Rmu_sc0029924.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0029924.1
OG0000087
Physical Location & Seq
Reverse (-)
1 .. 2441
2441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0029924.1_g000001.1.cds

Sequence Viewer

Length: 1887 bp
atgaacttctgggtatttatgggttttggcttgaatttctgggttttctgggttttggttaagctaacccttgtgcttctggttccagatatagcaagatttgaggtcctcggtaccgtagttaggatagaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcaagctgaagtggatatcgaccgtcacagtggccattcccgagggcattcagaagccgaggtatacacttgcggatggcaccgtatgcgacgaacccgggagaagtatgacgatgaaggaggtcatcgacatgcgactgaagtgggggataccggacgcggtggagcttatgcctctcagggatggagagatggccgcgaatcctgctccggggtgggtggcgttgcactagaatcagttccaccaagggttatcgctaccgctgcccccgtgcctacagtacctgttggggatgctgaacttgtcaccggggcagttgaccccgaatgccattcgccaactactcagtatgatggctatgtgggacctgtgccaacaaggtcctatactctatccgaagtagaaaggaagaggatagcccgggtatatgccgtttggtcagagaaagagaggagctcttatagattcatcccgcactctatactttataggctagggctagggtggctccccgtgaaagcgccgaaaaggaaaccccggaaaggcaaggaggaggacataatggatgatgctcaattgatggatatgctgatgggccagggagaagacgcccttcacatctatgtcgacctagggtcgaaaggtaccagtcggtccattgaagaaactcttctggagatcactgatgagggatatggtgagcctgaccccgacgctcccgtgacccacgttgcgcagccctccatggccgatgttatcacgatagatgacaccgggatgggaaaagtaccggcccccgtgcctatttcccctcgttccactaggagcgatgaggcactacttcccggtgagaagaagaggtcccataggcaccggcatcagactgataaggaggtgacgtacactggccgagatgttcaaggtattggtgcgaagaggcagaagaaagatcacctgggaccagagtcgtcgcctttgctcggcctgttatctcccgccattccggtaatccctaagaagcccatcaagcagctgctgagtgagtacggggttgccgatgagaagttcgttcggtccatgcttggggatctgaatgatattgacctcgaccgggttcgggccaaagataatactccccaggagaatcgccgtcttgcccgggaatcaatgatgcaggcactcttcaatgtgtacgccattgacgccagcgaggaagatactcatctgaaggaggaggttagcaatctctctgggcaggtgaagtatcttcatggcgagaaggccaagctggagaaagaacaggactcattgagggctgagatggtcgccgccaagcaaaggatcgcggagcttgagggtgaagtcactgaggcgcgggaggaggtaaaaaacgcccgggactccgagaaaaaagctgcagactctgccgtctcatggaaggagaaggcagaccacctggaggatcgccttccagtggagaggcacgaggttgtggaggagtacaagtcctcagacgagctcatctctatgcttgctgctacccaagataaggctgtcattatgaagttcaaggagtgggtggcggccaggtacttagatgaagctaaattcaggcggggtctcctggagaaaaaagaagaaagagcgggaggaggaggccaagtctggtgccggtgggtcccagagtaccggtggcgatcggtt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

629

Amino Acids

70.46

Weight (kDa)

5.87

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1429
AasI GACNNNNNNGTC 1 cut(s) 1610
Acc16I TGCGCA 1 cut(s) 918
Acc36I ACCTGC 1 cut(s) 1429
Acc65I GGTACC 2 cut(s) 113, 827
AccB1I GGYRCC 5 cut(s) 113, 261, 827, 1053, 1851
AccBSI CCGCTC 1 cut(s) 1829
AccI GTMKAC 2 cut(s) 246, 810
AccII CGCG 4 cut(s) 342, 381, 1529, 1558
AclWI GGATC 4 cut(s) 166, 1278, 1532, 1653
