Rmu_sc0000698.1_g000063

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000698.1
OG0000087
Physical Location & Seq
Reverse (-)
301188 .. 303166
1979 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000698.1_g000063.1.cds

Sequence Viewer

Length: 1746 bp
atgacgatgaaggagatcatcgccatgcaactgaagtggggaataccggacgcggtggagcttaggcctctcaaggatggagagatggccgcgaatcctgccccggggtgggtggcgctgcacgagaaccagttccaccaagggttatcgctaccgctgccccggtgcctacagtatctattgcggatgctgaacctgtcaccggggcaggtgaccccgaatgctattcgacaaatagacagtatgatggccatatgggatttgtgccaacaagggtggccttccgtaaatgaattccgcgcggtacacagggtcctgtactcaaggaagctgtcctgtgcgggtacggtgacatttgccgctagggattacgaaccattagttaccgacatgccttcctcgatgagaaaaaggtggaggaataaagtatttctagctggggggcggtggcaaattaaaaataagaagtggcagctgaccggtaccttccaagctatcggggaccaggcctatactttatccgaggtagaaaggaagaggatagcccgggtatatgttgtttggacagagaaagagagaagctcttatagattcatccggcattctatactttataggctagggctaggatggctccccgtgaaagcgccgaagaggaaacaccggaaaggcaaagaggaggacataatggatgataatcagttgatggatatgctgatgggccagggagaagacgcccttcaccttgatgtcgacctagggtcgaaggtcgtgcagccttctgctgctgtcgtcatcacgatagctgataccgggatgggaaaggtaccggtctccgtgtctatttcttctcgctccactgggagcgatgaggcattgcttccaggtgagaagaaaagatcacataggcaccgacaccgaagtgataagcaggaggtgacgtataccggccgggatgttaagggatccggtgcgaagaggcagaagaaagatcacgcgggaccagagtcgtcgcctttgcttggcttgttgtctcctgccattccggtaatccccaagaagcctatcaagcagctgttgagtgagtatggggttgctgatgaaaagttcgtgcggtccatgcttagtgacctgaaggacattgacctcgaccgggtgcgggccaaggacaatacacccaaagagaatcgccgtcttgtccgggaatccatgatgcgggcactcttcaatgtgtacgctattgatgccagcgaggaagatactcatctgaatgaggaggttagcaatctctccgggcaggtgaagtatctgcatggcgagaaggccaagctggagaaagagtgggactcaatgattgccgagatggacgcggctaagcagcgaatcgtggagcttgagggtgaaatctctgaggcacgggaagaggtgaaaagtgctcgggactctgaaaaaaaggctgcagagtctgccatgtcatggaaggagaaggcagactacctggaggatcgctttcccgtggagaagcacgaggccgtggaggagtacaagtcctcccaagagctcattgctatgctaactgctgctcaagataaggctgtcatcatgaagttcaaggagtgggtggcggccgggtatttggatgaagccaaattcaggcgaggtcttcttgagaaaaagaagaaagatcaggaggcggcggtcaagtctggtgccggtggatcccagagtaccggtggcgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

581

Amino Acids

65.67

Weight (kDa)

9.09

Isoelectric Point (pI)

42.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 199, 1288
Acc36I ACCTGC 2 cut(s) 199, 1288
Acc65I GGTACC 2 cut(s) 482, 826
