Rmu_sc0001302.1_g000017

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001302.1
OG0000087
Physical Location & Seq
Forward (+)
42685 .. 45446
2762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001302.1_g000017.1.cds

Sequence Viewer

Length: 1971 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagttctctgccaggcaagctgaagtggatatcgaccggtacttaggctgggtagatcaattagcggagaacacggggtcctcgactggggtgttctcggagagtagtgaggagtccgacgagggtgagagcgagggtggatccgcggaggccccggtagtcacggtggccattccagagggcattccaaagccaaggtacacacttacggatgggaccgtatgcgacgaacctgggagaagcatgacgatgaaggagatcatcgacatacgactgaagtgggggataccggacgcggtggagcttaggcctcttagggatggggagatggccgcgaatcttgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttgtcgctaccactgccccggtacctacagtatctgctgcggatgctgaacctgtccccggggcagctgaccccgaatgtcgttcgccaaatatacagtatgatggctatgtgggacttgtgccaacaagggtggccctccataaacgagttccgggcgctagttatcgacatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggggggcggtggcagataaaaaataagaagtggcagctgaccggtactttccaagctatcggggcccagtcctatactctatccgaagtagaaaggaagaggatagcccgggtatatgccgtgtggtcagagaaagagaggagctcttatagattcatccggcactctaaactttataggctagggttagggtggctccccgtgaaagcgccaaagaggaaaccccggaaaggcaaggaggaggacaggatggatgatgcccaactgatggacatgctgatgggccagggagaagacgccctgcacatcgatgtcgacctagggtcgaaaggtacgagtcggtccattgaagaaacccttctggagatcaccgatgagggatacggtgaacctgatcctgacgctcccgtgacccacgtcgcgcagccctccatggccgctgttattacgatagatgacaccggaatgggaaaagtaccggccccagtgcctatttcctctcgttccactgggagcgatgaggcattactccctggtgagaagaagagatcccacaggcaccggcatcggactgataaggaggtgacgtatactggccgggatgtccaaggtactggtgcgaagaggcaaaagaaagatcacctgggatcagagtcgttgccttctcttggcctgttatctcgcgccattccggtaatccccaagaagcccatcaagcagctgctgagtgagtacggggttgctgatgaaaagttcgtgcggtccatgcttggggatctgaaggatattgacctcgaccgggttcgggccaaggataacactccccaggagaattgccgtctcgcccgggaatcaatgatgcgggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggagggtgaggttgctgaggcgcgggaagaggtaaagaacgcccgggactccgagaaaaaggctgcagagtctgccgtctcatggaaggagaaggcagaccacctggaggattgtcttcccacggagaggcacgaggccgtggaggagtacaagtcctcggaagagctcatctctatgctagttgctgcccaagataaggctgtcattatgaagttcaaggagtggggtggcggccgggagctgggtattccatggatgcctgaaaacgaccccgttcatatcccggatgaaaaaggctgcgggacctacttcttcaatgatctcgtaaggccctgtccaggatggatccagtcctcggggctctgggtagacttgcttcatgacccagtcccccaattttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

656

Amino Acids

73.53

Weight (kDa)

5.4

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 450
AccB1I GGYRCC 2 cut(s) 450, 1206
AccB7I CCANNNNNTGG 1 cut(s) 916
AccI GTMKAC 3 cut(s) 963, 1238, 1938
AccII CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
AclWI GGATC 9 cut(s) 40, 177, 190, 1037, 1191, 1303, 1431, 1909, 1922
