Rmu_sc0028215.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028215.1
OG0000087
Physical Location & Seq
Reverse (-)
2 .. 1756
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0028215.1_g000001.1.cds

Sequence Viewer

Length: 1073 bp
ctgattgcagtgaaagccccgaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccaaggagaagatgctctgcacatcgacgtcgacctagggtcgaaaggcacgagtcggtctattgaagagacccttttggagatcaccgatgagggatacggtgagcctgaccccgacgctcccgtgacccacgccgcgcagccctccatggccgatgtcattacgatagatgacaccggaatgggaaaagtaccggcctcagtgcctatttcctctcgttccactgggagcgatgaggcgttactccccggtgagaagaagagatcccacagtcaccggcatcgaactgataaggaggtgacgtacactggcagggacgtccagggtactggtgcgaagaggcagaagaaagaccacccgggatcagggccgtcgccttctcttggcctgttatctccccccgttccggtaatccccgagaagcccatcaagcagctgctgaatgaatacggggttgccgacgaaaagtttgtgcggtccatgcttggggatctgaaggatattgacctcgaccgggttcgagccaaagataacactccccaggagaatcgccgtctcgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccatcgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaggagcgggactcattgagggctgagatggccgcctctaagcagcggattgcggagcttgagggtgaggttgttgaggcatgggaggaggtaaagaacgcccgggactccgagaaaaaggctacagagtctgccatctcatggaaggagaaggcagaccatctggaggatcgccttcccgcggagaggcacgaggccgtggaggatactgcttctgatccaaaagccatgcagaaaggggtctcgcccgtggcctctgttgtcgtggttctgatagcccacaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

357

Amino Acids

39.31

Weight (kDa)

5.38

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 742
AatII GACGTC 2 cut(s) 123, 414
Acc36I ACCTGC 1 cut(s) 742
AccB7I CCANNNNNTGG 2 cut(s) 76, 930
AccBSI CCGCTC 1 cut(s) 796
AccI GTMKAC 1 cut(s) 123
AccII CGCG 2 cut(s) 230, 971
AciI CCGC 9 cut(s) 228, 568, 670, 796, 822, 835, 842, 969, 971
AclWI GGATC 5 cut(s) 351, 463, 591, 966, 1001
AcoI YGGCCR 2 cut(s) 243, 819
AcuI CTGAAG 2 cut(s) 608, 743
AcyI GRCGYC 3 cut(s) 120, 411, 699
AfaI GTAC 4 cut(s) 285, 398, 421, 689
AgsI TTSAA 2 cut(s) 158, 682
AhdI GACNNNNNGTC 1 cut(s) 130
AjnI CCWGG 2 cut(s) 414, 633
AluBI AGCT 3 cut(s) 529, 784, 847
AluI AGCT 3 cut(s) 529, 784, 847
Alw26I GTCTC 3 cut(s) 155, 653, 1036
AlwI GGATC 5 cut(s) 351, 463, 591, 966, 1001
AlwNI CAGNNNCTG 2 cut(s) 532, 920
Ama87I CYCGRG 4 cut(s) 451, 509, 654, 891
AoxI GGCC 9 cut(s) 91, 243, 288, 461, 478, 777, 819, 984, 1041
ApeKI GCWGC 4 cut(s) 232, 526, 529, 832
ArsI GACNNNNNNTTYG 2 cut(s) 545, 577
AspA2I CCTAGG 1 cut(s) 127
