Rmu_sc0000883.1_g000019

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000883.1
OG0000087
Physical Location & Seq
Reverse (-)
81676 .. 83550
1875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000883.1_g000019.1.cds

Sequence Viewer

Length: 1464 bp
atgaggcaagcggaagcggatatcgaccggtacttggagcgaagtagaacagagaaggaattagcagagaataccgaatcctcgactggggtgttctcggagagtagagaggagactgacgaaggtgagagcgaggatggatctgcggaggcgccggtagtcacagtggctattcccaagggcatcccgaaacctaggtacaccttagtagacgggactgtatgcgacgaactcgggagaagtatgactatgaaggagatcatcgccatgagattgaagtggggaataccggacgaggtagagcttaggcctctcaaggctggagagatggctgtgaatcttcccccgggatgggtggcgctgcacgagaaccagctccaccaagggctatcactaccgatgccccggaagcaatcgtgtataggtaccgtgacgtttgccgccagggactacgagcccttagttaccgatatgcctacctcaatgagcaaaaggtggaggaataaagtatttcttgctggaaggcggtggcaaattaagaataagaagtggcacctgatcggtactttccaagctattggggaccaggcctattcattatccaagttggaaaggaaaaggatagcctgggtatacgttgtttggagtaagcaggagagaagctcttataggttcatccggtactccatacttgataggctagggctagggagactccccgtgaaagcgccgaaaaggaagccccggaaaggtaaggaggacgatagaatggacgacaaccaattgatggacatgttgatgagccagggagaagacgcccttcacattgaagtcgacctggagtcgaaggctacgggtcgctccattgaagaaaccctactagagatcactgatggaggatacggggagcctgactctgatgctcccatgacccaagtcgggcagccttctgcggggaatgttgtcaccatagctgatcccggaagggaaaagttaccgtctctggaagtgaactataccggccaggatgtcaaagaatctgtggcgaagaggcagaacaaaaatcatccgggatcagagttgccactctcacttggcatgttgtctcctgccataccggtaatccccaagaagcccattaaacaactgttgagcgagtacggggttgctgatgaaaattttgtgcggtccatactcgccgacctgaaggatatagacctcgatcgggtgcgggccagagacaatacccctcaagagaatcgtcgccttgctcgggagtcaatgatgcgggcacttttcaatgtgtacgcgattgatgccagcgaggaagatacgcacctgaaggaggaggttagcagtctctccaggcaggtgaagtatctgcatggggagaaggccaagctggagaaggagcgggactccttgaaagagaagattaagtccttgactccgaaggttacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

487

Amino Acids

55.03

Weight (kDa)

6.47

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1360
Acc36I ACCTGC 1 cut(s) 1360
Acc65I GGTACC 1 cut(s) 425
AccB1I GGYRCC 3 cut(s) 151, 425, 552
AccB7I CCANNNNNTGG 1 cut(s) 787
AccBSI CCGCTC 1 cut(s) 1414
AccI GTMKAC 3 cut(s) 210, 633, 834
AccII CGCG 1 cut(s) 1310
AclWI GGATC 3 cut(s) 148, 971, 1081
AcoI YGGCCR 1 cut(s) 1021
AcsI RAATTY 1 cut(s) 1177
AcuI CTGAAG 2 cut(s) 1226, 1361
AcyI GRCGYC 2 cut(s) 152, 816
AfaI GTAC 7 cut(s) 32, 200, 427, 565, 683, 1160, 1307
