Rmu_sc0001477.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001477.1
OG0000087
Physical Location & Seq
Forward (+)
511 .. 1505
995 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001477.1_g000001.1.cds

Sequence Viewer

Length: 930 bp
atgggaaaagtaccggccccagtgcctatttcctctctttccactgggagcgatgaggcattactccccggtgagaagaagagatcccacaggcaccggcatcgaactgatacggaggtgacgtacactggccgggatgtccaaggaactggtgcgaagaggcagaagaaagatcacccgggatcagagtcgttgtcttctcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacgggattgacgatgaaaagttcgtgcgatccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaggataacactccccaggagaatcgccgtctctcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcattctcttcgggcaggtgaagtatcttaatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgccactaagcagcggatcgcggagcttgagggtgaggttgctgaggcacggaaagagctaaagaacgcccgggactccaagaaaaaggctgcagagtctgccatctcatggaaggagaaggcagactacctggaggatcgccttcccgcggagaggcacgaggccgtggaggagtacaagtcctcagaagagctcatctctatgctagctgctgcccaagataaggctgtcattatgaagttcaaggagtgggtggcggccgggtacttagatgaagccaaattcaggcggggtctcctggagaaaaagaagaaggatcgggaggcggcggccaagtctggtgccggtgggtctcagaataccgggggggatcggttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

309

Amino Acids

34.53

Weight (kDa)

8.89

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 469
Acc36I ACCTGC 1 cut(s) 469
AccB1I GGYRCC 2 cut(s) 93, 890
AccB7I CCANNNNNTGG 1 cut(s) 657
AccBSI CCGCTC 1 cut(s) 523
AccII CGCG 2 cut(s) 569, 698
AclWI GGATC 8 cut(s) 78, 190, 291, 318, 572, 693, 873, 927
AcoI YGGCCR 4 cut(s) 130, 546, 807, 879
AcsI RAATTY 1 cut(s) 830
AcuI CTGAAG 2 cut(s) 335, 470
AcyI GRCGYC 1 cut(s) 426
AfaI GTAC 6 cut(s) 12, 125, 269, 416, 725, 815
AfiI CCNNNNNNNGG 8 cut(s) 306, 334, 340, 657, 697, 702, 772, 834
AgsI TTSAA 2 cut(s) 409, 793
AjnI CCWGG 3 cut(s) 360, 678, 846
AluBI AGCT 6 cut(s) 256, 511, 574, 607, 742, 758
AluI AGCT 6 cut(s) 256, 511, 574, 607, 742, 758
Alw21I GWGCWC 1 cut(s) 744
Alw26I GTCTC 3 cut(s) 380, 848, 906
AlwI GGATC 8 cut(s) 78, 190, 291, 318, 572, 693, 873, 927
AlwNI CAGNNNCTG 2 cut(s) 259, 647
Ama87I CYCGRG 3 cut(s) 178, 381, 618
AoxI GGCC 9 cut(s) 15, 130, 205, 342, 504, 546, 711, 807, 879
ApeKI GCWGC 6 cut(s) 253, 256, 559, 638, 758, 761
ApoI RAATTY 1 cut(s) 830
AspS9I GGNCC 2 cut(s) 16, 342
AsuHPI GGTGA 5 cut(s) 83, 130, 167, 493, 593
