Rmu_sc0003865.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003865.1
OG0000087
Physical Location & Seq
Reverse (-)
1461 .. 4061
2601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003865.1_g000002.1.cds

Sequence Viewer

Length: 1713 bp
atgctgaacctatccccgtggcagctgaccccgaatgtcgttcgccaaatatacagtatgatggctatgtgggacttgtgccaacaagggtggccctccataaatgagttccgcgcggtacatcgggtactgtactctaggaagcagtcttgtgcgggtacgattacctttgccgctagggattacgagccgctagttaccgacatgcctacctcgatgagtaaaaggtggaggaacaaagtgttcctagctggggggcagtggcagataaagaataagaagtggcagctgaccggtactttccaagctatcggggaccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatatgccgtgtggtcagagaaggagaggagctcttatagattcatctggcactctatactttataggctagggttagggtggctccccgtgaaagcgccgaagaggaaacctcggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccagggagaagacgccctgcacatcgacgttgacctagggtcgaaaggtacgagtcggtccattgaggaaacccttctggagatcaccgatgagggatacggtgaacctgatcccgacgctcccgtgacccacgtcgcgcagccctccatggccgatgttattaagatagatgacaccggaatgggaaaagtaccggtcccagtgcctatttcctctcgttctactgggagcgatgaggcattactccccggtgagaagaagagatcccacaggcaccggcatcggactgataaggaggtgacgtacactggccgggatgtccaaggtactggtgcgaagaggcaaaagaaggatcacccgggatcagagtcgttgccttctcttggcctgttatctcccgccattcctgtaatccccaagaagcctatcaagcagctgctgagtgagtacggggttgccgatgaaaagttcgtacggtccatgcttggggatctgaaggatattgacctcgaccgggttcgggtcaaggataacactccccaggagaatcgccgtctcgcctgggaatcaattatgcggccactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggggaaggagcgggactcattgagggctgagatggccgcccctaagcagcggatcgcggagcttgagggtgaggttgctgaggcgcgggaagaggtaaagaacgcccgggactctgagaaaaaggctgcagagtctgccgtctcgtggaaggagaaagcagaccacctggaggatcgtcttcccgcggagaggcacgaggccgtggaggagtacaagtcctcggaggagctcatctctatgctagctgctgcccaagataaggctgtcattatgaagttcaaggagtgggtggcggccgggtatttagatgaagccaaattcaggcggggtctcctgagaaaaagaagaaggatcgggaggcggcggccaagtctggtgccggtgggtctcagagtaccgggggcgatcgacatcagtgatagtgtggtcatgtcgttgcaaggaattacacacaatgtgtcctttagtaaaactgttgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

570

Amino Acids

64.56

Weight (kDa)

9.11

Isoelectric Point (pI)

52.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1186
Acc36I ACCTGC 1 cut(s) 1186
AccB1I GGYRCC 2 cut(s) 810, 1606
AccB7I CCANNNNNTGG 1 cut(s) 520
AccBSI CCGCTC 1 cut(s) 1240
AccII CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
AclWI GGATC 8 cut(s) 641, 795, 897, 907, 1035, 1289, 1410, 1589
AcoI YGGCCR 6 cut(s) 687, 847, 1115, 1263, 1524, 1595