AccB1I GGYRCC 5 cut(s) 165, 482, 826, 909, 1709
AccB7I CCANNNNNTGG 1 cut(s) 1476
AccI GTMKAC 2 cut(s) 753, 944
AccII CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
AclWI GGATC 5 cut(s) 960, 973, 1512, 1713, 1726
AcoI YGGCCR 4 cut(s) 87, 249, 949, 1626
AcsI RAATTY 2 cut(s) 293, 1649
AcuI CTGAAG 2 cut(s) 53, 1154
AcyI GRCGYC 1 cut(s) 735
AfaI GTAC 8 cut(s) 306, 320, 346, 484, 828, 1235, 1544, 1729
AgeI ACCGGT 3 cut(s) 479, 829, 1730
AgsI TTSAA 2 cut(s) 1228, 1612
AhdI GACNNNNNGTC 1 cut(s) 760
AjnI CCWGG 4 cut(s) 504, 723, 883, 1497
AleI CACNNNNGTG 1 cut(s) 921
Alw21I GWGCWC 2 cut(s) 1438, 1563
Alw26I GTCTC 2 cut(s) 838, 1038
AlwI GGATC 5 cut(s) 960, 973, 1512, 1713, 1726
AlwNI CAGNNNCTG 1 cut(s) 1466
Ama87I CYCGRG 3 cut(s) 103, 546, 1437
ApeKI GCWGC 9 cut(s) 118, 157, 472, 775, 785, 1072, 1378, 1457, 1580
ApoI RAATTY 2 cut(s) 293, 1649
AsiGI ACCGGT 3 cut(s) 479, 829, 1730
Asp700I GAANNNNTTC 1 cut(s) 131
Asp718I GGTACC 2 cut(s) 482, 826
AspA2I CCTAGG 1 cut(s) 757
AspLEI GCGC 3 cut(s) 118, 302, 649
AspS9I GGNCC 6 cut(s) 313, 502, 721, 1001, 1116, 1161
AsuHPI GGTGA 9 cut(s) 192, 223, 361, 734, 899, 949, 1312, 1412, 1438
AvaI CYCGRG 3 cut(s) 103, 546, 1437
AvaII GGWCC 4 cut(s) 313, 502, 1001, 1116
AvrII CCTAGG 1 cut(s) 757
BaeGI GKGCMC 1 cut(s) 1222
BalI TGGCCA 1 cut(s) 251
BamHI GGATCC 2 cut(s) 965, 1718
BanI GGYRCC 5 cut(s) 165, 482, 826, 909, 1709
BanII GRGCYC 1 cut(s) 1563
BarI GAAGNNNNNNTAC 2 cut(s) 1478, 1510
BauI CACGAG 2 cut(s) 122, 1526
BbsI GAAGAC 2 cut(s) 738, 1655
Bbv12I GWGCWC 2 cut(s) 1438, 1563
BbvI GCAGC 9 cut(s) 105, 144, 484, 772, 787, 1084, 1390, 1444, 1567
BccI CCATC 8 cut(s) 71, 79, 241, 624, 700, 712, 811, 1357
BceAI ACGGC 2 cut(s) 1176, 1517
BcgI CGANNNNNNTGC 2 cut(s) 754, 788
BciT130I CCWGG 4 cut(s) 506, 725, 885, 1499
BcoDI GTCTC 2 cut(s) 838, 1038
BfaI CTAG 5 cut(s) 363, 434, 620, 626, 758
BfmI CTRYAG 2 cut(s) 170, 1458
BfoI RGCGCY 2 cut(s) 119, 650
BfuAI ACCTGC 2 cut(s) 199, 1288
BlnI CCTAGG 1 cut(s) 757
BlpI GCTNAGC 1 cut(s) 1374
Bme18I GGWCC 4 cut(s) 313, 502, 1001, 1116
BmeRI GACNNNNNGTC 1 cut(s) 760
BmeT110I CYCGRG 3 cut(s) 103, 546, 1437
BmgT120I GGNCC 6 cut(s) 313, 502, 721, 1001, 1116, 1161
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 3 cut(s) 177, 1203, 1234