AsuNHI GCTAGC 1 cut(s) 754
AvaI CYCGRG 3 cut(s) 178, 381, 618
BaeGI GKGCMC 1 cut(s) 403
BaeI ACNNNNGTAYC 2 cut(s) 102, 135
BanI GGYRCC 2 cut(s) 93, 890
BanII GRGCYC 1 cut(s) 744
BarI GAAGNNNNNNTAC 2 cut(s) 659, 691
BauI CACGAG 1 cut(s) 707
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 744
BbvCI CCTCAGC 1 cut(s) 591
BbvI GCAGC 6 cut(s) 243, 265, 571, 625, 745, 748
BccI CCATC 3 cut(s) 254, 538, 659
BceAI ACGGC 2 cut(s) 357, 698
BcgI CGANNNNNNTGC 4 cut(s) 83, 117, 454, 488
BciT130I CCWGG 3 cut(s) 362, 680, 848
BcoDI GTCTC 3 cut(s) 380, 848, 906
BfaI CTAG 1 cut(s) 755
BfmI CTRYAG 1 cut(s) 639
BfuAI ACCTGC 1 cut(s) 469
BmeT110I CYCGRG 3 cut(s) 178, 381, 618
BmgT120I GGNCC 2 cut(s) 16, 342
BmiI GGNNCC 3 cut(s) 18, 95, 892
BmrI ACTGGG 2 cut(s) 14, 54
BmsI GCATC 2 cut(s) 109, 384
BmtI GCTAGC 1 cut(s) 758
BmuI ACTGGG 2 cut(s) 14, 54
BpiI GAAGAC 1 cut(s) 189
BplI GAGNNNNNCTC 4 cut(s) 512, 544, 731, 763
BpmI CTGGAG 3 cut(s) 533, 701, 869
Bpu10I CCTNAGC 1 cut(s) 591
BpuEI CTTGAG 1 cut(s) 596
BsaBI GATNNNNATC 1 cut(s) 444
BsaHI GRCGYC 1 cut(s) 426
BsaI GGTCTC 2 cut(s) 848, 906
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 713, 743
Bsc4I CCNNNNNNNGG 8 cut(s) 306, 334, 340, 657, 697, 702, 772, 834
Bse118I RCCGGY 3 cut(s) 13, 96, 893
Bse1I ACTGG 4 cut(s) 20, 49, 133, 154
Bse8I GATNNNNATC 1 cut(s) 444
BseBI CCWGG 3 cut(s) 362, 680, 848
BseGI GGATG 1 cut(s) 142
BseJI GATNNNNATC 1 cut(s) 444
BseLI CCNNNNNNNGG 8 cut(s) 306, 334, 340, 657, 697, 702, 772, 834
BseMII CTCAG 5 cut(s) 251, 531, 582, 747, 917
BseNI ACTGG 4 cut(s) 20, 49, 133, 154
BseRI GAGGAG 2 cut(s) 470, 734
BseSI GKGCMC 1 cut(s) 403
BseX3I CGGCCG 1 cut(s) 807
BseXI GCAGC 6 cut(s) 243, 265, 571, 625, 745, 748
Bsh1236I CGCG 2 cut(s) 569, 698
Bsh1285I CGRYCG 2 cut(s) 334, 810
BshFI GGCC 9 cut(s) 17, 132, 207, 344, 506, 548, 713, 809, 881
BshNI GGYRCC 2 cut(s) 93, 890
BsiEI CGRYCG 2 cut(s) 334, 810
BsiHKAI GWGCWC 1 cut(s) 744
BsiHKCI CYCGRG 3 cut(s) 178, 381, 618
BslFI GGGAC 2 cut(s) 539, 635
BslI CCNNNNNNNGG 8 cut(s) 306, 334, 340, 657, 697, 702, 772, 834
BsmAI GTCTC 3 cut(s) 380, 848, 906
BsmBI CGTCTC 1 cut(s) 380
BsmFI GGGAC 2 cut(s) 539, 635
BsmI GAATGC 1 cut(s) 465
BsnI GGCC 9 cut(s) 17, 132, 207, 344, 506, 548, 713, 809, 881
Bso31I GGTCTC 2 cut(s) 848, 906
BsoBI CYCGRG 3 cut(s) 178, 381, 618