AcsI RAATTY 1 cut(s) 1547
AcuI CTGAAG 2 cut(s) 1052, 1187
AcyI GRCGYC 2 cut(s) 549, 1143
AdeI CACNNNGTG 1 cut(s) 1687
AgeI ACCGGT 2 cut(s) 293, 730
AgsI TTSAA 2 cut(s) 1126, 1510
AhdI GACNNNNNGTC 1 cut(s) 574
AjiI CACGTC 1 cut(s) 670
AjnI CCWGG 4 cut(s) 537, 1077, 1097, 1395
Alw21I GWGCWC 2 cut(s) 398, 1461
Alw26I GTCTC 4 cut(s) 1097, 1375, 1565, 1622
AlwI GGATC 8 cut(s) 641, 795, 897, 907, 1035, 1289, 1410, 1589
AlwNI CAGNNNCTG 2 cut(s) 976, 1364
Ama87I CYCGRG 3 cut(s) 360, 895, 1335
ApeKI GCWGC 9 cut(s) 22, 286, 676, 970, 973, 1276, 1355, 1475, 1478
ApoI RAATTY 1 cut(s) 1547
AsiGI ACCGGT 2 cut(s) 293, 730
Asp700I GAANNNNTTC 1 cut(s) 609
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 4 cut(s) 116, 463, 676, 1315
AspS9I GGNCC 6 cut(s) 93, 316, 535, 594, 733, 1014
AsuHPI GGTGA 7 cut(s) 613, 650, 800, 847, 884, 1210, 1310
AsuNHI GCTAGC 1 cut(s) 1471
AvaI CYCGRG 3 cut(s) 360, 895, 1335
AvaII GGWCC 4 cut(s) 316, 594, 733, 1014
AvrII CCTAGG 1 cut(s) 571
BanI GGYRCC 2 cut(s) 810, 1606
BanII GRGCYC 2 cut(s) 398, 1461
BauI CACGAG 2 cut(s) 1372, 1424
BbsI GAAGAC 2 cut(s) 552, 1400
Bbv12I GWGCWC 2 cut(s) 398, 1461
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 9 cut(s) 34, 298, 688, 960, 982, 1288, 1342, 1462, 1465
BccI CCATC 5 cut(s) 55, 496, 514, 526, 1255
BceAI ACGGC 4 cut(s) 356, 1074, 1352, 1415
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 4 cut(s) 539, 1079, 1099, 1397
BciVI GTATCC 1 cut(s) 626
BcoDI GTCTC 4 cut(s) 1097, 1375, 1565, 1622
BfaI CTAG 7 cut(s) 138, 177, 194, 248, 434, 572, 1472
BfmI CTRYAG 1 cut(s) 1356
BfoI RGCGCY 1 cut(s) 464
BfuAI ACCTGC 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 626
BlnI CCTAGG 1 cut(s) 571
Bme18I GGWCC 4 cut(s) 316, 594, 733, 1014
BmeRI GACNNNNNGTC 1 cut(s) 574
BmeT110I CYCGRG 3 cut(s) 360, 895, 1335
BmgBI CACGTC 1 cut(s) 670
BmgT120I GGNCC 6 cut(s) 93, 316, 535, 594, 733, 1014
BmiI GGNNCC 5 cut(s) 317, 449, 735, 812, 1608
BmrI ACTGGG 2 cut(s) 731, 771
BmsI GCATC 2 cut(s) 499, 826
BmtI GCTAGC 1 cut(s) 1475
BmuI ACTGGG 2 cut(s) 731, 771
BoxI GACNNNNGTC 1 cut(s) 668
BpiI GAAGAC 2 cut(s) 552, 1400
BplI GAGNNNNNCTC 8 cut(s) 380, 412, 460, 492, 1229, 1261, 1448, 1480
BpmI CTGGAG 2 cut(s) 635, 1418
Bpu10I CCTNAGC 2 cut(s) 1272, 1308
BpuEI CTTGAG 1 cut(s) 1313
BsaBI GATNNNNATC 2 cut(s) 1161, 1640
BsaHI GRCGYC 2 cut(s) 549, 1143
BsaI GGTCTC 2 cut(s) 1565, 1622
