Rmu_sc0000077.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000077.1
OG0000087
Physical Location & Seq
Reverse (-)
7070 .. 7818
749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000077.1_g000002.1.cds

Sequence Viewer

Length: 687 bp
atggaatcagaagccaggggtggggatacgggatcgtcgtaccagtcttctgccaggcgagctgaaatggacatcgaccggtacctaggccgggtagaccaattagcggagaacacagggtcctcgactggggtgttctcggagagtagtggggagtccgacgagggtgagagcgagggtggatctgcggaggccgcggtagttaccgtggccattcctgagggcattccgaagccaaggtacacacttgtggacgggaccgtatgcgatgaacttgggagaagcatgacgatgaaggagatagtagacatgcggctgaagtggggcataccggacgtagtagagcttaggcctcttagggatggggaactggccgcaaatcctgccccggggtgggtggcgctgcacgagaatcagctccaccaagggttatcgctacccctgccccggtgcctacagtatctgctgcggatgctgaacctgtcaccggagcagctaaccccgaatgccgttcgccaaatatacagtatgatggcaatgtgggacctgtgccagcaagggtggccttccataaatgagttccgcgcgggattacgagccgctagttaccgatatgcctacctcgatgagcaaaaggtggaggaacaaagtgttcctagctggtgggcggtggcagataaaaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

228

Amino Acids

25.24

Weight (kDa)

4.69

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000087)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28970 FvH4_2g03432 FvH4_2g17701 FvH4_4g10000 FvH4_4g15481 FvH4_4g15603 FvH4_6g16061 FvH4_6g25501
rosa_chinensis RchiOBHm_Chr2g0137471 RchiOBHm_Chr5g0054331
rosa_laevigata RLG00000019477 RLG00000022653 RLG00000029242
rosa_multiflora Rmu_co8012786.1_g000001 Rmu_co8165502.1_g000001 Rmu_co8383963.1_g000001 Rmu_co8428657.1_g000002 Rmu_co8441559.1_g000002 Rmu_co8493267.1_g000002 Rmu_co8512765.1_g000001 Rmu_co8522487.1_g000001 Rmu_sc0000045.1_g000034 Rmu_sc0000077.1_g000002 Rmu_sc0000177.1_g000003 Rmu_sc0000194.1_g000003 Rmu_sc0000239.1_g000073 Rmu_sc0000265.1_g000006 Rmu_sc0000271.1_g000031 Rmu_sc0000276.1_g000021 Rmu_sc0000279.1_g000008 Rmu_sc0000280.1_g000017 Rmu_sc0000315.1_g000047 Rmu_sc0000381.1_g000029 Rmu_sc0000423.1_g000013 Rmu_sc0000455.1_g000020 Rmu_sc0000596.1_g000032 Rmu_sc0000605.1_g000020 Rmu_sc0000643.1_g000006 Rmu_sc0000676.1_g000028 Rmu_sc0000698.1_g000063 Rmu_sc0000698.1_g000064 Rmu_sc0000706.1_g000030 Rmu_sc0000744.1_g000078 Rmu_sc0000744.1_g000098 Rmu_sc0000779.1_g000016 Rmu_sc0000808.1_g000006 Rmu_sc0000830.1_g000044 Rmu_sc0000842.1_g000021 Rmu_sc0000883.1_g000019 Rmu_sc0000904.1_g000013 Rmu_sc0000924.1_g000001 Rmu_sc0000959.1_g000012 Rmu_sc0001045.1_g000005 Rmu_sc0001069.1_g000021 Rmu_sc0001107.1_g000001 Rmu_sc0001155.1_g000006 Rmu_sc0001244.1_g000023 Rmu_sc0001302.1_g000017 Rmu_sc0001382.1_g000007 