Rmu_sc0032552.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032552.1
OG0000087
Physical Location & Seq
Forward (+)
1 .. 1643
1643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032552.1_g000001.1.cds

Sequence Viewer

Length: 1118 bp
tgaaagtgccgaagagaaaaccccgaaaaggtgaggaggacgataagatgaatgacaaccagctgatggatatgcttatgagccaaggggaagacgcctttcacattgacgttgacttggcgtcgaaggcaatgatttgctccatcaaggaatttcttctcgagattacagaagactggtacgggaaccctgatcctaaagcccccgttacccagagtgagaagcctcttgccggggacatagttaccgttgtcgatcccgatagacgaaaggcaccaaaatccggctctctctgttacaggtctgccgggtcagctggaagtgaggaagtcttgcttcctagtgagaagaagaggttccataggcaccaccatcagagtgggaacaaggaagaggtcacctacactagtcgggacgttaaagggactgaacctaagaggcagaagaaaagtcatctgataccagaactgtcaccgacactttcgctgttgtctccggccataccagtggtccccaagaagcccatcaagcagctactgagagagtatggggttgctgatgagaggttcgtgcgttcgatgcttgcagatctaaaagatatagacctcgaccgggtactggcgaaggataactccccccaagaaaattgtcgtatgatgcgggcactgttcaacgtgtacgctatcgactctagtgaggaagatactcacttgaaggaagaggttagcaatctctctgggcaagtgaagtatcttcatggggagaagtcaaagctagagaaagagcgggactctttgaaaaggaaggtggagtccttaactcccaaggtggtcgagctggaggcggcggaaaagaagatcgcggagtatgagggtgaactgtttggggcaagggatgagttgggaagtgcccgggactccgtgagagaagttgaagagtctgccaagtcatggaagacgaaagcaaggcttctggatgagcatcttccaatcaaaaggcaggaggttgtgaccgagtacaaaggctcccaagagcttgttgatatgctgcttgtcactcaggacaaggccgtgattatgaagttcaaaagaatgagtggccactggatacctggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

371

Amino Acids

42.13

Weight (kDa)

6.63

Isoelectric Point (pI)