Bsp1286I GDGCHC 2 cut(s) 403, 744
Bsp143I GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
BspANI GGCC 9 cut(s) 17, 132, 207, 344, 506, 548, 713, 809, 881
BspCNI CTCAG 5 cut(s) 252, 532, 583, 746, 916
BspFNI CGCG 2 cut(s) 569, 698
BspLI GGNNCC 3 cut(s) 18, 95, 892
BspMAI CTGCAG 1 cut(s) 643
BspMI ACCTGC 1 cut(s) 469
BspOI GCTAGC 1 cut(s) 758
BspPI GGATC 8 cut(s) 78, 190, 291, 318, 572, 693, 873, 927
BspQI GCTCTTC 1 cut(s) 732
BspT107I GGYRCC 2 cut(s) 93, 890
BspTNI GGTCTC 2 cut(s) 848, 906
BsrBI CCGCTC 1 cut(s) 523
BsrFI RCCGGY 3 cut(s) 13, 96, 893
BsrI ACTGG 4 cut(s) 20, 49, 133, 154
BssAI RCCGGY 3 cut(s) 13, 96, 893
BssMI GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
BssNI GRCGYC 1 cut(s) 426
BssSI CACGAG 1 cut(s) 707
BssT1I CCWWGG 2 cut(s) 142, 345
Bst2BI CACGAG 1 cut(s) 707
Bst2UI CCWGG 3 cut(s) 362, 680, 848
Bst6I CTCTTC 5 cut(s) 74, 152, 410, 476, 732
BstACI GRCGYC 1 cut(s) 426
BstAPI GCANNNNNTGC 1 cut(s) 647
BstC8I GCNNGC 3 cut(s) 399, 430, 756
BstDEI CTNAG 7 cut(s) 260, 540, 555, 591, 733, 817, 903
BstDSI CCRYGG 2 cut(s) 696, 714
BstF5I GGATG 1 cut(s) 142
BstFNI CGCG 2 cut(s) 569, 698
BstKTI GATC 9 cut(s) 86, 175, 185, 299, 313, 567, 688, 868, 922
BstMAI GTCTC 3 cut(s) 380, 848, 906
BstMBI GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
BstMCI CGRYCG 2 cut(s) 334, 810
BstMWI GCNNNNNNNGC 5 cut(s) 250, 301, 425, 545, 647
BstNI CCWGG 3 cut(s) 362, 680, 848
BstSFI CTRYAG 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 403
BstUI CGCG 2 cut(s) 569, 698
BstV1I GCAGC 6 cut(s) 243, 265, 571, 625, 745, 748
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 2 cut(s) 83, 310
BstXI CCANNNNNNTGG 1 cut(s) 149
BstYI RGATCY 2 cut(s) 83, 310
BstZI CGGCCG 1 cut(s) 807
BsuRI GGCC 9 cut(s) 17, 132, 207, 344, 506, 548, 713, 809, 881
BtgI CCRYGG 2 cut(s) 696, 714
BtgZI GCGATG 1 cut(s) 66
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 3 cut(s) 27, 42, 126
BveI ACCTGC 1 cut(s) 469
Cac8I GCNNGC 3 cut(s) 399, 430, 756
CaiI CAGNNNCTG 2 cut(s) 259, 647
Cfr10I RCCGGY 3 cut(s) 13, 96, 893
Cfr13I GGNCC 2 cut(s) 16, 342
Cfr42I CCGCGG 1 cut(s) 699
Cfr9I CCCGGG 3 cut(s) 178, 381, 618
CseI GACGC 1 cut(s) 434
Csp6I GTAC 6 cut(s) 11, 124, 268, 415, 724, 814
CviAII CATG 2 cut(s) 301, 657
CviQI GTAC 6 cut(s) 11, 124, 268, 415, 724, 814
DdeI CTNAG 7 cut(s) 260, 540, 555, 591, 733, 817, 903