Rmu_sc0001393.1_g000026 Rmu_sc0001436.1_g000015 Rmu_sc0001464.1_g000021 Rmu_sc0001477.1_g000001 Rmu_sc0001483.1_g000024 Rmu_sc0001483.1_g000026 Rmu_sc0001499.1_g000020 Rmu_sc0001518.1_g000001 Rmu_sc0001520.1_g000003 Rmu_sc0001522.1_g000020 Rmu_sc0001529.1_g000008 Rmu_sc0001554.1_g000016 Rmu_sc0001563.1_g000018 Rmu_sc0001565.1_g000024 Rmu_sc0001578.1_g000014 Rmu_sc0001611.1_g000003 Rmu_sc0001700.1_g000026 Rmu_sc0001849.1_g000075 Rmu_sc0001866.1_g000011 Rmu_sc0001898.1_g000013 Rmu_sc0002029.1_g000007 Rmu_sc0002082.1_g000055 Rmu_sc0002206.1_g000032 Rmu_sc0002253.1_g000031 Rmu_sc0002264.1_g000020 Rmu_sc0002414.1_g000024 Rmu_sc0002451.1_g000063 Rmu_sc0002490.1_g000015 Rmu_sc0002539.1_g000010 Rmu_sc0002545.1_g000060 Rmu_sc0002564.1_g000020 Rmu_sc0002584.1_g000062 Rmu_sc0002669.1_g000034 Rmu_sc0002669.1_g000035 Rmu_sc0002690.1_g000010 Rmu_sc0002764.1_g000070 Rmu_sc0002786.1_g000006 Rmu_sc0002804.1_g000013 Rmu_sc0002868.1_g000015 Rmu_sc0002868.1_g000055 Rmu_sc0002889.1_g000039 Rmu_sc0002892.1_g000070 Rmu_sc0002926.1_g000001 Rmu_sc0002986.1_g000063 Rmu_sc0003032.1_g000023 Rmu_sc0003033.1_g000059 Rmu_sc0003063.1_g000022 Rmu_sc0003079.1_g000001 Rmu_sc0003092.1_g000012 Rmu_sc0003244.1_g000013 Rmu_sc0003276.1_g000004 Rmu_sc0003328.1_g000003 Rmu_sc0003352.1_g000034 Rmu_sc0003352.1_g000035 Rmu_sc0003419.1_g000038 Rmu_sc0003551.1_g000015 Rmu_sc0003669.1_g000036 Rmu_sc0003760.1_g000029 Rmu_sc0003781.1_g000021 Rmu_sc0003865.1_g000002 Rmu_sc0004012.1_g000010 Rmu_sc0004140.1_g000028 Rmu_sc0004152.1_g000002 Rmu_sc0004303.1_g000009 Rmu_sc0004336.1_g000039 Rmu_sc0004365.1_g000012 Rmu_sc0004365.1_g000013 Rmu_sc0004379.1_g000010 Rmu_sc0004529.1_g000017 Rmu_sc0004529.1_g000018 Rmu_sc0004536.1_g000025 Rmu_sc0004574.1_g000019 Rmu_sc0004602.1_g000042 Rmu_sc0004836.1_g000018 Rmu_sc0004841.1_g000037 Rmu_sc0004903.1_g000006 Rmu_sc0004977.1_g000006 Rmu_sc0005137.1_g000025 Rmu_sc0005292.1_g000031 Rmu_sc0005292.1_g000032 Rmu_sc0005353.1_g000014 Rmu_sc0005406.1_g000005 Rmu_sc0005469.1_g000016 Rmu_sc0005506.1_g000003 Rmu_sc0005507.1_g000003 Rmu_sc0005629.1_g000006 Rmu_sc0005664.1_g000033 Rmu_sc0005665.1_g000042 Rmu_sc0005685.1_g000003 Rmu_sc0006375.1_g000004 Rmu_sc0006444.1_g000020 Rmu_sc0006453.1_g000012 Rmu_sc0006676.1_g000013 Rmu_sc0006934.1_g000001 Rmu_sc0006945.1_g000001 Rmu_sc0006945.1_g000006 Rmu_sc0006954.1_g000015 Rmu_sc0007102.1_g000012 Rmu_sc0007144.1_g000007 Rmu_sc0007144.1_g000008 Rmu_sc0007230.1_g000003 Rmu_sc0007415.1_g000040 Rmu_sc0007729.1_g000001 Rmu_sc0007920.1_g000017 