AcoI YGGCCR 5 cut(s) 214, 376, 930, 1090, 1767
AcsI RAATTY 2 cut(s) 34, 1790
AcuI CTGAAG 3 cut(s) 210, 342, 1430
AcyI GRCGYC 2 cut(s) 792, 1386
AgeI ACCGGT 1 cut(s) 1872
AgsI TTSAA 5 cut(s) 34, 845, 1103, 1369, 1753
AhdI GACNNNNNGTC 1 cut(s) 817
AjnI CCWGG 8 cut(s) 140, 179, 780, 1137, 1320, 1638, 1769, 1806
Alw21I GWGCWC 2 cut(s) 641, 1704
Alw26I GTCTC 2 cut(s) 1618, 1808
AlwI GGATC 4 cut(s) 166, 1278, 1532, 1653
AlwNI CAGNNNCTG 3 cut(s) 467, 1219, 1607
Ama87I CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
ApeKI GCWGC 6 cut(s) 446, 919, 1213, 1216, 1598, 1718
ApoI RAATTY 2 cut(s) 34, 1790
AsiGI ACCGGT 1 cut(s) 1872
Asp700I GAANNNNTTC 2 cut(s) 420, 852
Asp718I GGTACC 2 cut(s) 113, 827
AspA2I CCTAGG 1 cut(s) 814
AspLEI GCGC 3 cut(s) 706, 919, 1558
AsuHPI GGTGA 7 cut(s) 481, 893, 1043, 1090, 1127, 1453, 1553
AvaI CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
AvaII GGWCC 8 cut(s) 106, 548, 564, 837, 1044, 1142, 1257, 1861
AvrII CCTAGG 1 cut(s) 814
BaeI ACNNNNGTAYC 2 cut(s) 105, 138
BalI TGGCCA 1 cut(s) 216
BanI GGYRCC 5 cut(s) 113, 261, 827, 1053, 1851
BanII GRGCYC 2 cut(s) 641, 1704
BauI CACGAG 1 cut(s) 1667
BbsI GAAGAC 2 cut(s) 165, 795
Bbv12I GWGCWC 2 cut(s) 641, 1704
BbvI GCAGC 6 cut(s) 433, 931, 1203, 1225, 1585, 1705
BccI CCATC 9 cut(s) 252, 360, 368, 530, 757, 769, 955, 1214, 1498
BceAI ACGGC 3 cut(s) 599, 1317, 1595
BciT130I CCWGG 8 cut(s) 142, 181, 782, 1139, 1322, 1640, 1771, 1808
BciVI GTATCC 2 cut(s) 145, 325
BcoDI GTCTC 2 cut(s) 1618, 1808
BfaI CTAG 5 cut(s) 413, 677, 683, 815, 1005
BfmI CTRYAG 2 cut(s) 459, 1599
BfoI RGCGCY 1 cut(s) 707
BfuAI ACCTGC 1 cut(s) 1429
BfuI GTATCC 2 cut(s) 145, 325
BisI GCNGC 9 cut(s) 379, 447, 920, 1214, 1217, 1512, 1599, 1719, 1767
BlnI CCTAGG 1 cut(s) 814
BlsI GCNGC 9 cut(s) 380, 448, 921, 1215, 1218, 1513, 1600, 1720, 1768
Bme18I GGWCC 8 cut(s) 106, 548, 564, 837, 1044, 1142, 1257, 1861
BmeRI GACNNNNNGTC 1 cut(s) 817
BmeT110I CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
BmsI GCATC 4 cut(s) 466, 742, 1069, 1344
BoxI GACNNNNGTC 1 cut(s) 1147
BpiI GAAGAC 2 cut(s) 165, 795
BplI GAGNNNNNCTC 4 cut(s) 623, 655, 1691, 1723
BpmI CTGGAG 4 cut(s) 878, 1493, 1661, 1829
BpuEI CTTGAG 1 cut(s) 1556
BsaBI GATNNNNATC 1 cut(s) 1404
BsaHI GRCGYC 2 cut(s) 792, 1386
BsaI GGTCTC 1 cut(s) 1808
BsaWI WCCGGW 3 cut(s) 335, 1186, 1872
BsaXI ACNNNNNCTCC 6 cut(s) 1067, 1097, 1673, 1703, 1830, 1860
Bse118I RCCGGY 4 cut(s) 973, 1056, 1854, 1872
Bse1I ACTGG 4 cut(s) 169, 831, 1093, 1655
Bse8I GATNNNNATC 1 cut(s) 1404
BseBI CCWGG 8 cut(s) 142, 181, 782, 1139, 1322, 1640, 1771, 1808
BseGI GGATG 6 cut(s) 263, 371, 481, 651, 754, 966
