Rmu_sc0000744.1_g000098

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000744.1
OG0000087
Physical Location & Seq
Reverse (-)
354706 .. 355424
719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000744.1_g000098.1.cds

Sequence Viewer

Length: 591 bp
atgctcgccgatttgaaggatatagacctcgatcgggtaccggcgaaggacaataccccgcaagagaatcgtcgcctcgcccgagaatcactgatgcgatcactgttcaacgtgtacgctattgacgctagcgaggaagatacgtacttgaaagagggggttagaagtctctccgggcaagtgaagtatcttcacggggagaagggcaagttggagaaggagcgggacctactgaagaagaaggtagagtccttaagtcccctggtgaccgagctggaggcagcgatacaacggatcgccgagctcgaagagtccgccacatcatggaaggcaagagcggagagcttggaggagcgtcttcctgtgaaaaggcaaaaggctgttgcagaataccagggttcccaagagcttattgacatgttgctgaagatgcaggacaaggccgtgatcatgaagtacagagagtgggtggtagctgggtacctagatgaggccaagttcaggcgggggctccttgagaagaagaagaaggagcgggaggctgctgccaaggagggtgccggtggatctcagagtaccgctcatgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

196

Amino Acids

22.31

Weight (kDa)

6.8

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 37, 480
AccB1I GGYRCC 3 cut(s) 37, 480, 557
AccB7I CCANNNNNTGG 1 cut(s) 324
AccBSI CCGCTC 4 cut(s) 223, 338, 535, 581
AciI CCGC 7 cut(s) 59, 223, 315, 338, 505, 535, 579
AclWI GGATC 2 cut(s) 302, 574
AcuI CTGAAG 2 cut(s) 254, 446
AfaI GTAC 6 cut(s) 39, 116, 146, 458, 482, 577
AfiI CCNNNNNNNGG 4 cut(s) 34, 324, 490, 501
AflII CTTAAG 1 cut(s) 253
AflIII ACRYGT 2 cut(s) 111, 417
AgsI TTSAA 3 cut(s) 16, 109, 151
AjnI CCWGG 2 cut(s) 261, 393
AjuI GAANNNNNNNTTGG 2 cut(s) 194, 226
AluBI AGCT 5 cut(s) 274, 304, 345, 409, 476
AluI AGCT 5 cut(s) 274, 304, 345, 409, 476
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 2 cut(s) 302, 574
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 2 cut(s) 441, 492
ApeKI GCWGC 3 cut(s) 281, 542, 545
Asp718I GGTACC 2 cut(s) 37, 480
AspS9I GGNCC 1 cut(s) 226
AsuC2I CCSGG 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 277
AsuNHI GCTAGC 1 cut(s) 128
AvaI CYCGRG 1 cut(s) 81
AvaII GGWCC 1 cut(s) 226
BanI GGYRCC 3 cut(s) 37, 480, 557
BanII GRGCYC 2 cut(s) 306, 513
BbsI GAAGAC 1 cut(s) 350
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 3 cut(s) 293, 529, 532
BceAI ACGGC 1 cut(s) 428
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 2 cut(s) 263, 395
BclI TGATCA 1 cut(s) 447
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 173
BfaI CTAG 2 cut(s) 129, 485
BfrI CTTAAG 1 cut(s) 253
BisI GCNGC 3 cut(s) 282, 543, 546
BlsI GCNGC 3 cut(s) 283, 544, 547
Bme1390I CCNGG 3 cut(s) 175, 263, 395
Bme18I GGWCC 1 cut(s) 226
BmeT110I CYCGRG 1 cut(s) 81
BmgT120I GGNCC 1 cut(s) 226