AcoI YGGCCR 5 cut(s) 210, 372, 1083, 1243, 1801
AcuI CTGAAG 4 cut(s) 84, 338, 1448, 1583
AcyI GRCGYC 2 cut(s) 945, 1539
AgeI ACCGGT 2 cut(s) 78, 689
AgsI TTSAA 4 cut(s) 998, 1522, 1786, 1885
AhdI GACNNNNNGTC 1 cut(s) 970
AjiI CACGTC 1 cut(s) 1066
AjnI CCWGG 9 cut(s) 14, 53, 274, 933, 1180, 1290, 1473, 1671, 1906
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
Alw21I GWGCWC 2 cut(s) 794, 1737
Alw26I GTCTC 2 cut(s) 1493, 1651
AlwI GGATC 9 cut(s) 40, 177, 190, 1037, 1191, 1303, 1431, 1909, 1922
AlwNI CAGNNNCTG 3 cut(s) 463, 1372, 1640
Ama87I CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
ApaI GGGCCC 1 cut(s) 715
AsiGI ACCGGT 2 cut(s) 78, 689
Asp700I GAANNNNTTC 1 cut(s) 1005
Asp718I GGTACC 1 cut(s) 450
AspA2I CCTAGG 1 cut(s) 967
AspLEI GCGC 6 cut(s) 403, 589, 859, 1072, 1334, 1591
AsuHPI GGTGA 7 cut(s) 179, 1009, 1046, 1196, 1243, 1280, 1586
AvaI CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
AvaII GGWCC 5 cut(s) 120, 258, 990, 1410, 1872
AvrII CCTAGG 1 cut(s) 967
BaeGI GKGCMC 2 cut(s) 715, 1516
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 2 cut(s) 182, 1914
BanI GGYRCC 2 cut(s) 450, 1206
BanII GRGCYC 4 cut(s) 715, 794, 1737, 1932
BarI GAAGNNNNNNTAC 2 cut(s) 1929, 1961
BauI CACGAG 2 cut(s) 407, 1700
BbsI GAAGAC 2 cut(s) 948, 1676
Bbv12I GWGCWC 2 cut(s) 794, 1737
BbvCI CCTCAGC 1 cut(s) 1584
BccI CCATC 9 cut(s) 248, 356, 364, 526, 892, 910, 922, 1367, 1905
BceAI ACGGC 4 cut(s) 752, 1470, 1628, 1691
BcgI CGANNNNNNTGC 2 cut(s) 1196, 1230
BciT130I CCWGG 9 cut(s) 16, 55, 276, 935, 1182, 1292, 1475, 1673, 1908
BciVI GTATCC 3 cut(s) 19, 321, 1022
BcoDI GTCTC 2 cut(s) 1493, 1651
BfaI CTAG 5 cut(s) 590, 644, 830, 968, 1748
BfmI CTRYAG 2 cut(s) 455, 1632
BfoI RGCGCY 3 cut(s) 404, 590, 860
BfuI GTATCC 3 cut(s) 19, 321, 1022
BlnI CCTAGG 1 cut(s) 967
Bme18I GGWCC 5 cut(s) 120, 258, 990, 1410, 1872
BmeRI GACNNNNNGTC 1 cut(s) 970
BmeT110I CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
BmgBI CACGTC 1 cut(s) 1066
BmrI ACTGGG 5 cut(s) 138, 709, 1127, 1167, 1949
BmsI GCATC 5 cut(s) 462, 895, 1222, 1497, 1815
BmuI ACTGGG 5 cut(s) 138, 709, 1127, 1167, 1949
BoxI GACNNNNGTC 1 cut(s) 1064
BpiI GAAGAC 2 cut(s) 948, 1676
BplI GAGNNNNNCTC 4 cut(s) 776, 808, 1724, 1756
BpmI CTGGAG 2 cut(s) 1031, 1694
Bpu10I CCTNAGC 2 cut(s) 347, 1584
Bsa29I ATCGAT 1 cut(s) 957
BsaBI GATNNNNATC 1 cut(s) 1557
BsaHI GRCGYC 2 cut(s) 945, 1539
BsaWI WCCGGW 5 cut(s) 78, 331, 689, 1109, 1339
BsaXI ACNNNNNCTCC 4 cut(s) 1220, 1250, 1706, 1736
Bse118I RCCGGY 4 cut(s) 78, 689, 1126, 1209
Bse1I ACTGG 9 cut(s) 43, 133, 715, 1133, 1162, 1246, 1267, 1918, 1955
Bse8I GATNNNNATC 1 cut(s) 1557