BseJI GATNNNNATC 1 cut(s) 1404
BseMII CTCAG 6 cut(s) 374, 542, 1211, 1491, 1542, 1707
BseNI ACTGG 4 cut(s) 169, 831, 1093, 1655
BseRI GAGGAG 7 cut(s) 649, 749, 1430, 1577, 1694, 1848, 1851
BseXI GCAGC 6 cut(s) 433, 931, 1203, 1225, 1585, 1705
Bsh1236I CGCG 4 cut(s) 342, 381, 1529, 1558
Bsh1285I CGRYCG 3 cut(s) 205, 1294, 1883
BshNI GGYRCC 5 cut(s) 113, 261, 827, 1053, 1851
BshTI ACCGGT 1 cut(s) 1872
BsiEI CGRYCG 3 cut(s) 205, 1294, 1883
BsiHKAI GWGCWC 2 cut(s) 641, 1704
BsiHKCI CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
BslFI GGGAC 5 cut(s) 561, 1030, 1155, 1595, 1847
BsmAI GTCTC 2 cut(s) 1618, 1808
BsmBI CGTCTC 1 cut(s) 1618
BsmFI GGGAC 5 cut(s) 561, 1030, 1155, 1595, 1847
BsmI GAATGC 2 cut(s) 229, 515
Bso31I GGTCTC 1 cut(s) 1808
BsoBI CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
Bsp1286I GDGCHC 2 cut(s) 641, 1704
Bsp143I GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
Bsp19I CCATGG 1 cut(s) 927
BspCNI CTCAG 6 cut(s) 373, 541, 1212, 1492, 1543, 1706
BspFNI CGCG 4 cut(s) 342, 381, 1529, 1558
BspMAI CTGCAG 1 cut(s) 1603
BspMI ACCTGC 1 cut(s) 1429
BspPI GGATC 4 cut(s) 166, 1278, 1532, 1653
BspT107I GGYRCC 5 cut(s) 113, 261, 827, 1053, 1851
BspTNI GGTCTC 1 cut(s) 1808
BsrBI CCGCTC 1 cut(s) 1829
BsrFI RCCGGY 4 cut(s) 973, 1056, 1854, 1872
BsrI ACTGG 4 cut(s) 169, 831, 1093, 1655
BssAI RCCGGY 4 cut(s) 973, 1056, 1854, 1872
BssMI GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
BssNAI GTATAC 1 cut(s) 247
BssNI GRCGYC 2 cut(s) 792, 1386
BssSI CACGAG 1 cut(s) 1667
BssT1I CCWWGG 3 cut(s) 428, 814, 927
Bst1107I GTATAC 1 cut(s) 247
Bst2BI CACGAG 1 cut(s) 1667
Bst2UI CCWGG 8 cut(s) 142, 181, 782, 1139, 1322, 1640, 1771, 1808
Bst4CI ACNGT 5 cut(s) 118, 206, 212, 266, 463
Bst6I CTCTTC 5 cut(s) 587, 858, 1034, 1112, 1370
BstACI GRCGYC 2 cut(s) 792, 1386
BstAPI GCANNNNNTGC 2 cut(s) 268, 1607
BstC8I GCNNGC 4 cut(s) 186, 1359, 1390, 1716
BstDEI CTNAG 8 cut(s) 360, 528, 1197, 1220, 1500, 1551, 1693, 1777
BstDSI CCRYGG 1 cut(s) 927
BstF5I GGATG 6 cut(s) 263, 371, 481, 651, 754, 966
BstFNI CGCG 4 cut(s) 342, 381, 1529, 1558
BstH2I RGCGCY 1 cut(s) 707
BstHHI GCGC 3 cut(s) 706, 919, 1558
BstKTI GATC 7 cut(s) 161, 864, 1135, 1273, 1527, 1648, 1883
BstMAI GTCTC 2 cut(s) 1618, 1808
BstMBI GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
BstMCI CGRYCG 3 cut(s) 205, 1294, 1883
BstMWI GCNNNNNNNGC 8 cut(s) 185, 268, 387, 446, 688, 1210, 1385, 1607
BstNI CCWGG 8 cut(s) 142, 181, 782, 1139, 1322, 1640, 1771, 1808
BstNSI RCATGY 1 cut(s) 317
BstPAI GACNNNNGTC 1 cut(s) 1147
BstSFI CTRYAG 2 cut(s) 459, 1599
BstUI CGCG 4 cut(s) 342, 381, 1529, 1558