Rmu_sc0008058.1_g000023 Rmu_sc0008199.1_g000008 Rmu_sc0008232.1_g000010 Rmu_sc0008232.1_g000011 Rmu_sc0008336.1_g000011 Rmu_sc0008581.1_g000007 Rmu_sc0008623.1_g000002 Rmu_sc0009255.1_g000007 Rmu_sc0009479.1_g000008 Rmu_sc0009483.1_g000001 Rmu_sc0009641.1_g000001 Rmu_sc0009660.1_g000003 Rmu_sc0009978.1_g000010 Rmu_sc0010048.1_g000009 Rmu_sc0010547.1_g000007 Rmu_sc0010988.1_g000006 Rmu_sc0011148.1_g000003 Rmu_sc0011203.1_g000010 Rmu_sc0011375.1_g000004 Rmu_sc0011375.1_g000005 Rmu_sc0011559.1_g000005 Rmu_sc0012199.1_g000001 Rmu_sc0013224.1_g000005 Rmu_sc0013931.1_g000004 Rmu_sc0013931.1_g000005 Rmu_sc0013985.1_g000006 Rmu_sc0014406.1_g000001 Rmu_sc0014463.1_g000002 Rmu_sc0016218.1_g000005 Rmu_sc0019345.1_g000002 Rmu_sc0019655.1_g000001 Rmu_sc0020833.1_g000001 Rmu_sc0024204.1_g000001 Rmu_sc0024309.1_g000001 Rmu_sc0027177.1_g000002 Rmu_sc0027778.1_g000002 Rmu_sc0028215.1_g000001 Rmu_sc0029924.1_g000001 Rmu_sc0032552.1_g000001 Rmu_sc0036156.1_g000001 Rmu_sc0037073.1_g000001 Rmu_sc0040495.1_g000001 Rmu_ssc0000255.1_g000056 Rmu_ssc0000309.1_g000006 Rmu_ssc0000312.1_g000005 Rmu_ssc0000371.1_g000021 Rmu_ssc0000372.1_g000010 Rmu_ssc0000372.1_g000011 Rmu_ssc0000372.1_g000069 Rmu_ssc0000386.1_g000005 Rmu_ssc0000386.1_g000006 Rmu_ssc0000443.1_g000032
rosa_roxburghii Rroxscaffold_154G00447940 Rroxscaffold_1G00009660 Rroxscaffold_1G00016990 Rroxscaffold_1G00021370 Rroxscaffold_1G00037860 Rroxscaffold_2G00101680 Rroxscaffold_2G00101690 Rroxscaffold_2G00122690 Rroxscaffold_2G00122700 Rroxscaffold_2G00123340 Rroxscaffold_2G00123350 Rroxscaffold_2G00125480 Rroxscaffold_2G00136130 Rroxscaffold_2G00146590 Rroxscaffold_3G00218350 Rroxscaffold_3G00218360 Rroxscaffold_3G00218370 Rroxscaffold_3G00218380 Rroxscaffold_3G00232530 Rroxscaffold_3G00262600 Rroxscaffold_3G00263070 Rroxscaffold_4G00289030 Rroxscaffold_4G00296530 Rroxscaffold_4G00306140 Rroxscaffold_4G00306150 Rroxscaffold_4G00306380 Rroxscaffold_4G00306390 Rroxscaffold_4G00306400 Rroxscaffold_4G00309560 Rroxscaffold_4G00316600 Rroxscaffold_4G00322820 Rroxscaffold_4G00322830 Rroxscaffold_4G00324370 Rroxscaffold_4G00332350 Rroxscaffold_5G00346450 Rroxscaffold_5G00352960 Rroxscaffold_5G00352970 Rroxscaffold_5G00360310 Rroxscaffold_5G00373670 Rroxscaffold_5G00378610 Rroxscaffold_5G00378940 Rroxscaffold_6G00388240 Rroxscaffold_6G00389010 Rroxscaffold_6G00389030 Rroxscaffold_6G00399900 Rroxscaffold_6G00399910 Rroxscaffold_6G00400260 Rroxscaffold_6G00400270 Rroxscaffold_6G00400280 Rroxscaffold_7G00164100 Rroxscaffold_7G00176300 Rroxscaffold_7G00176310 Rroxscaffold_7G00177210 Rroxscaffold_7G00204300 Rroxscaffold_7G00204310 Rroxscaffold_7G00204320
