Rmu_sc0008581.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008581.1
OG0000087
Physical Location & Seq
Reverse (-)
24694 .. 25667
974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008581.1_g000007.1.cds

Sequence Viewer

Length: 831 bp
atggatgatgcccaattgatggacatgctgatgggccagggagaggacgcccttcacatcgatgtcgacctagggtcgaaaggcacgagtcggttacttgaagaaactcttctggagatcaccgatgagggatatggtgagcctgaccccgacgctcccgtgacccacgtcgcgcagccttccaaggccgatattatcacgatagatgacaccgggatgggaaaagtaccggtctccgtgcctatttcctctcgttccactgggagcgatgaggtactacttcctggtgagaagaagagatcccataggcaccggcatcggactgataaggaggtgacgtacactggccaggatgttcaaggtattggtgcgaagaggcagaagaaagattacccgggaccagagtcgtcgccttcgcggcaccggcatcggactgataaggagccttcgcttggcctgttatctcccgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgctgatgagaagttcgcgcggtccatgctcggggatctgaaggatattgacctcgaccgggttcgggccaaggataatactccccaggagaatcgccgtcttgcccgggagtcaatgatgcgggcactcttcaatgtgtacgccattgatgccagtgaggaagatactcatctgaaggaggaggttagcaatctctccgggcaggtgaagtatcttcacggcgagaaggccaagctggagaaggaacgggactcattgagggctgaaatggccgcggctaagcagagggttaatagctacgtgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

276

Amino Acids

30.72

Weight (kDa)

5.78

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 718
Acc36I ACCTGC 1 cut(s) 718
AccB1I GGYRCC 2 cut(s) 309, 420
AccB7I CCANNNNNTGG 1 cut(s) 19
AccI GTMKAC 1 cut(s) 66
AccII CGCG 5 cut(s) 173, 418, 542, 544, 800
AciI CCGC 6 cut(s) 418, 468, 544, 646, 798, 800
AclWI GGATC 2 cut(s) 294, 567
AcoI YGGCCR 2 cut(s) 346, 795
AcuI CTGAAG 2 cut(s) 584, 719
AcyI GRCGYC 1 cut(s) 48
AfaI GTAC 5 cut(s) 228, 276, 341, 518, 665
AfiI CCNNNNNNNGG 6 cut(s) 19, 43, 452, 555, 583, 589
AflIII ACRYGT 1 cut(s) 825
AgeI ACCGGT 1 cut(s) 229
AgsI TTSAA 3 cut(s) 101, 359, 658
AhdI GACNNNNNGTC 1 cut(s) 73
AjiI CACGTC 1 cut(s) 169
AjnI CCWGG 4 cut(s) 36, 283, 348, 609
AluBI AGCT 3 cut(s) 505, 760, 822
AluI AGCT 3 cut(s) 505, 760, 822
Alw26I GTCTC 1 cut(s) 238
AlwI GGATC 2 cut(s) 294, 567
AlwNI CAGNNNCTG 1 cut(s) 508
Ama87I CYCGRG 3 cut(s) 394, 554, 630
AoxI GGCC 7 cut(s) 34, 186, 346, 454, 591, 753, 795
ApeKI GCWGC 3 cut(s) 175, 502, 505
AsiGI ACCGGT 1 cut(s) 229
Asp700I GAANNNNTTC 1 cut(s) 108
AspA2I CCTAGG 1 cut(s) 70
AspLEI GCGC 2 cut(s) 175, 544
AspS9I GGNCC 4 cut(s) 34, 398, 546, 591
AsuC2I CCSGG 7 cut(s) 214, 395, 396, 584, 631, 632, 724
AsuHPI GGTGA 5 cut(s) 112, 149, 299, 346, 742
AvaI CYCGRG 3 cut(s) 394, 554, 630
AvaII GGWCC 2 cut(s) 398, 546
AvrII CCTAGG 1 cut(s) 70
BaeGI GKGCMC 1 cut(s) 652
BalI TGGCCA 1 cut(s) 348