BstV1I GCAGC 6 cut(s) 433, 931, 1203, 1225, 1585, 1705
BstV2I GAAGAC 2 cut(s) 165, 795
BstX2I RGATCY 1 cut(s) 1270
BstYI RGATCY 1 cut(s) 1270
BstZ17I GTATAC 1 cut(s) 247
BsuI GTATCC 2 cut(s) 145, 325
BtgI CCRYGG 1 cut(s) 927
BtgZI GCGATG 1 cut(s) 1026
BtsCI GGATG 6 cut(s) 263, 371, 481, 651, 754, 966
BtsIMutI CAGTG 5 cut(s) 217, 864, 1086, 1548, 1662
BveI ACCTGC 1 cut(s) 1429
Cac8I GCNNGC 4 cut(s) 186, 1359, 1390, 1716
CaiI CAGNNNCTG 3 cut(s) 467, 1219, 1607
CfoI GCGC 3 cut(s) 706, 919, 1558
Cfr10I RCCGGY 4 cut(s) 973, 1056, 1854, 1872
Cfr9I CCCGGG 4 cut(s) 279, 603, 1341, 1578
CseI GACGC 4 cut(s) 348, 800, 905, 1394
CspAI ACCGGT 1 cut(s) 1872
CviAII CATG 5 cut(s) 314, 928, 1261, 1454, 1617
DdeI CTNAG 8 cut(s) 360, 528, 1197, 1220, 1500, 1551, 1693, 1777
DpnI GATC 7 cut(s) 160, 863, 1134, 1272, 1526, 1647, 1882
DpnII GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
DrdI GACNNNNNNGTC 1 cut(s) 1610
DriI GACNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 1610
EaeI YGGCCR 5 cut(s) 214, 376, 930, 1090, 1767
Eam1104I CTCTTC 5 cut(s) 587, 858, 1034, 1112, 1370
Eam1105I GACNNNNNGTC 1 cut(s) 817
EarI CTCTTC 5 cut(s) 587, 858, 1034, 1112, 1370
Ecl136II GAGCTC 2 cut(s) 639, 1702
Eco130I CCWWGG 3 cut(s) 428, 814, 927
Eco24I GRGCYC 2 cut(s) 641, 1704
Eco31I GGTCTC 1 cut(s) 1808
Eco32I GATATC 1 cut(s) 199
Eco47I GGWCC 8 cut(s) 106, 548, 564, 837, 1044, 1142, 1257, 1861
Eco53kI GAGCTC 2 cut(s) 639, 1702
Eco57I CTGAAG 3 cut(s) 210, 342, 1430
Eco88I CYCGRG 5 cut(s) 222, 279, 603, 1341, 1578
EcoICRI GAGCTC 2 cut(s) 639, 1702
EcoO109I RGGNCCY 5 cut(s) 106, 548, 564, 1044, 1861
EcoRII CCWGG 8 cut(s) 140, 179, 780, 1137, 1320, 1638, 1769, 1806
EcoRV GATATC 1 cut(s) 199
EcoT14I CCWWGG 3 cut(s) 428, 814, 927
EcoT38I GRGCYC 2 cut(s) 641, 1704
ErhI CCWWGG 3 cut(s) 428, 814, 927
Esp3I CGTCTC 1 cut(s) 1618
FaeI CATG 5 cut(s) 317, 931, 1264, 1457, 1620
FalI AAGNNNNNCTT 4 cut(s) 780, 812, 837, 869
FaqI GGGAC 5 cut(s) 561, 1030, 1155, 1595, 1847
FatI CATG 5 cut(s) 313, 927, 1260, 1453, 1616
FauI CCCGC 5 cut(s) 663, 1186, 1551, 1791, 1822
FblI GTMKAC 2 cut(s) 246, 810
Fnu4HI GCNGC 9 cut(s) 379, 447, 920, 1214, 1217, 1512, 1599, 1719, 1767
FokI GGATG 6 cut(s) 270, 378, 488, 638, 761, 973
FriOI GRGCYC 2 cut(s) 641, 1704
Fsp4HI GCNGC 9 cut(s) 379, 447, 920, 1214, 1217, 1512, 1599, 1719, 1767
FspBI CTAG 5 cut(s) 413, 677, 683, 815, 1005
FspI TGCGCA 1 cut(s) 918
GlaI GCGC 3 cut(s) 705, 918, 1557
GluI GCNGC 9 cut(s) 379, 447, 920, 1214, 1217, 1512, 1599, 1719, 1767
GsuI CTGGAG 4 cut(s) 878, 1493, 1661, 1829
HaeII RGCGCY 1 cut(s) 707
HgaI GACGC 4 cut(s) 348, 800, 905, 1394
HhaI GCGC 3 cut(s) 706, 919, 1558