BseBI CCWGG 9 cut(s) 16, 55, 276, 935, 1182, 1292, 1475, 1673, 1908
BseCI ATCGAT 1 cut(s) 957
BseJI GATNNNNATC 1 cut(s) 1557
BseMII CTCAG 2 cut(s) 1364, 1575
BseNI ACTGG 9 cut(s) 43, 133, 715, 1133, 1162, 1246, 1267, 1918, 1955
BseRI GAGGAG 5 cut(s) 167, 802, 902, 1583, 1727
BseSI GKGCMC 2 cut(s) 715, 1516
BseX3I CGGCCG 1 cut(s) 1801
BseYI CCCAGC 3 cut(s) 90, 647, 1810
BsgI GTGCAG 2 cut(s) 389, 935
Bsh1236I CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
Bsh1285I CGRYCG 3 cut(s) 79, 1447, 1804
BshNI GGYRCC 2 cut(s) 450, 1206
BshTI ACCGGT 2 cut(s) 78, 689
BshVI ATCGAT 1 cut(s) 957
BsiEI CGRYCG 3 cut(s) 79, 1447, 1804
BsiHKAI GWGCWC 2 cut(s) 794, 1737
BsiHKCI CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
BslFI GGGAC 6 cut(s) 271, 469, 557, 1628, 1885, 1943
BsmAI GTCTC 2 cut(s) 1493, 1651
BsmBI CGTCTC 2 cut(s) 1493, 1651
BsmFI GGGAC 6 cut(s) 271, 469, 557, 1628, 1885, 1943
BsmI GAATGC 1 cut(s) 225
BsoBI CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
Bsp120I GGGCCC 1 cut(s) 711
Bsp1286I GDGCHC 5 cut(s) 715, 794, 1516, 1737, 1932
Bsp19I CCATGG 2 cut(s) 1080, 1820
BspCNI CTCAG 2 cut(s) 1365, 1576
BspDI ATCGAT 1 cut(s) 957
BspFNI CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
BspHI TCATGA 1 cut(s) 1948
BspMAI CTGCAG 1 cut(s) 1636
BspPI GGATC 9 cut(s) 40, 177, 190, 1037, 1191, 1303, 1431, 1909, 1922
BspQI GCTCTTC 1 cut(s) 1725
BspT107I GGYRCC 2 cut(s) 450, 1206
BsrFI RCCGGY 4 cut(s) 78, 689, 1126, 1209
BsrI ACTGG 9 cut(s) 43, 133, 715, 1133, 1162, 1246, 1267, 1918, 1955
BssAI RCCGGY 4 cut(s) 78, 689, 1126, 1209
BssNAI GTATAC 1 cut(s) 1239
BssNI GRCGYC 2 cut(s) 945, 1539
BssSI CACGAG 2 cut(s) 407, 1700
BssT1I CCWWGG 7 cut(s) 236, 424, 967, 1080, 1255, 1458, 1820
Bst1107I GTATAC 1 cut(s) 1239
Bst2BI CACGAG 2 cut(s) 407, 1700
Bst2UI CCWGG 9 cut(s) 16, 55, 276, 935, 1182, 1292, 1475, 1673, 1908
Bst4CI ACNGT 5 cut(s) 208, 262, 459, 527, 1034
Bst6I CTCTTC 6 cut(s) 740, 1187, 1265, 1523, 1590, 1725
BstACI GRCGYC 2 cut(s) 945, 1539
BstAPI GCANNNNNTGC 1 cut(s) 1640
BstC8I GCNNGC 3 cut(s) 60, 1512, 1543
BstDEI CTNAG 5 cut(s) 85, 347, 356, 1373, 1584
BstDSI CCRYGG 5 cut(s) 186, 1080, 1689, 1707, 1820
BstFNI CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
BstH2I RGCGCY 3 cut(s) 404, 590, 860
BstHHI GCGC 6 cut(s) 403, 589, 859, 1072, 1334, 1591
BstMAI GTCTC 2 cut(s) 1493, 1651
BstMCI CGRYCG 3 cut(s) 79, 1447, 1804
BstMWI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 710, 1363, 1414, 1538, 1640
BstNI CCWGG 9 cut(s) 16, 55, 276, 935, 1182, 1292, 1475, 1673, 1908
BstNSI RCATGY 2 cut(s) 604, 925
BstPAI GACNNNNGTC 1 cut(s) 1064
BstSFI CTRYAG 2 cut(s) 455, 1632
