28
BstPI GGTNACC 1 cut(s) 349
BstSFI CTRYAG 2 cut(s) 170, 1380
BstSLI GKGCMC 1 cut(s) 1144
BstUI CGCG 4 cut(s) 53, 300, 302, 1439
BstX2I RGATCY 2 cut(s) 824, 1051
BstYI RGATCY 2 cut(s) 824, 1051
BstZI CGGCCG 1 cut(s) 1548
Bsu15I ATCGAT 1 cut(s) 1130
BsuI GTATCC 3 cut(s) 36, 650, 1174
BsuTUI ATCGAT 1 cut(s) 1130
BtgI CCRYGG 3 cut(s) 708, 1437, 1455
BtgZI GCGATG 1 cut(s) 807
BtsCI GGATG 4 cut(s) 82, 192, 594, 883
BtsIMutI CAGTG 1 cut(s) 867
Cac8I GCNNGC 6 cut(s) 269, 1140, 1171, 1497, 1621, 1636
CaiI CAGNNNCTG 3 cut(s) 178, 1000, 1388
CciI TCATGA 1 cut(s) 1524
CfoI GCGC 3 cut(s) 118, 302, 802
Cfr10I RCCGGY 4 cut(s) 754, 837, 890, 1634
Cfr13I GGNCC 5 cut(s) 259, 482, 688, 929, 1038
Cfr42I CCGCGG 1 cut(s) 1440
Cfr9I CCCGGG 5 cut(s) 103, 546, 919, 1122, 1359
ClaI ATCGAT 1 cut(s) 1130
CseI GACGC 4 cut(s) 59, 686, 830, 1175
Csp6I GTAC 8 cut(s) 319, 345, 752, 865, 1156, 1228, 1465, 1650
CviAII CATG 7 cut(s) 25, 709, 1042, 1235, 1398, 1492, 1525
CviQI GTAC 8 cut(s) 319, 345, 752, 865, 1156, 1228, 1465, 1650
DraIII CACNNNGTG 2 cut(s) 313, 697
EaeI YGGCCR 4 cut(s) 711, 871, 1287, 1548
EagI CGGCCG 1 cut(s) 1548
Eam1104I CTCTTC 4 cut(s) 530, 778, 815, 893
EarI CTCTTC 4 cut(s) 530, 778, 815, 893
EclXI CGGCCG 1 cut(s) 1548
Eco130I CCWWGG 3 cut(s) 139, 708, 943
Eco31I GGTCTC 2 cut(s) 1589, 1647
Eco32I GATATC 1 cut(s) 1063
Eco47I GGWCC 3 cut(s) 259, 482, 1038
Eco52I CGGCCG 1 cut(s) 1548
Eco57I CTGAAG 2 cut(s) 1076, 1211
Eco88I CYCGRG 5 cut(s) 103, 546, 919, 1122, 1359
Eco91I GGTNACC 1 cut(s) 349
EcoNI CCTNNNNNAGG 1 cut(s) 1193
EcoO109I RGGNCCY 1 cut(s) 259
EcoO65I GGTNACC 1 cut(s) 349
EcoRII CCWGG 2 cut(s) 882, 1101
EcoRV GATATC 1 cut(s) 1063
EcoT14I CCWWGG 3 cut(s) 139, 708, 943
ErhI CCWWGG 3 cut(s) 139, 708, 943
Esp3I CGTCTC 2 cut(s) 1121, 1399
FaeI CATG 7 cut(s) 28, 712, 1045, 1238, 1401, 1495, 1528
FaqI GGGAC 4 cut(s) 272, 468, 1280, 1376
FatI CATG 7 cut(s) 24, 708, 1041, 1234, 1397, 1491, 1524
FauI CCCGC 9 cut(s) 334, 967, 1131, 1257, 1444, 1572, 1602, 1612, 1631
FblI GTMKAC 2 cut(s) 21, 169
FokI GGATG 4 cut(s) 89, 199, 581, 890
FspBI CTAG 6 cut(s) 363, 380, 434, 620, 1559, 1589
GlaI GCGC 3 cut(s) 117, 301, 801
GsuI CTGGAG 2 cut(s) 1274, 1442