AflIII ACRYGT 1 cut(s) 792
AgeI ACCGGT 2 cut(s) 27, 1117
AgsI TTSAA 5 cut(s) 277, 830, 869, 1300, 1426
AhdI GACNNNNNGTC 1 cut(s) 841
AjnI CCWGG 7 cut(s) 443, 585, 626, 804, 837, 1023, 1364
AluBI AGCT 6 cut(s) 304, 376, 575, 663, 974, 1402
AluI AGCT 6 cut(s) 304, 376, 575, 663, 974, 1402
Alw26I GTCTC 6 cut(s) 107, 706, 1005, 1110, 1233, 1364
AlwI GGATC 3 cut(s) 148, 971, 1081
Ama87I CYCGRG 3 cut(s) 233, 346, 1272
AoxI GGCC 5 cut(s) 308, 588, 1021, 1233, 1395
ApeKI GCWGC 2 cut(s) 361, 943
ApoI RAATTY 1 cut(s) 1177
AsiGI ACCGGT 2 cut(s) 27, 1117
Asp718I GGTACC 1 cut(s) 425
AspA2I CCTAGG 1 cut(s) 194
AspLEI GCGC 3 cut(s) 154, 361, 730
AspS9I GGNCC 3 cut(s) 583, 1188, 1233
AsuC2I CCSGG 6 cut(s) 347, 348, 406, 745, 981, 1071
AsuHPI GGTGA 3 cut(s) 137, 958, 1384
AvaI CYCGRG 3 cut(s) 233, 346, 1272
AvaII GGWCC 2 cut(s) 583, 1188
AvrII CCTAGG 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 1294
BanI GGYRCC 3 cut(s) 151, 425, 552
BanII GRGCYC 1 cut(s) 459
BarI GAAGNNNNNNTAC 2 cut(s) 861, 893
BauI CACGAG 1 cut(s) 365
BbsI GAAGAC 1 cut(s) 819
BbvI GCAGC 2 cut(s) 348, 955
BccI CCATC 5 cut(s) 131, 322, 345, 781, 887
BciT130I CCWGG 7 cut(s) 445, 587, 628, 806, 839, 1025, 1366
BciVI GTATCC 1 cut(s) 893
BcnI CCSGG 6 cut(s) 347, 348, 406, 745, 981, 1071
BcoDI GTCTC 6 cut(s) 107, 706, 1005, 1110, 1233, 1364
BfaI CTAG 5 cut(s) 195, 701, 707, 881, 1462
BfoI RGCGCY 3 cut(s) 155, 362, 731
BfuAI ACCTGC 1 cut(s) 1360
BfuI GTATCC 1 cut(s) 893
BisI GCNGC 3 cut(s) 362, 441, 944
BlnI CCTAGG 1 cut(s) 194
BlsI GCNGC 3 cut(s) 363, 442, 945
Bme18I GGWCC 2 cut(s) 583, 1188
BmeRI GACNNNNNGTC 1 cut(s) 841
BmeT110I CYCGRG 3 cut(s) 233, 346, 1272
BmgT120I GGNCC 3 cut(s) 583, 1188, 1233
BmiI GGNNCC 5 cut(s) 153, 427, 554, 584, 909
BmrI ACTGGG 1 cut(s) 96
BmsI GCATC 5 cut(s) 192, 390, 910, 1275, 1306
BmuI ACTGGG 1 cut(s) 96
BoxI GACNNNNGTC 1 cut(s) 935
BpiI GAAGAC 1 cut(s) 819
BplI GAGNNNNNCTC 6 cut(s) 647, 679, 899, 931, 1403, 1435
BpmI CTGGAG 4 cut(s) 342, 860, 1348, 1424
Bpu10I CCTNAGC 1 cut(s) 305
BpuEI CTTGAG 2 cut(s) 299, 1236
BpuMI CCSGG 6 cut(s) 347, 348, 406, 745, 981, 1071
BsaHI GRCGYC 2 cut(s) 152, 816
BsaWI WCCGGW 4 cut(s) 27, 289, 678, 1117
Bse118I RCCGGY 4 cut(s) 27, 154, 1019, 1117
Bse1I ACTGG 1 cut(s) 91
BseBI CCWGG 7 cut(s) 445, 587, 628, 806, 839, 1025, 1366