BmiI GGNNCC 6 cut(s) 39, 227, 400, 482, 512, 559
BmrFI CCNGG 3 cut(s) 175, 263, 395
BmsI GCATC 2 cut(s) 84, 420
BmtI GCTAGC 1 cut(s) 132
BpiI GAAGAC 1 cut(s) 350
BplI GAGNNNNNCTC 1 cut(s) 565
BpmI CTGGAG 1 cut(s) 296
BpuEI CTTGAG 1 cut(s) 536
BpuMI CCSGG 1 cut(s) 175
BsaAI YACGTR 1 cut(s) 144
BsaJI CCNNGG 3 cut(s) 261, 394, 549
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 324, 490, 501
Bse118I RCCGGY 2 cut(s) 40, 560
BseBI CCWGG 2 cut(s) 263, 395
BseDI CCNNGG 3 cut(s) 261, 394, 549
BseLI CCNNNNNNNGG 4 cut(s) 34, 324, 490, 501
BseMII CTCAG 1 cut(s) 584
BseRI GAGGAG 1 cut(s) 365
BseXI GCAGC 3 cut(s) 293, 529, 532
BseYI CCCAGC 1 cut(s) 476
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 2 cut(s) 443, 494
BshNI GGYRCC 3 cut(s) 37, 480, 557
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 1 cut(s) 306
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 3 cut(s) 41, 174, 561
BslFI GGGAC 2 cut(s) 239, 243
BslI CCNNNNNNNGG 4 cut(s) 34, 324, 490, 501
BsmAI GTCTC 1 cut(s) 173
BsmFI GGGAC 2 cut(s) 239, 243
BsnI GGCC 2 cut(s) 443, 494
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 306, 513
Bsp143I GATC 5 cut(s) 31, 98, 294, 447, 566
BspACI CCGC 7 cut(s) 59, 223, 315, 338, 505, 535, 579
BspANI GGCC 2 cut(s) 443, 494
BspCNI CTCAG 1 cut(s) 583
BspHI TCATGA 2 cut(s) 450, 583
BspLI GGNNCC 6 cut(s) 39, 227, 400, 482, 512, 559
BspOI GCTAGC 1 cut(s) 132
BspPI GGATC 2 cut(s) 302, 574
BspT107I GGYRCC 3 cut(s) 37, 480, 557
BspTI CTTAAG 1 cut(s) 253
BsrBI CCGCTC 4 cut(s) 223, 338, 535, 581
BsrFI RCCGGY 2 cut(s) 40, 560
BssAI RCCGGY 2 cut(s) 40, 560
BssECI CCNNGG 3 cut(s) 261, 394, 549
BssMI GATC 5 cut(s) 31, 98, 294, 447, 566
BssT1I CCWWGG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 263, 395
Bst4CI ACNGT 1 cut(s) 105
Bst6I CTCTTC 1 cut(s) 303
BstAFI CTTAAG 1 cut(s) 253
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 6, 130
BstDEI CTNAG 1 cut(s) 570
BstEII GGTNACC 1 cut(s) 265
BstENI CCTNNNNNAGG 1 cut(s) 488
BstKTI GATC 5 cut(s) 34, 101, 297, 450, 569
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 5 cut(s) 31, 98, 294, 447, 566
BstMCI CGRYCG 1 cut(s) 34
BstMWI GCNNNNNNNGC 2 cut(s) 125, 430
BstNI CCWGG 2 cut(s) 263, 395
BstNSI RCATGY 1 cut(s) 421
BstPI GGTNACC 1 cut(s) 265
BstSCI CCNGG 3 cut(s) 173, 261, 393
BstSNI TACGTA 1 cut(s) 144
BstV1I GCAGC 3 cut(s) 293, 529, 532
BstV2I GAAGAC 1 cut(s) 350
BstX2I RGATCY 1 cut(s) 566
BstYI RGATCY 1 cut(s) 566
BsuRI GGCC 2 cut(s) 443, 494
BtsIMutI CAGTG 2 cut(s) 89, 101
Cac8I GCNNGC 2 cut(s) 6, 130
CciI TCATGA 2 cut(s) 450, 583