BmuI ACTGGG 1 cut(s) 870
BoxI GACNNNNGTC 1 cut(s) 1006
BpiI GAAGAC 2 cut(s) 738, 1655
BplI GAGNNNNNCTC 4 cut(s) 566, 598, 1331, 1363
BpmI CTGGAG 2 cut(s) 1352, 1520
Bpu10I CCTNAGC 1 cut(s) 62
Bpu1102I GCTNAGC 1 cut(s) 1374
BpuEI CTTGAG 5 cut(s) 56, 307, 1415, 1569, 1688
BsaBI GATNNNNATC 2 cut(s) 696, 1263
BsaHI GRCGYC 1 cut(s) 735
BsaI GGTCTC 1 cut(s) 838
BsaWI WCCGGW 7 cut(s) 46, 479, 663, 829, 968, 1045, 1730
BsaXI ACNNNNNCTCC 8 cut(s) 926, 956, 1325, 1355, 1532, 1535, 1562, 1565
Bse118I RCCGGY 5 cut(s) 479, 829, 947, 1712, 1730
Bse1I ACTGG 2 cut(s) 130, 865
Bse3DI GCAATG 2 cut(s) 875, 1563
Bse8I GATNNNNATC 2 cut(s) 696, 1263
BseBI CCWGG 4 cut(s) 506, 725, 885, 1499
BseGI GGATG 8 cut(s) 82, 192, 594, 635, 697, 822, 961, 1645
BseJI GATNNNNATC 2 cut(s) 696, 1263
BseMI GCAATG 2 cut(s) 875, 1563
BseMII CTCAG 1 cut(s) 1401
BseNI ACTGG 2 cut(s) 130, 865
BseRI GAGGAG 3 cut(s) 692, 1289, 1553
BseSI GKGCMC 1 cut(s) 1222
BseX3I CGGCCG 2 cut(s) 949, 1626
BseXI GCAGC 9 cut(s) 105, 144, 484, 772, 787, 1084, 1390, 1444, 1567
BseYI CCCAGC 1 cut(s) 437
BsgI GTGCAG 2 cut(s) 104, 794
Bsh1236I CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
Bsh1285I CGRYCG 3 cut(s) 952, 1153, 1629
BshNI GGYRCC 5 cut(s) 165, 482, 826, 909, 1709
BshTI ACCGGT 3 cut(s) 479, 829, 1730
BsiEI CGRYCG 3 cut(s) 952, 1153, 1629
BsiHKAI GWGCWC 2 cut(s) 1438, 1563
BsiHKCI CYCGRG 3 cut(s) 103, 546, 1437
BslFI GGGAC 4 cut(s) 515, 1014, 1358, 1454
BsmAI GTCTC 2 cut(s) 838, 1038
BsmFI GGGAC 4 cut(s) 515, 1014, 1358, 1454
BsmI GAATGC 2 cut(s) 226, 601
Bso31I GGTCTC 1 cut(s) 838
BsoBI CYCGRG 3 cut(s) 103, 546, 1437
Bsp1286I GDGCHC 3 cut(s) 1222, 1438, 1563
Bsp143I GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
Bsp1720I GCTNAGC 1 cut(s) 1374
BspCNI CTCAG 1 cut(s) 1402
BspFNI CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
BspHI TCATGA 1 cut(s) 1602
BspMAI CTGCAG 1 cut(s) 1462
BspMI ACCTGC 2 cut(s) 199, 1288
BspPI GGATC 5 cut(s) 960, 973, 1512, 1713, 1726
BspT107I GGYRCC 5 cut(s) 165, 482, 826, 909, 1709
BspTNI GGTCTC 1 cut(s) 838
BsrDI GCAATG 2 cut(s) 875, 1563
BsrFI RCCGGY 5 cut(s) 479, 829, 947, 1712, 1730
BsrI ACTGG 2 cut(s) 130, 865
BssAI RCCGGY 5 cut(s) 479, 829, 947, 1712, 1730
BssMI GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
BssNAI GTATAC 1 cut(s) 945