BseGI GGATG 6 cut(s) 142, 183, 356, 675, 1033, 1066
BseNI ACTGG 1 cut(s) 91
BseRI GAGGAG 2 cut(s) 125, 1361
BseSI GKGCMC 1 cut(s) 1294
BseXI GCAGC 2 cut(s) 348, 955
BsgI GTGCAG 1 cut(s) 347
Bsh1236I CGCG 1 cut(s) 1310
Bsh1285I CGRYCG 2 cut(s) 28, 1225
BshFI GGCC 5 cut(s) 310, 590, 1023, 1235, 1397
BshNI GGYRCC 3 cut(s) 151, 425, 552
BshTI ACCGGT 2 cut(s) 27, 1117
BsiEI CGRYCG 2 cut(s) 28, 1225
BsiHKCI CYCGRG 3 cut(s) 233, 346, 1272
BslFI GGGAC 4 cut(s) 229, 461, 596, 1430
BsmAI GTCTC 6 cut(s) 107, 706, 1005, 1110, 1233, 1364
BsmBI CGTCTC 1 cut(s) 1005
BsmFI GGGAC 4 cut(s) 229, 461, 596, 1430
BsnI GGCC 5 cut(s) 310, 590, 1023, 1235, 1397
BsoBI CYCGRG 3 cut(s) 233, 346, 1272
Bsp1286I GDGCHC 2 cut(s) 459, 1294
Bsp143I GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
BspANI GGCC 5 cut(s) 310, 590, 1023, 1235, 1397
BspFNI CGCG 1 cut(s) 1310
BspLI GGNNCC 5 cut(s) 153, 427, 554, 584, 909
BspMI ACCTGC 1 cut(s) 1360
BspPI GGATC 3 cut(s) 148, 971, 1081
BspT107I GGYRCC 3 cut(s) 151, 425, 552
BsrBI CCGCTC 1 cut(s) 1414
BsrFI RCCGGY 4 cut(s) 27, 154, 1019, 1117
BsrI ACTGG 1 cut(s) 91
BssAI RCCGGY 4 cut(s) 27, 154, 1019, 1117
BssMI GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
BssNAI GTATAC 1 cut(s) 634
BssNI GRCGYC 2 cut(s) 152, 816
BssSI CACGAG 1 cut(s) 365
BssT1I CCWWGG 3 cut(s) 177, 194, 382
Bst1107I GTATAC 1 cut(s) 634
Bst2BI CACGAG 1 cut(s) 365
Bst2UI CCWGG 7 cut(s) 445, 587, 628, 806, 839, 1025, 1366
Bst4CI ACNGT 5 cut(s) 166, 220, 430, 999, 1149
Bst6I CTCTTC 1 cut(s) 1043
BstACI GRCGYC 2 cut(s) 152, 816
BstC8I GCNNGC 4 cut(s) 9, 1233, 1290, 1321
BstDEI CTNAG 3 cut(s) 205, 305, 460
BstEII GGTNACC 1 cut(s) 1456
BstENI CCTNNNNNAGG 1 cut(s) 1343
BstF5I GGATG 6 cut(s) 142, 183, 356, 675, 1033, 1066
BstFNI CGCG 1 cut(s) 1310
BstH2I RGCGCY 3 cut(s) 155, 362, 731
BstHHI GCGC 3 cut(s) 154, 361, 730
BstKTI GATC 7 cut(s) 143, 261, 561, 888, 979, 1076, 1225
BstMAI GTCTC 6 cut(s) 107, 706, 1005, 1110, 1233, 1364
BstMBI GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
BstMCI CGRYCG 2 cut(s) 28, 1225
BstMWI GCNNNNNNNGC 2 cut(s) 409, 1316
BstNI CCWGG 7 cut(s) 445, 587, 628, 806, 839, 1025, 1366
BstNSI RCATGY 2 cut(s) 796, 1102
BstPAI GACNNNNGTC 1 cut(s) 935
BstPI GGTNACC 1 cut(s) 1456
BstSLI GKGCMC 1 cut(s) 1294
BstUI CGCG 1 cut(s) 1310
BstV1I GCAGC 2 cut(s) 348, 955