HaeII RGCGCY 2 cut(s) 119, 803
HgaI GACGC 4 cut(s) 59, 686, 830, 1175
HhaI GCGC 3 cut(s) 118, 302, 802
Hin1I GRCGYC 2 cut(s) 841, 1167
Hin1II CATG 7 cut(s) 28, 712, 1045, 1238, 1401, 1495, 1528
Hin6I GCGC 3 cut(s) 116, 300, 800
HinP1I GCGC 3 cut(s) 116, 300, 800
HinfI GANTC 9 cut(s) 94, 127, 214, 591, 1108, 1127, 1268, 1385, 1415
Hpy166II GTNNAC 5 cut(s) 22, 170, 665, 867, 1156
Hpy188I TCNGA 6 cut(s) 219, 523, 568, 1056, 1477, 1647
Hpy188III TCNNGA 6 cut(s) 674, 1033, 1369, 1421, 1525, 1559
Hpy8I GTNNAC 5 cut(s) 22, 170, 665, 867, 1156
Hpy99I CGWCG 3 cut(s) 680, 846, 1169
HpyCH4III ACNGT 4 cut(s) 174, 242, 349, 662
HpyCH4IV ACGT 1 cut(s) 863
HpyCH4V TGCA 3 cut(s) 121, 700, 1382
HpyF10VI GCNNNNNNNGC 8 cut(s) 98, 187, 277, 686, 991, 1166, 1286, 1388
HpySE526I ACGT 1 cut(s) 863
Hsp92I GRCGYC 2 cut(s) 841, 1167
Hsp92II CATG 7 cut(s) 28, 712, 1045, 1238, 1401, 1495, 1528
HspAI GCGC 3 cut(s) 116, 300, 800
KroI GCCGGC 1 cut(s) 1634
KroNI GCCGGC 1 cut(s) 1636
KspI CCGCGG 1 cut(s) 1440
LmnI GCTCC 5 cut(s) 138, 639, 685, 789, 1261
LweI GCATC 2 cut(s) 177, 1125
MaeI CTAG 6 cut(s) 363, 380, 434, 620, 1559, 1589
MaeII ACGT 1 cut(s) 863
MaeIII GTNAC 5 cut(s) 198, 349, 382, 859, 933
MbiI CCGCTC 2 cut(s) 1264, 1609
MboII GAAGA 7 cut(s) 547, 765, 829, 832, 910, 1363, 1384
MflI RGATCY 2 cut(s) 824, 1051
MhlI GDGCHC 1 cut(s) 1144
MluCI AATT 1 cut(s) 1571
MlyI GAGTC 4 cut(s) 208, 1262, 1394, 1409
MmeI TCCRAC 1 cut(s) 546
MroNI GCCGGC 1 cut(s) 1634
MseI TTAA 2 cut(s) 1149, 1533
MslI CAYNNNNRTG 1 cut(s) 740
MspA1I CMGCKG 5 cut(s) 211, 475, 997, 1303, 1439
Mva1269I GAATGC 2 cut(s) 226, 1360
MvaI CCWGG 2 cut(s) 884, 1103
MvnI CGCG 4 cut(s) 53, 300, 302, 1439
MwoI GCNNNNNNNGC 8 cut(s) 98, 187, 277, 686, 991, 1166, 1286, 1388
NaeI GCCGGC 1 cut(s) 1636
NcoI CCATGG 1 cut(s) 708
NgoMIV GCCGGC 1 cut(s) 1634
NlaIII CATG 7 cut(s) 28, 712, 1045, 1238, 1401, 1495, 1528
NlaIV GGNNCC 5 cut(s) 260, 484, 635, 889, 1633
NmuCI GTSAC 4 cut(s) 198, 349, 859, 933
NspI RCATGY 1 cut(s) 28
PagI TCATGA 1 cut(s) 1524
PcsI WCGNNNNNNNCGW 2 cut(s) 1017, 1170
PctI GAATGC 2 cut(s) 226, 1360
PdiI GCCGGC 1 cut(s) 1636
PfeI GAWTC 5 cut(s) 94, 127, 591, 1108, 1127