BsaWI WCCGGW 3 cut(s) 293, 713, 730
BsaXI ACNNNNNCTCC 4 cut(s) 824, 854, 1430, 1460
Bse118I RCCGGY 4 cut(s) 293, 730, 813, 1609
Bse1I ACTGG 5 cut(s) 319, 737, 766, 850, 871
Bse8I GATNNNNATC 2 cut(s) 1161, 1640
BseBI CCWGG 4 cut(s) 539, 1079, 1099, 1397
BseGI GGATG 3 cut(s) 507, 511, 859
BseJI GATNNNNATC 2 cut(s) 1161, 1640
BseMII CTCAG 6 cut(s) 968, 1248, 1299, 1335, 1556, 1633
BseNI ACTGG 5 cut(s) 319, 737, 766, 850, 871
BseRI GAGGAG 5 cut(s) 406, 506, 1187, 1451, 1469
BseX3I CGGCCG 1 cut(s) 1524
BseXI GCAGC 9 cut(s) 34, 298, 688, 960, 982, 1288, 1342, 1462, 1465
BseYI CCCAGC 2 cut(s) 251, 1228
BsgI GTGCAG 1 cut(s) 539
Bsh1236I CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
Bsh1285I CGRYCG 3 cut(s) 1051, 1527, 1638
BshNI GGYRCC 2 cut(s) 810, 1606
BshTI ACCGGT 2 cut(s) 293, 730
BsiEI CGRYCG 3 cut(s) 1051, 1527, 1638
BsiHKAI GWGCWC 2 cut(s) 398, 1461
BsiHKCI CYCGRG 3 cut(s) 360, 895, 1335
BsiWI CGTACG 1 cut(s) 1009
BslFI GGGAC 5 cut(s) 86, 329, 719, 1256, 1352
BsmAI GTCTC 4 cut(s) 1097, 1375, 1565, 1622
BsmBI CGTCTC 2 cut(s) 1097, 1375
BsmFI GGGAC 5 cut(s) 86, 329, 719, 1256, 1352
Bso31I GGTCTC 2 cut(s) 1565, 1622
BsoBI CYCGRG 3 cut(s) 360, 895, 1335
Bsp1286I GDGCHC 2 cut(s) 398, 1461
Bsp19I CCATGG 1 cut(s) 684
BspCNI CTCAG 6 cut(s) 969, 1249, 1300, 1336, 1557, 1632
BspFNI CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
BspLI GGNNCC 5 cut(s) 317, 449, 735, 812, 1608
BspMAI CTGCAG 1 cut(s) 1360
BspMI ACCTGC 1 cut(s) 1186
BspOI GCTAGC 1 cut(s) 1475
BspPI GGATC 8 cut(s) 641, 795, 897, 907, 1035, 1289, 1410, 1589
BspT107I GGYRCC 2 cut(s) 810, 1606
BspTNI GGTCTC 2 cut(s) 1565, 1622
BsrBI CCGCTC 1 cut(s) 1240
BsrFI RCCGGY 4 cut(s) 293, 730, 813, 1609
BsrI ACTGG 5 cut(s) 319, 737, 766, 850, 871
BssAI RCCGGY 4 cut(s) 293, 730, 813, 1609
BssNI GRCGYC 2 cut(s) 549, 1143
BssSI CACGAG 2 cut(s) 1372, 1424
BssT1I CCWWGG 3 cut(s) 571, 684, 859
Bst2BI CACGAG 2 cut(s) 1372, 1424
Bst2UI CCWGG 4 cut(s) 539, 1079, 1099, 1397
Bst4CI ACNGT 5 cut(s) 56, 132, 638, 1014, 1705
Bst6I CTCTTC 6 cut(s) 344, 461, 791, 869, 1127, 1314
BstACI GRCGYC 2 cut(s) 549, 1143
BstAPI GCANNNNNTGC 1 cut(s) 1364
BstC8I GCNNGC 2 cut(s) 1147, 1473
BstDEI CTNAG 7 cut(s) 977, 1257, 1272, 1308, 1344, 1565, 1619
BstDSI CCRYGG 4 cut(s) 17, 684, 1413, 1431
BstENI CCTNNNNNAGG 1 cut(s) 480
BstF5I GGATG 3 cut(s) 507, 511, 859
BstFNI CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 4 cut(s) 116, 463, 676, 1315