BstV2I GAAGAC 1 cut(s) 819
BstX2I RGATCY 1 cut(s) 140
BstXI CCANNNNNNTGG 1 cut(s) 578
BstYI RGATCY 1 cut(s) 140
BstZ17I GTATAC 1 cut(s) 634
BsuI GTATCC 1 cut(s) 893
BsuRI GGCC 5 cut(s) 310, 590, 1023, 1235, 1397
BtgZI GCGATG 1 cut(s) 247
BtsCI GGATG 6 cut(s) 142, 183, 356, 675, 1033, 1066
BtsIMutI CAGTG 2 cut(s) 171, 888
BveI ACCTGC 1 cut(s) 1360
Cac8I GCNNGC 4 cut(s) 9, 1233, 1290, 1321
CfoI GCGC 3 cut(s) 154, 361, 730
Cfr10I RCCGGY 4 cut(s) 27, 154, 1019, 1117
Cfr13I GGNCC 3 cut(s) 583, 1188, 1233
Cfr9I CCCGGG 1 cut(s) 346
CseI GACGC 1 cut(s) 824
Csp6I GTAC 7 cut(s) 31, 199, 426, 564, 682, 1159, 1306
CspAI ACCGGT 2 cut(s) 27, 1117
CviAII CATG 5 cut(s) 268, 793, 928, 1099, 1385
CviQI GTAC 7 cut(s) 31, 199, 426, 564, 682, 1159, 1306
DdeI CTNAG 3 cut(s) 205, 305, 460
DinI GGCGCC 1 cut(s) 153
DpnI GATC 7 cut(s) 142, 260, 560, 887, 978, 1075, 1224
DpnII GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
DriI GACNNNNNGTC 1 cut(s) 841
EaeI YGGCCR 1 cut(s) 1021
Eam1104I CTCTTC 1 cut(s) 1043
Eam1105I GACNNNNNGTC 1 cut(s) 841
EarI CTCTTC 1 cut(s) 1043
Eco130I CCWWGG 3 cut(s) 177, 194, 382
Eco147I AGGCCT 2 cut(s) 310, 590
Eco24I GRGCYC 1 cut(s) 459
Eco32I GATATC 1 cut(s) 22
Eco47I GGWCC 2 cut(s) 583, 1188
Eco57I CTGAAG 2 cut(s) 1226, 1361
Eco88I CYCGRG 3 cut(s) 233, 346, 1272
Eco91I GGTNACC 1 cut(s) 1456
EcoNI CCTNNNNNAGG 1 cut(s) 1343
EcoO65I GGTNACC 1 cut(s) 1456
EcoRII CCWGG 7 cut(s) 443, 585, 626, 804, 837, 1023, 1364
EcoRV GATATC 1 cut(s) 22
EcoT14I CCWWGG 3 cut(s) 177, 194, 382
EcoT38I GRGCYC 1 cut(s) 459
EgeI GGCGCC 1 cut(s) 153
EheI GGCGCC 1 cut(s) 153
ErhI CCWWGG 3 cut(s) 177, 194, 382
Esp3I CGTCTC 1 cut(s) 1005
FaeI CATG 5 cut(s) 271, 796, 931, 1102, 1388
FalI AAGNNNNNCTT 4 cut(s) 498, 530, 804, 836
FaqI GGGAC 4 cut(s) 229, 461, 596, 1430
FatI CATG 5 cut(s) 267, 792, 927, 1098, 1384
FauI CCCGC 4 cut(s) 946, 1224, 1281, 1407
FblI GTMKAC 3 cut(s) 210, 633, 834
Fnu4HI GCNGC 3 cut(s) 362, 441, 944
FokI GGATG 6 cut(s) 149, 170, 363, 662, 1040, 1053
FriOI GRGCYC 1 cut(s) 459
Fsp4HI GCNGC 3 cut(s) 362, 441, 944
FspBI CTAG 5 cut(s) 195, 701, 707, 881, 1462
GlaI GCGC 3 cut(s) 153, 360, 729
GluI GCNGC 3 cut(s) 362, 441, 944
GsuI CTGGAG 4 cut(s) 342, 860, 1348, 1424
HaeII RGCGCY 3 cut(s) 155, 362, 731
HaeIII GGCC 5 cut(s) 310, 590, 1023, 1235, 1397