BstSLI GKGCMC 2 cut(s) 715, 1516
BstUI CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
BstV2I GAAGAC 2 cut(s) 948, 1676
BstX2I RGATCY 4 cut(s) 182, 1196, 1423, 1914
BstXI CCANNNNNNTGG 1 cut(s) 1262
BstYI RGATCY 4 cut(s) 182, 1196, 1423, 1914
BstZ17I GTATAC 1 cut(s) 1239
BstZI CGGCCG 1 cut(s) 1801
Bsu15I ATCGAT 1 cut(s) 957
BsuI GTATCC 3 cut(s) 19, 321, 1022
BsuTUI ATCGAT 1 cut(s) 957
BtgI CCRYGG 5 cut(s) 186, 1080, 1689, 1707, 1820
BtgZI GCGATG 1 cut(s) 1179
BtrI CACGTC 1 cut(s) 1066
BtsI GCAGTG 1 cut(s) 440
BtsIMutI CAGTG 3 cut(s) 440, 1140, 1155
Cac8I GCNNGC 3 cut(s) 60, 1512, 1543
CaiI CAGNNNCTG 3 cut(s) 463, 1372, 1640
CciI TCATGA 1 cut(s) 1948
CfoI GCGC 6 cut(s) 403, 589, 859, 1072, 1334, 1591
Cfr10I RCCGGY 4 cut(s) 78, 689, 1126, 1209
Cfr42I CCGCGG 1 cut(s) 189
Cfr9I CCCGGG 5 cut(s) 388, 487, 756, 1494, 1611
ClaI ATCGAT 1 cut(s) 957
CseI GACGC 4 cut(s) 344, 953, 1058, 1547
CspAI ACCGGT 2 cut(s) 78, 689
CspCI CAANNNNNGTGG 2 cut(s) 542, 577
CviAII CATG 8 cut(s) 286, 601, 922, 1081, 1414, 1650, 1821, 1949
DdeI CTNAG 5 cut(s) 85, 347, 356, 1373, 1584
DriI GACNNNNNGTC 1 cut(s) 970
EaeI YGGCCR 5 cut(s) 210, 372, 1083, 1243, 1801
EagI CGGCCG 1 cut(s) 1801
Eam1104I CTCTTC 6 cut(s) 740, 1187, 1265, 1523, 1590, 1725
Eam1105I GACNNNNNGTC 1 cut(s) 970
EarI CTCTTC 6 cut(s) 740, 1187, 1265, 1523, 1590, 1725
Ecl136II GAGCTC 2 cut(s) 792, 1735
EclXI CGGCCG 1 cut(s) 1801
Eco130I CCWWGG 7 cut(s) 236, 424, 967, 1080, 1255, 1458, 1820
Eco147I AGGCCT 1 cut(s) 352
Eco24I GRGCYC 4 cut(s) 715, 794, 1737, 1932
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 5 cut(s) 120, 258, 990, 1410, 1872
Eco52I CGGCCG 1 cut(s) 1801
Eco53kI GAGCTC 2 cut(s) 792, 1735
Eco57I CTGAAG 4 cut(s) 84, 338, 1448, 1583
Eco88I CYCGRG 6 cut(s) 388, 487, 756, 1494, 1611, 1924
EcoICRI GAGCTC 2 cut(s) 792, 1735
EcoO109I RGGNCCY 5 cut(s) 120, 193, 711, 1872, 1899
EcoRII CCWGG 9 cut(s) 14, 53, 274, 933, 1180, 1290, 1473, 1671, 1906
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 7 cut(s) 236, 424, 967, 1080, 1255, 1458, 1820
EcoT38I GRGCYC 4 cut(s) 715, 794, 1737, 1932
ErhI CCWWGG 7 cut(s) 236, 424, 967, 1080, 1255, 1458, 1820
Esp3I CGTCTC 2 cut(s) 1493, 1651
FaeI CATG 8 cut(s) 289, 604, 925, 1084, 1417, 1653, 1824, 1952
FalI AAGNNNNNCTT 2 cut(s) 990, 1022
FaqI GGGAC 6 cut(s) 271, 469, 557, 1628, 1885, 1943
FatI CATG 8 cut(s) 285, 600, 921, 1080, 1413, 1649, 1820, 1948
FauI CCCGC 3 cut(s) 1503, 1584, 1862
FblI GTMKAC 3 cut(s) 963, 1238, 1938
FriOI GRGCYC 4 cut(s) 715, 794, 1737, 1932
FspBI CTAG 5 cut(s) 590, 644, 830, 968, 1748
GlaI GCGC 6 cut(s) 402, 588, 858, 1071, 1333, 1590