DpnI GATC 9 cut(s) 85, 174, 184, 298, 312, 566, 687, 867, 921
DpnII GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
EaeI YGGCCR 4 cut(s) 130, 546, 807, 879
EagI CGGCCG 1 cut(s) 807
Eam1104I CTCTTC 5 cut(s) 74, 152, 410, 476, 732
EarI CTCTTC 5 cut(s) 74, 152, 410, 476, 732
Ecl136II GAGCTC 1 cut(s) 742
EclXI CGGCCG 1 cut(s) 807
Eco130I CCWWGG 2 cut(s) 142, 345
Eco24I GRGCYC 1 cut(s) 744
Eco31I GGTCTC 2 cut(s) 848, 906
Eco52I CGGCCG 1 cut(s) 807
Eco53kI GAGCTC 1 cut(s) 742
Eco57I CTGAAG 2 cut(s) 335, 470
Eco88I CYCGRG 3 cut(s) 178, 381, 618
EcoICRI GAGCTC 1 cut(s) 742
EcoRII CCWGG 3 cut(s) 360, 678, 846
EcoT14I CCWWGG 2 cut(s) 142, 345
EcoT38I GRGCYC 1 cut(s) 744
ErhI CCWWGG 2 cut(s) 142, 345
Esp3I CGTCTC 1 cut(s) 380
FaeI CATG 2 cut(s) 304, 660
FaiI YATR 4 cut(s) 302, 658, 752, 785
FaqI GGGAC 2 cut(s) 539, 635
FatI CATG 2 cut(s) 300, 656
FauI CCCGC 5 cut(s) 226, 390, 516, 703, 831
FokI GGATG 1 cut(s) 149
FriOI GRGCYC 1 cut(s) 744
FspBI CTAG 1 cut(s) 755
GsuI CTGGAG 3 cut(s) 533, 701, 869
HaeIII GGCC 9 cut(s) 17, 132, 207, 344, 506, 548, 713, 809, 881
HgaI GACGC 1 cut(s) 434
Hin1I GRCGYC 1 cut(s) 426
Hin1II CATG 2 cut(s) 304, 660
HinfI GANTC 6 cut(s) 188, 367, 386, 527, 623, 644
HphI GGTGA 5 cut(s) 83, 130, 167, 493, 593
Hpy166II GTNNAC 2 cut(s) 126, 415
Hpy188I TCNGA 5 cut(s) 187, 315, 450, 736, 906
Hpy188III TCNNGA 1 cut(s) 869
Hpy8I GTNNAC 2 cut(s) 126, 415
HpyAV CCTTC 8 cut(s) 310, 445, 496, 511, 655, 661, 701, 856
HpyCH4IV ACGT 1 cut(s) 122
HpyCH4V TGCA 1 cut(s) 641
HpyF10VI GCNNNNNNNGC 5 cut(s) 250, 301, 425, 545, 647
HpyF3I CTNAG 7 cut(s) 260, 540, 555, 591, 733, 817, 903
HpySE526I ACGT 1 cut(s) 122
Hsp92I GRCGYC 1 cut(s) 426
Hsp92II CATG 2 cut(s) 304, 660
KspI CCGCGG 1 cut(s) 699
Kzo9I GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
LguI GCTCTTC 1 cut(s) 732
LmnI GCTCC 3 cut(s) 48, 520, 571
Lsp1109I GCAGC 6 cut(s) 243, 265, 571, 625, 745, 748
LweI GCATC 2 cut(s) 109, 384
MaeI CTAG 1 cut(s) 755
MaeII ACGT 1 cut(s) 122
MaeIII GTNAC 1 cut(s) 118
MalI GATC 9 cut(s) 85, 174, 184, 298, 312, 566, 687, 867, 921
MbiI CCGCTC 1 cut(s) 523
MboI GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
MflI RGATCY 2 cut(s) 83, 310
MhlI GDGCHC 2 cut(s) 403, 744
MluCI AATT 1 cut(s) 830
MlyI GAGTC 4 cut(s) 197, 521, 617, 653