HgaI GACGC 1 cut(s) 824
HhaI GCGC 3 cut(s) 154, 361, 730
Hin1I GRCGYC 2 cut(s) 152, 816
Hin1II CATG 5 cut(s) 271, 796, 931, 1102, 1388
Hin6I GCGC 3 cut(s) 152, 359, 728
HinP1I GCGC 3 cut(s) 152, 359, 728
HincII GTYRAC 1 cut(s) 835
HindII GTYRAC 1 cut(s) 835
HphI GGTGA 3 cut(s) 137, 958, 1384
Hpy166II GTNNAC 6 cut(s) 201, 211, 634, 835, 1012, 1306
Hpy188I TCNGA 4 cut(s) 100, 919, 1078, 1452
Hpy188III TCNNGA 5 cut(s) 187, 235, 1004, 1253, 1274
Hpy8I GTNNAC 6 cut(s) 201, 211, 634, 835, 1012, 1306
Hpy99I CGWCG 2 cut(s) 230, 1266
HpyCH4III ACNGT 5 cut(s) 166, 220, 430, 999, 1149
HpyCH4IV ACGT 2 cut(s) 434, 636
HpyCH4V TGCA 2 cut(s) 364, 1384
HpyF10VI GCNNNNNNNGC 2 cut(s) 409, 1316
HpyF3I CTNAG 3 cut(s) 205, 305, 460
HpySE526I ACGT 2 cut(s) 434, 636
Hsp92I GRCGYC 2 cut(s) 152, 816
Hsp92II CATG 5 cut(s) 271, 796, 931, 1102, 1388
HspAI GCGC 3 cut(s) 152, 359, 728
KasI GGCGCC 1 cut(s) 151
KpnI GGTACC 1 cut(s) 429
Kzo9I GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
LmnI GCTCC 6 cut(s) 37, 381, 866, 907, 928, 1411
Lsp1109I GCAGC 2 cut(s) 348, 955
LweI GCATC 5 cut(s) 192, 390, 910, 1275, 1306
MaeI CTAG 5 cut(s) 195, 701, 707, 881, 1462
MaeII ACGT 2 cut(s) 434, 636
MaeIII GTNAC 6 cut(s) 160, 430, 463, 964, 993, 1456
MalI GATC 7 cut(s) 142, 260, 560, 887, 978, 1075, 1224
MbiI CCGCTC 1 cut(s) 1414
MboI GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
MboII GAAGA 6 cut(s) 332, 824, 881, 1060, 1340, 1444
MfeI CAATTG 1 cut(s) 782
MflI RGATCY 1 cut(s) 140
MhlI GDGCHC 2 cut(s) 459, 1294
MluCI AATT 4 cut(s) 59, 534, 782, 1177
Mly113I GGCGCC 1 cut(s) 152
MlyI GAGTC 6 cut(s) 708, 851, 908, 1286, 1412, 1441
MmeI TCCRAC 1 cut(s) 588
MseI TTAA 3 cut(s) 537, 1140, 1437
MslI CAYNNNNRTG 2 cut(s) 266, 797
MunI CAATTG 1 cut(s) 782
MvaI CCWGG 7 cut(s) 445, 587, 628, 806, 839, 1025, 1366
MvnI CGCG 1 cut(s) 1310
MwoI GCNNNNNNNGC 2 cut(s) 409, 1316
NarI GGCGCC 1 cut(s) 152
NciI CCSGG 6 cut(s) 347, 348, 406, 745, 981, 1071
NdeII GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
NlaIII CATG 5 cut(s) 271, 796, 931, 1102, 1388
NlaIV GGNNCC 5 cut(s) 153, 427, 554, 584, 909
NmuCI GTSAC 3 cut(s) 160, 430, 964
NspI RCATGY 2 cut(s) 796, 1102
PaqCI CACCTGC 1 cut(s) 1360
PceI AGGCCT 2 cut(s) 310, 590
PciI ACATGT 1 cut(s) 792
PfeI GAWTC 4 cut(s) 77, 337, 1037, 1258
PflMI CCANNNNNTGG 1 cut(s) 787