rosa_rugosa Rorug06G0076500
rosa_samantha Rh1AG108400 Rh2AG377100 Rh2AG377200 Rh2BG383500 Rh2CG362800 Rh2DG399900 Rh2DG439600 Rh2DG672800 Rh6DG186300 Rh7AG351400 Rh7BG368500 Rh7CG368800 Rh7CG411100 Rh7DG424400
rosa_wichuraiana Rw1G021100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 81
AccB1I GGYRCC 2 cut(s) 81, 450
AccI GTMKAC 2 cut(s) 96, 306
AccII CGCG 3 cut(s) 197, 585, 587
AclWI GGATC 2 cut(s) 40, 190
AcoI YGGCCR 2 cut(s) 210, 372
AcuI CTGAAG 1 cut(s) 338
AfaI GTAC 3 cut(s) 41, 83, 242
AfiI CCNNNNNNNGG 9 cut(s) 21, 91, 106, 129, 389, 393, 394, 447, 487
AgeI ACCGGT 1 cut(s) 78
AjnI CCWGG 2 cut(s) 14, 53
AleI CACNNNNGTG 1 cut(s) 248
AloI GAACNNNNNNTCC 2 cut(s) 104, 136
AluBI AGCT 5 cut(s) 62, 346, 418, 496, 660
AluI AGCT 5 cut(s) 62, 346, 418, 496, 660
AlwI GGATC 2 cut(s) 40, 190
AlwNI CAGNNNCTG 1 cut(s) 463
Ama87I CYCGRG 1 cut(s) 388
AoxI GGCC 6 cut(s) 88, 192, 210, 350, 372, 563
ApeKI GCWGC 3 cut(s) 403, 466, 493
AsiGI ACCGGT 1 cut(s) 78
Asp718I GGTACC 1 cut(s) 81
AspA2I CCTAGG 1 cut(s) 85
AspLEI GCGC 2 cut(s) 403, 587
AspS9I GGNCC 3 cut(s) 120, 258, 544
AsuC2I CCSGG 4 cut(s) 92, 389, 390, 448
AsuHPI GGTGA 2 cut(s) 179, 477
AvaI CYCGRG 1 cut(s) 388
AvaII GGWCC 3 cut(s) 120, 258, 544
AvrII CCTAGG 1 cut(s) 85
AxyI CCTNAGG 1 cut(s) 219
BalI TGGCCA 1 cut(s) 212
BanI GGYRCC 2 cut(s) 81, 450
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 390, 453, 505
BccI CCATC 2 cut(s) 356, 526
BceAI ACGGC 1 cut(s) 494
BciT130I CCWGG 2 cut(s) 16, 55
BciVI GTATCC 1 cut(s) 19
BcnI CCSGG 4 cut(s) 92, 389, 390, 448
BfaI CTAG 3 cut(s) 86, 603, 657
BfmI CTRYAG 1 cut(s) 455
BfoI RGCGCY 1 cut(s) 404
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 7 cut(s) 195, 314, 375, 404, 467, 494, 600
BlnI CCTAGG 1 cut(s) 85
BlsI GCNGC 7 cut(s) 196, 315, 376, 405, 468, 495, 601
Bme1390I CCNGG 6 cut(s) 16, 55, 92, 389, 390, 448
Bme18I GGWCC 3 cut(s) 120, 258, 544
BmeT110I CYCGRG 1 cut(s) 388
BmgT120I GGNCC 3 cut(s) 120, 258, 544
BmiI GGNNCC 5 cut(s) 83, 121, 259, 452, 545
BmrFI CCNGG 6 cut(s) 16, 55, 92, 389, 390, 448
BmrI ACTGGG 1 cut(s) 138
BmsI GCATC 1 cut(s) 462
BmuI ACTGGG 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 39
Bpu10I CCTNAGC 1 cut(s) 347
BpuMI CCSGG 4 cut(s) 92, 389, 390, 448
BsaWI WCCGGW 3 cut(s) 78, 331, 487
Bsc4I CCNNNNNNNGG 9 cut(s) 21, 91, 106, 129, 389, 393, 394, 447, 487
Bse118I RCCGGY 1 cut(s) 78