MseI TTAA 1 cut(s) 492
MslI CAYNNNNRTG 1 cut(s) 749
MspA1I CMGCKG 3 cut(s) 256, 562, 698
Mva1269I GAATGC 1 cut(s) 465
MvaI CCWGG 3 cut(s) 362, 680, 848
MvnI CGCG 2 cut(s) 569, 698
MwoI GCNNNNNNNGC 5 cut(s) 250, 301, 425, 545, 647
NdeII GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
NheI GCTAGC 1 cut(s) 754
NlaIII CATG 2 cut(s) 304, 660
NlaIV GGNNCC 3 cut(s) 18, 95, 892
NmuCI GTSAC 1 cut(s) 118
PaqCI CACCTGC 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 732
PcsI WCGNNNNNNNCGW 2 cut(s) 119, 276
PctI GAATGC 1 cut(s) 465
PfeI GAWTC 2 cut(s) 367, 386
PflMI CCANNNNNTGG 1 cut(s) 657
PfoI TCCNGGA 1 cut(s) 846
PleI GAGTC 4 cut(s) 196, 521, 617, 652
PpsI GAGTC 4 cut(s) 196, 521, 617, 652
Psp124BI GAGCTC 1 cut(s) 744
Psp6I CCWGG 3 cut(s) 360, 678, 846
PspGI CCWGG 3 cut(s) 360, 678, 846
PspN4I GGNNCC 3 cut(s) 18, 95, 892
PspPI GGNCC 2 cut(s) 16, 342
PstI CTGCAG 1 cut(s) 643
PstNI CAGNNNCTG 2 cut(s) 259, 647
PsuI RGATCY 2 cut(s) 83, 310
PvuII CAGCTG 1 cut(s) 256
RsaI GTAC 6 cut(s) 12, 125, 269, 416, 725, 815
RsaNI GTAC 6 cut(s) 11, 124, 268, 415, 724, 814
RseI CAYNNNNRTG 1 cut(s) 749
SacI GAGCTC 1 cut(s) 744
SacII CCGCGG 1 cut(s) 699
SapI GCTCTTC 1 cut(s) 732
SaqAI TTAA 1 cut(s) 492
Sau3AI GATC 9 cut(s) 83, 172, 182, 296, 310, 564, 685, 865, 919
Sau96I GGNCC 2 cut(s) 16, 342
SchI GAGTC 4 cut(s) 197, 521, 617, 653
SduI GDGCHC 2 cut(s) 403, 744
SfaNI GCATC 2 cut(s) 109, 384
SfcI CTRYAG 1 cut(s) 639
Sfr303I CCGCGG 1 cut(s) 699
SgrBI CCGCGG 1 cut(s) 699
SmaI CCCGGG 3 cut(s) 180, 383, 620
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
Sse9I AATT 1 cut(s) 830
SspMI CTAG 1 cut(s) 755
SstI GAGCTC 1 cut(s) 744
StyI CCWWGG 2 cut(s) 142, 345
TaiI ACGT 1 cut(s) 125
TaqI TCGA 2 cut(s) 103, 330
TasI AATT 1 cut(s) 830
TatI WGTACW 1 cut(s) 723
TauI GCSGC 4 cut(s) 551, 809, 878, 881
TfiI GAWTC 2 cut(s) 367, 386
Tru1I TTAA 1 cut(s) 492
Tru9I TTAA 1 cut(s) 492
TscAI CASTG 3 cut(s) 27, 49, 133
TseFI GTSAC 1 cut(s) 118
TseI GCWGC 6 cut(s) 253, 256, 559, 638, 758, 761
Tsp45I GTSAC 1 cut(s) 118
TspDTI ATGAA 3 cut(s) 297, 800, 837
TspGWI ACGGA 2 cut(s) 128, 613
TspMI CCCGGG 3 cut(s) 178, 381, 618
TspRI CASTG 3 cut(s) 27, 49, 133
Van91I CCANNNNNTGG 1 cut(s) 657
XapI RAATTY 1 cut(s) 830
XmaI CCCGGG 3 cut(s) 178, 381, 618
XspI CTAG 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.