BstMAI GTCTC 4 cut(s) 1097, 1375, 1565, 1622
BstMCI CGRYCG 3 cut(s) 1051, 1527, 1638
BstMWI GCNNNNNNNGC 4 cut(s) 967, 1142, 1262, 1364
BstNI CCWGG 4 cut(s) 539, 1079, 1099, 1397
BstNSI RCATGY 2 cut(s) 208, 529
BstPAI GACNNNNGTC 1 cut(s) 668
BstSFI CTRYAG 1 cut(s) 1356
BstUI CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
BstV1I GCAGC 9 cut(s) 34, 298, 688, 960, 982, 1288, 1342, 1462, 1465
BstV2I GAAGAC 2 cut(s) 552, 1400
BstX2I RGATCY 2 cut(s) 800, 1027
BstXI CCANNNNNNTGG 1 cut(s) 866
BstYI RGATCY 2 cut(s) 800, 1027
BstZI CGGCCG 1 cut(s) 1524
BsuI GTATCC 1 cut(s) 626
BtgI CCRYGG 4 cut(s) 17, 684, 1413, 1431
BtgZI GCGATG 1 cut(s) 783
BtrI CACGTC 1 cut(s) 670
BtsCI GGATG 3 cut(s) 507, 511, 859
BtsI GCAGTG 1 cut(s) 266
BtsIMutI CAGTG 4 cut(s) 266, 744, 843, 1651
BveI ACCTGC 1 cut(s) 1186
Cac8I GCNNGC 2 cut(s) 1147, 1473
CaiI CAGNNNCTG 2 cut(s) 976, 1364
CfoI GCGC 4 cut(s) 116, 463, 676, 1315
Cfr10I RCCGGY 4 cut(s) 293, 730, 813, 1609
Cfr13I GGNCC 6 cut(s) 93, 316, 535, 594, 733, 1014
Cfr42I CCGCGG 1 cut(s) 1416
Cfr9I CCCGGG 3 cut(s) 360, 895, 1335
CseI GACGC 3 cut(s) 557, 662, 1151
CspAI ACCGGT 2 cut(s) 293, 730
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 6 cut(s) 205, 526, 685, 1018, 1211, 1660
DdeI CTNAG 7 cut(s) 977, 1257, 1272, 1308, 1344, 1565, 1619
DraIII CACNNNGTG 1 cut(s) 1687
DriI GACNNNNNGTC 1 cut(s) 574
EaeI YGGCCR 6 cut(s) 687, 847, 1115, 1263, 1524, 1595
EagI CGGCCG 1 cut(s) 1524
Eam1104I CTCTTC 6 cut(s) 344, 461, 791, 869, 1127, 1314
Eam1105I GACNNNNNGTC 1 cut(s) 574
EarI CTCTTC 6 cut(s) 344, 461, 791, 869, 1127, 1314
Ecl136II GAGCTC 2 cut(s) 396, 1459
EclXI CGGCCG 1 cut(s) 1524
Eco130I CCWWGG 3 cut(s) 571, 684, 859
Eco24I GRGCYC 2 cut(s) 398, 1461
Eco31I GGTCTC 2 cut(s) 1565, 1622
Eco47I GGWCC 4 cut(s) 316, 594, 733, 1014
Eco52I CGGCCG 1 cut(s) 1524
Eco53kI GAGCTC 2 cut(s) 396, 1459
Eco57I CTGAAG 2 cut(s) 1052, 1187
Eco88I CYCGRG 3 cut(s) 360, 895, 1335
EcoICRI GAGCTC 2 cut(s) 396, 1459
EcoNI CCTNNNNNAGG 1 cut(s) 480
EcoRII CCWGG 4 cut(s) 537, 1077, 1097, 1395
EcoT14I CCWWGG 3 cut(s) 571, 684, 859
EcoT38I GRGCYC 2 cut(s) 398, 1461
ErhI CCWWGG 3 cut(s) 571, 684, 859
Esp3I CGTCTC 2 cut(s) 1097, 1375
FaeI CATG 6 cut(s) 208, 529, 688, 1021, 1214, 1663
FaqI GGGAC 5 cut(s) 86, 329, 719, 1256, 1352
FatI CATG 6 cut(s) 204, 525, 684, 1017, 1210, 1659