43.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 273, 365
AccB7I CCANNNNNTGG 2 cut(s) 66, 950
AccBSI CCGCTC 1 cut(s) 786
AccII CGCG 1 cut(s) 862
AciI CCGC 5 cut(s) 660, 786, 844, 847, 862
AclWI GGATC 2 cut(s) 187, 250
AcoI YGGCCR 2 cut(s) 497, 1098
AcsI RAATTY 1 cut(s) 151
AcyI GRCGYC 2 cut(s) 95, 121
AfaI GTAC 4 cut(s) 181, 617, 679, 1018
AfiI CCNNNNNNNGG 7 cut(s) 28, 66, 232, 283, 612, 618, 950
AflIII ACRYGT 1 cut(s) 674
AgsI TTSAA 5 cut(s) 672, 714, 798, 934, 1086
AhdI GACNNNNNGTC 1 cut(s) 120
AhlI ACTAGT 1 cut(s) 406
AjnI CCWGG 1 cut(s) 1110
AluBI AGCT 6 cut(s) 63, 316, 534, 774, 837, 1035
AluI AGCT 6 cut(s) 63, 316, 534, 774, 837, 1035
Alw26I GTCTC 1 cut(s) 497
AlwI GGATC 2 cut(s) 187, 250
AlwNI CAGNNNCTG 1 cut(s) 537
Ama87I CYCGRG 2 cut(s) 160, 911
AoxI GGCC 3 cut(s) 497, 1067, 1098
ApeKI GCWGC 2 cut(s) 531, 1047
ApoI RAATTY 1 cut(s) 151
Asp700I GAANNNNTTC 2 cut(s) 155, 355
AspS9I GGNCC 1 cut(s) 510
AsuC2I CCSGG 5 cut(s) 234, 309, 613, 912, 913
AsuHPI GGTGA 4 cut(s) 43, 390, 464, 886
AvaI CYCGRG 2 cut(s) 160, 911
AvaII GGWCC 1 cut(s) 510
BaeGI GKGCMC 2 cut(s) 666, 912
BalI TGGCCA 1 cut(s) 1100
BanI GGYRCC 2 cut(s) 273, 365
BbsI GAAGAC 3 cut(s) 98, 179, 961
BbvI GCAGC 2 cut(s) 543, 1034
BccI CCATC 4 cut(s) 60, 151, 380, 532
BceAI ACGGC 1 cut(s) 1054
BciT130I CCWGG 1 cut(s) 1112
BciVI GTATCC 1 cut(s) 1100
BcnI CCSGG 5 cut(s) 234, 309, 613, 912, 913
BcoDI GTCTC 1 cut(s) 497
BcuI ACTAGT 1 cut(s) 406
BfaI CTAG 4 cut(s) 341, 407, 692, 775
BfuI GTATCC 1 cut(s) 1100
BglII AGATCT 1 cut(s) 588
BisI GCNGC 3 cut(s) 532, 845, 1048
BlsI GCNGC 3 cut(s) 533, 846, 1049
Bme1390I CCNGG 6 cut(s) 234, 309, 613, 912, 913, 1112
Bme18I GGWCC 1 cut(s) 510
BmeRI GACNNNNNGTC 1 cut(s) 120
BmeT110I CYCGRG 2 cut(s) 160, 911
BmgT120I GGNCC 1 cut(s) 510
BmiI GGNNCC 6 cut(s) 187, 275, 358, 367, 512, 1026
BmrFI CCNGG 6 cut(s) 234, 309, 613, 912, 913, 1112
BmsI GCATC 3 cut(s) 569, 647, 990
BpiI GAAGAC 3 cut(s) 98, 179, 961
BplI GAGNNNNNCTC 2 cut(s) 775, 807
BpmI CTGGAG 1 cut(s) 859
BpuMI CCSGG 5 cut(s) 234, 309, 613, 912, 913
BsaBI GATNNNNATC 1 cut(s) 980
BsaHI GRCGYC 2 cut(s) 95, 121
BsaJI CCNNGG 4 cut(s) 84, 233, 824, 911
BsaXI ACNNNNNCTCC 2 cut(s) 1009, 1039
Bsc4I CCNNNNNNNGG 7 cut(s) 28, 66, 232, 283, 612, 618, 950
Bse1I ACTGG 4 cut(s) 181, 505, 623, 1108
Bse3DI GCAATG 1 cut(s) 137
Bse8I GATNNNNATC 1 cut(s) 980
BseBI CCWGG 1 cut(s) 1112
BseDI CCNNGG 4 cut(s) 84, 233, 824, 911
BseGI GGATG 2 cut(s) 900, 981
BseJI GATNNNNATC 1 cut(s) 980
BseLI CCNNNNNNNGG 7 cut(s) 28, 66, 232, 283, 612, 618, 950