Hin1I GRCGYC 2 cut(s) 792, 1386
Hin1II CATG 5 cut(s) 317, 931, 1264, 1457, 1620
Hin6I GCGC 3 cut(s) 704, 917, 1556
HinP1I GCGC 3 cut(s) 704, 917, 1556
HincII GTYRAC 2 cut(s) 502, 811
HindII GTYRAC 2 cut(s) 502, 811
HphI GGTGA 7 cut(s) 481, 893, 1043, 1090, 1127, 1453, 1553
Hpy166II GTNNAC 5 cut(s) 247, 502, 811, 1086, 1375
Hpy188I TCNGA 9 cut(s) 136, 235, 580, 625, 1065, 1275, 1410, 1588, 1696
Hpy188III TCNNGA 4 cut(s) 86, 222, 857, 943
Hpy8I GTNNAC 5 cut(s) 247, 502, 811, 1086, 1375
Hpy99I CGWCG 4 cut(s) 166, 276, 899, 1156
HpyAV CCTTC 7 cut(s) 293, 806, 1405, 1456, 1615, 1621, 1661
HpyCH4III ACNGT 5 cut(s) 118, 206, 212, 266, 463
HpyCH4IV ACGT 2 cut(s) 912, 1082
HpyCH4V TGCA 3 cut(s) 410, 1357, 1601
HpyF10VI GCNNNNNNNGC 8 cut(s) 185, 268, 387, 446, 688, 1210, 1385, 1607
HpyF3I CTNAG 8 cut(s) 360, 528, 1197, 1220, 1500, 1551, 1693, 1777
HpySE526I ACGT 2 cut(s) 912, 1082
Hsp92I GRCGYC 2 cut(s) 792, 1386
Hsp92II CATG 5 cut(s) 317, 931, 1264, 1457, 1620
HspAI GCGC 3 cut(s) 704, 917, 1556
KflI GGGWCCC 1 cut(s) 1861
KpnI GGTACC 2 cut(s) 117, 831
Kzo9I GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
LmnI GCTCC 7 cut(s) 347, 395, 636, 696, 904, 1008, 1531
Lsp1109I GCAGC 6 cut(s) 433, 931, 1203, 1225, 1585, 1705
LweI GCATC 4 cut(s) 466, 742, 1069, 1344
MaeI CTAG 5 cut(s) 413, 677, 683, 815, 1005
MaeII ACGT 2 cut(s) 912, 1082
MaeIII GTNAC 5 cut(s) 206, 487, 904, 1078, 1546
MalI GATC 7 cut(s) 160, 863, 1134, 1272, 1526, 1647, 1882
MbiI CCGCTC 1 cut(s) 1829
MboI GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
MfeI CAATTG 1 cut(s) 758
MflI RGATCY 1 cut(s) 1270
MhlI GDGCHC 2 cut(s) 641, 1704
MlsI TGGCCA 1 cut(s) 216
MluCI AATT 3 cut(s) 34, 758, 1790
MluNI TGGCCA 1 cut(s) 216
MlyI GAGTC 4 cut(s) 1157, 1481, 1577, 1598
Mox20I TGGCCA 1 cut(s) 216
MroXI GAANNNNTTC 2 cut(s) 420, 852
MscI TGGCCA 1 cut(s) 216
MseI TTAA 1 cut(s) 60
MslI CAYNNNNRTG 4 cut(s) 312, 804, 959, 1709
Msp20I TGGCCA 1 cut(s) 216
MspA1I CMGCKG 2 cut(s) 446, 1216
MunI CAATTG 1 cut(s) 758
Mva1269I GAATGC 2 cut(s) 229, 515
MvaI CCWGG 8 cut(s) 142, 181, 782, 1139, 1322, 1640, 1771, 1808
MvnI CGCG 4 cut(s) 342, 381, 1529, 1558
MwoI GCNNNNNNNGC 8 cut(s) 185, 268, 387, 446, 688, 1210, 1385, 1607
NcoI CCATGG 1 cut(s) 927
NdeII GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
NlaIII CATG 5 cut(s) 317, 931, 1264, 1457, 1620
NmeAIII GCCGAG 3 cut(s) 265, 1118, 1143
NmuCI GTSAC 5 cut(s) 206, 487, 904, 1078, 1546
NsbI TGCGCA 1 cut(s) 918
NspI RCATGY 1 cut(s) 317
PaqCI CACCTGC 1 cut(s) 1429
PcsI WCGNNNNNNNCGW 2 cut(s) 161, 1236
PctI GAATGC 2 cut(s) 229, 515
PdmI GAANNNNTTC 2 cut(s) 420, 852