BanI GGYRCC 2 cut(s) 309, 420
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
BauI CACGAG 1 cut(s) 85
BbvI GCAGC 3 cut(s) 187, 492, 514
BccI CCATC 4 cut(s) 13, 25, 211, 503
BceAI ACGGC 2 cut(s) 606, 760
BcgI CGANNNNNNTGC 4 cut(s) 299, 333, 410, 444
BciT130I CCWGG 4 cut(s) 38, 285, 350, 611
BcnI CCSGG 7 cut(s) 214, 395, 396, 584, 631, 632, 724
BcoDI GTCTC 1 cut(s) 238
BfaI CTAG 1 cut(s) 71
BfuAI ACCTGC 1 cut(s) 718
BglI GCCNNNNNGGC 1 cut(s) 418
BisI GCNGC 6 cut(s) 176, 419, 503, 506, 798, 801
BlnI CCTAGG 1 cut(s) 70
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 6 cut(s) 177, 420, 504, 507, 799, 802
Bme18I GGWCC 2 cut(s) 398, 546
BmeRI GACNNNNNGTC 1 cut(s) 73
BmeT110I CYCGRG 3 cut(s) 394, 554, 630
BmgBI CACGTC 1 cut(s) 169
BmgT120I GGNCC 4 cut(s) 34, 398, 546, 591
BmiI GGNNCC 4 cut(s) 311, 399, 422, 444
BmrI ACTGGG 1 cut(s) 270
BmsI GCATC 4 cut(s) 325, 436, 633, 664
BmuI ACTGGG 1 cut(s) 270
BoxI GACNNNNGTC 2 cut(s) 167, 403
BpmI CTGGAG 2 cut(s) 134, 782
Bpu1102I GCTNAGC 1 cut(s) 804
BpuMI CCSGG 7 cut(s) 214, 395, 396, 584, 631, 632, 724
Bsa29I ATCGAT 1 cut(s) 60
BsaAI YACGTR 1 cut(s) 826
BsaBI GATNNNNATC 1 cut(s) 693
BsaHI GRCGYC 1 cut(s) 48
BsaI GGTCTC 1 cut(s) 238
BsaJI CCNNGG 8 cut(s) 37, 70, 183, 394, 594, 609, 630, 798
BsaWI WCCGGW 2 cut(s) 229, 475
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 6 cut(s) 19, 43, 452, 555, 583, 589
Bse118I RCCGGY 3 cut(s) 229, 312, 423
Bse1I ACTGG 3 cut(s) 265, 349, 678
Bse8I GATNNNNATC 1 cut(s) 693
BseBI CCWGG 4 cut(s) 38, 285, 350, 611
BseCI ATCGAT 1 cut(s) 60
BseDI CCNNGG 8 cut(s) 37, 70, 183, 394, 594, 609, 630, 798
BseGI GGATG 3 cut(s) 10, 222, 358
BseJI GATNNNNATC 1 cut(s) 693
BseLI CCNNNNNNNGG 6 cut(s) 19, 43, 452, 555, 583, 589
BseMII CTCAG 1 cut(s) 500
BseNI ACTGG 3 cut(s) 265, 349, 678
BseRI GAGGAG 1 cut(s) 719
BseSI GKGCMC 1 cut(s) 652
BseXI GCAGC 3 cut(s) 187, 492, 514
Bsh1236I CGCG 5 cut(s) 173, 418, 542, 544, 800
Bsh1285I CGRYCG 1 cut(s) 583
BshFI GGCC 7 cut(s) 36, 188, 348, 456, 593, 755, 797
BshNI GGYRCC 2 cut(s) 309, 420
BshTI ACCGGT 1 cut(s) 229
BshVI ATCGAT 1 cut(s) 60
BsiEI CGRYCG 1 cut(s) 583
BsiHKCI CYCGRG 3 cut(s) 394, 554, 630
BsiSI CCGG 9 cut(s) 213, 230, 313, 395, 424, 476, 583, 631, 723
BslFI GGGAC 2 cut(s) 411, 788
BslI CCNNNNNNNGG 6 cut(s) 19, 43, 452, 555, 583, 589
BsmAI GTCTC 1 cut(s) 238
BsmFI GGGAC 2 cut(s) 411, 788
BsnI GGCC 7 cut(s) 36, 188, 348, 456, 593, 755, 797
Bso31I GGTCTC 1 cut(s) 238
BsoBI CYCGRG 3 cut(s) 394, 554, 630
Bsp1286I GDGCHC 1 cut(s) 652