Bse1I ACTGG 3 cut(s) 43, 133, 375
Bse21I CCTNAGG 1 cut(s) 219
Bse3DI GCAATG 1 cut(s) 543
BseBI CCWGG 2 cut(s) 16, 55
BseGI GGATG 2 cut(s) 367, 477
BseLI CCNNNNNNNGG 9 cut(s) 21, 91, 106, 129, 389, 393, 394, 447, 487
BseMI GCAATG 1 cut(s) 543
BseMII CTCAG 1 cut(s) 210
BseNI ACTGG 3 cut(s) 43, 133, 375
BseXI GCAGC 3 cut(s) 390, 453, 505
BsgI GTGCAG 1 cut(s) 389
Bsh1236I CGCG 3 cut(s) 197, 585, 587
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 6 cut(s) 90, 194, 212, 352, 374, 565
BshNI GGYRCC 2 cut(s) 81, 450
BshTI ACCGGT 1 cut(s) 78
BsiEI CGRYCG 1 cut(s) 79
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 6 cut(s) 79, 91, 332, 389, 448, 488
BslFI GGGAC 2 cut(s) 271, 557
BslI CCNNNNNNNGG 9 cut(s) 21, 91, 106, 129, 389, 393, 394, 447, 487
BsmFI GGGAC 2 cut(s) 271, 557
BsmI GAATGC 2 cut(s) 225, 511
BsnI GGCC 6 cut(s) 90, 194, 212, 352, 374, 565
BsoBI CYCGRG 1 cut(s) 388
Bsp143I GATC 2 cut(s) 32, 182
BspANI GGCC 6 cut(s) 90, 194, 212, 352, 374, 565
BspCNI CTCAG 1 cut(s) 211
BspFNI CGCG 3 cut(s) 197, 585, 587
BspLI GGNNCC 5 cut(s) 83, 121, 259, 452, 545
BspPI GGATC 2 cut(s) 40, 190
BspT107I GGYRCC 2 cut(s) 81, 450
BsrDI GCAATG 1 cut(s) 543
BsrFI RCCGGY 1 cut(s) 78
BsrI ACTGG 3 cut(s) 43, 133, 375
BssAI RCCGGY 1 cut(s) 78
BssMI GATC 2 cut(s) 32, 182
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 3 cut(s) 85, 236, 424
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 2 cut(s) 16, 55
Bst4CI ACNGT 4 cut(s) 208, 262, 459, 527
BstAPI GCANNNNNTGC 1 cut(s) 383
BstC8I GCNNGC 2 cut(s) 60, 554
BstDEI CTNAG 3 cut(s) 219, 347, 356
BstDSI CCRYGG 2 cut(s) 195, 207
BstF5I GGATG 2 cut(s) 367, 477
BstFNI CGCG 3 cut(s) 197, 585, 587
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 2 cut(s) 403, 587
BstKTI GATC 2 cut(s) 35, 185
BstMBI GATC 2 cut(s) 32, 182
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 6 cut(s) 59, 194, 383, 442, 472, 562
BstNI CCWGG 2 cut(s) 16, 55
BstNSI RCATGY 1 cut(s) 313
BstSCI CCNGG 6 cut(s) 14, 53, 90, 387, 388, 446
BstSFI CTRYAG 1 cut(s) 455
BstUI CGCG 3 cut(s) 197, 585, 587
BstV1I GCAGC 3 cut(s) 390, 453, 505
BstV2I GAAGAC 1 cut(s) 39
BstX2I RGATCY 1 cut(s) 182
BstYI RGATCY 1 cut(s) 182
Bsu36I CCTNAGG 1 cut(s) 219
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 6 cut(s) 90, 194, 212, 352, 374, 565
BtgI CCRYGG 2 cut(s) 195, 207
BtgZI GCGATG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 367, 477
Cac8I GCNNGC 2 cut(s) 60, 554
CaiI CAGNNNCTG 1 cut(s) 463
CfoI GCGC 2 cut(s) 403, 587