PfeI GAWTC 6 cut(s) 131, 383, 416, 648, 1327, 1346
PfoI TCCNGGA 1 cut(s) 1806
PinAI ACCGGT 1 cut(s) 1872
PkrI GCNGC 9 cut(s) 380, 448, 921, 1215, 1218, 1513, 1600, 1720, 1768
Ple19I CGATCG 1 cut(s) 1883
PleI GAGTC 4 cut(s) 1156, 1481, 1577, 1598
PpsI GAGTC 4 cut(s) 1156, 1481, 1577, 1598
PpuMI RGGWCCY 5 cut(s) 106, 548, 564, 1044, 1861
PshAI GACNNNNGTC 1 cut(s) 1147
Psp124BI GAGCTC 2 cut(s) 641, 1704
Psp5II RGGWCCY 5 cut(s) 106, 548, 564, 1044, 1861
Psp6I CCWGG 8 cut(s) 140, 179, 780, 1137, 1320, 1638, 1769, 1806
PspGI CCWGG 8 cut(s) 140, 179, 780, 1137, 1320, 1638, 1769, 1806
PspPPI RGGWCCY 5 cut(s) 106, 548, 564, 1044, 1861
PstI CTGCAG 1 cut(s) 1603
PstNI CAGNNNCTG 3 cut(s) 467, 1219, 1607
PsuI RGATCY 1 cut(s) 1270
PvuI CGATCG 1 cut(s) 1883
PvuII CAGCTG 1 cut(s) 1216
RseI CAYNNNNRTG 4 cut(s) 312, 804, 959, 1709
SacI GAGCTC 2 cut(s) 641, 1704
SalI GTCGAC 1 cut(s) 809
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 9 cut(s) 379, 447, 920, 1214, 1217, 1512, 1599, 1719, 1767
Sau3AI GATC 7 cut(s) 158, 861, 1132, 1270, 1524, 1645, 1880
SchI GAGTC 4 cut(s) 1157, 1481, 1577, 1598
SduI GDGCHC 2 cut(s) 641, 1704
SfaNI GCATC 4 cut(s) 466, 742, 1069, 1344
SfcI CTRYAG 2 cut(s) 459, 1599
SinI GGWCC 8 cut(s) 106, 548, 564, 837, 1044, 1142, 1257, 1861
SmaI CCCGGG 4 cut(s) 281, 605, 1343, 1580
SmiMI CAYNNNNRTG 4 cut(s) 312, 804, 959, 1709
SmlI CTYRAG 1 cut(s) 1535
SmoI CTYRAG 1 cut(s) 1535
Sse9I AATT 3 cut(s) 34, 758, 1790
SspMI CTAG 5 cut(s) 413, 677, 683, 815, 1005
SstI GAGCTC 2 cut(s) 641, 1704
StyI CCWWGG 3 cut(s) 428, 814, 927
TaaI ACNGT 5 cut(s) 118, 206, 212, 266, 463
TaiI ACGT 2 cut(s) 915, 1085
TaqI TCGA 5 cut(s) 201, 310, 810, 821, 1290
TaqII GACCGA 2 cut(s) 825, 1245
TasI AATT 3 cut(s) 34, 758, 1790
TatI WGTACW 1 cut(s) 1683
TauI GCSGC 3 cut(s) 381, 1514, 1769
TfiI GAWTC 6 cut(s) 131, 383, 416, 648, 1327, 1346
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TscAI CASTG 5 cut(s) 217, 871, 1093, 1555, 1662
TseFI GTSAC 5 cut(s) 206, 487, 904, 1078, 1546
TseI GCWGC 6 cut(s) 446, 919, 1213, 1216, 1598, 1718
Tsp45I GTSAC 5 cut(s) 206, 487, 904, 1078, 1546
TspDTI ATGAA 6 cut(s) 17, 312, 640, 1442, 1760, 1797
TspMI CCCGGG 4 cut(s) 279, 603, 1341, 1578
TspRI CASTG 5 cut(s) 217, 871, 1093, 1555, 1662
VpaK11BI GGWCC 8 cut(s) 106, 548, 564, 837, 1044, 1142, 1257, 1861
XapI RAATTY 2 cut(s) 34, 1790
XceI RCATGY 1 cut(s) 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 1872
XmaI CCCGGG 4 cut(s) 279, 603, 1341, 1578
XmaJI CCTAGG 1 cut(s) 814
XmiI GTMKAC 2 cut(s) 246, 810
XmnI GAANNNNTTC 2 cut(s) 420, 852
XspI CTAG 5 cut(s) 413, 677, 683, 815, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.