AspLEI GCGC 1 cut(s) 232
AspS9I GGNCC 3 cut(s) 91, 461, 570
AsuHPI GGTGA 7 cut(s) 169, 206, 356, 359, 403, 766, 866
AvaI CYCGRG 4 cut(s) 451, 509, 654, 891
AvaII GGWCC 1 cut(s) 570
AvrII CCTAGG 1 cut(s) 127
BaeGI GKGCMC 1 cut(s) 676
BauI CACGAG 2 cut(s) 142, 980
BbvI GCAGC 4 cut(s) 244, 516, 538, 844
BccI CCATC 8 cut(s) 52, 70, 82, 527, 701, 811, 932, 957
BceAI ACGGC 3 cut(s) 448, 630, 971
BciT130I CCWGG 2 cut(s) 416, 635
BciVI GTATCC 2 cut(s) 182, 988
BcoDI GTCTC 3 cut(s) 155, 653, 1036
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 1 cut(s) 912
BfuAI ACCTGC 1 cut(s) 742
BfuI GTATCC 2 cut(s) 182, 988
BisI GCNGC 6 cut(s) 228, 233, 527, 530, 822, 833
BlnI CCTAGG 1 cut(s) 127
BlsI GCNGC 6 cut(s) 229, 234, 528, 531, 823, 834
Bme18I GGWCC 1 cut(s) 570
BmeRI GACNNNNNGTC 1 cut(s) 130
BmeT110I CYCGRG 4 cut(s) 451, 509, 654, 891
BmgT120I GGNCC 3 cut(s) 91, 461, 570
BmrI ACTGGG 1 cut(s) 327
BmsI GCATC 4 cut(s) 55, 94, 382, 657
BmuI ACTGGG 1 cut(s) 327
BplI GAGNNNNNCTC 2 cut(s) 785, 817
BpmI CTGGAG 2 cut(s) 806, 974
BpuEI CTTGAG 1 cut(s) 869
BsaBI GATNNNNATC 1 cut(s) 717
BsaHI GRCGYC 3 cut(s) 120, 411, 699
BsaI GGTCTC 2 cut(s) 155, 1036
BsaWI WCCGGW 2 cut(s) 269, 499
BsaXI ACNNNNNCTCC 2 cut(s) 380, 410
Bse118I RCCGGY 2 cut(s) 286, 369
Bse1I ACTGG 3 cut(s) 322, 406, 427
Bse8I GATNNNNATC 1 cut(s) 717
BseBI CCWGG 2 cut(s) 416, 635
BseGI GGATG 2 cut(s) 63, 67
BseJI GATNNNNATC 1 cut(s) 717
BseMII CTCAG 2 cut(s) 306, 804
BseNI ACTGG 3 cut(s) 322, 406, 427
BseRI GAGGAG 3 cut(s) 62, 743, 890
BseSI GKGCMC 1 cut(s) 676
BseXI GCAGC 4 cut(s) 244, 516, 538, 844
BsgI GTGCAG 1 cut(s) 95
Bsh1236I CGCG 2 cut(s) 230, 971
Bsh1285I CGRYCG 1 cut(s) 607
BshFI GGCC 9 cut(s) 93, 245, 290, 463, 480, 779, 821, 986, 1043
BsiEI CGRYCG 1 cut(s) 607
BsiHKCI CYCGRG 4 cut(s) 451, 509, 654, 891
BslFI GGGAC 3 cut(s) 422, 812, 908
BsmAI GTCTC 3 cut(s) 155, 653, 1036
BsmBI CGTCTC 1 cut(s) 653
BsmFI GGGAC 3 cut(s) 422, 812, 908
BsnI GGCC 9 cut(s) 93, 245, 290, 463, 480, 779, 821, 986, 1043
Bso31I GGTCTC 2 cut(s) 155, 1036
BsoBI CYCGRG 4 cut(s) 451, 509, 654, 891
Bsp1286I GDGCHC 1 cut(s) 676
Bsp143I GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 9 cut(s) 228, 568, 670, 796, 822, 835, 842, 969, 971
BspANI GGCC 9 cut(s) 93, 245, 290, 463, 480, 779, 821, 986, 1043
BspCNI CTCAG 2 cut(s) 305, 805
BspFNI CGCG 2 cut(s) 230, 971