FauI CCCGC 6 cut(s) 148, 943, 1233, 1308, 1420, 1548
FokI GGATG 3 cut(s) 514, 518, 866
FriOI GRGCYC 2 cut(s) 398, 1461
FspBI CTAG 7 cut(s) 138, 177, 194, 248, 434, 572, 1472
GlaI GCGC 4 cut(s) 115, 462, 675, 1314
GsaI CCCAGC 2 cut(s) 255, 1232
GsuI CTGGAG 2 cut(s) 635, 1418
HaeII RGCGCY 1 cut(s) 464
HgaI GACGC 3 cut(s) 557, 662, 1151
HhaI GCGC 4 cut(s) 116, 463, 676, 1315
Hin1I GRCGYC 2 cut(s) 549, 1143
Hin1II CATG 6 cut(s) 208, 529, 688, 1021, 1214, 1663
Hin6I GCGC 4 cut(s) 114, 461, 674, 1313
HinP1I GCGC 4 cut(s) 114, 461, 674, 1313
HincII GTYRAC 1 cut(s) 568
HindII GTYRAC 1 cut(s) 568
HinfI GANTC 8 cut(s) 405, 589, 905, 1084, 1103, 1244, 1340, 1361
HphI GGTGA 7 cut(s) 613, 650, 800, 847, 884, 1210, 1310
Hpy166II GTNNAC 4 cut(s) 568, 641, 843, 1132
Hpy188III TCNNGA 4 cut(s) 614, 650, 1564, 1585
Hpy8I GTNNAC 4 cut(s) 568, 641, 843, 1132
Hpy99I CGWCG 3 cut(s) 566, 656, 674
HpyCH4III ACNGT 5 cut(s) 56, 132, 638, 1014, 1705
HpyCH4IV ACGT 3 cut(s) 564, 669, 839
HpyCH4V TGCA 3 cut(s) 556, 1358, 1669
HpyF10VI GCNNNNNNNGC 4 cut(s) 967, 1142, 1262, 1364
HpyF3I CTNAG 7 cut(s) 977, 1257, 1272, 1308, 1344, 1565, 1619
HpySE526I ACGT 3 cut(s) 564, 669, 839
Hsp92I GRCGYC 2 cut(s) 549, 1143
Hsp92II CATG 6 cut(s) 208, 529, 688, 1021, 1214, 1663
HspAI GCGC 4 cut(s) 114, 461, 674, 1313
KspI CCGCGG 1 cut(s) 1416
LmnI GCTCC 7 cut(s) 393, 453, 661, 765, 1237, 1288, 1456
Lsp1109I GCAGC 9 cut(s) 34, 298, 688, 960, 982, 1288, 1342, 1462, 1465
LweI GCATC 2 cut(s) 499, 826
MaeI CTAG 7 cut(s) 138, 177, 194, 248, 434, 572, 1472
MaeII ACGT 3 cut(s) 564, 669, 839
MaeIII GTNAC 3 cut(s) 196, 661, 835
MbiI CCGCTC 1 cut(s) 1240
MflI RGATCY 2 cut(s) 800, 1027
MhlI GDGCHC 2 cut(s) 398, 1461
MluCI AATT 3 cut(s) 1107, 1547, 1674
MlyI GAGTC 5 cut(s) 598, 914, 1238, 1334, 1370
MroXI GAANNNNTTC 1 cut(s) 609
MseI TTAA 1 cut(s) 699
MslI CAYNNNNRTG 3 cut(s) 530, 716, 1466
MspA1I CMGCKG 5 cut(s) 25, 289, 973, 1279, 1415
MvaI CCWGG 4 cut(s) 539, 1079, 1099, 1397
MvnI CGCG 6 cut(s) 114, 116, 674, 1286, 1315, 1415
MwoI GCNNNNNNNGC 4 cut(s) 967, 1142, 1262, 1364
NcoI CCATGG 1 cut(s) 684
NheI GCTAGC 1 cut(s) 1471
NlaIII CATG 6 cut(s) 208, 529, 688, 1021, 1214, 1663
NlaIV GGNNCC 5 cut(s) 317, 449, 735, 812, 1608
NmuCI GTSAC 2 cut(s) 661, 835
NspI RCATGY 2 cut(s) 208, 529
PaqCI CACCTGC 1 cut(s) 1186
PcsI WCGNNNNNNNCGW 2 cut(s) 584, 993
PdmI GAANNNNTTC 1 cut(s) 609
PfeI GAWTC 3 cut(s) 405, 1084, 1103