Cfr10I RCCGGY 2 cut(s) 40, 560
Cfr13I GGNCC 1 cut(s) 226
CseI GACGC 2 cut(s) 134, 344
Csp6I GTAC 6 cut(s) 38, 115, 145, 457, 481, 576
CviAII CATG 4 cut(s) 324, 418, 451, 584
CviQI GTAC 6 cut(s) 38, 115, 145, 457, 481, 576
DdeI CTNAG 1 cut(s) 570
DpnI GATC 5 cut(s) 33, 100, 296, 449, 568
DpnII GATC 5 cut(s) 31, 98, 294, 447, 566
Eam1104I CTCTTC 1 cut(s) 303
EarI CTCTTC 1 cut(s) 303
EciI GGCGGA 1 cut(s) 304
Ecl136II GAGCTC 1 cut(s) 304
Eco105I TACGTA 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 549
Eco24I GRGCYC 2 cut(s) 306, 513
Eco47I GGWCC 1 cut(s) 226
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 2 cut(s) 254, 446
Eco88I CYCGRG 1 cut(s) 81
Eco91I GGTNACC 1 cut(s) 265
EcoICRI GAGCTC 1 cut(s) 304
EcoNI CCTNNNNNAGG 1 cut(s) 488
EcoO109I RGGNCCY 1 cut(s) 226
EcoO65I GGTNACC 1 cut(s) 265
EcoRII CCWGG 2 cut(s) 261, 393
EcoT14I CCWWGG 1 cut(s) 549
EcoT38I GRGCYC 2 cut(s) 306, 513
ErhI CCWWGG 1 cut(s) 549
FaeI CATG 4 cut(s) 327, 421, 454, 587
FaiI YATR 5 cut(s) 23, 325, 419, 452, 585
FaqI GGGAC 2 cut(s) 239, 243
FatI CATG 4 cut(s) 323, 417, 450, 583
FauI CCCGC 4 cut(s) 66, 216, 498, 528
FbaI TGATCA 1 cut(s) 447
Fnu4HI GCNGC 3 cut(s) 282, 543, 546
FriOI GRGCYC 2 cut(s) 306, 513
Fsp4HI GCNGC 3 cut(s) 282, 543, 546
FspBI CTAG 2 cut(s) 129, 485
GluI GCNGC 3 cut(s) 282, 543, 546
GsaI CCCAGC 1 cut(s) 480
GsuI CTGGAG 1 cut(s) 296
HaeIII GGCC 2 cut(s) 443, 494
HapII CCGG 3 cut(s) 41, 174, 561
HgaI GACGC 2 cut(s) 134, 344
Hin1II CATG 4 cut(s) 327, 421, 454, 587
HinfI GANTC 4 cut(s) 67, 86, 248, 311
HpaII CCGG 3 cut(s) 41, 174, 561
HphI GGTGA 1 cut(s) 277
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 573
Hpy188III TCNNGA 2 cut(s) 451, 584
Hpy8I GTNNAC 1 cut(s) 115
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 7 cut(s) 10, 40, 196, 211, 235, 322, 523
HpyCH4III ACNGT 1 cut(s) 105
HpyCH4IV ACGT 2 cut(s) 111, 143
HpyCH4V TGCA 2 cut(s) 386, 433
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 430
HpyF3I CTNAG 1 cut(s) 570
HpySE526I ACGT 2 cut(s) 111, 143
Hsp92II CATG 4 cut(s) 327, 421, 454, 587
KpnI GGTACC 2 cut(s) 41, 484
Ksp22I TGATCA 1 cut(s) 447
Kzo9I GATC 5 cut(s) 31, 98, 294, 447, 566
LmnI GCTCC 4 cut(s) 220, 352, 516, 532
Lsp1109I GCAGC 3 cut(s) 293, 529, 532
LweI GCATC 2 cut(s) 84, 420
MaeI CTAG 2 cut(s) 129, 485
MaeII ACGT 2 cut(s) 111, 143
MaeIII GTNAC 1 cut(s) 265
MalI GATC 5 cut(s) 33, 100, 296, 449, 568
MbiI CCGCTC 4 cut(s) 223, 338, 535, 581
MboI GATC 5 cut(s) 31, 98, 294, 447, 566
MflI RGATCY 1 cut(s) 566
MhlI GDGCHC 2 cut(s) 306, 513
MlyI GAGTC 2 cut(s) 257, 320