BssNI GRCGYC 1 cut(s) 735
BssSI CACGAG 2 cut(s) 122, 1526
BssT1I CCWWGG 3 cut(s) 139, 757, 1164
Bst1107I GTATAC 1 cut(s) 945
Bst2BI CACGAG 2 cut(s) 122, 1526
Bst2UI CCWGG 4 cut(s) 506, 725, 885, 1499
Bst4CI ACNGT 3 cut(s) 174, 242, 349
Bst6I CTCTTC 5 cut(s) 530, 647, 971, 1229, 1416
BstACI GRCGYC 1 cut(s) 735
BstAPI GCANNNNNTGC 1 cut(s) 1466
BstC8I GCNNGC 4 cut(s) 1161, 1218, 1249, 1739
BstDEI CTNAG 4 cut(s) 62, 1124, 1374, 1410
BstDSI CCRYGG 2 cut(s) 1515, 1533
BstEII GGTNACC 1 cut(s) 211
BstF5I GGATG 8 cut(s) 82, 192, 594, 635, 697, 822, 961, 1645
BstFNI CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
BstH2I RGCGCY 2 cut(s) 119, 650
BstHHI GCGC 3 cut(s) 118, 302, 649
BstKTI GATC 7 cut(s) 18, 902, 968, 994, 1507, 1687, 1721
BstMAI GTCTC 2 cut(s) 838, 1038
BstMBI GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
BstMCI CGRYCG 3 cut(s) 952, 1153, 1629
BstMWI GCNNNNNNNGC 7 cut(s) 98, 157, 631, 1069, 1120, 1244, 1466
BstNI CCWGG 4 cut(s) 506, 725, 885, 1499
BstNSI RCATGY 1 cut(s) 394
BstPAI GACNNNNGTC 1 cut(s) 1006
BstPI GGTNACC 1 cut(s) 211
BstSFI CTRYAG 2 cut(s) 170, 1458
BstSLI GKGCMC 1 cut(s) 1222
BstUI CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
BstV1I GCAGC 9 cut(s) 105, 144, 484, 772, 787, 1084, 1390, 1444, 1567
BstV2I GAAGAC 2 cut(s) 738, 1655
BstX2I RGATCY 2 cut(s) 965, 1718
BstYI RGATCY 2 cut(s) 965, 1718
BstZ17I GTATAC 1 cut(s) 945
BstZI CGGCCG 2 cut(s) 949, 1626
BtgI CCRYGG 2 cut(s) 1515, 1533
BtgZI GCGATG 2 cut(s) 4, 882
BtsCI GGATG 8 cut(s) 82, 192, 594, 635, 697, 822, 961, 1645
BtsIMutI CAGTG 1 cut(s) 858
BveI ACCTGC 2 cut(s) 199, 1288
Cac8I GCNNGC 4 cut(s) 1161, 1218, 1249, 1739
CaiI CAGNNNCTG 1 cut(s) 1466
CciI TCATGA 1 cut(s) 1602
CfoI GCGC 3 cut(s) 118, 302, 649
Cfr10I RCCGGY 5 cut(s) 479, 829, 947, 1712, 1730
Cfr13I GGNCC 6 cut(s) 313, 502, 721, 1001, 1116, 1161
Cfr9I CCCGGG 2 cut(s) 103, 546
CseI GACGC 3 cut(s) 59, 743, 1376
Csp6I GTAC 8 cut(s) 305, 319, 345, 483, 827, 1234, 1543, 1728
CspAI ACCGGT 3 cut(s) 479, 829, 1730
CspCI CAANNNNNGTGG 4 cut(s) 17, 52, 257, 292
CviAII CATG 8 cut(s) 25, 391, 1120, 1210, 1313, 1471, 1476, 1603
CviQI GTAC 8 cut(s) 305, 319, 345, 483, 827, 1234, 1543, 1728
DdeI CTNAG 4 cut(s) 62, 1124, 1374, 1410
DpnI GATC 7 cut(s) 17, 901, 967, 993, 1506, 1686, 1720