BspMI ACCTGC 1 cut(s) 742
BspPI GGATC 5 cut(s) 351, 463, 591, 966, 1001
BspTNI GGTCTC 2 cut(s) 155, 1036
BsrBI CCGCTC 1 cut(s) 796
BsrFI RCCGGY 2 cut(s) 286, 369
BsrI ACTGG 3 cut(s) 322, 406, 427
BssAI RCCGGY 2 cut(s) 286, 369
BssMI GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
BssNI GRCGYC 3 cut(s) 120, 411, 699
BssSI CACGAG 2 cut(s) 142, 980
BssT1I CCWWGG 3 cut(s) 94, 127, 240
Bst2BI CACGAG 2 cut(s) 142, 980
Bst2UI CCWGG 2 cut(s) 416, 635
Bst4CI ACNGT 2 cut(s) 194, 365
Bst6I CTCTTC 5 cut(s) 17, 153, 347, 425, 683
BstACI GRCGYC 3 cut(s) 120, 411, 699
BstC8I GCNNGC 2 cut(s) 672, 703
BstDEI CTNAG 3 cut(s) 292, 813, 828
BstDSI CCRYGG 4 cut(s) 240, 969, 987, 1038
BstF5I GGATG 2 cut(s) 63, 67
BstFNI CGCG 2 cut(s) 230, 971
BstHHI GCGC 1 cut(s) 232
BstKTI GATC 6 cut(s) 177, 359, 458, 586, 961, 1009
BstMAI GTCTC 3 cut(s) 155, 653, 1036
BstMBI GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
BstMCI CGRYCG 1 cut(s) 607
BstMWI GCNNNNNNNGC 5 cut(s) 14, 523, 574, 698, 818
BstNI CCWGG 2 cut(s) 416, 635
BstNSI RCATGY 1 cut(s) 85
BstSFI CTRYAG 1 cut(s) 912
BstSLI GKGCMC 1 cut(s) 676
BstUI CGCG 2 cut(s) 230, 971
BstV1I GCAGC 4 cut(s) 244, 516, 538, 844
BstX2I RGATCY 2 cut(s) 356, 583
BstXI CCANNNNNNTGG 1 cut(s) 422
BstYI RGATCY 2 cut(s) 356, 583
BsuI GTATCC 2 cut(s) 182, 988
BsuRI GGCC 9 cut(s) 93, 245, 290, 463, 480, 779, 821, 986, 1043
BtgI CCRYGG 4 cut(s) 240, 969, 987, 1038
BtgZI GCGATG 1 cut(s) 339
BtsCI GGATG 2 cut(s) 63, 67
BtsI GCAGTG 1 cut(s) 15
BtsIMutI CAGTG 4 cut(s) 15, 300, 315, 399
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 2 cut(s) 672, 703
CaiI CAGNNNCTG 2 cut(s) 532, 920
CfoI GCGC 1 cut(s) 232
Cfr10I RCCGGY 2 cut(s) 286, 369
Cfr13I GGNCC 3 cut(s) 91, 461, 570
Cfr42I CCGCGG 1 cut(s) 972
Cfr9I CCCGGG 3 cut(s) 451, 654, 891
CseI GACGC 2 cut(s) 218, 707
Csp6I GTAC 4 cut(s) 284, 397, 420, 688
CviAII CATG 7 cut(s) 82, 241, 574, 767, 870, 930, 1018
CviQI GTAC 4 cut(s) 284, 397, 420, 688
DdeI CTNAG 3 cut(s) 292, 813, 828
DpnI GATC 6 cut(s) 176, 358, 457, 585, 960, 1008
DpnII GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
DriI GACNNNNNGTC 1 cut(s) 130
EaeI YGGCCR 2 cut(s) 243, 819
Eam1104I CTCTTC 5 cut(s) 17, 153, 347, 425, 683
Eam1105I GACNNNNNGTC 1 cut(s) 130
EarI CTCTTC 5 cut(s) 17, 153, 347, 425, 683
Eco130I CCWWGG 3 cut(s) 94, 127, 240