Bsp143I GATC 3 cut(s) 117, 299, 559
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 6 cut(s) 418, 468, 544, 646, 798, 800
BspANI GGCC 7 cut(s) 36, 188, 348, 456, 593, 755, 797
BspCNI CTCAG 1 cut(s) 501
BspDI ATCGAT 1 cut(s) 60
BspFNI CGCG 5 cut(s) 173, 418, 542, 544, 800
BspLI GGNNCC 4 cut(s) 311, 399, 422, 444
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 2 cut(s) 294, 567
BspT107I GGYRCC 2 cut(s) 309, 420
BspTNI GGTCTC 1 cut(s) 238
BsrFI RCCGGY 3 cut(s) 229, 312, 423
BsrI ACTGG 3 cut(s) 265, 349, 678
BssAI RCCGGY 3 cut(s) 229, 312, 423
BssECI CCNNGG 8 cut(s) 37, 70, 183, 394, 594, 609, 630, 798
BssMI GATC 3 cut(s) 117, 299, 559
BssNI GRCGYC 1 cut(s) 48
BssSI CACGAG 1 cut(s) 85
BssT1I CCWWGG 3 cut(s) 70, 183, 594
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 4 cut(s) 38, 285, 350, 611
Bst6I CTCTTC 4 cut(s) 114, 290, 368, 659
BstACI GRCGYC 1 cut(s) 48
BstBAI YACGTR 1 cut(s) 826
BstC8I GCNNGC 1 cut(s) 648
BstDEI CTNAG 2 cut(s) 509, 804
BstDSI CCRYGG 1 cut(s) 798
BstF5I GGATG 3 cut(s) 10, 222, 358
BstFNI CGCG 5 cut(s) 173, 418, 542, 544, 800
BstHHI GCGC 2 cut(s) 175, 544
BstKTI GATC 3 cut(s) 120, 302, 562
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 3 cut(s) 117, 299, 559
BstMCI CGRYCG 1 cut(s) 583
BstMWI GCNNNNNNNGC 6 cut(s) 418, 424, 499, 550, 674, 794
BstNI CCWGG 4 cut(s) 38, 285, 350, 611
BstNSI RCATGY 1 cut(s) 28
BstPAI GACNNNNGTC 2 cut(s) 167, 403
BstSLI GKGCMC 1 cut(s) 652
BstUI CGCG 5 cut(s) 173, 418, 542, 544, 800
BstV1I GCAGC 3 cut(s) 187, 492, 514
BstX2I RGATCY 2 cut(s) 299, 559
BstYI RGATCY 2 cut(s) 299, 559
Bsu15I ATCGAT 1 cut(s) 60
BsuRI GGCC 7 cut(s) 36, 188, 348, 456, 593, 755, 797
BsuTUI ATCGAT 1 cut(s) 60
BtgI CCRYGG 1 cut(s) 798
BtgZI GCGATG 1 cut(s) 282
BtrI CACGTC 1 cut(s) 169
BtsCI GGATG 3 cut(s) 10, 222, 358
BtsIMutI CAGTG 3 cut(s) 258, 342, 685
BveI ACCTGC 1 cut(s) 718
Cac8I GCNNGC 1 cut(s) 648
CaiI CAGNNNCTG 1 cut(s) 508
CfoI GCGC 2 cut(s) 175, 544
Cfr10I RCCGGY 3 cut(s) 229, 312, 423
Cfr13I GGNCC 4 cut(s) 34, 398, 546, 591
Cfr42I CCGCGG 1 cut(s) 801
Cfr9I CCCGGG 2 cut(s) 394, 630
ClaI ATCGAT 1 cut(s) 60
CseI GACGC 2 cut(s) 56, 161
Csp6I GTAC 5 cut(s) 227, 275, 340, 517, 664
CspAI ACCGGT 1 cut(s) 229
CviAII CATG 2 cut(s) 25, 550
CviQI GTAC 5 cut(s) 227, 275, 340, 517, 664
DdeI CTNAG 2 cut(s) 509, 804
DpnI GATC 3 cut(s) 119, 301, 561
DpnII GATC 3 cut(s) 117, 299, 559
DriI GACNNNNNGTC 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 346, 795
Eam1104I CTCTTC 4 cut(s) 114, 290, 368, 659
Eam1105I GACNNNNNGTC 1 cut(s) 73