BseMI GCAATG 1 cut(s) 137
BseMII CTCAG 2 cut(s) 529, 1072
BseNI ACTGG 4 cut(s) 181, 505, 623, 1108
BseRI GAGGAG 1 cut(s) 49
BseSI GKGCMC 2 cut(s) 666, 912
BseXI GCAGC 2 cut(s) 543, 1034
Bsh1236I CGCG 1 cut(s) 862
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 3 cut(s) 499, 1069, 1100
BshNI GGYRCC 2 cut(s) 273, 365
BsiEI CGRYCG 1 cut(s) 612
BsiHKCI CYCGRG 2 cut(s) 160, 911
BsiSI CCGG 6 cut(s) 233, 284, 308, 496, 612, 912
BslFI GGGAC 6 cut(s) 250, 427, 438, 496, 802, 928
BslI CCNNNNNNNGG 7 cut(s) 28, 66, 232, 283, 612, 618, 950
BsmAI GTCTC 1 cut(s) 497
BsmFI GGGAC 6 cut(s) 250, 427, 438, 496, 802, 928
BsnI GGCC 3 cut(s) 499, 1069, 1100
BsoBI CYCGRG 2 cut(s) 160, 911
Bsp1286I GDGCHC 2 cut(s) 666, 912
Bsp143I GATC 4 cut(s) 192, 255, 588, 857
BspACI CCGC 5 cut(s) 660, 786, 844, 847, 862
BspANI GGCC 3 cut(s) 499, 1069, 1100
BspCNI CTCAG 2 cut(s) 530, 1071
BspFNI CGCG 1 cut(s) 862
BspLI GGNNCC 6 cut(s) 187, 275, 358, 367, 512, 1026
BspPI GGATC 2 cut(s) 187, 250
BspT107I GGYRCC 2 cut(s) 273, 365
BsrBI CCGCTC 1 cut(s) 786
BsrDI GCAATG 1 cut(s) 137
BsrI ACTGG 4 cut(s) 181, 505, 623, 1108
BssECI CCNNGG 4 cut(s) 84, 233, 824, 911
BssMI GATC 4 cut(s) 192, 255, 588, 857
BssNI GRCGYC 2 cut(s) 95, 121
BssT1I CCWWGG 2 cut(s) 84, 824
Bst2UI CCWGG 1 cut(s) 1112
Bst4CI ACNGT 4 cut(s) 249, 470, 668, 881
Bst6I CTCTTC 5 cut(s) 7, 346, 386, 713, 929
BstACI GRCGYC 2 cut(s) 95, 121
BstC8I GCNNGC 2 cut(s) 584, 662
BstDEI CTNAG 3 cut(s) 434, 538, 1058
BstEII GGTNACC 1 cut(s) 396
BstF5I GGATG 2 cut(s) 900, 981
BstFNI CGCG 1 cut(s) 862
BstKTI GATC 4 cut(s) 195, 258, 591, 860
BstMAI GTCTC 1 cut(s) 497
BstMBI GATC 4 cut(s) 192, 255, 588, 857
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 4 cut(s) 127, 313, 528, 579
BstNI CCWGG 1 cut(s) 1112
BstPI GGTNACC 1 cut(s) 396
BstSCI CCNGG 6 cut(s) 232, 307, 611, 910, 911, 1110
BstSLI GKGCMC 2 cut(s) 666, 912
BstUI CGCG 1 cut(s) 862
BstV1I GCAGC 2 cut(s) 543, 1034
BstV2I GAAGAC 3 cut(s) 98, 179, 961
BstX2I RGATCY 1 cut(s) 588
BstXI CCANNNNNNTGG 2 cut(s) 379, 507
BstYI RGATCY 1 cut(s) 588
BsuI GTATCC 1 cut(s) 1100
BsuRI GGCC 3 cut(s) 499, 1069, 1100
BtsCI GGATG 2 cut(s) 900, 981
BtsIMutI CAGTG 3 cut(s) 512, 664, 1101
Cac8I GCNNGC 2 cut(s) 584, 662
CaiI CAGNNNCTG 1 cut(s) 537
Cfr13I GGNCC 1 cut(s) 510
Cfr9I CCCGGG 1 cut(s) 911
CseI GACGC 2 cut(s) 103, 110
Csp6I GTAC 4 cut(s) 180, 616, 678, 1017
CviAII CATG 2 cut(s) 757, 950
CviQI GTAC 4 cut(s) 180, 616, 678, 1017
DdeI CTNAG 3 cut(s) 434, 538, 1058
DpnI GATC 4 cut(s) 194, 257, 590, 859