DpnII GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
DriI GACNNNNNGTC 1 cut(s) 760
EaeI YGGCCR 4 cut(s) 87, 249, 949, 1626
EagI CGGCCG 2 cut(s) 949, 1626
Eam1104I CTCTTC 5 cut(s) 530, 647, 971, 1229, 1416
Eam1105I GACNNNNNGTC 1 cut(s) 760
EarI CTCTTC 5 cut(s) 530, 647, 971, 1229, 1416
Ecl136II GAGCTC 1 cut(s) 1561
EclXI CGGCCG 2 cut(s) 949, 1626
Eco130I CCWWGG 3 cut(s) 139, 757, 1164
Eco147I AGGCCT 2 cut(s) 67, 509
Eco24I GRGCYC 1 cut(s) 1563
Eco31I GGTCTC 1 cut(s) 838
Eco47I GGWCC 4 cut(s) 313, 502, 1001, 1116
Eco52I CGGCCG 2 cut(s) 949, 1626
Eco53kI GAGCTC 1 cut(s) 1561
Eco57I CTGAAG 2 cut(s) 53, 1154
Eco88I CYCGRG 3 cut(s) 103, 546, 1437
Eco91I GGTNACC 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 1561
EcoO109I RGGNCCY 1 cut(s) 313
EcoO65I GGTNACC 1 cut(s) 211
EcoRI GAATTC 1 cut(s) 293
EcoRII CCWGG 4 cut(s) 504, 723, 883, 1497
EcoT14I CCWWGG 3 cut(s) 139, 757, 1164
EcoT38I GRGCYC 1 cut(s) 1563
ErhI CCWWGG 3 cut(s) 139, 757, 1164
FaeI CATG 8 cut(s) 28, 394, 1123, 1213, 1316, 1474, 1479, 1606
FalI AAGNNNNNCTT 2 cut(s) 723, 755
FaqI GGGAC 4 cut(s) 515, 1014, 1358, 1454
FatI CATG 8 cut(s) 24, 390, 1119, 1209, 1312, 1470, 1475, 1602
FauI CCCGC 4 cut(s) 334, 991, 1152, 1209
FauNDI CATATG 1 cut(s) 254
FblI GTMKAC 2 cut(s) 753, 944
FokI GGATG 8 cut(s) 89, 199, 581, 642, 704, 829, 968, 1652
FriOI GRGCYC 1 cut(s) 1563
FspBI CTAG 5 cut(s) 363, 434, 620, 626, 758
GlaI GCGC 3 cut(s) 117, 301, 648
GsaI CCCAGC 1 cut(s) 441
GsuI CTGGAG 2 cut(s) 1352, 1520
HaeII RGCGCY 2 cut(s) 119, 650
HgaI GACGC 3 cut(s) 59, 743, 1376
HhaI GCGC 3 cut(s) 118, 302, 649
Hin1I GRCGYC 1 cut(s) 735
Hin1II CATG 8 cut(s) 28, 394, 1123, 1213, 1316, 1474, 1479, 1606
Hin6I GCGC 3 cut(s) 116, 300, 647
HinP1I GCGC 3 cut(s) 116, 300, 647
HincII GTYRAC 1 cut(s) 754
HindII GTYRAC 1 cut(s) 754
HinfI GANTC 9 cut(s) 94, 591, 1007, 1186, 1205, 1346, 1383, 1442, 1463
HphI GGTGA 9 cut(s) 192, 223, 361, 734, 899, 949, 1312, 1412, 1438
Hpy166II GTNNAC 4 cut(s) 307, 754, 945, 1234
Hpy188I TCNGA 4 cut(s) 523, 1269, 1411, 1447
Hpy188III TCNNGA 6 cut(s) 799, 1439, 1586, 1603, 1667, 1688
Hpy8I GTNNAC 4 cut(s) 307, 754, 945, 1234
Hpy99I CGWCG 1 cut(s) 1015
HpyCH4III ACNGT 3 cut(s) 174, 242, 349
HpyCH4IV ACGT 1 cut(s) 941