Cfr10I RCCGGY 1 cut(s) 78
Cfr13I GGNCC 3 cut(s) 120, 258, 544
Cfr42I CCGCGG 1 cut(s) 198
Cfr9I CCCGGG 1 cut(s) 388
Csp6I GTAC 3 cut(s) 40, 82, 241
CspAI ACCGGT 1 cut(s) 78
CviAII CATG 2 cut(s) 286, 310
CviQI GTAC 3 cut(s) 40, 82, 241
DdeI CTNAG 3 cut(s) 219, 347, 356
DpnI GATC 2 cut(s) 34, 184
DpnII GATC 2 cut(s) 32, 182
EaeI YGGCCR 2 cut(s) 210, 372
Eco130I CCWWGG 3 cut(s) 85, 236, 424
Eco147I AGGCCT 1 cut(s) 352
Eco47I GGWCC 3 cut(s) 120, 258, 544
Eco57I CTGAAG 1 cut(s) 338
Eco81I CCTNAGG 1 cut(s) 219
Eco88I CYCGRG 1 cut(s) 388
EcoO109I RGGNCCY 2 cut(s) 120, 544
EcoRII CCWGG 2 cut(s) 14, 53
EcoT14I CCWWGG 3 cut(s) 85, 236, 424
ErhI CCWWGG 3 cut(s) 85, 236, 424
FaeI CATG 2 cut(s) 289, 313
FaiI YATR 8 cut(s) 265, 287, 311, 329, 523, 530, 572, 615
FaqI GGGAC 2 cut(s) 271, 557
FatI CATG 2 cut(s) 285, 309
FauI CCCGC 1 cut(s) 580
FblI GTMKAC 2 cut(s) 96, 306
Fnu4HI GCNGC 7 cut(s) 195, 314, 375, 404, 467, 494, 600
FokI GGATG 2 cut(s) 374, 484
Fsp4HI GCNGC 7 cut(s) 195, 314, 375, 404, 467, 494, 600
FspBI CTAG 3 cut(s) 86, 603, 657
GlaI GCGC 2 cut(s) 402, 586
GluI GCNGC 7 cut(s) 195, 314, 375, 404, 467, 494, 600
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 6 cut(s) 90, 194, 212, 352, 374, 565
HapII CCGG 6 cut(s) 79, 91, 332, 389, 448, 488
HhaI GCGC 2 cut(s) 403, 587
Hin1II CATG 2 cut(s) 289, 313
Hin6I GCGC 2 cut(s) 401, 585
HinP1I GCGC 2 cut(s) 401, 585
HinfI GANTC 3 cut(s) 5, 155, 412
HpaII CCGG 6 cut(s) 79, 91, 332, 389, 448, 488
HphI GGTGA 2 cut(s) 179, 477
Hpy166II GTNNAC 4 cut(s) 97, 243, 253, 307
Hpy188I TCNGA 4 cut(s) 10, 142, 160, 231
Hpy188III TCNNGA 1 cut(s) 218
Hpy8I GTNNAC 4 cut(s) 97, 243, 253, 307
Hpy99I CGWCG 2 cut(s) 40, 164
HpyAV CCTTC 2 cut(s) 289, 576
HpyCH4III ACNGT 4 cut(s) 208, 262, 459, 527
HpyCH4IV ACGT 1 cut(s) 336
HpyCH4V TGCA 1 cut(s) 406
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 194, 383, 442, 472, 562
HpyF3I CTNAG 3 cut(s) 219, 347, 356
HpySE526I ACGT 1 cut(s) 336
Hsp92II CATG 2 cut(s) 289, 313
HspAI GCGC 2 cut(s) 401, 585
KpnI GGTACC 1 cut(s) 85
KspI CCGCGG 1 cut(s) 198
Kzo9I GATC 2 cut(s) 32, 182
LmnI GCTCC 2 cut(s) 423, 490
Lsp1109I GCAGC 3 cut(s) 390, 453, 505
LweI GCATC 1 cut(s) 462
MaeI CTAG 3 cut(s) 86, 603, 657
MaeII ACGT 1 cut(s) 336
MaeIII GTNAC 3 cut(s) 202, 483, 605
MalI GATC 2 cut(s) 34, 184
MboI GATC 2 cut(s) 32, 182
MboII GAAGA 1 cut(s) 39
MflI RGATCY 1 cut(s) 182
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 1 cut(s) 101
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 1 cut(s) 183