PfoI TCCNGGA 2 cut(s) 979, 1069
PinAI ACCGGT 2 cut(s) 27, 1117
PkrI GCNGC 3 cut(s) 363, 442, 945
Ple19I CGATCG 1 cut(s) 1225
PleI GAGTC 6 cut(s) 708, 850, 908, 1285, 1412, 1441
PluTI GGCGCC 1 cut(s) 155
PpsI GAGTC 6 cut(s) 708, 850, 908, 1285, 1412, 1441
PscI ACATGT 1 cut(s) 792
PshAI GACNNNNGTC 1 cut(s) 935
Psp6I CCWGG 7 cut(s) 443, 585, 626, 804, 837, 1023, 1364
PspEI GGTNACC 1 cut(s) 1456
PspGI CCWGG 7 cut(s) 443, 585, 626, 804, 837, 1023, 1364
PspN4I GGNNCC 5 cut(s) 153, 427, 554, 584, 909
PspPI GGNCC 3 cut(s) 583, 1188, 1233
PsuI RGATCY 1 cut(s) 140
PvuI CGATCG 1 cut(s) 1225
RsaI GTAC 7 cut(s) 32, 200, 427, 565, 683, 1160, 1307
RsaNI GTAC 7 cut(s) 31, 199, 426, 564, 682, 1159, 1306
RseI CAYNNNNRTG 2 cut(s) 266, 797
SalI GTCGAC 1 cut(s) 833
SaqAI TTAA 3 cut(s) 537, 1140, 1437
SatI GCNGC 3 cut(s) 362, 441, 944
Sau3AI GATC 7 cut(s) 140, 258, 558, 885, 976, 1073, 1222
Sau96I GGNCC 3 cut(s) 583, 1188, 1233
SchI GAGTC 6 cut(s) 708, 851, 908, 1286, 1412, 1441
SduI GDGCHC 2 cut(s) 459, 1294
SfaNI GCATC 5 cut(s) 192, 390, 910, 1275, 1306
SfoI GGCGCC 1 cut(s) 153
SinI GGWCC 2 cut(s) 583, 1188
SmaI CCCGGG 1 cut(s) 348
SmiMI CAYNNNNRTG 2 cut(s) 266, 797
SmlI CTYRAG 2 cut(s) 314, 1251
SmoI CTYRAG 2 cut(s) 314, 1251
Sse9I AATT 4 cut(s) 59, 534, 782, 1177
SseBI AGGCCT 2 cut(s) 310, 590
SspDI GGCGCC 1 cut(s) 151
SspMI CTAG 5 cut(s) 195, 701, 707, 881, 1462
StuI AGGCCT 2 cut(s) 310, 590
StyI CCWWGG 3 cut(s) 177, 194, 382
TaaI ACNGT 5 cut(s) 166, 220, 430, 999, 1149
TaiI ACGT 2 cut(s) 437, 639
TaqI TCGA 5 cut(s) 24, 83, 834, 845, 1221
TasI AATT 4 cut(s) 59, 534, 782, 1177
TauI GCSGC 1 cut(s) 443
TfiI GAWTC 4 cut(s) 77, 337, 1037, 1258
Tru1I TTAA 3 cut(s) 537, 1140, 1437
Tru9I TTAA 3 cut(s) 537, 1140, 1437
TscAI CASTG 2 cut(s) 171, 895
TseFI GTSAC 3 cut(s) 160, 430, 964
TseI GCWGC 2 cut(s) 361, 943
Tsp45I GTSAC 3 cut(s) 160, 430, 964
TspDTI ATGAA 4 cut(s) 266, 585, 664, 1188
TspMI CCCGGG 1 cut(s) 346
TspRI CASTG 2 cut(s) 171, 895
Van91I CCANNNNNTGG 1 cut(s) 787
VpaK11BI GGWCC 2 cut(s) 583, 1188
XagI CCTNNNNNAGG 1 cut(s) 1343
XapI RAATTY 1 cut(s) 1177
XceI RCATGY 2 cut(s) 796, 1102
XmaI CCCGGG 1 cut(s) 346
XmaJI CCTAGG 1 cut(s) 194
XmiI GTMKAC 3 cut(s) 210, 633, 834
XspI CTAG 5 cut(s) 195, 701, 707, 881, 1462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.