HpyCH4V TGCA 5 cut(s) 28, 121, 775, 1312, 1460
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 157, 631, 1069, 1120, 1244, 1466
HpyF3I CTNAG 4 cut(s) 62, 1124, 1374, 1410
HpySE526I ACGT 1 cut(s) 941
Hsp92I GRCGYC 1 cut(s) 735
Hsp92II CATG 8 cut(s) 28, 394, 1123, 1213, 1316, 1474, 1479, 1606
HspAI GCGC 3 cut(s) 116, 300, 647
KpnI GGTACC 2 cut(s) 486, 830
Kzo9I GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
LmnI GCTCC 5 cut(s) 58, 639, 860, 864, 1390
Lsp1109I GCAGC 9 cut(s) 105, 144, 484, 772, 787, 1084, 1390, 1444, 1567
LweI GCATC 3 cut(s) 177, 1203, 1234
MaeI CTAG 5 cut(s) 363, 434, 620, 626, 758
MaeII ACGT 1 cut(s) 941
MaeIII GTNAC 6 cut(s) 198, 211, 349, 382, 937, 1127
MalI GATC 7 cut(s) 17, 901, 967, 993, 1506, 1686, 1720
MboI GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
MflI RGATCY 2 cut(s) 965, 1718
MhlI GDGCHC 3 cut(s) 1222, 1438, 1563
MlsI TGGCCA 1 cut(s) 251
MluCI AATT 3 cut(s) 293, 453, 1649
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 4 cut(s) 1016, 1340, 1436, 1472
Mox20I TGGCCA 1 cut(s) 251
MroXI GAANNNNTTC 1 cut(s) 131
MscI TGGCCA 1 cut(s) 251
MseI TTAA 2 cut(s) 456, 960
MslI CAYNNNNRTG 5 cut(s) 23, 747, 921, 1269, 1568
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 3 cut(s) 157, 475, 1075
Mva1269I GAATGC 2 cut(s) 226, 601
MvaI CCWGG 4 cut(s) 506, 725, 885, 1499
MvnI CGCG 6 cut(s) 53, 92, 300, 302, 998, 1370
MwoI GCNNNNNNNGC 7 cut(s) 98, 157, 631, 1069, 1120, 1244, 1466
NdeI CATATG 1 cut(s) 254
NdeII GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
NlaIII CATG 8 cut(s) 28, 394, 1123, 1213, 1316, 1474, 1479, 1606
NmeAIII GCCGAG 1 cut(s) 1384
NmuCI GTSAC 5 cut(s) 198, 211, 349, 937, 1127
NspI RCATGY 1 cut(s) 394
OliI CACNNNNGTG 1 cut(s) 921
PagI TCATGA 1 cut(s) 1602
PaqCI CACCTGC 2 cut(s) 199, 1288
PceI AGGCCT 2 cut(s) 67, 509
PctI GAATGC 2 cut(s) 226, 601
PdmI GAANNNNTTC 1 cut(s) 131
PfeI GAWTC 5 cut(s) 94, 591, 1186, 1205, 1383
PflMI CCANNNNNTGG 1 cut(s) 1476
PfoI TCCNGGA 1 cut(s) 1200
PinAI ACCGGT 3 cut(s) 479, 829, 1730
PleI GAGTC 4 cut(s) 1015, 1340, 1436, 1471
PpsI GAGTC 4 cut(s) 1015, 1340, 1436, 1471
PpuMI RGGWCCY 1 cut(s) 313
PshAI GACNNNNGTC 1 cut(s) 1006
Psp124BI GAGCTC 1 cut(s) 1563
Psp5II RGGWCCY 1 cut(s) 313
Psp6I CCWGG 4 cut(s) 504, 723, 883, 1497
PspEI GGTNACC 1 cut(s) 211