Eco31I GGTCTC 2 cut(s) 155, 1036
Eco47I GGWCC 1 cut(s) 570
Eco57I CTGAAG 2 cut(s) 608, 743
Eco88I CYCGRG 4 cut(s) 451, 509, 654, 891
EcoRII CCWGG 2 cut(s) 414, 633
EcoT14I CCWWGG 3 cut(s) 94, 127, 240
ErhI CCWWGG 3 cut(s) 94, 127, 240
Esp3I CGTCTC 1 cut(s) 653
FaeI CATG 7 cut(s) 85, 244, 577, 770, 873, 933, 1021
FaiI YATR 7 cut(s) 83, 242, 575, 768, 871, 931, 1019
FalI AAGNNNNNCTT 2 cut(s) 150, 182
FaqI GGGAC 3 cut(s) 422, 812, 908
FatI CATG 7 cut(s) 81, 240, 573, 766, 869, 929, 1017
FauI CCCGC 3 cut(s) 663, 789, 976
FblI GTMKAC 1 cut(s) 123
Fnu4HI GCNGC 6 cut(s) 228, 233, 527, 530, 822, 833
FokI GGATG 2 cut(s) 70, 74
Fsp4HI GCNGC 6 cut(s) 228, 233, 527, 530, 822, 833
FspBI CTAG 1 cut(s) 128
GlaI GCGC 1 cut(s) 231
GluI GCNGC 6 cut(s) 228, 233, 527, 530, 822, 833
GsuI CTGGAG 2 cut(s) 806, 974
HaeIII GGCC 9 cut(s) 93, 245, 290, 463, 480, 779, 821, 986, 1043
HgaI GACGC 2 cut(s) 218, 707
HhaI GCGC 1 cut(s) 232
Hin1I GRCGYC 3 cut(s) 120, 411, 699
Hin1II CATG 7 cut(s) 85, 244, 577, 770, 873, 933, 1021
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HinfI GANTC 6 cut(s) 145, 640, 659, 800, 896, 917
HphI GGTGA 7 cut(s) 169, 206, 356, 359, 403, 766, 866
Hpy166II GTNNAC 3 cut(s) 124, 399, 688
Hpy188I TCNGA 5 cut(s) 588, 723, 901, 1006, 1062
Hpy188III TCNNGA 1 cut(s) 953
Hpy8I GTNNAC 3 cut(s) 124, 399, 688
Hpy99I CGWCG 6 cut(s) 122, 125, 212, 469, 557, 701
HpyAV CCTTC 8 cut(s) 480, 583, 718, 769, 784, 928, 934, 974
HpyCH4III ACNGT 2 cut(s) 194, 365
HpyCH4IV ACGT 3 cut(s) 120, 395, 411
HpyCH4V TGCA 3 cut(s) 8, 112, 1021
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 523, 574, 698, 818
HpyF3I CTNAG 3 cut(s) 292, 813, 828
HpySE526I ACGT 3 cut(s) 120, 395, 411
Hsp92I GRCGYC 3 cut(s) 120, 411, 699
Hsp92II CATG 7 cut(s) 85, 244, 577, 770, 873, 933, 1021
HspAI GCGC 1 cut(s) 230
KspI CCGCGG 1 cut(s) 972
Kzo9I GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
LmnI GCTCC 4 cut(s) 217, 321, 793, 844
Lsp1109I GCAGC 4 cut(s) 244, 516, 538, 844
LweI GCATC 4 cut(s) 55, 94, 382, 657
MaeI CTAG 1 cut(s) 128
MaeII ACGT 3 cut(s) 120, 395, 411
MaeIII GTNAC 4 cut(s) 217, 333, 365, 391
MalI GATC 6 cut(s) 176, 358, 457, 585, 960, 1008
MbiI CCGCTC 1 cut(s) 796
MboI GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
MflI RGATCY 2 cut(s) 356, 583
MhlI GDGCHC 1 cut(s) 676
MlyI GAGTC 4 cut(s) 154, 794, 890, 926