Pfl23II CGTACG 1 cut(s) 1009
PflMI CCANNNNNTGG 1 cut(s) 520
PinAI ACCGGT 2 cut(s) 293, 730
Ple19I CGATCG 1 cut(s) 1638
PleI GAGTC 5 cut(s) 597, 913, 1238, 1334, 1369
PpsI GAGTC 5 cut(s) 597, 913, 1238, 1334, 1369
PshAI GACNNNNGTC 1 cut(s) 668
Psp124BI GAGCTC 2 cut(s) 398, 1461
Psp6I CCWGG 4 cut(s) 537, 1077, 1097, 1395
PspFI CCCAGC 2 cut(s) 251, 1228
PspGI CCWGG 4 cut(s) 537, 1077, 1097, 1395
PspLI CGTACG 1 cut(s) 1009
PspN4I GGNNCC 5 cut(s) 317, 449, 735, 812, 1608
PspPI GGNCC 6 cut(s) 93, 316, 535, 594, 733, 1014
PstI CTGCAG 1 cut(s) 1360
PstNI CAGNNNCTG 2 cut(s) 976, 1364
PsuI RGATCY 2 cut(s) 800, 1027
PvuI CGATCG 1 cut(s) 1638
PvuII CAGCTG 3 cut(s) 25, 289, 973
RseI CAYNNNNRTG 3 cut(s) 530, 716, 1466
SacI GAGCTC 2 cut(s) 398, 1461
SacII CCGCGG 1 cut(s) 1416
SaqAI TTAA 1 cut(s) 699
Sau96I GGNCC 6 cut(s) 93, 316, 535, 594, 733, 1014
SchI GAGTC 5 cut(s) 598, 914, 1238, 1334, 1370
SduI GDGCHC 2 cut(s) 398, 1461
SfaNI GCATC 2 cut(s) 499, 826
SfcI CTRYAG 1 cut(s) 1356
Sfr303I CCGCGG 1 cut(s) 1416
SgrBI CCGCGG 1 cut(s) 1416
SinI GGWCC 4 cut(s) 316, 594, 733, 1014
SmaI CCCGGG 3 cut(s) 362, 897, 1337
SmiMI CAYNNNNRTG 3 cut(s) 530, 716, 1466
SmlI CTYRAG 1 cut(s) 1292
SmoI CTYRAG 1 cut(s) 1292
Sse9I AATT 3 cut(s) 1107, 1547, 1674
SspMI CTAG 7 cut(s) 138, 177, 194, 248, 434, 572, 1472
SstI GAGCTC 2 cut(s) 398, 1461
StyI CCWWGG 3 cut(s) 571, 684, 859
TaaI ACNGT 5 cut(s) 56, 132, 638, 1014, 1705
TaiI ACGT 3 cut(s) 567, 672, 842
TaqI TCGA 5 cut(s) 215, 561, 578, 1047, 1638
TaqII GACCGA 1 cut(s) 582
TasI AATT 3 cut(s) 1107, 1547, 1674
TatI WGTACW 2 cut(s) 132, 1440
TauI GCSGC 7 cut(s) 176, 193, 1117, 1268, 1526, 1594, 1597
TfiI GAWTC 3 cut(s) 405, 1084, 1103
Tru1I TTAA 1 cut(s) 699
Tru9I TTAA 1 cut(s) 699
TscAI CASTG 4 cut(s) 266, 744, 850, 1651
TseFI GTSAC 2 cut(s) 661, 835
TseI GCWGC 9 cut(s) 22, 286, 676, 970, 973, 1276, 1355, 1475, 1478
Tsp45I GTSAC 2 cut(s) 661, 835
TspDTI ATGAA 5 cut(s) 397, 1014, 1199, 1517, 1554
TspMI CCCGGG 3 cut(s) 360, 895, 1335
TspRI CASTG 4 cut(s) 266, 744, 850, 1651
Van91I CCANNNNNTGG 1 cut(s) 520
VpaK11BI GGWCC 4 cut(s) 316, 594, 733, 1014
XagI CCTNNNNNAGG 1 cut(s) 480
XapI RAATTY 1 cut(s) 1547
XceI RCATGY 2 cut(s) 208, 529
XmaI CCCGGG 3 cut(s) 360, 895, 1335
XmaJI CCTAGG 1 cut(s) 571
XmnI GAANNNNTTC 1 cut(s) 609
XspI CTAG 7 cut(s) 138, 177, 194, 248, 434, 572, 1472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.