MmeI TCCRAC 1 cut(s) 192
MnlI CCTC 9 cut(s) 38, 86, 127, 148, 271, 343, 484, 532, 547
MseI TTAA 1 cut(s) 254
MspCI CTTAAG 1 cut(s) 253
MspI CCGG 3 cut(s) 41, 174, 561
MspR9I CCNGG 3 cut(s) 175, 263, 395
MvaI CCWGG 2 cut(s) 263, 395
MwoI GCNNNNNNNGC 2 cut(s) 125, 430
NciI CCSGG 1 cut(s) 175
NdeII GATC 5 cut(s) 31, 98, 294, 447, 566
NheI GCTAGC 1 cut(s) 128
NlaIII CATG 4 cut(s) 327, 421, 454, 587
NlaIV GGNNCC 6 cut(s) 39, 227, 400, 482, 512, 559
NmeAIII GCCGAG 1 cut(s) 325
NmuCI GTSAC 1 cut(s) 265
NspI RCATGY 1 cut(s) 421
PagI TCATGA 2 cut(s) 450, 583
PciI ACATGT 1 cut(s) 417
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 303
PfeI GAWTC 2 cut(s) 67, 86
PflMI CCANNNNNTGG 1 cut(s) 324
PkrI GCNGC 3 cut(s) 283, 544, 547
Ple19I CGATCG 1 cut(s) 34
PleI GAGTC 2 cut(s) 256, 319
PpsI GAGTC 2 cut(s) 256, 319
Ppu21I YACGTR 1 cut(s) 144
PpuMI RGGWCCY 1 cut(s) 226
PscI ACATGT 1 cut(s) 417
Psp124BI GAGCTC 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 226
Psp6I CCWGG 2 cut(s) 261, 393
PspEI GGTNACC 1 cut(s) 265
PspFI CCCAGC 1 cut(s) 476
PspGI CCWGG 2 cut(s) 261, 393
PspN4I GGNNCC 6 cut(s) 39, 227, 400, 482, 512, 559
PspPI GGNCC 1 cut(s) 226
PspPPI RGGWCCY 1 cut(s) 226
PsuI RGATCY 1 cut(s) 566
PvuI CGATCG 1 cut(s) 34
RsaI GTAC 6 cut(s) 39, 116, 146, 458, 482, 577
RsaNI GTAC 6 cut(s) 38, 115, 145, 457, 481, 576
SacI GAGCTC 1 cut(s) 306
SaqAI TTAA 1 cut(s) 254
SatI GCNGC 3 cut(s) 282, 543, 546
Sau3AI GATC 5 cut(s) 31, 98, 294, 447, 566
Sau96I GGNCC 1 cut(s) 226
SchI GAGTC 2 cut(s) 257, 320
ScrFI CCNGG 3 cut(s) 175, 263, 395
SduI GDGCHC 2 cut(s) 306, 513
SfaNI GCATC 2 cut(s) 84, 420
SinI GGWCC 1 cut(s) 226
SmlI CTYRAG 2 cut(s) 253, 515
SmoI CTYRAG 2 cut(s) 253, 515
SnaBI TACGTA 1 cut(s) 144
SsiI CCGC 7 cut(s) 59, 223, 315, 338, 505, 535, 579
SspMI CTAG 2 cut(s) 129, 485
SstI GAGCTC 1 cut(s) 306
StyD4I CCNGG 3 cut(s) 173, 261, 393
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 1 cut(s) 105
TaiI ACGT 2 cut(s) 114, 146
TaqI TCGA 2 cut(s) 30, 306
TaqII GACCGA 1 cut(s) 284
TatI WGTACW 1 cut(s) 456
TfiI GAWTC 2 cut(s) 67, 86
Tru1I TTAA 1 cut(s) 254
Tru9I TTAA 1 cut(s) 254
TscAI CASTG 2 cut(s) 96, 108
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 3 cut(s) 281, 542, 545
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 1 cut(s) 467
TspGWI ACGGA 1 cut(s) 307
TspRI CASTG 2 cut(s) 96, 108
Van91I CCANNNNNTGG 1 cut(s) 324
Vha464I CTTAAG 1 cut(s) 253
VpaK11BI GGWCC 1 cut(s) 226
XagI CCTNNNNNAGG 1 cut(s) 488
XceI RCATGY 1 cut(s) 421
XspI CTAG 2 cut(s) 129, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.