MnlI CCTC 8 cut(s) 133, 157, 169, 184, 214, 363, 632, 634
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
MslI CAYNNNNRTG 2 cut(s) 248, 290
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 6 cut(s) 79, 91, 332, 389, 448, 488
MspR9I CCNGG 6 cut(s) 16, 55, 92, 389, 390, 448
Mva1269I GAATGC 2 cut(s) 225, 511
MvaI CCWGG 2 cut(s) 16, 55
MvnI CGCG 3 cut(s) 197, 585, 587
MwoI GCNNNNNNNGC 6 cut(s) 59, 194, 383, 442, 472, 562
NciI CCSGG 4 cut(s) 92, 389, 390, 448
NdeII GATC 2 cut(s) 32, 182
NlaIII CATG 2 cut(s) 289, 313
NlaIV GGNNCC 5 cut(s) 83, 121, 259, 452, 545
NmuCI GTSAC 1 cut(s) 483
NspI RCATGY 1 cut(s) 313
OliI CACNNNNGTG 1 cut(s) 248
PceI AGGCCT 1 cut(s) 352
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PctI GAATGC 2 cut(s) 225, 511
PfeI GAWTC 2 cut(s) 5, 412
PinAI ACCGGT 1 cut(s) 78
PkrI GCNGC 7 cut(s) 196, 315, 376, 405, 468, 495, 601
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PpuMI RGGWCCY 2 cut(s) 120, 544
Psp5II RGGWCCY 2 cut(s) 120, 544
Psp6I CCWGG 2 cut(s) 14, 53
PspGI CCWGG 2 cut(s) 14, 53
PspN4I GGNNCC 5 cut(s) 83, 121, 259, 452, 545
PspPI GGNCC 3 cut(s) 120, 258, 544
PspPPI RGGWCCY 2 cut(s) 120, 544
PstNI CAGNNNCTG 1 cut(s) 463
PsuI RGATCY 1 cut(s) 182
RsaI GTAC 3 cut(s) 41, 83, 242
RsaNI GTAC 3 cut(s) 40, 82, 241
RseI CAYNNNNRTG 2 cut(s) 248, 290
SacII CCGCGG 1 cut(s) 198
SatI GCNGC 7 cut(s) 195, 314, 375, 404, 467, 494, 600
Sau3AI GATC 2 cut(s) 32, 182
Sau96I GGNCC 3 cut(s) 120, 258, 544
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 6 cut(s) 16, 55, 92, 389, 390, 448
SfaNI GCATC 1 cut(s) 462
SfcI CTRYAG 1 cut(s) 455
Sfr303I CCGCGG 1 cut(s) 198
SgrBI CCGCGG 1 cut(s) 198
SinI GGWCC 3 cut(s) 120, 258, 544
SmaI CCCGGG 1 cut(s) 390
SmiMI CAYNNNNRTG 2 cut(s) 248, 290
Sse9I AATT 1 cut(s) 101
SseBI AGGCCT 1 cut(s) 352
SspMI CTAG 3 cut(s) 86, 603, 657
StuI AGGCCT 1 cut(s) 352
StyD4I CCNGG 6 cut(s) 14, 53, 90, 387, 388, 446
StyI CCWWGG 3 cut(s) 85, 236, 424
TaaI ACNGT 4 cut(s) 208, 262, 459, 527
TaiI ACGT 1 cut(s) 339
TaqI TCGA 3 cut(s) 75, 125, 624
TasI AATT 1 cut(s) 101
TauI GCSGC 4 cut(s) 197, 316, 377, 602
TfiI GAWTC 2 cut(s) 5, 412
TseFI GTSAC 1 cut(s) 483
TseI GCWGC 3 cut(s) 403, 466, 493
Tsp45I GTSAC 1 cut(s) 483
TspDTI ATGAA 2 cut(s) 285, 308
TspMI CCCGGG 1 cut(s) 388
VpaK11BI GGWCC 3 cut(s) 120, 258, 544
XceI RCATGY 1 cut(s) 313
XmaI CCCGGG 1 cut(s) 388
XmaJI CCTAGG 1 cut(s) 85
XmiI GTMKAC 2 cut(s) 96, 306
XspI CTAG 3 cut(s) 86, 603, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.