DpnII GATC 4 cut(s) 192, 255, 588, 857
DriI GACNNNNNGTC 1 cut(s) 120
EaeI YGGCCR 2 cut(s) 497, 1098
Eam1104I CTCTTC 5 cut(s) 7, 346, 386, 713, 929
Eam1105I GACNNNNNGTC 1 cut(s) 120
EarI CTCTTC 5 cut(s) 7, 346, 386, 713, 929
EciI GGCGGA 1 cut(s) 862
Eco130I CCWWGG 2 cut(s) 84, 824
Eco47I GGWCC 1 cut(s) 510
Eco88I CYCGRG 2 cut(s) 160, 911
Eco91I GGTNACC 1 cut(s) 396
EcoO65I GGTNACC 1 cut(s) 396
EcoRII CCWGG 1 cut(s) 1110
EcoT14I CCWWGG 2 cut(s) 84, 824
ErhI CCWWGG 2 cut(s) 84, 824
FaeI CATG 2 cut(s) 760, 953
FalI AAGNNNNNCTT 4 cut(s) 320, 352, 953, 985
FaqI GGGAC 6 cut(s) 250, 427, 438, 496, 802, 928
FatI CATG 2 cut(s) 756, 949
FauI CCCGC 2 cut(s) 653, 779
Fnu4HI GCNGC 3 cut(s) 532, 845, 1048
FokI GGATG 2 cut(s) 907, 988
Fsp4HI GCNGC 3 cut(s) 532, 845, 1048
FspBI CTAG 4 cut(s) 341, 407, 692, 775
GluI GCNGC 3 cut(s) 532, 845, 1048
GsuI CTGGAG 1 cut(s) 859
HaeIII GGCC 3 cut(s) 499, 1069, 1100
HapII CCGG 6 cut(s) 233, 284, 308, 496, 612, 912
HgaI GACGC 2 cut(s) 103, 110
Hin1I GRCGYC 2 cut(s) 95, 121
Hin1II CATG 2 cut(s) 760, 953
HincII GTYRAC 1 cut(s) 114
HindII GTYRAC 1 cut(s) 114
HinfI GANTC 5 cut(s) 688, 790, 811, 916, 937
HpaII CCGG 6 cut(s) 233, 284, 308, 496, 612, 912
HphI GGTGA 4 cut(s) 43, 390, 464, 886
Hpy166II GTNNAC 3 cut(s) 114, 678, 877
Hpy188I TCNGA 2 cut(s) 377, 458
Hpy188III TCNNGA 6 cut(s) 160, 162, 259, 412, 973, 1060
Hpy8I GTNNAC 3 cut(s) 114, 678, 877
Hpy99I CGWCG 1 cut(s) 126
HpyAV CCTTC 4 cut(s) 120, 618, 708, 798
HpyCH4III ACNGT 4 cut(s) 249, 470, 668, 881
HpyCH4IV ACGT 3 cut(s) 110, 416, 674
HpyCH4V TGCA 1 cut(s) 586
HpyF10VI GCNNNNNNNGC 4 cut(s) 127, 313, 528, 579
HpyF3I CTNAG 3 cut(s) 434, 538, 1058
HpySE526I ACGT 3 cut(s) 110, 416, 674
Hsp92I GRCGYC 2 cut(s) 95, 121
Hsp92II CATG 2 cut(s) 760, 953
Kzo9I GATC 4 cut(s) 192, 255, 588, 857
LmnI GCTCC 2 cut(s) 145, 1030
Lsp1109I GCAGC 2 cut(s) 543, 1034
LweI GCATC 3 cut(s) 569, 647, 990
MaeI CTAG 4 cut(s) 341, 407, 692, 775
MaeII ACGT 3 cut(s) 110, 416, 674
MaeIII GTNAC 7 cut(s) 207, 243, 295, 396, 470, 1008, 1053
MalI GATC 4 cut(s) 194, 257, 590, 859
MbiI CCGCTC 1 cut(s) 786
MboI GATC 4 cut(s) 192, 255, 588, 857
MflI RGATCY 1 cut(s) 588
MhlI GDGCHC 2 cut(s) 666, 912
MlsI TGGCCA 1 cut(s) 1100
MluCI AATT 2 cut(s) 151, 645
MluNI TGGCCA 1 cut(s) 1100
MlyI GAGTC 5 cut(s) 682, 784, 820, 910, 946
Mox20I TGGCCA 1 cut(s) 1100
MroXI GAANNNNTTC 2 cut(s) 155, 355
MscI TGGCCA 1 cut(s) 1100
MseI TTAA 2 cut(s) 419, 817
MslI CAYNNNNRTG 2 cut(s) 377, 505
Msp20I TGGCCA 1 cut(s) 1100
MspA1I CMGCKG 2 cut(s) 63, 316