GsaI CCCAGC 3 cut(s) 94, 651, 1814
GsuI CTGGAG 2 cut(s) 1031, 1694
HaeII RGCGCY 3 cut(s) 404, 590, 860
HgaI GACGC 4 cut(s) 344, 953, 1058, 1547
HhaI GCGC 6 cut(s) 403, 589, 859, 1072, 1334, 1591
Hin1I GRCGYC 2 cut(s) 945, 1539
Hin1II CATG 8 cut(s) 289, 604, 925, 1084, 1417, 1653, 1824, 1952
Hin6I GCGC 6 cut(s) 401, 587, 857, 1070, 1332, 1589
HinP1I GCGC 6 cut(s) 401, 587, 857, 1070, 1332, 1589
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HphI GGTGA 7 cut(s) 179, 1009, 1046, 1196, 1243, 1280, 1586
Hpy166II GTNNAC 6 cut(s) 243, 964, 1037, 1239, 1528, 1939
Hpy188III TCNNGA 4 cut(s) 218, 1010, 1046, 1949
Hpy8I GTNNAC 6 cut(s) 243, 964, 1037, 1239, 1528, 1939
Hpy99I CGWCG 4 cut(s) 40, 164, 272, 1070
HpyAV CCTTC 7 cut(s) 289, 1016, 1320, 1423, 1558, 1648, 1654
HpyCH4III ACNGT 5 cut(s) 208, 262, 459, 527, 1034
HpyCH4IV ACGT 2 cut(s) 1065, 1235
HpyCH4V TGCA 3 cut(s) 406, 952, 1634
HpyF10VI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 710, 1363, 1414, 1538, 1640
HpyF3I CTNAG 5 cut(s) 85, 347, 356, 1373, 1584
HpySE526I ACGT 2 cut(s) 1065, 1235
Hsp92I GRCGYC 2 cut(s) 945, 1539
Hsp92II CATG 8 cut(s) 289, 604, 925, 1084, 1417, 1653, 1824, 1952
HspAI GCGC 6 cut(s) 401, 587, 857, 1070, 1332, 1589
KpnI GGTACC 1 cut(s) 454
KspI CCGCGG 1 cut(s) 189
LguI GCTCTTC 1 cut(s) 1725
LmnI GCTCC 7 cut(s) 343, 423, 789, 849, 1057, 1161, 1807
LweI GCATC 5 cut(s) 462, 895, 1222, 1497, 1815
MaeI CTAG 5 cut(s) 590, 644, 830, 968, 1748
MaeII ACGT 2 cut(s) 1065, 1235
MaeIII GTNAC 3 cut(s) 202, 1057, 1231
MflI RGATCY 4 cut(s) 182, 1196, 1423, 1914
MhlI GDGCHC 5 cut(s) 715, 794, 1516, 1737, 1932
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 3 cut(s) 101, 1480, 1964
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 5 cut(s) 164, 994, 1310, 1610, 1646
MmeI TCCRAC 1 cut(s) 183
Mox20I TGGCCA 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 1005
MscI TGGCCA 1 cut(s) 212
MseI TTAA 1 cut(s) 1969
MslI CAYNNNNRTG 5 cut(s) 290, 926, 957, 1112, 1742
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 5 cut(s) 188, 496, 685, 1088, 1369
Mva1269I GAATGC 1 cut(s) 225
MvaI CCWGG 9 cut(s) 16, 55, 276, 935, 1182, 1292, 1475, 1673, 1908
MvnI CGCG 6 cut(s) 188, 338, 377, 1070, 1332, 1591
MwoI GCNNNNNNNGC 9 cut(s) 59, 383, 442, 472, 710, 1363, 1414, 1538, 1640
NcoI CCATGG 2 cut(s) 1080, 1820
NlaIII CATG 8 cut(s) 289, 604, 925, 1084, 1417, 1653, 1824, 1952
NmuCI GTSAC 3 cut(s) 202, 1057, 1231
NspI RCATGY 2 cut(s) 604, 925
PagI TCATGA 1 cut(s) 1948
PceI AGGCCT 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 1725
PcsI WCGNNNNNNNCGW 3 cut(s) 35, 122, 980
PctI GAATGC 1 cut(s) 225
PdmI GAANNNNTTC 1 cut(s) 1005