EarI CTCTTC 4 cut(s) 114, 290, 368, 659
Eco130I CCWWGG 3 cut(s) 70, 183, 594
Eco31I GGTCTC 1 cut(s) 238
Eco47I GGWCC 2 cut(s) 398, 546
Eco57I CTGAAG 2 cut(s) 584, 719
Eco88I CYCGRG 3 cut(s) 394, 554, 630
EcoRII CCWGG 4 cut(s) 36, 283, 348, 609
EcoT14I CCWWGG 3 cut(s) 70, 183, 594
ErhI CCWWGG 3 cut(s) 70, 183, 594
FaeI CATG 2 cut(s) 28, 553
FaiI YATR 4 cut(s) 26, 135, 306, 551
FalI AAGNNNNNCTT 2 cut(s) 93, 125
FaqI GGGAC 2 cut(s) 411, 788
FatI CATG 2 cut(s) 24, 549
FauI CCCGC 2 cut(s) 475, 639
FblI GTMKAC 1 cut(s) 66
Fnu4HI GCNGC 6 cut(s) 176, 419, 503, 506, 798, 801
FokI GGATG 3 cut(s) 17, 229, 365
Fsp4HI GCNGC 6 cut(s) 176, 419, 503, 506, 798, 801
FspBI CTAG 1 cut(s) 71
GlaI GCGC 2 cut(s) 174, 543
GluI GCNGC 6 cut(s) 176, 419, 503, 506, 798, 801
GsuI CTGGAG 2 cut(s) 134, 782
HaeIII GGCC 7 cut(s) 36, 188, 348, 456, 593, 755, 797
HapII CCGG 9 cut(s) 213, 230, 313, 395, 424, 476, 583, 631, 723
HgaI GACGC 2 cut(s) 56, 161
HhaI GCGC 2 cut(s) 175, 544
Hin1I GRCGYC 1 cut(s) 48
Hin1II CATG 2 cut(s) 28, 553
Hin6I GCGC 2 cut(s) 173, 542
HinP1I GCGC 2 cut(s) 173, 542
HincII GTYRAC 1 cut(s) 67
HindII GTYRAC 1 cut(s) 67
HinfI GANTC 5 cut(s) 88, 404, 616, 635, 776
HpaII CCGG 9 cut(s) 213, 230, 313, 395, 424, 476, 583, 631, 723
HphI GGTGA 5 cut(s) 112, 149, 299, 346, 742
Hpy166II GTNNAC 3 cut(s) 67, 342, 664
Hpy188I TCNGA 4 cut(s) 321, 432, 564, 699
Hpy188III TCNNGA 2 cut(s) 113, 199
Hpy8I GTNNAC 3 cut(s) 67, 342, 664
Hpy99I CGWCG 3 cut(s) 155, 173, 412
HpyAV CCTTC 8 cut(s) 62, 189, 423, 456, 559, 694, 745, 760
HpyCH4IV ACGT 3 cut(s) 168, 338, 825
HpyF10VI GCNNNNNNNGC 6 cut(s) 418, 424, 499, 550, 674, 794
HpyF3I CTNAG 2 cut(s) 509, 804
HpySE526I ACGT 3 cut(s) 168, 338, 825
Hsp92I GRCGYC 1 cut(s) 48
Hsp92II CATG 2 cut(s) 28, 553
HspAI GCGC 2 cut(s) 173, 542
KspI CCGCGG 1 cut(s) 801
Kzo9I GATC 3 cut(s) 117, 299, 559
LmnI GCTCC 3 cut(s) 160, 264, 442
Lsp1109I GCAGC 3 cut(s) 187, 492, 514
LweI GCATC 4 cut(s) 325, 436, 633, 664
MaeI CTAG 1 cut(s) 71
MaeII ACGT 3 cut(s) 168, 338, 825
MaeIII GTNAC 3 cut(s) 93, 160, 334
MalI GATC 3 cut(s) 119, 301, 561
MboI GATC 3 cut(s) 117, 299, 559
MboII GAAGA 9 cut(s) 101, 113, 304, 307, 385, 394, 646, 698, 731
MfeI CAATTG 1 cut(s) 14
MflI RGATCY 2 cut(s) 299, 559
MhlI GDGCHC 1 cut(s) 652
MlsI TGGCCA 1 cut(s) 348
MluCI AATT 1 cut(s) 14
MluNI TGGCCA 1 cut(s) 348
MlyI GAGTC 4 cut(s) 97, 413, 644, 770
Mox20I TGGCCA 1 cut(s) 348
MroXI GAANNNNTTC 1 cut(s) 108
MscI TGGCCA 1 cut(s) 348
MseI TTAA 1 cut(s) 816
MslI CAYNNNNRTG 3 cut(s) 29, 60, 215