MspI CCGG 6 cut(s) 233, 284, 308, 496, 612, 912
MspR9I CCNGG 6 cut(s) 234, 309, 613, 912, 913, 1112
MvaI CCWGG 1 cut(s) 1112
MvnI CGCG 1 cut(s) 862
MwoI GCNNNNNNNGC 4 cut(s) 127, 313, 528, 579
NciI CCSGG 5 cut(s) 234, 309, 613, 912, 913
NdeII GATC 4 cut(s) 192, 255, 588, 857
NlaIII CATG 2 cut(s) 760, 953
NlaIV GGNNCC 6 cut(s) 187, 275, 358, 367, 512, 1026
NmuCI GTSAC 4 cut(s) 396, 470, 1008, 1053
PaeR7I CTCGAG 1 cut(s) 160
PdmI GAANNNNTTC 2 cut(s) 155, 355
PflMI CCANNNNNTGG 2 cut(s) 66, 950
PkrI GCNGC 3 cut(s) 533, 846, 1049
PleI GAGTC 5 cut(s) 682, 784, 819, 910, 945
PpsI GAGTC 5 cut(s) 682, 784, 819, 910, 945
Psp6I CCWGG 1 cut(s) 1110
PspEI GGTNACC 1 cut(s) 396
PspGI CCWGG 1 cut(s) 1110
PspN4I GGNNCC 6 cut(s) 187, 275, 358, 367, 512, 1026
PspPI GGNCC 1 cut(s) 510
PstNI CAGNNNCTG 1 cut(s) 537
PsuI RGATCY 1 cut(s) 588
PvuII CAGCTG 2 cut(s) 63, 316
RsaI GTAC 4 cut(s) 181, 617, 679, 1018
RsaNI GTAC 4 cut(s) 180, 616, 678, 1017
RseI CAYNNNNRTG 2 cut(s) 377, 505
SaqAI TTAA 2 cut(s) 419, 817
SatI GCNGC 3 cut(s) 532, 845, 1048
Sau3AI GATC 4 cut(s) 192, 255, 588, 857
Sau96I GGNCC 1 cut(s) 510
SchI GAGTC 5 cut(s) 682, 784, 820, 910, 946
ScrFI CCNGG 6 cut(s) 234, 309, 613, 912, 913, 1112
SduI GDGCHC 2 cut(s) 666, 912
SfaNI GCATC 3 cut(s) 569, 647, 990
Sfr274I CTCGAG 1 cut(s) 160
SinI GGWCC 1 cut(s) 510
SlaI CTCGAG 1 cut(s) 160
SmaI CCCGGG 1 cut(s) 913
SmiMI CAYNNNNRTG 2 cut(s) 377, 505
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
SpeI ACTAGT 1 cut(s) 406
Sse9I AATT 2 cut(s) 151, 645
SsiI CCGC 5 cut(s) 660, 786, 844, 847, 862
SspMI CTAG 4 cut(s) 341, 407, 692, 775
StyD4I CCNGG 6 cut(s) 232, 307, 611, 910, 911, 1110
StyI CCWWGG 2 cut(s) 84, 824
TaaI ACNGT 4 cut(s) 249, 470, 668, 881
TaiI ACGT 3 cut(s) 113, 419, 677
TaqI TCGA 7 cut(s) 124, 161, 254, 577, 608, 686, 833
TaqII GACCGA 1 cut(s) 1027
TasI AATT 2 cut(s) 151, 645
TatI WGTACW 1 cut(s) 1016
TauI GCSGC 1 cut(s) 847
Tru1I TTAA 2 cut(s) 419, 817
Tru9I TTAA 2 cut(s) 419, 817
TscAI CASTG 3 cut(s) 512, 671, 1108
TseFI GTSAC 4 cut(s) 396, 470, 1008, 1053
TseI GCWGC 2 cut(s) 531, 1047
Tsp45I GTSAC 4 cut(s) 396, 470, 1008, 1053
TspDTI ATGAA 3 cut(s) 64, 745, 1093
TspGWI ACGGA 1 cut(s) 909
TspMI CCCGGG 1 cut(s) 911
TspRI CASTG 3 cut(s) 512, 671, 1108
Van91I CCANNNNNTGG 2 cut(s) 66, 950
VpaK11BI GGWCC 1 cut(s) 510
XapI RAATTY 1 cut(s) 151
XcmI CCANNNNNNNNNTGG 2 cut(s) 376, 1108
XhoI CTCGAG 1 cut(s) 160
XmaI CCCGGG 1 cut(s) 911
XmnI GAANNNNTTC 2 cut(s) 155, 355
XspI CTAG 4 cut(s) 341, 407, 692, 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.