PfeI GAWTC 5 cut(s) 5, 379, 412, 801, 1499
PflFI GACNNNGTC 1 cut(s) 1955
PflMI CCANNNNNTGG 1 cut(s) 916
PfoI TCCNGGA 2 cut(s) 1851, 1906
PinAI ACCGGT 2 cut(s) 78, 689
PleI GAGTC 5 cut(s) 163, 993, 1309, 1610, 1645
PpsI GAGTC 5 cut(s) 163, 993, 1309, 1610, 1645
PpuMI RGGWCCY 2 cut(s) 120, 1872
PshAI GACNNNNGTC 1 cut(s) 1064
Psp124BI GAGCTC 2 cut(s) 794, 1737
Psp5II RGGWCCY 2 cut(s) 120, 1872
Psp6I CCWGG 9 cut(s) 14, 53, 274, 933, 1180, 1290, 1473, 1671, 1906
PspFI CCCAGC 3 cut(s) 90, 647, 1810
PspGI CCWGG 9 cut(s) 14, 53, 274, 933, 1180, 1290, 1473, 1671, 1906
PspOMI GGGCCC 1 cut(s) 711
PspPPI RGGWCCY 2 cut(s) 120, 1872
PstI CTGCAG 1 cut(s) 1636
PstNI CAGNNNCTG 3 cut(s) 463, 1372, 1640
PsuI RGATCY 4 cut(s) 182, 1196, 1423, 1914
PsyI GACNNNGTC 1 cut(s) 1955
PvuII CAGCTG 3 cut(s) 496, 685, 1369
RseI CAYNNNNRTG 5 cut(s) 290, 926, 957, 1112, 1742
SacI GAGCTC 2 cut(s) 794, 1737
SacII CCGCGG 1 cut(s) 189
SalI GTCGAC 1 cut(s) 962
SapI GCTCTTC 1 cut(s) 1725
SaqAI TTAA 1 cut(s) 1969
SchI GAGTC 5 cut(s) 164, 994, 1310, 1610, 1646
SduI GDGCHC 5 cut(s) 715, 794, 1516, 1737, 1932
SfaNI GCATC 5 cut(s) 462, 895, 1222, 1497, 1815
SfcI CTRYAG 2 cut(s) 455, 1632
Sfr303I CCGCGG 1 cut(s) 189
SgrBI CCGCGG 1 cut(s) 189
SinI GGWCC 5 cut(s) 120, 258, 990, 1410, 1872
SmaI CCCGGG 5 cut(s) 390, 489, 758, 1496, 1613
SmiMI CAYNNNNRTG 5 cut(s) 290, 926, 957, 1112, 1742
Sse9I AATT 3 cut(s) 101, 1480, 1964
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 5 cut(s) 590, 644, 830, 968, 1748
SstI GAGCTC 2 cut(s) 794, 1737
StuI AGGCCT 1 cut(s) 352
StyI CCWWGG 7 cut(s) 236, 424, 967, 1080, 1255, 1458, 1820
TaaI ACNGT 5 cut(s) 208, 262, 459, 527, 1034
TaiI ACGT 2 cut(s) 1068, 1238
TaqI TCGA 9 cut(s) 75, 125, 306, 597, 611, 957, 963, 974, 1443
TaqII GACCGA 1 cut(s) 978
TasI AATT 3 cut(s) 101, 1480, 1964
TatI WGTACW 1 cut(s) 1716
TauI GCSGC 3 cut(s) 377, 1088, 1803
TfiI GAWTC 5 cut(s) 5, 379, 412, 801, 1499
Tru1I TTAA 1 cut(s) 1969
Tru9I TTAA 1 cut(s) 1969
TscAI CASTG 3 cut(s) 447, 1140, 1162
TseFI GTSAC 3 cut(s) 202, 1057, 1231
Tsp45I GTSAC 3 cut(s) 202, 1057, 1231
TspDTI ATGAA 7 cut(s) 308, 793, 1410, 1793, 1835, 1872, 1937
TspGWI ACGGA 2 cut(s) 266, 1706
TspMI CCCGGG 5 cut(s) 388, 487, 756, 1494, 1611
TspRI CASTG 3 cut(s) 447, 1140, 1162
Tth111I GACNNNGTC 1 cut(s) 1955
Van91I CCANNNNNTGG 1 cut(s) 916
VpaK11BI GGWCC 5 cut(s) 120, 258, 990, 1410, 1872
XceI RCATGY 2 cut(s) 604, 925
XmaI CCCGGG 5 cut(s) 388, 487, 756, 1494, 1611
XmaJI CCTAGG 1 cut(s) 967
XmiI GTMKAC 3 cut(s) 963, 1238, 1938
XmnI GAANNNNTTC 1 cut(s) 1005
XspI CTAG 5 cut(s) 590, 644, 830, 968, 1748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.