Msp20I TGGCCA 1 cut(s) 348
MspA1I CMGCKG 2 cut(s) 505, 800
MspI CCGG 9 cut(s) 213, 230, 313, 395, 424, 476, 583, 631, 723
MunI CAATTG 1 cut(s) 14
MvaI CCWGG 4 cut(s) 38, 285, 350, 611
MvnI CGCG 5 cut(s) 173, 418, 542, 544, 800
MwoI GCNNNNNNNGC 6 cut(s) 418, 424, 499, 550, 674, 794
NciI CCSGG 7 cut(s) 214, 395, 396, 584, 631, 632, 724
NdeII GATC 3 cut(s) 117, 299, 559
NlaIII CATG 2 cut(s) 28, 553
NlaIV GGNNCC 4 cut(s) 311, 399, 422, 444
NmuCI GTSAC 2 cut(s) 160, 334
NspI RCATGY 1 cut(s) 28
PaqCI CACCTGC 1 cut(s) 718
PcsI WCGNNNNNNNCGW 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 108
PfeI GAWTC 1 cut(s) 616
PflMI CCANNNNNTGG 1 cut(s) 19
PinAI ACCGGT 1 cut(s) 229
PkrI GCNGC 6 cut(s) 177, 420, 504, 507, 799, 802
PleI GAGTC 4 cut(s) 96, 412, 643, 770
PpsI GAGTC 4 cut(s) 96, 412, 643, 770
Ppu21I YACGTR 1 cut(s) 826
PshAI GACNNNNGTC 2 cut(s) 167, 403
Psp6I CCWGG 4 cut(s) 36, 283, 348, 609
PspGI CCWGG 4 cut(s) 36, 283, 348, 609
PspN4I GGNNCC 4 cut(s) 311, 399, 422, 444
PspPI GGNCC 4 cut(s) 34, 398, 546, 591
PstNI CAGNNNCTG 1 cut(s) 508
PsuI RGATCY 2 cut(s) 299, 559
PvuII CAGCTG 1 cut(s) 505
RsaI GTAC 5 cut(s) 228, 276, 341, 518, 665
RsaNI GTAC 5 cut(s) 227, 275, 340, 517, 664
RseI CAYNNNNRTG 3 cut(s) 29, 60, 215
SacII CCGCGG 1 cut(s) 801
SalI GTCGAC 1 cut(s) 65
SaqAI TTAA 1 cut(s) 816
SatI GCNGC 6 cut(s) 176, 419, 503, 506, 798, 801
Sau3AI GATC 3 cut(s) 117, 299, 559
Sau96I GGNCC 4 cut(s) 34, 398, 546, 591
SchI GAGTC 4 cut(s) 97, 413, 644, 770
SduI GDGCHC 1 cut(s) 652
SfaNI GCATC 4 cut(s) 325, 436, 633, 664
Sfr303I CCGCGG 1 cut(s) 801
SgrBI CCGCGG 1 cut(s) 801
SinI GGWCC 2 cut(s) 398, 546
SmaI CCCGGG 2 cut(s) 396, 632
SmiMI CAYNNNNRTG 3 cut(s) 29, 60, 215
Sse9I AATT 1 cut(s) 14
SsiI CCGC 6 cut(s) 418, 468, 544, 646, 798, 800
SspMI CTAG 1 cut(s) 71
StyI CCWWGG 3 cut(s) 70, 183, 594
TaiI ACGT 3 cut(s) 171, 341, 828
TaqI TCGA 4 cut(s) 60, 66, 77, 579
TasI AATT 1 cut(s) 14
TauI GCSGC 3 cut(s) 421, 800, 803
TfiI GAWTC 1 cut(s) 616
Tru1I TTAA 1 cut(s) 816
Tru9I TTAA 1 cut(s) 816
TscAI CASTG 3 cut(s) 265, 349, 685
TseFI GTSAC 2 cut(s) 160, 334
TseI GCWGC 3 cut(s) 175, 502, 505
Tsp45I GTSAC 2 cut(s) 160, 334
TspGWI ACGGA 1 cut(s) 226
TspMI CCCGGG 2 cut(s) 394, 630
TspRI CASTG 3 cut(s) 265, 349, 685
Van91I CCANNNNNTGG 1 cut(s) 19
VpaK11BI GGWCC 2 cut(s) 398, 546
XceI RCATGY 1 cut(s) 28
XmaI CCCGGG 2 cut(s) 394, 630
XmaJI CCTAGG 1 cut(s) 70
XmiI GTMKAC 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 108
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.