MslI CAYNNNNRTG 2 cut(s) 86, 272
MspA1I CMGCKG 3 cut(s) 529, 835, 971
MvaI CCWGG 2 cut(s) 416, 635
MvnI CGCG 2 cut(s) 230, 971
MwoI GCNNNNNNNGC 5 cut(s) 14, 523, 574, 698, 818
NcoI CCATGG 1 cut(s) 240
NdeII GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
NlaIII CATG 7 cut(s) 85, 244, 577, 770, 873, 933, 1021
NmuCI GTSAC 3 cut(s) 217, 365, 391
NspI RCATGY 1 cut(s) 85
PaqCI CACCTGC 1 cut(s) 742
PcsI WCGNNNNNNNCGW 3 cut(s) 140, 549, 702
PfeI GAWTC 2 cut(s) 640, 659
PflMI CCANNNNNTGG 2 cut(s) 76, 930
PkrI GCNGC 6 cut(s) 229, 234, 528, 531, 823, 834
PleI GAGTC 4 cut(s) 153, 794, 890, 925
PpsI GAGTC 4 cut(s) 153, 794, 890, 925
Psp6I CCWGG 2 cut(s) 414, 633
PspGI CCWGG 2 cut(s) 414, 633
PspPI GGNCC 3 cut(s) 91, 461, 570
PstNI CAGNNNCTG 2 cut(s) 532, 920
PsuI RGATCY 2 cut(s) 356, 583
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 4 cut(s) 285, 398, 421, 689
RsaNI GTAC 4 cut(s) 284, 397, 420, 688
RseI CAYNNNNRTG 2 cut(s) 86, 272
SacII CCGCGG 1 cut(s) 972
SalI GTCGAC 1 cut(s) 122
SatI GCNGC 6 cut(s) 228, 233, 527, 530, 822, 833
Sau3AI GATC 6 cut(s) 174, 356, 455, 583, 958, 1006
Sau96I GGNCC 3 cut(s) 91, 461, 570
SchI GAGTC 4 cut(s) 154, 794, 890, 926
SduI GDGCHC 1 cut(s) 676
SfaNI GCATC 4 cut(s) 55, 94, 382, 657
SfcI CTRYAG 1 cut(s) 912
Sfr303I CCGCGG 1 cut(s) 972
SgrBI CCGCGG 1 cut(s) 972
SinI GGWCC 1 cut(s) 570
SmaI CCCGGG 3 cut(s) 453, 656, 893
SmiMI CAYNNNNRTG 2 cut(s) 86, 272
SmlI CTYRAG 1 cut(s) 848
SmoI CTYRAG 1 cut(s) 848
SsiI CCGC 9 cut(s) 228, 568, 670, 796, 822, 835, 842, 969, 971
SspMI CTAG 1 cut(s) 128
StyI CCWWGG 3 cut(s) 94, 127, 240
TaaI ACNGT 2 cut(s) 194, 365
TaiI ACGT 3 cut(s) 123, 398, 414
TaqI TCGA 7 cut(s) 117, 123, 134, 376, 603, 613, 696
TaqII GACCGA 1 cut(s) 138
TauI GCSGC 2 cut(s) 230, 824
TfiI GAWTC 2 cut(s) 640, 659
TscAI CASTG 4 cut(s) 15, 300, 322, 406
TseFI GTSAC 3 cut(s) 217, 365, 391
TseI GCWGC 4 cut(s) 232, 526, 529, 832
Tsp45I GTSAC 3 cut(s) 217, 365, 391
TspDTI ATGAA 2 cut(s) 552, 755
TspMI CCCGGG 3 cut(s) 451, 654, 891
TspRI CASTG 4 cut(s) 15, 300, 322, 406
Van91I CCANNNNNTGG 2 cut(s) 76, 930
VpaK11BI GGWCC 1 cut(s) 570
XceI RCATGY 1 cut(s) 85
XmaI CCCGGG 3 cut(s) 451, 654, 891
XmaJI CCTAGG 1 cut(s) 127
XmiI GTMKAC 1 cut(s) 123
XspI CTAG 1 cut(s) 128
ZraI GACGTC 2 cut(s) 121, 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.