PspFI CCCAGC 1 cut(s) 437
PspGI CCWGG 4 cut(s) 504, 723, 883, 1497
PspPI GGNCC 6 cut(s) 313, 502, 721, 1001, 1116, 1161
PspPPI RGGWCCY 1 cut(s) 313
PstI CTGCAG 1 cut(s) 1462
PstNI CAGNNNCTG 1 cut(s) 1466
PsuI RGATCY 2 cut(s) 965, 1718
PvuII CAGCTG 2 cut(s) 475, 1075
RsaI GTAC 8 cut(s) 306, 320, 346, 484, 828, 1235, 1544, 1729
RsaNI GTAC 8 cut(s) 305, 319, 345, 483, 827, 1234, 1543, 1728
RseI CAYNNNNRTG 5 cut(s) 23, 747, 921, 1269, 1568
SacI GAGCTC 1 cut(s) 1563
SalI GTCGAC 1 cut(s) 752
SaqAI TTAA 2 cut(s) 456, 960
Sau3AI GATC 7 cut(s) 15, 899, 965, 991, 1504, 1684, 1718
Sau96I GGNCC 6 cut(s) 313, 502, 721, 1001, 1116, 1161
SchI GAGTC 4 cut(s) 1016, 1340, 1436, 1472
SduI GDGCHC 3 cut(s) 1222, 1438, 1563
SfaNI GCATC 3 cut(s) 177, 1203, 1234
SfcI CTRYAG 2 cut(s) 170, 1458
SinI GGWCC 4 cut(s) 313, 502, 1001, 1116
SmaI CCCGGG 2 cut(s) 105, 548
SmiMI CAYNNNNRTG 5 cut(s) 23, 747, 921, 1269, 1568
SmlI CTYRAG 5 cut(s) 71, 322, 1394, 1584, 1667
SmoI CTYRAG 5 cut(s) 71, 322, 1394, 1584, 1667
Sse9I AATT 3 cut(s) 293, 453, 1649
SseBI AGGCCT 2 cut(s) 67, 509
SspMI CTAG 5 cut(s) 363, 434, 620, 626, 758
SstI GAGCTC 1 cut(s) 1563
StuI AGGCCT 2 cut(s) 67, 509
StyI CCWWGG 3 cut(s) 139, 757, 1164
TaaI ACNGT 3 cut(s) 174, 242, 349
TaiI ACGT 1 cut(s) 944
TaqI TCGA 5 cut(s) 229, 401, 753, 764, 1149
TasI AATT 3 cut(s) 293, 453, 1649
TatI WGTACW 2 cut(s) 318, 1542
TauI GCSGC 5 cut(s) 92, 362, 1373, 1628, 1697
TfiI GAWTC 5 cut(s) 94, 591, 1186, 1205, 1383
Tru1I TTAA 2 cut(s) 456, 960
Tru9I TTAA 2 cut(s) 456, 960
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 5 cut(s) 198, 211, 349, 937, 1127
TseI GCWGC 9 cut(s) 118, 157, 472, 775, 785, 1072, 1378, 1457, 1580
Tsp45I GTSAC 5 cut(s) 198, 211, 349, 937, 1127
TspDTI ATGAA 6 cut(s) 23, 306, 583, 1116, 1619, 1656
TspGWI ACGGA 2 cut(s) 274, 826
TspMI CCCGGG 2 cut(s) 103, 546
TspRI CASTG 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 1476
VpaK11BI GGWCC 4 cut(s) 313, 502, 1001, 1116
XapI RAATTY 2 cut(s) 293, 1649
XceI RCATGY 1 cut(s) 394
XcmI CCANNNNNNNNNTGG 1 cut(s) 1730
XmaI CCCGGG 2 cut(s) 103, 546
XmaJI CCTAGG 1 cut(s) 757
XmiI GTMKAC 2 cut(s) 753, 944
XmnI GAANNNNTTC 1 cut(s) 131
XspI CTAG 5 cut(s) 363, 434, 620, 626, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.