PleI GAGTC 4 cut(s) 208, 1262, 1393, 1409
PpsI GAGTC 4 cut(s) 208, 1262, 1393, 1409
PpuMI RGGWCCY 1 cut(s) 259
Psp5II RGGWCCY 1 cut(s) 259
Psp6I CCWGG 2 cut(s) 882, 1101
PspEI GGTNACC 1 cut(s) 349
PspGI CCWGG 2 cut(s) 882, 1101
PspN4I GGNNCC 5 cut(s) 260, 484, 635, 889, 1633
PspPI GGNCC 5 cut(s) 259, 482, 688, 929, 1038
PspPPI RGGWCCY 1 cut(s) 259
PstI CTGCAG 1 cut(s) 1384
PstNI CAGNNNCTG 3 cut(s) 178, 1000, 1388
PsuI RGATCY 2 cut(s) 824, 1051
PvuII CAGCTG 3 cut(s) 211, 475, 997
RsaI GTAC 8 cut(s) 320, 346, 753, 866, 1157, 1229, 1466, 1651
RsaNI GTAC 8 cut(s) 319, 345, 752, 865, 1156, 1228, 1465, 1650
RseI CAYNNNNRTG 1 cut(s) 740
SacII CCGCGG 1 cut(s) 1440
SaqAI TTAA 2 cut(s) 1149, 1533
Sau96I GGNCC 5 cut(s) 259, 482, 688, 929, 1038
SchI GAGTC 4 cut(s) 208, 1262, 1394, 1409
SduI GDGCHC 1 cut(s) 1144
SfaNI GCATC 2 cut(s) 177, 1125
SfcI CTRYAG 2 cut(s) 170, 1380
Sfr303I CCGCGG 1 cut(s) 1440
SgrAI CRCCGGYG 1 cut(s) 837
SgrBI CCGCGG 1 cut(s) 1440
SinI GGWCC 3 cut(s) 259, 482, 1038
SmaI CCCGGG 5 cut(s) 105, 548, 921, 1124, 1361
SmiMI CAYNNNNRTG 1 cut(s) 740
SmlI CTYRAG 2 cut(s) 322, 1316
SmoI CTYRAG 2 cut(s) 322, 1316
Sse9I AATT 1 cut(s) 1571
SspMI CTAG 6 cut(s) 363, 380, 434, 620, 1559, 1589
StyI CCWWGG 3 cut(s) 139, 708, 943
TaaI ACNGT 4 cut(s) 174, 242, 349, 662
TaiI ACGT 1 cut(s) 866
TaqI TCGA 8 cut(s) 401, 844, 1065, 1071, 1081, 1130, 1164, 1368
TaqII GACCGA 1 cut(s) 470
TasI AATT 1 cut(s) 1571
TatI WGTACW 2 cut(s) 318, 1464
TauI GCSGC 5 cut(s) 31, 379, 1292, 1550, 1619
TfiI GAWTC 5 cut(s) 94, 127, 591, 1108, 1127
Tru1I TTAA 2 cut(s) 1149, 1533
Tru9I TTAA 2 cut(s) 1149, 1533
TscAI CASTG 1 cut(s) 874
TseFI GTSAC 4 cut(s) 198, 349, 859, 933
Tsp45I GTSAC 4 cut(s) 198, 349, 859, 933
TspDTI ATGAA 5 cut(s) 23, 583, 1038, 1223, 1541
TspMI CCCGGG 5 cut(s) 103, 546, 919, 1122, 1359
TspRI CASTG 1 cut(s) 874
VpaK11BI GGWCC 3 cut(s) 259, 482, 1038
XagI CCTNNNNNAGG 1 cut(s) 1193
XapI RAATTY 1 cut(s) 1571
XbaI TCTAGA 1 cut(s) 1558
XceI RCATGY 1 cut(s) 28
XmaI CCCGGG 5 cut(s) 103, 546, 919, 1122, 1359
XmiI GTMKAC 2 cut(s) 21, 169
XspI CTAG 6 cut(s) 363, 380, 434, 620, 1559, 1589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.